Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88896.t1 | XP_003592060.1 | 97.1 | 175 | 4 | 1 | 1 | 174 | 1 | 175 | 1.70E-68 | 268.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88896.t1 | Q9FEC1 | 67.8 | 174 | 54 | 2 | 1 | 174 | 1 | 172 | 3.3e-36 | 152.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88896.t1 | G7IBV7 | 97.1 | 175 | 4 | 1 | 1 | 174 | 1 | 175 | 1.2e-68 | 268.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene88896 | 0.827625 | 1.41E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene88896 | 0.906114 | 2.10E-80 | -1.69E-46 |
| MS.gene049217 | MS.gene88896 | 0.833279 | 5.84E-56 | -1.69E-46 |
| MS.gene04921 | MS.gene88896 | -0.819147 | 1.35E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene88896 | 0.879863 | 8.80E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene88896 | 0.83721 | 5.95E-57 | -1.69E-46 |
| MS.gene049281 | MS.gene88896 | -0.804121 | 2.51E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene88896 | 0.904141 | 1.67E-79 | -1.69E-46 |
| MS.gene049320 | MS.gene88896 | 0.91004 | 2.92E-82 | -1.69E-46 |
| MS.gene04939 | MS.gene88896 | 0.822655 | 2.11E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene88896 | 0.859665 | 3.53E-63 | -1.69E-46 |
| MS.gene049627 | MS.gene88896 | 0.826344 | 2.86E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene88896 | 0.869916 | 2.16E-66 | -1.69E-46 |
| MS.gene049805 | MS.gene88896 | 0.831454 | 1.65E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene88896 | 0.883348 | 4.84E-71 | -1.69E-46 |
| MS.gene050163 | MS.gene88896 | 0.887612 | 1.22E-72 | -1.69E-46 |
| MS.gene050165 | MS.gene88896 | 0.884218 | 2.31E-71 | -1.69E-46 |
| MS.gene050170 | MS.gene88896 | 0.916907 | 1.01E-85 | -1.69E-46 |
| MS.gene050322 | MS.gene88896 | -0.803754 | 3.00E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene88896 | 0.885845 | 5.72E-72 | -1.69E-46 |
| MS.gene050333 | MS.gene88896 | 0.834817 | 2.41E-56 | -1.69E-46 |
| MS.gene050338 | MS.gene88896 | -0.836871 | 7.26E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene88896 | 0.820508 | 6.61E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene88896 | 0.869393 | 3.20E-66 | -1.69E-46 |
| MS.gene050504 | MS.gene88896 | 0.917935 | 2.89E-86 | -1.69E-46 |
| MS.gene050518 | MS.gene88896 | 0.902902 | 6.02E-79 | -1.69E-46 |
| MS.gene050538 | MS.gene88896 | 0.83986 | 1.23E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene88896 | 0.934401 | 4.28E-96 | -1.69E-46 |
| MS.gene050593 | MS.gene88896 | 0.804684 | 1.92E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene88896 | 0.915191 | 7.89E-85 | -1.69E-46 |
| MS.gene050647 | MS.gene88896 | -0.813339 | 2.69E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene88896 | 0.869193 | 3.72E-66 | -1.69E-46 |
| MS.gene050690 | MS.gene88896 | 0.801249 | 9.84E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene88896 | 0.90724 | 6.28E-81 | -1.69E-46 |
| MS.gene050747 | MS.gene88896 | 0.862052 | 6.66E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene88896 | 0.870028 | 1.99E-66 | -1.69E-46 |
| MS.gene05080 | MS.gene88896 | 0.849725 | 2.69E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene88896 | 0.820886 | 5.41E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene88896 | 0.881083 | 3.22E-70 | -1.69E-46 |
| MS.gene050871 | MS.gene88896 | 0.881401 | 2.48E-70 | -1.69E-46 |
| MS.gene050876 | MS.gene88896 | 0.837815 | 4.16E-57 | -1.69E-46 |
| MS.gene050883 | MS.gene88896 | -0.806344 | 8.61E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene88896 | 0.875339 | 3.33E-68 | -1.69E-46 |
| MS.gene050950 | MS.gene88896 | 0.865595 | 5.27E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene88896 | 0.903055 | 5.15E-79 | -1.69E-46 |
| MS.gene05100 | MS.gene88896 | 0.844674 | 6.53E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene88896 | -0.809467 | 1.87E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene88896 | -0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene88896 | -0.810708 | 1.01E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene88896 | 0.814807 | 1.28E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene88896 | 0.9101 | 2.73E-82 | -1.69E-46 |
| MS.gene051364 | MS.gene88896 | -0.806691 | 7.27E-50 | -1.69E-46 |
| MS.gene051439 | MS.gene88896 | -0.816991 | 4.16E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene88896 | -0.805274 | 1.45E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene88896 | 0.862293 | 5.61E-64 | -1.69E-46 |
| MS.gene051651 | MS.gene88896 | -0.838555 | 2.68E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene88896 | 0.82255 | 2.23E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene88896 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene88896 | 0.849384 | 3.35E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene88896 | 0.85264 | 4.04E-61 | -1.69E-46 |
| MS.gene051973 | MS.gene88896 | -0.804927 | 1.71E-49 | -1.69E-46 |
| MS.gene052015 | MS.gene88896 | -0.815623 | 8.41E-52 | -1.69E-46 |
| MS.gene052129 | MS.gene88896 | -0.829801 | 4.20E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene88896 | 0.878689 | 2.29E-69 | -1.69E-46 |
| MS.gene052482 | MS.gene88896 | 0.872909 | 2.21E-67 | -1.69E-46 |
| MS.gene052486 | MS.gene88896 | 0.87982 | 9.11E-70 | -1.69E-46 |
| MS.gene052494 | MS.gene88896 | -0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene88896 | 0.829179 | 5.95E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene88896 | 0.895717 | 7.35E-76 | -1.69E-46 |
| MS.gene052504 | MS.gene88896 | 0.836866 | 7.28E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene88896 | 0.814853 | 1.25E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene88896 | 0.858079 | 1.05E-62 | -1.69E-46 |
| MS.gene052606 | MS.gene88896 | -0.840058 | 1.09E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene88896 | 0.85717 | 1.96E-62 | -1.69E-46 |
| MS.gene052820 | MS.gene88896 | 0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene88896 | 0.864322 | 1.32E-64 | -1.69E-46 |
| MS.gene052823 | MS.gene88896 | 0.896628 | 3.07E-76 | -1.69E-46 |
| MS.gene052825 | MS.gene88896 | 0.893389 | 6.58E-75 | -1.69E-46 |
| MS.gene052872 | MS.gene88896 | 0.826704 | 2.34E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene88896 | 0.84817 | 7.27E-60 | -1.69E-46 |
| MS.gene052986 | MS.gene88896 | 0.808469 | 3.05E-50 | -1.69E-46 |
| MS.gene052987 | MS.gene88896 | 0.810478 | 1.13E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene88896 | -0.808355 | 3.23E-50 | -1.69E-46 |
| MS.gene053117 | MS.gene88896 | 0.828934 | 6.82E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene88896 | 0.892891 | 1.04E-74 | -1.69E-46 |
| MS.gene053207 | MS.gene88896 | 0.821262 | 4.43E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene88896 | 0.884036 | 2.70E-71 | -1.69E-46 |
| MS.gene053284 | MS.gene88896 | 0.806468 | 8.11E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene88896 | 0.886666 | 2.80E-72 | -1.69E-46 |
| MS.gene053420 | MS.gene88896 | -0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene88896 | -0.81609 | 6.62E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene88896 | 0.853695 | 2.02E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene88896 | 0.880015 | 7.77E-70 | -1.69E-46 |
| MS.gene053480 | MS.gene88896 | 0.881082 | 3.22E-70 | -1.69E-46 |
| MS.gene053549 | MS.gene88896 | -0.805352 | 1.39E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene88896 | 0.855824 | 4.87E-62 | -1.69E-46 |
| MS.gene053579 | MS.gene88896 | 0.822322 | 2.52E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene88896 | 0.825913 | 3.62E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene88896 | 0.849565 | 2.98E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene88896 | 0.866131 | 3.57E-65 | -1.69E-46 |
| MS.gene053916 | MS.gene88896 | 0.829624 | 4.64E-55 | -1.69E-46 |
| MS.gene054270 | MS.gene88896 | -0.812605 | 3.90E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene88896 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene88896 | 0.813593 | 2.37E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene88896 | 0.864676 | 1.02E-64 | -1.69E-46 |
| MS.gene054595 | MS.gene88896 | 0.85997 | 2.86E-63 | -1.69E-46 |
| MS.gene054600 | MS.gene88896 | 0.860059 | 2.69E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene88896 | 0.88343 | 4.52E-71 | -1.69E-46 |
| MS.gene054706 | MS.gene88896 | -0.850968 | 1.20E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene88896 | 0.940289 | 3.01E-100 | -1.69E-46 |
| MS.gene054851 | MS.gene88896 | -0.818131 | 2.30E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene88896 | -0.826823 | 2.20E-54 | -1.69E-46 |
| MS.gene054927 | MS.gene88896 | 0.810985 | 8.78E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene88896 | 0.910509 | 1.73E-82 | -1.69E-46 |
| MS.gene055154 | MS.gene88896 | -0.802703 | 4.95E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene88896 | 0.818496 | 1.90E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene88896 | 0.846637 | 1.92E-59 | -1.69E-46 |
| MS.gene055251 | MS.gene88896 | -0.817952 | 2.53E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene88896 | 0.812192 | 4.80E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene88896 | 0.903985 | 1.97E-79 | -1.69E-46 |
| MS.gene055502 | MS.gene88896 | 0.900167 | 9.60E-78 | -1.69E-46 |
| MS.gene055577 | MS.gene88896 | 0.897206 | 1.76E-76 | -1.69E-46 |
| MS.gene055629 | MS.gene88896 | 0.838975 | 2.09E-57 | -1.69E-46 |
| MS.gene055731 | MS.gene88896 | -0.808533 | 2.96E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene88896 | 0.903092 | 4.95E-79 | -1.69E-46 |
| MS.gene055750 | MS.gene88896 | 0.880484 | 5.29E-70 | -1.69E-46 |
| MS.gene055751 | MS.gene88896 | 0.900065 | 1.06E-77 | -1.69E-46 |
| MS.gene055776 | MS.gene88896 | 0.855951 | 4.47E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene88896 | 0.917196 | 7.13E-86 | -1.69E-46 |
| MS.gene055941 | MS.gene88896 | 0.843017 | 1.81E-58 | -1.69E-46 |
| MS.gene056040 | MS.gene88896 | 0.821454 | 4.00E-53 | -1.69E-46 |
| MS.gene056046 | MS.gene88896 | 0.830402 | 3.00E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene88896 | 0.80411 | 2.53E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene88896 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene056218 | MS.gene88896 | -0.802171 | 6.37E-49 | -1.69E-46 |
| MS.gene056266 | MS.gene88896 | 0.822399 | 2.42E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene88896 | 0.84694 | 1.58E-59 | -1.69E-46 |
| MS.gene056387 | MS.gene88896 | 0.845063 | 5.13E-59 | -1.69E-46 |
| MS.gene056409 | MS.gene88896 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene056446 | MS.gene88896 | 0.807505 | 4.89E-50 | -1.69E-46 |
| MS.gene056450 | MS.gene88896 | 0.803774 | 2.97E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene88896 | 0.917347 | 5.93E-86 | -1.69E-46 |
| MS.gene056510 | MS.gene88896 | 0.879742 | 9.72E-70 | -1.69E-46 |
| MS.gene056550 | MS.gene88896 | -0.834914 | 2.28E-56 | -1.69E-46 |
| MS.gene056590 | MS.gene88896 | -0.829672 | 4.52E-55 | -1.69E-46 |
| MS.gene056591 | MS.gene88896 | -0.830968 | 2.18E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene88896 | 0.844476 | 7.38E-59 | -1.69E-46 |
| MS.gene056618 | MS.gene88896 | -0.81069 | 1.02E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene88896 | 0.896061 | 5.29E-76 | -1.69E-46 |
| MS.gene056692 | MS.gene88896 | 0.902577 | 8.41E-79 | -1.69E-46 |
| MS.gene056694 | MS.gene88896 | -0.86692 | 2.00E-65 | -1.69E-46 |
| MS.gene056697 | MS.gene88896 | -0.814332 | 1.63E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene88896 | -0.821608 | 3.69E-53 | -1.69E-46 |
| MS.gene056898 | MS.gene88896 | 0.845005 | 5.32E-59 | -1.69E-46 |
| MS.gene056988 | MS.gene88896 | -0.800883 | 1.17E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene88896 | 0.816325 | 5.86E-52 | -1.69E-46 |
| MS.gene057086 | MS.gene88896 | 0.814863 | 1.24E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene88896 | 0.806937 | 6.45E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene88896 | 0.826227 | 3.05E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene88896 | 0.850811 | 1.33E-60 | -1.69E-46 |
| MS.gene05753 | MS.gene88896 | 0.811914 | 5.52E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene88896 | 0.8864 | 3.53E-72 | -1.69E-46 |
| MS.gene057768 | MS.gene88896 | -0.80918 | 2.15E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene88896 | 0.881603 | 2.09E-70 | -1.69E-46 |
| MS.gene057856 | MS.gene88896 | 0.808708 | 2.71E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene88896 | 0.800357 | 1.50E-48 | -1.69E-46 |
| MS.gene05787 | MS.gene88896 | 0.843362 | 1.47E-58 | -1.69E-46 |
| MS.gene058117 | MS.gene88896 | -0.801341 | 9.42E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene88896 | 0.803389 | 3.57E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene88896 | 0.822593 | 2.18E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene88896 | -0.87961 | 1.08E-69 | -1.69E-46 |
| MS.gene058338 | MS.gene88896 | 0.82519 | 5.36E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene88896 | 0.875015 | 4.30E-68 | -1.69E-46 |
| MS.gene058382 | MS.gene88896 | -0.814141 | 1.79E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene88896 | 0.911263 | 7.41E-83 | -1.69E-46 |
| MS.gene058544 | MS.gene88896 | 0.912723 | 1.41E-83 | -1.69E-46 |
| MS.gene058723 | MS.gene88896 | 0.827816 | 1.27E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene88896 | 0.865388 | 6.12E-65 | -1.69E-46 |
| MS.gene058838 | MS.gene88896 | 0.901604 | 2.27E-78 | -1.69E-46 |
| MS.gene05883 | MS.gene88896 | 0.821272 | 4.41E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene88896 | 0.899825 | 1.35E-77 | -1.69E-46 |
| MS.gene059023 | MS.gene88896 | 0.908635 | 1.38E-81 | -1.69E-46 |
| MS.gene059103 | MS.gene88896 | -0.84081 | 6.95E-58 | -1.69E-46 |
| MS.gene05914 | MS.gene88896 | 0.864084 | 1.57E-64 | -1.69E-46 |
| MS.gene05926 | MS.gene88896 | -0.811383 | 7.19E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene88896 | 0.823541 | 1.31E-53 | -1.69E-46 |
| MS.gene059480 | MS.gene88896 | -0.838987 | 2.07E-57 | -1.69E-46 |
| MS.gene059526 | MS.gene88896 | -0.827912 | 1.20E-54 | -1.69E-46 |
| MS.gene05960 | MS.gene88896 | -0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene88896 | 0.847785 | 9.29E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene88896 | 0.918076 | 2.43E-86 | -1.69E-46 |
| MS.gene059703 | MS.gene88896 | -0.800148 | 1.65E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene88896 | 0.884977 | 1.21E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene88896 | 0.874214 | 8.04E-68 | -1.69E-46 |
| MS.gene059770 | MS.gene88896 | -0.812871 | 3.41E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene88896 | 0.84238 | 2.68E-58 | -1.69E-46 |
| MS.gene059837 | MS.gene88896 | 0.851766 | 7.17E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene88896 | 0.902347 | 1.06E-78 | -1.69E-46 |
| MS.gene059953 | MS.gene88896 | -0.800578 | 1.35E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene88896 | 0.88195 | 1.57E-70 | -1.69E-46 |
| MS.gene06027 | MS.gene88896 | 0.836976 | 6.82E-57 | -1.69E-46 |
| MS.gene060595 | MS.gene88896 | -0.823081 | 1.68E-53 | -1.69E-46 |
| MS.gene060694 | MS.gene88896 | -0.804468 | 2.13E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene88896 | 0.85783 | 1.25E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene88896 | 0.908261 | 2.07E-81 | -1.69E-46 |
| MS.gene060778 | MS.gene88896 | 0.856614 | 2.86E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene88896 | 0.926322 | 5.50E-91 | -1.69E-46 |
| MS.gene060823 | MS.gene88896 | -0.827017 | 1.97E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene88896 | 0.813195 | 2.89E-51 | -1.69E-46 |
| MS.gene06084 | MS.gene88896 | -0.824691 | 7.04E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene88896 | 0.876648 | 1.18E-68 | -1.69E-46 |
| MS.gene060982 | MS.gene88896 | 0.933662 | 1.33E-95 | -1.69E-46 |
| MS.gene061044 | MS.gene88896 | -0.867493 | 1.31E-65 | -1.69E-46 |
| MS.gene061150 | MS.gene88896 | 0.888208 | 7.24E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88896.t1 | MTR_1g098280 | 97.714 | 175 | 3 | 1 | 1 | 174 | 1 | 175 | 4.58e-122 | 341 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88896.t1 | AT1G34000 | 65.909 | 176 | 54 | 5 | 1 | 174 | 1 | 172 | 4.76e-55 | 172 |
Find 32 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATCCTTCTCTCGAATTT+TGG | 0.108201 | 1.1:+70673161 | MS.gene88896:CDS |
| CAGAAGCCAAGTTCTGTTAT+TGG | 0.242057 | 1.1:+70671462 | MS.gene88896:CDS |
| TCCATTGCTAATCTCATTCT+TGG | 0.259463 | 1.1:-70671607 | None:intergenic |
| AGCTTTATGCTGTTACTATA+AGG | 0.314703 | 1.1:+70671325 | MS.gene88896:CDS |
| TTCTTCAGATGGGCAATGTT+TGG | 0.321634 | 1.1:+70673080 | MS.gene88896:intron |
| AAAGGTTGAGGAAGATTAGA+TGG | 0.381685 | 1.1:-70671402 | None:intergenic |
| GGCTTCTGTGGTTGTGGAGG+AGG | 0.386924 | 1.1:-70671447 | None:intergenic |
| GAGGAAGATGAATGAGTTGT+TGG | 0.427102 | 1.1:-70671258 | None:intergenic |
| GTCTGAGCCCGTTGCAAACT+CGG | 0.430085 | 1.1:-70673123 | None:intergenic |
| GGTGAAGGTTTCAAAGGTTG+AGG | 0.438534 | 1.1:-70671414 | None:intergenic |
| TCATCTCCAATAACAGAACT+TGG | 0.445908 | 1.1:-70671468 | None:intergenic |
| AGGAAGATGAATGAGTTGTT+GGG | 0.449866 | 1.1:-70671257 | None:intergenic |
| GAACTTGGCTTCTGTGGTTG+TGG | 0.451217 | 1.1:-70671453 | None:intergenic |
| TTGCTAACCGAGTTTGCAAC+GGG | 0.454057 | 1.1:+70673116 | MS.gene88896:CDS |
| GGAGGCTGAGAAGGAGGTGA+AGG | 0.470690 | 1.1:-70671429 | None:intergenic |
| ATAAGGAATGTTCAGAATGA+TGG | 0.482112 | 1.1:+70671342 | MS.gene88896:CDS |
| AGATGAAGTTGAACATGAAG+AGG | 0.502915 | 1.1:-70671277 | None:intergenic |
| CTTGAACAAGCTGCAGATCA+AGG | 0.507475 | 1.1:+70671564 | MS.gene88896:CDS |
| CTTGGCTTCTGTGGTTGTGG+AGG | 0.510538 | 1.1:-70671450 | None:intergenic |
| TATAGTAACAGCATAAAGCT+TGG | 0.513051 | 1.1:-70671322 | None:intergenic |
| ATAACAGAACTTGGCTTCTG+TGG | 0.527549 | 1.1:-70671459 | None:intergenic |
| TGTGGAGGAGGCTGAGAAGG+AGG | 0.535122 | 1.1:-70671435 | None:intergenic |
| TTAGATGGTTCTTTCACAGA+AGG | 0.540411 | 1.1:-70671387 | None:intergenic |
| TCTTTCACAGAAGGAGCCGC+TGG | 0.542093 | 1.1:-70671378 | None:intergenic |
| GGTTGTGGAGGAGGCTGAGA+AGG | 0.543573 | 1.1:-70671438 | None:intergenic |
| GTTGCTAACCGAGTTTGCAA+CGG | 0.550254 | 1.1:+70673115 | MS.gene88896:CDS |
| CTATCCCAAAATTCGAGAGA+AGG | 0.568832 | 1.1:-70673166 | None:intergenic |
| GAAGGAGGTGAAGGTTTCAA+AGG | 0.586451 | 1.1:-70671420 | None:intergenic |
| GCCAAGAATGAGATTAGCAA+TGG | 0.587710 | 1.1:+70671606 | MS.gene88896:CDS |
| AGAATGAGATTAGCAATGGA+AGG | 0.602777 | 1.1:+70671610 | MS.gene88896:CDS |
| GGAGCCGCTGGTCTTCTGAG+AGG | 0.691891 | 1.1:-70671366 | None:intergenic |
| TGGTCCTCTCAGAAGACCAG+CGG | 0.739227 | 1.1:+70671362 | MS.gene88896:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAATTAATATTTAAGAA+AGG | - | chr1.1:70671691-70671710 | None:intergenic | 10.0% |
| !!! | AATTACAAATTATTTTCATT+TGG | + | chr1.1:70672503-70672522 | MS.gene88896:intron | 10.0% |
| !!! | ATTACAAATTATTTTCATTT+GGG | + | chr1.1:70672504-70672523 | MS.gene88896:intron | 10.0% |
| !!! | TTTAAAATGTAAAATCATTA+CGG | - | chr1.1:70673043-70673062 | None:intergenic | 10.0% |
| !!! | TTTATTTTATCATTTGTTAT+AGG | + | chr1.1:70671911-70671930 | MS.gene88896:intron | 10.0% |
| !! | ATGATTAAAGCAATAAATTT+GGG | - | chr1.1:70672136-70672155 | None:intergenic | 15.0% |
| !!! | AATTCTTTCTATTTTTGATT+TGG | + | chr1.1:70671647-70671666 | MS.gene88896:intron | 15.0% |
| !!! | ATTCTTTCTATTTTTGATTT+GGG | + | chr1.1:70671648-70671667 | MS.gene88896:intron | 15.0% |
| !! | CATGATTAAAGCAATAAATT+TGG | - | chr1.1:70672137-70672156 | None:intergenic | 20.0% |
| !!! | TGTGCTTTTATATATGAATA+TGG | + | chr1.1:70672985-70673004 | MS.gene88896:intron | 20.0% |
| !!! | TTCTTTCTATTTTTGATTTG+GGG | + | chr1.1:70671649-70671668 | MS.gene88896:intron | 20.0% |
| ! | AATTCAAATTACAGTGTGTT+GGG | - | chr1.1:70672480-70672499 | None:intergenic | 25.0% |
| ! | ATTGATCAGATTTACAATTC+TGG | - | chr1.1:70672665-70672684 | None:intergenic | 25.0% |
| ! | GTATTATCTCTTGTTCAAAA+TGG | + | chr1.1:70672752-70672771 | MS.gene88896:intron | 25.0% |
| ! | TAAAACATTCCAACTAATGT+AGG | + | chr1.1:70672345-70672364 | MS.gene88896:intron | 25.0% |
| ! | TAATTCAAATTACAGTGTGT+TGG | - | chr1.1:70672481-70672500 | None:intergenic | 25.0% |
| ! | TGATTGTGTTATCTTTATGT+TGG | + | chr1.1:70671718-70671737 | MS.gene88896:intron | 25.0% |
| !! | ACCAAACTTTTTGTCATTAA+GGG | - | chr1.1:70672301-70672320 | None:intergenic | 25.0% |
| !! | ATCAAGATGATTAAAGCATT+TGG | - | chr1.1:70672202-70672221 | None:intergenic | 25.0% |
| !! | TAAAAGCACATTAGAAACAA+AGG | - | chr1.1:70672975-70672994 | None:intergenic | 25.0% |
| !! | TCAAGATGATTAAAGCATTT+GGG | - | chr1.1:70672201-70672220 | None:intergenic | 25.0% |
| !! | TCATGATGTTATTGATTGAA+CGG | + | chr1.1:70672052-70672071 | MS.gene88896:intron | 25.0% |
| !! | TGCTTTAATCATCTTGATTT+TGG | + | chr1.1:70672204-70672223 | MS.gene88896:intron | 25.0% |
| !!! | AAGAACTAGTTAGGTTTTTT+TGG | + | chr1.1:70671744-70671763 | MS.gene88896:intron | 25.0% |
| ATAAGGAATGTTCAGAATGA+TGG | + | chr1.1:70671342-70671361 | MS.gene88896:CDS | 30.0% | |
| ATCTGATCAATAAGTACATG+CGG | + | chr1.1:70672674-70672693 | MS.gene88896:intron | 30.0% | |
| ATTCAAATTACAGTGTGTTG+GGG | - | chr1.1:70672479-70672498 | None:intergenic | 30.0% | |
| TATAGTAACAGCATAAAGCT+TGG | - | chr1.1:70671325-70671344 | None:intergenic | 30.0% | |
| TCCAGCAAACAGTAATTAAT+TGG | + | chr1.1:70672625-70672644 | MS.gene88896:intron | 30.0% | |
| TCTATCACTATCAAAACTAC+AGG | - | chr1.1:70672230-70672249 | None:intergenic | 30.0% | |
| TTGGCAATGAATCCAAAAAA+GGG | - | chr1.1:70671591-70671610 | None:intergenic | 30.0% | |
| ! | AGCTTTATGCTGTTACTATA+AGG | + | chr1.1:70671325-70671344 | MS.gene88896:CDS | 30.0% |
| ! | ATTCTTGTTTCTTCTTCAGA+TGG | + | chr1.1:70673069-70673088 | MS.gene88896:intron | 30.0% |
| ! | CACCAAACTTTTTGTCATTA+AGG | - | chr1.1:70672302-70672321 | None:intergenic | 30.0% |
| ! | CCAAACTTTTTGTCATTAAG+GGG | - | chr1.1:70672300-70672319 | None:intergenic | 30.0% |
| ! | TTCTTGTTTCTTCTTCAGAT+GGG | + | chr1.1:70673070-70673089 | MS.gene88896:intron | 30.0% |
| !! | AGTTAACTTGTTTGTCCAAT+TGG | + | chr1.1:70671986-70672005 | MS.gene88896:intron | 30.0% |
| !!! | GAATTTTGGGATAGTAGATT+TGG | + | chr1.1:70673175-70673194 | MS.gene88896:CDS | 30.0% |
| !!! | TGTAGTTTTGATAGTGATAG+AGG | + | chr1.1:70672229-70672248 | MS.gene88896:intron | 30.0% |
| AAAGGTTGAGGAAGATTAGA+TGG | - | chr1.1:70671405-70671424 | None:intergenic | 35.0% | |
| AAATGGATACTAGAGTAACG+TGG | + | chr1.1:70672769-70672788 | MS.gene88896:intron | 35.0% | |
| AATAAGCGAAAAACAGCTCA+AGG | - | chr1.1:70671844-70671863 | None:intergenic | 35.0% | |
| AATGTAGGACTAGATTGTGT+TGG | + | chr1.1:70672360-70672379 | MS.gene88896:intron | 35.0% | |
| ACAAAAAGCTAAGGAATTGC+AGG | + | chr1.1:70671521-70671540 | MS.gene88896:CDS | 35.0% | |
| AGAATGAGATTAGCAATGGA+AGG | + | chr1.1:70671610-70671629 | MS.gene88896:CDS | 35.0% | |
| AGATGAAGTTGAACATGAAG+AGG | - | chr1.1:70671280-70671299 | None:intergenic | 35.0% | |
| AGGAAGATGAATGAGTTGTT+GGG | - | chr1.1:70671260-70671279 | None:intergenic | 35.0% | |
| CAATCTAGTCCTACATTAGT+TGG | - | chr1.1:70672357-70672376 | None:intergenic | 35.0% | |
| CCCCTTAATGACAAAAAGTT+TGG | + | chr1.1:70672297-70672316 | MS.gene88896:intron | 35.0% | |
| CTTGGCAATGAATCCAAAAA+AGG | - | chr1.1:70671592-70671611 | None:intergenic | 35.0% | |
| GAGACTCAAAACTAACTAAC+TGG | - | chr1.1:70672016-70672035 | None:intergenic | 35.0% | |
| GCCAATTAATTACTGTTTGC+TGG | - | chr1.1:70672629-70672648 | None:intergenic | 35.0% | |
| GTTTCAGAGACAAAAAGCTA+AGG | + | chr1.1:70671512-70671531 | MS.gene88896:CDS | 35.0% | |
| TAAAGTTGAACTGTTTCCCT+AGG | - | chr1.1:70671895-70671914 | None:intergenic | 35.0% | |
| TATGACAGTAGAAACCTTCA+AGG | + | chr1.1:70672575-70672594 | MS.gene88896:intron | 35.0% | |
| TCAACAAGATTGCTTCTGTA+TGG | - | chr1.1:70672531-70672550 | None:intergenic | 35.0% | |
| TCATCTCCAATAACAGAACT+TGG | - | chr1.1:70671471-70671490 | None:intergenic | 35.0% | |
| TCCATTGCTAATCTCATTCT+TGG | - | chr1.1:70671610-70671629 | None:intergenic | 35.0% | |
| TTAGATGGTTCTTTCACAGA+AGG | - | chr1.1:70671390-70671409 | None:intergenic | 35.0% | |
| TTGAAGGTTTCTACTGTCAT+AGG | - | chr1.1:70672576-70672595 | None:intergenic | 35.0% | |
| ! | AACTTTTTGTCATTAAGGGG+AGG | - | chr1.1:70672297-70672316 | None:intergenic | 35.0% |
| ! | AAGATCCTTCTCTCGAATTT+TGG | + | chr1.1:70673161-70673180 | MS.gene88896:CDS | 35.0% |
| ! | AGATCCTTCTCTCGAATTTT+GGG | + | chr1.1:70673162-70673181 | MS.gene88896:CDS | 35.0% |
| ! | CTTAAATTAGTCTGCCTTGA+AGG | - | chr1.1:70672592-70672611 | None:intergenic | 35.0% |
| ! | TAACTAACTGGTTCTCCAAT+TGG | - | chr1.1:70672004-70672023 | None:intergenic | 35.0% |
| ! | TAGTTCTACGTTGATTAGAG+AGG | + | chr1.1:70672401-70672420 | MS.gene88896:intron | 35.0% |
| ! | TGTTGGTAGAAGAACTAGTT+AGG | + | chr1.1:70671735-70671754 | MS.gene88896:intron | 35.0% |
| ! | TTTGGTAAAAGGTGCATTGA+GGG | - | chr1.1:70672885-70672904 | None:intergenic | 35.0% |
| !! | GATTTGGGGTTGATATAAGT+TGG | + | chr1.1:70671663-70671682 | MS.gene88896:intron | 35.0% |
| !! | TTGTTGGGATTTTGATGCAT+GGG | - | chr1.1:70671245-70671264 | None:intergenic | 35.0% |
| !!! | CAATGTTTGGTTTTGCTGTT+GGG | + | chr1.1:70673093-70673112 | MS.gene88896:CDS | 35.0% |
| !!! | TAGTTAGTTTTGAGTCTCTG+TGG | + | chr1.1:70672018-70672037 | MS.gene88896:intron | 35.0% |
| !!! | TCAAGTGATGTGGGATTTTT+TGG | - | chr1.1:70672816-70672835 | None:intergenic | 35.0% |
| AATCTGTATCAGTTACGCTG+TGG | + | chr1.1:70672075-70672094 | MS.gene88896:intron | 40.0% | |
| ACTGTCATAGGAAAGCTCTA+AGG | - | chr1.1:70672564-70672583 | None:intergenic | 40.0% | |
| ATAACAGAACTTGGCTTCTG+TGG | - | chr1.1:70671462-70671481 | None:intergenic | 40.0% | |
| CAGAAGCCAAGTTCTGTTAT+TGG | + | chr1.1:70671462-70671481 | MS.gene88896:CDS | 40.0% | |
| CGACTTTGTCCTTTGGTAAA+AGG | - | chr1.1:70672896-70672915 | None:intergenic | 40.0% | |
| CTATCCCAAAATTCGAGAGA+AGG | - | chr1.1:70673169-70673188 | None:intergenic | 40.0% | |
| GAGGAAGATGAATGAGTTGT+TGG | - | chr1.1:70671261-70671280 | None:intergenic | 40.0% | |
| GATACTAGAGTAACGTGGAA+TGG | + | chr1.1:70672774-70672793 | MS.gene88896:intron | 40.0% | |
| GCCAAGAATGAGATTAGCAA+TGG | + | chr1.1:70671606-70671625 | MS.gene88896:CDS | 40.0% | |
| GCTCAAAACCGACATTATCT+CGG | + | chr1.1:70672932-70672951 | MS.gene88896:intron | 40.0% | |
| GGAGAGTTGGAAGTAACAAA+GGG | - | chr1.1:70672448-70672467 | None:intergenic | 40.0% | |
| TTCTTCAGATGGGCAATGTT+TGG | + | chr1.1:70673080-70673099 | MS.gene88896:intron | 40.0% | |
| TTTGTCATTAAGGGGAGGAA+GGG | - | chr1.1:70672292-70672311 | None:intergenic | 40.0% | |
| ! | CTCAATGCACCTTTTACCAA+AGG | + | chr1.1:70672884-70672903 | MS.gene88896:intron | 40.0% |
| ! | CTTTGGTAAAAGGTGCATTG+AGG | - | chr1.1:70672886-70672905 | None:intergenic | 40.0% |
| ! | TTTTGTCATTAAGGGGAGGA+AGG | - | chr1.1:70672293-70672312 | None:intergenic | 40.0% |
| !! | GTTGTTGGGATTTTGATGCA+TGG | - | chr1.1:70671246-70671265 | None:intergenic | 40.0% |
| !!! | AGTGATGTGGGATTTTTTGG+TGG | - | chr1.1:70672813-70672832 | None:intergenic | 40.0% |
| !!! | GCAATGTTTGGTTTTGCTGT+TGG | + | chr1.1:70673092-70673111 | MS.gene88896:CDS | 40.0% |
| CCGACATTATCTCGGAAAAG+CGG | + | chr1.1:70672940-70672959 | MS.gene88896:intron | 45.0% | |
| CCTAGAGGCTAGAAAGCTTA+TGG | - | chr1.1:70671868-70671887 | None:intergenic | 45.0% | |
| CCTCGATTCTCAAGTGATGT+GGG | - | chr1.1:70672825-70672844 | None:intergenic | 45.0% | |
| CTTGAACAAGCTGCAGATCA+AGG | + | chr1.1:70671564-70671583 | MS.gene88896:CDS | 45.0% | |
| GAAGGAGGTGAAGGTTTCAA+AGG | - | chr1.1:70671423-70671442 | None:intergenic | 45.0% | |
| GGAGCTAAATGTCAGAGTAC+TGG | + | chr1.1:70672422-70672441 | MS.gene88896:intron | 45.0% | |
| GGGAGAGTTGGAAGTAACAA+AGG | - | chr1.1:70672449-70672468 | None:intergenic | 45.0% | |
| GGTGAAGGTTTCAAAGGTTG+AGG | - | chr1.1:70671417-70671436 | None:intergenic | 45.0% | |
| GTTGCTAACCGAGTTTGCAA+CGG | + | chr1.1:70673115-70673134 | MS.gene88896:CDS | 45.0% | |
| GTTTCCCTAGGTTATCCTAG+AGG | - | chr1.1:70671883-70671902 | None:intergenic | 45.0% | |
| TTGCTAACCGAGTTTGCAAC+GGG | + | chr1.1:70673116-70673135 | MS.gene88896:CDS | 45.0% | |
| ! | CCATAAGCTTTCTAGCCTCT+AGG | + | chr1.1:70671865-70671884 | MS.gene88896:intron | 45.0% |
| !! | CCGCTTTTCCGAGATAATGT+CGG | - | chr1.1:70672943-70672962 | None:intergenic | 45.0% |
| !! | CTAGCCTCTAGGATAACCTA+GGG | + | chr1.1:70671876-70671895 | MS.gene88896:intron | 45.0% |
| !! | TCTAGCCTCTAGGATAACCT+AGG | + | chr1.1:70671875-70671894 | MS.gene88896:intron | 45.0% |
| !!! | GCAGATCAAGGTCCCTTTTT+TGG | + | chr1.1:70671576-70671595 | MS.gene88896:CDS | 45.0% |
| CCCACATCACTTGAGAATCG+AGG | + | chr1.1:70672822-70672841 | MS.gene88896:intron | 50.0% | |
| GAACTTGGCTTCTGTGGTTG+TGG | - | chr1.1:70671456-70671475 | None:intergenic | 50.0% | |
| GCACTCACGACTTTGTCCTT+TGG | - | chr1.1:70672903-70672922 | None:intergenic | 50.0% | |
| GCCTCGATTCTCAAGTGATG+TGG | - | chr1.1:70672826-70672845 | None:intergenic | 50.0% | |
| !! | AAGTCGTGAGTGCTGACACA+AGG | + | chr1.1:70672910-70672929 | MS.gene88896:intron | 50.0% |
| ACAGTGTGTTGGGGAGTCTG+AGG | - | chr1.1:70672470-70672489 | None:intergenic | 55.0% | |
| CAGTGTGTTGGGGAGTCTGA+GGG | - | chr1.1:70672469-70672488 | None:intergenic | 55.0% | |
| CTTGGCTTCTGTGGTTGTGG+AGG | - | chr1.1:70671453-70671472 | None:intergenic | 55.0% | |
| GTCTGAGCCCGTTGCAAACT+CGG | - | chr1.1:70673126-70673145 | None:intergenic | 55.0% | |
| TCTTTCACAGAAGGAGCCGC+TGG | - | chr1.1:70671381-70671400 | None:intergenic | 55.0% | |
| TGGTCCTCTCAGAAGACCAG+CGG | + | chr1.1:70671362-70671381 | MS.gene88896:CDS | 55.0% | |
| GGAGGCTGAGAAGGAGGTGA+AGG | - | chr1.1:70671432-70671451 | None:intergenic | 60.0% | |
| GGCTTCTGTGGTTGTGGAGG+AGG | - | chr1.1:70671450-70671469 | None:intergenic | 60.0% | |
| GGTTGTGGAGGAGGCTGAGA+AGG | - | chr1.1:70671441-70671460 | None:intergenic | 60.0% | |
| TGGGGAGTCTGAGGGAGAGT+TGG | - | chr1.1:70672461-70672480 | None:intergenic | 60.0% | |
| TGTGGAGGAGGCTGAGAAGG+AGG | - | chr1.1:70671438-70671457 | None:intergenic | 60.0% | |
| !! | GGAGCCGCTGGTCTTCTGAG+AGG | - | chr1.1:70671369-70671388 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 70671222 | 70673202 | 70671222 | ID=MS.gene88896 |
| chr1.1 | mRNA | 70671222 | 70673202 | 70671222 | ID=MS.gene88896.t1;Parent=MS.gene88896 |
| chr1.1 | exon | 70671222 | 70671631 | 70671222 | ID=MS.gene88896.t1.exon1;Parent=MS.gene88896.t1 |
| chr1.1 | CDS | 70671222 | 70671631 | 70671222 | ID=cds.MS.gene88896.t1;Parent=MS.gene88896.t1 |
| chr1.1 | exon | 70673088 | 70673202 | 70673088 | ID=MS.gene88896.t1.exon2;Parent=MS.gene88896.t1 |
| chr1.1 | CDS | 70673088 | 70673202 | 70673088 | ID=cds.MS.gene88896.t1;Parent=MS.gene88896.t1 |
| Gene Sequence |
| Protein sequence |
