Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066030.t1 | XP_003590829.1 | 97.1 | 276 | 8 | 0 | 1 | 276 | 1 | 276 | 1.00E-147 | 532.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066030.t1 | Q9LW57 | 58.1 | 267 | 106 | 1 | 10 | 276 | 24 | 284 | 1.6e-85 | 317.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066030.t1 | G7I4U4 | 97.1 | 276 | 8 | 0 | 1 | 276 | 1 | 276 | 7.2e-148 | 532.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene066030 | 0.902208 | 1.23E-78 | -1.69E-46 |
| MS.gene049217 | MS.gene066030 | 0.809935 | 1.48E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene066030 | 0.875897 | 2.14E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene066030 | 0.863014 | 3.37E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene066030 | 0.880757 | 4.22E-70 | -1.69E-46 |
| MS.gene049320 | MS.gene066030 | 0.875513 | 2.90E-68 | -1.69E-46 |
| MS.gene049609 | MS.gene066030 | 0.848551 | 5.70E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene066030 | 0.8928 | 1.14E-74 | -1.69E-46 |
| MS.gene049657 | MS.gene066030 | 0.805836 | 1.10E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene066030 | 0.826787 | 2.24E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene066030 | 0.877865 | 4.46E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene066030 | 0.81986 | 9.30E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene066030 | 0.825987 | 3.47E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene066030 | 0.94641 | 4.87E-105 | -1.69E-46 |
| MS.gene050216 | MS.gene066030 | 0.801758 | 7.74E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene066030 | 0.925818 | 1.10E-90 | -1.69E-46 |
| MS.gene050333 | MS.gene066030 | 0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene066030 | -0.830948 | 2.20E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene066030 | 0.821194 | 4.60E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene066030 | 0.893371 | 6.69E-75 | -1.69E-46 |
| MS.gene050502 | MS.gene066030 | 0.817054 | 4.02E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene066030 | 0.884747 | 1.47E-71 | -1.69E-46 |
| MS.gene050518 | MS.gene066030 | 0.870724 | 1.18E-66 | -1.69E-46 |
| MS.gene050538 | MS.gene066030 | 0.815281 | 1.00E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene066030 | 0.899193 | 2.52E-77 | -1.69E-46 |
| MS.gene050612 | MS.gene066030 | 0.881586 | 2.12E-70 | -1.69E-46 |
| MS.gene050675 | MS.gene066030 | 0.853921 | 1.74E-61 | -1.69E-46 |
| MS.gene050697 | MS.gene066030 | 0.854463 | 1.21E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene066030 | 0.875775 | 2.36E-68 | -1.69E-46 |
| MS.gene050747 | MS.gene066030 | 0.846994 | 1.53E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene066030 | 0.859847 | 3.12E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene066030 | 0.874574 | 6.07E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene066030 | 0.854135 | 1.51E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene066030 | 0.893925 | 3.99E-75 | -1.69E-46 |
| MS.gene050871 | MS.gene066030 | 0.890757 | 7.38E-74 | -1.69E-46 |
| MS.gene050876 | MS.gene066030 | 0.816444 | 5.51E-52 | -1.69E-46 |
| MS.gene050904 | MS.gene066030 | 0.883966 | 2.87E-71 | -1.69E-46 |
| MS.gene050950 | MS.gene066030 | 0.846053 | 2.77E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene066030 | 0.864719 | 9.93E-65 | -1.69E-46 |
| MS.gene051268 | MS.gene066030 | 0.85328 | 2.65E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene066030 | 0.905649 | 3.43E-80 | -1.69E-46 |
| MS.gene051439 | MS.gene066030 | -0.804681 | 1.92E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene066030 | 0.85774 | 1.33E-62 | -1.69E-46 |
| MS.gene051651 | MS.gene066030 | -0.851955 | 6.33E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene066030 | 0.802842 | 4.63E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene066030 | 0.888718 | 4.60E-73 | -1.69E-46 |
| MS.gene051941 | MS.gene066030 | 0.828071 | 1.10E-54 | -1.69E-46 |
| MS.gene052066 | MS.gene066030 | 0.828674 | 7.89E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene066030 | 0.858 | 1.11E-62 | -1.69E-46 |
| MS.gene052482 | MS.gene066030 | 0.892572 | 1.40E-74 | -1.69E-46 |
| MS.gene052486 | MS.gene066030 | 0.886614 | 2.93E-72 | -1.69E-46 |
| MS.gene052494 | MS.gene066030 | -0.819577 | 1.08E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene066030 | 0.815492 | 8.99E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene066030 | 0.887788 | 1.05E-72 | -1.69E-46 |
| MS.gene052504 | MS.gene066030 | 0.838181 | 3.35E-57 | -1.69E-46 |
| MS.gene052506 | MS.gene066030 | 0.875557 | 2.80E-68 | -1.69E-46 |
| MS.gene052615 | MS.gene066030 | 0.82752 | 1.49E-54 | -1.69E-46 |
| MS.gene052820 | MS.gene066030 | 0.815294 | 9.95E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene066030 | 0.878932 | 1.88E-69 | -1.69E-46 |
| MS.gene052823 | MS.gene066030 | 0.888197 | 7.31E-73 | -1.69E-46 |
| MS.gene052825 | MS.gene066030 | 0.887796 | 1.04E-72 | -1.69E-46 |
| MS.gene052870 | MS.gene066030 | 0.822933 | 1.82E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene066030 | 0.839341 | 1.68E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene066030 | 0.851905 | 6.54E-61 | -1.69E-46 |
| MS.gene052986 | MS.gene066030 | 0.839076 | 1.97E-57 | -1.69E-46 |
| MS.gene052987 | MS.gene066030 | 0.84349 | 1.36E-58 | -1.69E-46 |
| MS.gene053117 | MS.gene066030 | 0.843377 | 1.45E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene066030 | 0.878923 | 1.89E-69 | -1.69E-46 |
| MS.gene053213 | MS.gene066030 | 0.837858 | 4.06E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene066030 | 0.840537 | 8.19E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene066030 | -0.805462 | 1.32E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene066030 | -0.81819 | 2.23E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene066030 | 0.839495 | 1.53E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene066030 | 0.875787 | 2.34E-68 | -1.69E-46 |
| MS.gene053480 | MS.gene066030 | 0.898081 | 7.52E-77 | -1.69E-46 |
| MS.gene053574 | MS.gene066030 | 0.859482 | 4.01E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene066030 | 0.839674 | 1.38E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene066030 | 0.824961 | 6.08E-54 | -1.69E-46 |
| MS.gene053633 | MS.gene066030 | 0.853947 | 1.71E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene066030 | 0.892183 | 2.01E-74 | -1.69E-46 |
| MS.gene053916 | MS.gene066030 | 0.832895 | 7.28E-56 | -1.69E-46 |
| MS.gene054003 | MS.gene066030 | 0.815736 | 7.93E-52 | -1.69E-46 |
| MS.gene054270 | MS.gene066030 | -0.813816 | 2.11E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene066030 | 0.805289 | 1.43E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene066030 | 0.853258 | 2.69E-61 | -1.69E-46 |
| MS.gene054408 | MS.gene066030 | 0.832561 | 8.81E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene066030 | 0.863817 | 1.90E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene066030 | 0.836301 | 1.01E-56 | -1.69E-46 |
| MS.gene054614 | MS.gene066030 | -0.801185 | 1.01E-48 | -1.69E-46 |
| MS.gene054642 | MS.gene066030 | 0.838345 | 3.04E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene066030 | -0.849031 | 4.20E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene066030 | 0.907267 | 6.09E-81 | -1.69E-46 |
| MS.gene054851 | MS.gene066030 | -0.833322 | 5.70E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene066030 | -0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene066030 | 0.823206 | 1.57E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene066030 | 0.895062 | 1.37E-75 | -1.69E-46 |
| MS.gene055206 | MS.gene066030 | 0.831586 | 1.54E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene066030 | 0.847902 | 8.62E-60 | -1.69E-46 |
| MS.gene055251 | MS.gene066030 | -0.839752 | 1.31E-57 | -1.69E-46 |
| MS.gene055289 | MS.gene066030 | 0.80052 | 1.39E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene066030 | 0.867241 | 1.58E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene066030 | 0.890758 | 7.38E-74 | -1.69E-46 |
| MS.gene055577 | MS.gene066030 | 0.869199 | 3.70E-66 | -1.69E-46 |
| MS.gene055748 | MS.gene066030 | 0.891028 | 5.77E-74 | -1.69E-46 |
| MS.gene055750 | MS.gene066030 | 0.88599 | 5.05E-72 | -1.69E-46 |
| MS.gene055751 | MS.gene066030 | 0.895359 | 1.03E-75 | -1.69E-46 |
| MS.gene055776 | MS.gene066030 | 0.868607 | 5.76E-66 | -1.69E-46 |
| MS.gene055849 | MS.gene066030 | 0.81452 | 1.48E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene066030 | 0.93114 | 5.86E-94 | -1.69E-46 |
| MS.gene055941 | MS.gene066030 | 0.839133 | 1.90E-57 | -1.69E-46 |
| MS.gene056040 | MS.gene066030 | 0.814772 | 1.30E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene066030 | 0.863893 | 1.80E-64 | -1.69E-46 |
| MS.gene056166 | MS.gene066030 | 0.825058 | 5.77E-54 | -1.69E-46 |
| MS.gene056266 | MS.gene066030 | 0.835218 | 1.91E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene066030 | 0.894156 | 3.21E-75 | -1.69E-46 |
| MS.gene056446 | MS.gene066030 | 0.84227 | 2.87E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene066030 | 0.809727 | 1.64E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene066030 | 0.931162 | 5.68E-94 | -1.69E-46 |
| MS.gene056510 | MS.gene066030 | 0.887439 | 1.43E-72 | -1.69E-46 |
| MS.gene056583 | MS.gene066030 | -0.819634 | 1.05E-52 | -1.69E-46 |
| MS.gene056618 | MS.gene066030 | -0.87868 | 2.31E-69 | -1.69E-46 |
| MS.gene056657 | MS.gene066030 | 0.870007 | 2.02E-66 | -1.69E-46 |
| MS.gene056692 | MS.gene066030 | 0.856383 | 3.34E-62 | -1.69E-46 |
| MS.gene056694 | MS.gene066030 | -0.820773 | 5.75E-53 | -1.69E-46 |
| MS.gene056697 | MS.gene066030 | -0.80697 | 6.35E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene066030 | 0.811809 | 5.82E-51 | -1.69E-46 |
| MS.gene056898 | MS.gene066030 | 0.845989 | 2.88E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene066030 | 0.843846 | 1.09E-58 | -1.69E-46 |
| MS.gene057086 | MS.gene066030 | 0.831693 | 1.44E-55 | -1.69E-46 |
| MS.gene057332 | MS.gene066030 | 0.814687 | 1.36E-51 | -1.69E-46 |
| MS.gene057367 | MS.gene066030 | -0.816794 | 4.60E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene066030 | 0.818404 | 2.00E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene066030 | 0.848923 | 4.50E-60 | -1.69E-46 |
| MS.gene057734 | MS.gene066030 | 0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene066030 | 0.856093 | 4.06E-62 | -1.69E-46 |
| MS.gene057857 | MS.gene066030 | 0.8178 | 2.73E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene066030 | 0.865607 | 5.22E-65 | -1.69E-46 |
| MS.gene058130 | MS.gene066030 | 0.801779 | 7.66E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene066030 | 0.825546 | 4.42E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene066030 | -0.869538 | 2.87E-66 | -1.69E-46 |
| MS.gene058338 | MS.gene066030 | 0.859458 | 4.08E-63 | -1.69E-46 |
| MS.gene05837 | MS.gene066030 | 0.871465 | 6.70E-67 | -1.69E-46 |
| MS.gene058382 | MS.gene066030 | -0.857137 | 2.00E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene066030 | 0.886529 | 3.16E-72 | -1.69E-46 |
| MS.gene058544 | MS.gene066030 | 0.868057 | 8.66E-66 | -1.69E-46 |
| MS.gene058719 | MS.gene066030 | 0.804749 | 1.86E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene066030 | 0.805069 | 1.59E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene066030 | 0.843951 | 1.02E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene066030 | 0.886847 | 2.40E-72 | -1.69E-46 |
| MS.gene059022 | MS.gene066030 | 0.870084 | 1.91E-66 | -1.69E-46 |
| MS.gene059023 | MS.gene066030 | 0.900822 | 4.98E-78 | -1.69E-46 |
| MS.gene05913 | MS.gene066030 | 0.830561 | 2.74E-55 | -1.69E-46 |
| MS.gene05914 | MS.gene066030 | 0.836034 | 1.19E-56 | -1.69E-46 |
| MS.gene05926 | MS.gene066030 | -0.82861 | 8.17E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene066030 | 0.818106 | 2.33E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene066030 | 0.803351 | 3.63E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene066030 | 0.894976 | 1.48E-75 | -1.69E-46 |
| MS.gene059677 | MS.gene066030 | 0.88231 | 1.16E-70 | -1.69E-46 |
| MS.gene059699 | MS.gene066030 | -0.805595 | 1.24E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene066030 | -0.822151 | 2.76E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene066030 | 0.85136 | 9.34E-61 | -1.69E-46 |
| MS.gene059756 | MS.gene066030 | 0.855059 | 8.13E-62 | -1.69E-46 |
| MS.gene059801 | MS.gene066030 | 0.808079 | 3.69E-50 | -1.69E-46 |
| MS.gene059837 | MS.gene066030 | 0.869251 | 3.56E-66 | -1.69E-46 |
| MS.gene059865 | MS.gene066030 | 0.900416 | 7.49E-78 | -1.69E-46 |
| MS.gene05995 | MS.gene066030 | 0.828396 | 9.20E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene066030 | 0.833167 | 6.23E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene066030 | 0.902208 | 1.23E-78 | -1.69E-46 |
| MS.gene06027 | MS.gene066030 | 0.839762 | 1.31E-57 | -1.69E-46 |
| MS.gene06042 | MS.gene066030 | -0.803112 | 4.07E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene066030 | -0.835246 | 1.88E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene066030 | 0.849802 | 2.56E-60 | -1.69E-46 |
| MS.gene060762 | MS.gene066030 | 0.88283 | 7.49E-71 | -1.69E-46 |
| MS.gene060778 | MS.gene066030 | 0.885445 | 8.08E-72 | -1.69E-46 |
| MS.gene06077 | MS.gene066030 | 0.894742 | 1.85E-75 | -1.69E-46 |
| MS.gene060823 | MS.gene066030 | -0.832256 | 1.05E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene066030 | 0.818087 | 2.35E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene066030 | 0.837181 | 6.05E-57 | -1.69E-46 |
| MS.gene06097 | MS.gene066030 | 0.842676 | 2.24E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene066030 | 0.926667 | 3.42E-91 | -1.69E-46 |
| MS.gene061044 | MS.gene066030 | -0.858366 | 8.66E-63 | -1.69E-46 |
| MS.gene061150 | MS.gene066030 | 0.830903 | 2.26E-55 | -1.69E-46 |
| MS.gene061218 | MS.gene066030 | 0.804671 | 1.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066030.t1 | MTR_1g075660 | 97.101 | 276 | 8 | 0 | 1 | 276 | 1 | 276 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066030.t1 | AT3G23400 | 58.427 | 267 | 105 | 1 | 10 | 276 | 24 | 284 | 4.84e-104 | 304 |
| MS.gene066030.t1 | AT3G23400 | 77.119 | 118 | 27 | 0 | 89 | 206 | 97 | 214 | 1.42e-63 | 199 |
| MS.gene066030.t1 | AT3G23400 | 47.436 | 156 | 76 | 1 | 10 | 165 | 24 | 173 | 1.06e-34 | 124 |
| MS.gene066030.t1 | AT3G23400 | 47.436 | 156 | 76 | 1 | 10 | 165 | 24 | 173 | 1.06e-34 | 124 |
Find 88 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCTTGAAGTTCAATCTTC+TGG | 0.182887 | 1.2:+58323334 | MS.gene066030:CDS |
| CAGCAGCAGCTTTCACAATA+AGG | 0.227641 | 1.2:-58323250 | None:intergenic |
| CAGACCTGTCCAAGAGTTAT+AGG | 0.304929 | 1.2:-58324468 | None:intergenic |
| ATGCTGCAGAGTGCTGTTGC+TGG | 0.321754 | 1.2:+58324240 | MS.gene066030:intron |
| CTTGTTCTTGTTTCTTTCCC+AGG | 0.337264 | 1.2:+58323174 | MS.gene066030:CDS |
| TCAAAAGGATTAGAAGGAAT+TGG | 0.350636 | 1.2:-58323302 | None:intergenic |
| GGCTTAATATGTTTACCCTT+TGG | 0.357584 | 1.2:-58323221 | None:intergenic |
| GTAGAATCAAAAGGATTAGA+AGG | 0.359007 | 1.2:-58323308 | None:intergenic |
| AAGAAGTAGAAAATGGTAGT+AGG | 0.359127 | 1.2:-58323154 | None:intergenic |
| CAAGAACAAGAAGTAGAAAA+TGG | 0.362005 | 1.2:-58323161 | None:intergenic |
| AGCAGCAGCTTTCACAATAA+GGG | 0.381281 | 1.2:-58323249 | None:intergenic |
| GAGAAGTTGAGGGGTGAAGA+AGG | 0.382924 | 1.2:-58323121 | None:intergenic |
| ATCTTCCTTGCAACTTATCA+AGG | 0.390696 | 1.2:-58324365 | None:intergenic |
| CTAATGTGGCAGTTACTTCA+AGG | 0.421507 | 1.2:-58324781 | None:intergenic |
| AGAAGTAGAAAATGGTAGTA+GGG | 0.421680 | 1.2:-58323153 | None:intergenic |
| AGCCTTCCTGTGGGAGGTCC+AGG | 0.424885 | 1.2:-58324441 | None:intergenic |
| AACATTGATGTTGTTGCTCC+TGG | 0.427750 | 1.2:-58323192 | None:intergenic |
| CTCAATGCATCTGGAATTTG+AGG | 0.437203 | 1.2:-58325051 | None:intergenic |
| AAAACCACAGTGAAGACAAC+CGG | 0.437328 | 1.2:+58324997 | MS.gene066030:CDS |
| ACTCTAGGTGGGAGCCGTCC+TGG | 0.438721 | 1.2:+58324423 | MS.gene066030:CDS |
| AGGGGTGAAGAAGGAGATTG+AGG | 0.439438 | 1.2:-58323112 | None:intergenic |
| CTCTATCTCCTCTGGTGACG+CGG | 0.440764 | 1.2:-58325131 | None:intergenic |
| TGCTGCAGAGTGCTGTTGCT+GGG | 0.444702 | 1.2:+58324241 | MS.gene066030:intron |
| GATTGTGGCCTCAATGCATC+TGG | 0.448068 | 1.2:-58325060 | None:intergenic |
| AGGCTCCTTCCTATAACTCT+TGG | 0.456747 | 1.2:+58324459 | MS.gene066030:CDS |
| ACCTTCAGTTGGGTGCTCCA+TGG | 0.457796 | 1.2:+58324747 | MS.gene066030:CDS |
| CTCAAATTTGTGAGCTAATG+TGG | 0.469198 | 1.2:-58324795 | None:intergenic |
| GGGTGAGAGAGAGAAGTTGA+GGG | 0.469372 | 1.2:-58323131 | None:intergenic |
| ATCAATGTTCTTACTCCAAA+GGG | 0.471955 | 1.2:+58323206 | MS.gene066030:CDS |
| AAAGGCAGATGCTGCGGCTA+AGG | 0.475842 | 1.2:+58324302 | MS.gene066030:CDS |
| TAGCTCACCTCTATCTCCTC+TGG | 0.476879 | 1.2:-58325139 | None:intergenic |
| GGGGTGAAGAAGGAGATTGA+GGG | 0.481429 | 1.2:-58323111 | None:intergenic |
| GAAGCTGATATTTCAATCTC+TGG | 0.485146 | 1.2:+58323272 | MS.gene066030:CDS |
| GAGGAGATAGAGGTGAGCTA+AGG | 0.492802 | 1.2:+58325142 | MS.gene066030:CDS |
| TTGATAAGTTGCAAGGAAGA+TGG | 0.492943 | 1.2:+58324367 | MS.gene066030:CDS |
| CTCAAATTCCAGATGCATTG+AGG | 0.496761 | 1.2:+58325052 | MS.gene066030:CDS |
| GTTACTTCAAGGGGCGGTAG+AGG | 0.502869 | 1.2:-58324770 | None:intergenic |
| GCTAAGGAACTTGAAGAAGC+TGG | 0.503259 | 1.2:+58324318 | MS.gene066030:CDS |
| GCTTTCACAATAAGGGATGA+AGG | 0.507075 | 1.2:-58323242 | None:intergenic |
| GCGTTCTCCTCTCGTACTCT+AGG | 0.509013 | 1.2:+58324408 | MS.gene066030:CDS |
| TAATATAGTGGACCTTCAGT+TGG | 0.514528 | 1.2:+58324736 | MS.gene066030:CDS |
| TCAAGGGGCGGTAGAGGCCA+TGG | 0.516112 | 1.2:-58324764 | None:intergenic |
| GACCAGAAGATTGAACTTCA+AGG | 0.517749 | 1.2:-58323336 | None:intergenic |
| AGGAGATAGAGGTGAGCTAA+GGG | 0.519071 | 1.2:+58325143 | MS.gene066030:CDS |
| CCACAATCTAATAGAGGAAG+TGG | 0.521959 | 1.2:+58325075 | MS.gene066030:CDS |
| CCTTCCTATAACTCTTGGAC+AGG | 0.529460 | 1.2:+58324464 | MS.gene066030:CDS |
| AATATAGTGGACCTTCAGTT+GGG | 0.531782 | 1.2:+58324737 | MS.gene066030:CDS |
| GGGGTGAGAGAGAGAAGTTG+AGG | 0.537948 | 1.2:-58323132 | None:intergenic |
| CATCAATGTTCTTACTCCAA+AGG | 0.543730 | 1.2:+58323205 | MS.gene066030:CDS |
| ACCAGAAGATTGAACTTCAA+GGG | 0.545837 | 1.2:-58323335 | None:intergenic |
| TTCTCCTCTCGTACTCTAGG+TGG | 0.547834 | 1.2:+58324411 | MS.gene066030:CDS |
| TTGAGGCCACAATCTAATAG+AGG | 0.552114 | 1.2:+58325069 | MS.gene066030:CDS |
| GAAGTAGAAAATGGTAGTAG+GGG | 0.556342 | 1.2:-58323152 | None:intergenic |
| CCACTTCCTCTATTAGATTG+TGG | 0.557605 | 1.2:-58325075 | None:intergenic |
| AGCCGTCCTGGACCTCCCAC+AGG | 0.562196 | 1.2:+58324435 | MS.gene066030:CDS |
| TCTCCTCTCGTACTCTAGGT+GGG | 0.571585 | 1.2:+58324412 | MS.gene066030:CDS |
| CGGCAACTGTGAAAATGTCC+CGG | 0.576615 | 1.2:-58325016 | None:intergenic |
| GCCATGGAGCACCCAACTGA+AGG | 0.577155 | 1.2:-58324748 | None:intergenic |
| TCTATCTCCTCTGGTGACGC+GGG | 0.580159 | 1.2:-58325130 | None:intergenic |
| GACAACCTTGATAAGTTGCA+AGG | 0.586490 | 1.2:+58324360 | MS.gene066030:CDS |
| AAATGAAGAAGACCTACAAA+AGG | 0.586772 | 1.2:+58324284 | MS.gene066030:CDS |
| CGCGTCACCAGAGGAGATAG+AGG | 0.588847 | 1.2:+58325132 | MS.gene066030:CDS |
| TAATGTGGCAGTTACTTCAA+GGG | 0.589545 | 1.2:-58324780 | None:intergenic |
| AAACCACAGTGAAGACAACC+GGG | 0.596707 | 1.2:+58324998 | MS.gene066030:CDS |
| GCTCACAAATTTGAGCTCGT+AGG | 0.603423 | 1.2:+58324803 | MS.gene066030:CDS |
| GCTGTTGCTGGGCTAAATAG+AGG | 0.605133 | 1.2:+58324252 | MS.gene066030:CDS |
| CCTGTCCAAGAGTTATAGGA+AGG | 0.608009 | 1.2:-58324464 | None:intergenic |
| ACATTGATGTTGTTGCTCCT+GGG | 0.612390 | 1.2:-58323191 | None:intergenic |
| TATAGGAAGGAGCCTTCCTG+TGG | 0.615801 | 1.2:-58324451 | None:intergenic |
| GTCCTGGACCTCCCACAGGA+AGG | 0.617086 | 1.2:+58324439 | MS.gene066030:CDS |
| CCAGAAGATTGAACTTCAAG+GGG | 0.618887 | 1.2:-58323334 | None:intergenic |
| CCTACAAAAGGCAGATGCTG+CGG | 0.625367 | 1.2:+58324296 | MS.gene066030:CDS |
| ACTTATCAAGGTTGTCTGTG+AGG | 0.627193 | 1.2:-58324353 | None:intergenic |
| TTCCTGTGGGAGGTCCAGGA+CGG | 0.631302 | 1.2:-58324437 | None:intergenic |
| AAGTAGAAAATGGTAGTAGG+GGG | 0.633244 | 1.2:-58323151 | None:intergenic |
| GGTGAGAGAGAGAAGTTGAG+GGG | 0.635373 | 1.2:-58323130 | None:intergenic |
| GCGGATACCCGCGTCACCAG+AGG | 0.641068 | 1.2:+58325123 | MS.gene066030:CDS |
| AATGTGGCAGTTACTTCAAG+GGG | 0.642001 | 1.2:-58324779 | None:intergenic |
| GGAATTTGAGGCAAATCTAG+AGG | 0.645956 | 1.2:-58325039 | None:intergenic |
| GGAAGGAGCCTTCCTGTGGG+AGG | 0.648424 | 1.2:-58324447 | None:intergenic |
| GCTCCCACCTAGAGTACGAG+AGG | 0.667203 | 1.2:-58324415 | None:intergenic |
| GTGGCAGTTACTTCAAGGGG+CGG | 0.672835 | 1.2:-58324776 | None:intergenic |
| ATAGGAAGGAGCCTTCCTGT+GGG | 0.683855 | 1.2:-58324450 | None:intergenic |
| ATTTGAGGCAAATCTAGAGG+CGG | 0.686437 | 1.2:-58325036 | None:intergenic |
| AAGGAACTTGAAGAAGCTGG+AGG | 0.698611 | 1.2:+58324321 | MS.gene066030:CDS |
| TGAAGTTACATATCTTGACG+CGG | 0.700354 | 1.2:+58325104 | MS.gene066030:CDS |
| TGTCCCGGTTGTCTTCACTG+TGG | 0.714687 | 1.2:-58325001 | None:intergenic |
| CAGAAGATTGAACTTCAAGG+GGG | 0.762152 | 1.2:-58323333 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATAGATATAGTAT+AGG | + | chr1.2:58323551-58323570 | MS.gene066030:intron | 10.0% |
| !! | ATAATTGCATAATAAAAATA+GGG | + | chr1.2:58323495-58323514 | MS.gene066030:intron | 10.0% |
| !! | TATAAGTATTTATCATATAA+GGG | + | chr1.2:58323929-58323948 | MS.gene066030:intron | 10.0% |
| !! | TATAATTGCATAATAAAAAT+AGG | + | chr1.2:58323494-58323513 | MS.gene066030:intron | 10.0% |
| !! | AAATATTACATCATTATATC+AGG | - | chr1.2:58324504-58324523 | None:intergenic | 15.0% |
| !! | ATAAGTATTTATCATATAAG+GGG | + | chr1.2:58323930-58323949 | MS.gene066030:intron | 15.0% |
| !! | ATTGTCATTAAAATGTATTT+AGG | + | chr1.2:58323639-58323658 | MS.gene066030:intron | 15.0% |
| !! | GTATAAGTATTTATCATATA+AGG | + | chr1.2:58323928-58323947 | MS.gene066030:intron | 15.0% |
| !! | TAATTGCATAATAAAAATAG+GGG | + | chr1.2:58323496-58323515 | MS.gene066030:intron | 15.0% |
| !!! | TATATATTTTTGTTTTGCAA+AGG | - | chr1.2:58323541-58323560 | None:intergenic | 15.0% |
| !! | ATAAACATATTATTGAACAG+CGG | - | chr1.2:58324643-58324662 | None:intergenic | 20.0% |
| !! | GATTATGTATAAGTTGTAAA+CGG | + | chr1.2:58323954-58323973 | MS.gene066030:intron | 20.0% |
| !! | TAAGTATTTATCATATAAGG+GGG | + | chr1.2:58323931-58323950 | MS.gene066030:intron | 20.0% |
| !! | TGGATAAATAACTTGATTTA+GGG | + | chr1.2:58323669-58323688 | MS.gene066030:intron | 20.0% |
| !!! | AATAAGTTGAAAACAACTTA+TGG | + | chr1.2:58324025-58324044 | MS.gene066030:intron | 20.0% |
| !!! | ACTTAAGTATCTAAGTTTTA+TGG | + | chr1.2:58323598-58323617 | MS.gene066030:intron | 20.0% |
| !!! | ATTATGTTTTAGTCTCATTT+CGG | + | chr1.2:58324589-58324608 | MS.gene066030:intron | 20.0% |
| !!! | CAAAGATTTTGATAATATAG+TGG | + | chr1.2:58324724-58324743 | MS.gene066030:CDS | 20.0% |
| !!! | CTTTTGTTTGACAAATTAAA+TGG | + | chr1.2:58323415-58323434 | MS.gene066030:intron | 20.0% |
| !!! | TAGATTATACGAAAACATTT+TGG | + | chr1.2:58323806-58323825 | MS.gene066030:intron | 20.0% |
| ! | AAAATAGGGGAAATAGTTAT+AGG | + | chr1.2:58323509-58323528 | MS.gene066030:intron | 25.0% |
| ! | AAATCAAGTTATTTATCCAG+AGG | - | chr1.2:58323668-58323687 | None:intergenic | 25.0% |
| ! | AAGTATTTATCATATAAGGG+GGG | + | chr1.2:58323932-58323951 | MS.gene066030:intron | 25.0% |
| ! | AATCAAGTTATTTATCCAGA+GGG | - | chr1.2:58323667-58323686 | None:intergenic | 25.0% |
| ! | CTGGATAAATAACTTGATTT+AGG | + | chr1.2:58323668-58323687 | MS.gene066030:intron | 25.0% |
| !!! | ACTGTTTTGTTTTTGCTATT+AGG | + | chr1.2:58324676-58324695 | MS.gene066030:intron | 25.0% |
| AAATGAAGAAGACCTACAAA+AGG | + | chr1.2:58324284-58324303 | MS.gene066030:CDS | 30.0% | |
| AAGAAGTAGAAAATGGTAGT+AGG | - | chr1.2:58323157-58323176 | None:intergenic | 30.0% | |
| AATCCTTATGTAGTTGTGTA+AGG | - | chr1.2:58324126-58324145 | None:intergenic | 30.0% | |
| AGAAGTAGAAAATGGTAGTA+GGG | - | chr1.2:58323156-58323175 | None:intergenic | 30.0% | |
| ATCAAGTTATTTATCCAGAG+GGG | - | chr1.2:58323666-58323685 | None:intergenic | 30.0% | |
| ATCAATGTTCTTACTCCAAA+GGG | + | chr1.2:58323206-58323225 | MS.gene066030:CDS | 30.0% | |
| ATCCTTATGTAGTTGTGTAA+GGG | - | chr1.2:58324125-58324144 | None:intergenic | 30.0% | |
| CAAGAACAAGAAGTAGAAAA+TGG | - | chr1.2:58323164-58323183 | None:intergenic | 30.0% | |
| GTAGAATCAAAAGGATTAGA+AGG | - | chr1.2:58323311-58323330 | None:intergenic | 30.0% | |
| TAACTTATGACAAGCTTTCA+AGG | + | chr1.2:58323762-58323781 | MS.gene066030:intron | 30.0% | |
| TCAAAAGGATTAGAAGGAAT+TGG | - | chr1.2:58323305-58323324 | None:intergenic | 30.0% | |
| TTACTGTATCAGAGAGTTTA+TGG | - | chr1.2:58324069-58324088 | None:intergenic | 30.0% | |
| TTGTTCATAACTATCTTTCC+TGG | + | chr1.2:58324531-58324550 | MS.gene066030:intron | 30.0% | |
| ! | AACTTGATTTAGGGTTTGTT+TGG | + | chr1.2:58323678-58323697 | MS.gene066030:intron | 30.0% |
| ! | AATCACTTGCTACACTATTT+GGG | + | chr1.2:58323738-58323757 | MS.gene066030:intron | 30.0% |
| ! | ACACAACTACATAAGGATTT+TGG | + | chr1.2:58324127-58324146 | MS.gene066030:intron | 30.0% |
| ! | ATATTATTGAACAGCGGTTT+TGG | - | chr1.2:58324637-58324656 | None:intergenic | 30.0% |
| ! | TAATCACTTGCTACACTATT+TGG | + | chr1.2:58323737-58323756 | MS.gene066030:intron | 30.0% |
| ! | TTTAGGGTTTGTTTGGAATT+TGG | + | chr1.2:58323685-58323704 | MS.gene066030:intron | 30.0% |
| !! | ACTACATAAGGATTTTGGAA+TGG | + | chr1.2:58324132-58324151 | MS.gene066030:intron | 30.0% |
| AACCCTTACACAACTACATA+AGG | + | chr1.2:58324120-58324139 | MS.gene066030:intron | 35.0% | |
| AACTAATCATGCACTCAACA+TGG | - | chr1.2:58323472-58323491 | None:intergenic | 35.0% | |
| AAGTAGAAAATGGTAGTAGG+GGG | - | chr1.2:58323154-58323173 | None:intergenic | 35.0% | |
| ACCAGAAGATTGAACTTCAA+GGG | - | chr1.2:58323338-58323357 | None:intergenic | 35.0% | |
| ACTAATCATGCACTCAACAT+GGG | - | chr1.2:58323471-58323490 | None:intergenic | 35.0% | |
| ACTGCTTTCATAAGCTATCT+CGG | + | chr1.2:58323990-58324009 | MS.gene066030:intron | 35.0% | |
| ACTTGTTTGAGCTTATCTAC+TGG | + | chr1.2:58323712-58323731 | MS.gene066030:intron | 35.0% | |
| ATAAGTTGTAAACGGTCTCA+CGG | + | chr1.2:58323962-58323981 | MS.gene066030:intron | 35.0% | |
| ATCTTCCTTGCAACTTATCA+AGG | - | chr1.2:58324368-58324387 | None:intergenic | 35.0% | |
| CAACTTATGGACATGTCATA+AGG | + | chr1.2:58324038-58324057 | MS.gene066030:intron | 35.0% | |
| CAAGGATAGCTTATGAAAAC+AGG | + | chr1.2:58323780-58323799 | MS.gene066030:intron | 35.0% | |
| CATCAATGTTCTTACTCCAA+AGG | + | chr1.2:58323205-58323224 | MS.gene066030:CDS | 35.0% | |
| CTCAAATTTGTGAGCTAATG+TGG | - | chr1.2:58324798-58324817 | None:intergenic | 35.0% | |
| GAAGCTGATATTTCAATCTC+TGG | + | chr1.2:58323272-58323291 | MS.gene066030:CDS | 35.0% | |
| GAAGTAGAAAATGGTAGTAG+GGG | - | chr1.2:58323155-58323174 | None:intergenic | 35.0% | |
| GGCTTAATATGTTTACCCTT+TGG | - | chr1.2:58323224-58323243 | None:intergenic | 35.0% | |
| TAATGTGGCAGTTACTTCAA+GGG | - | chr1.2:58324783-58324802 | None:intergenic | 35.0% | |
| TCAAGTTATTTATCCAGAGG+GGG | - | chr1.2:58323665-58323684 | None:intergenic | 35.0% | |
| TGAAGTTACATATCTTGACG+CGG | + | chr1.2:58325104-58325123 | MS.gene066030:CDS | 35.0% | |
| TGCTTTCTACTGCATATACA+TGG | + | chr1.2:58324835-58324854 | MS.gene066030:intron | 35.0% | |
| TTGATAAGTTGCAAGGAAGA+TGG | + | chr1.2:58324367-58324386 | MS.gene066030:CDS | 35.0% | |
| ! | TCTCATTAGCTTAGCTTCTT+TGG | + | chr1.2:58323375-58323394 | MS.gene066030:intron | 35.0% |
| !! | AATATAGTGGACCTTCAGTT+GGG | + | chr1.2:58324737-58324756 | MS.gene066030:CDS | 35.0% |
| !! | TAATATAGTGGACCTTCAGT+TGG | + | chr1.2:58324736-58324755 | MS.gene066030:CDS | 35.0% |
| !!! | ACATAAGGATTTTGGAATGG+TGG | + | chr1.2:58324135-58324154 | MS.gene066030:intron | 35.0% |
| AAAACCACAGTGAAGACAAC+CGG | + | chr1.2:58324997-58325016 | MS.gene066030:CDS | 40.0% | |
| AACATTGATGTTGTTGCTCC+TGG | - | chr1.2:58323195-58323214 | None:intergenic | 40.0% | |
| AAGGGGGAAGTAGAATCAAA+AGG | - | chr1.2:58323320-58323339 | None:intergenic | 40.0% | |
| AATGTGGCAGTTACTTCAAG+GGG | - | chr1.2:58324782-58324801 | None:intergenic | 40.0% | |
| ACAAACCACTCACAGTAAAG+AGG | - | chr1.2:58324938-58324957 | None:intergenic | 40.0% | |
| ACATTGATGTTGTTGCTCCT+GGG | - | chr1.2:58323194-58323213 | None:intergenic | 40.0% | |
| ACTTATCAAGGTTGTCTGTG+AGG | - | chr1.2:58324356-58324375 | None:intergenic | 40.0% | |
| AGCAGCAGCTTTCACAATAA+GGG | - | chr1.2:58323252-58323271 | None:intergenic | 40.0% | |
| ATAAGCCCGTTTATCTGAAC+AGG | + | chr1.2:58323892-58323911 | MS.gene066030:intron | 40.0% | |
| CAGAAGATTGAACTTCAAGG+GGG | - | chr1.2:58323336-58323355 | None:intergenic | 40.0% | |
| CCACAATCTAATAGAGGAAG+TGG | + | chr1.2:58325075-58325094 | MS.gene066030:CDS | 40.0% | |
| CCACTTCCTCTATTAGATTG+TGG | - | chr1.2:58325078-58325097 | None:intergenic | 40.0% | |
| CCAGAAGATTGAACTTCAAG+GGG | - | chr1.2:58323337-58323356 | None:intergenic | 40.0% | |
| CTAATGTGGCAGTTACTTCA+AGG | - | chr1.2:58324784-58324803 | None:intergenic | 40.0% | |
| CTCAAATTCCAGATGCATTG+AGG | + | chr1.2:58325052-58325071 | MS.gene066030:CDS | 40.0% | |
| GACAACCTTGATAAGTTGCA+AGG | + | chr1.2:58324360-58324379 | MS.gene066030:CDS | 40.0% | |
| GACCAGAAGATTGAACTTCA+AGG | - | chr1.2:58323339-58323358 | None:intergenic | 40.0% | |
| GCTTTCACAATAAGGGATGA+AGG | - | chr1.2:58323245-58323264 | None:intergenic | 40.0% | |
| TAAGCCCGTTTATCTGAACA+GGG | + | chr1.2:58323893-58323912 | MS.gene066030:intron | 40.0% | |
| TTGAGGCCACAATCTAATAG+AGG | + | chr1.2:58325069-58325088 | MS.gene066030:CDS | 40.0% | |
| ! | ATTTGAGGCAAATCTAGAGG+CGG | - | chr1.2:58325039-58325058 | None:intergenic | 40.0% |
| ! | CTCAATGCATCTGGAATTTG+AGG | - | chr1.2:58325054-58325073 | None:intergenic | 40.0% |
| ! | CTTGTTCTTGTTTCTTTCCC+AGG | + | chr1.2:58323174-58323193 | MS.gene066030:CDS | 40.0% |
| ! | GGAATTTGAGGCAAATCTAG+AGG | - | chr1.2:58325042-58325061 | None:intergenic | 40.0% |
| ! | TAGTTGTGTAAGGGTTTGCT+TGG | - | chr1.2:58324116-58324135 | None:intergenic | 40.0% |
| ! | TGAGTGGTTTGTGATGATTC+AGG | + | chr1.2:58324946-58324965 | MS.gene066030:intron | 40.0% |
| AAACCACAGTGAAGACAACC+GGG | + | chr1.2:58324998-58325017 | MS.gene066030:CDS | 45.0% | |
| AAATGTATTTAGGCCCCCTC+TGG | + | chr1.2:58323649-58323668 | MS.gene066030:intron | 45.0% | |
| AACCACTCACAGTAAAGAGG+CGG | - | chr1.2:58324935-58324954 | None:intergenic | 45.0% | |
| AAGGAACTTGAAGAAGCTGG+AGG | + | chr1.2:58324321-58324340 | MS.gene066030:CDS | 45.0% | |
| AGGAGATAGAGGTGAGCTAA+GGG | + | chr1.2:58325143-58325162 | MS.gene066030:CDS | 45.0% | |
| AGGCTCCTTCCTATAACTCT+TGG | + | chr1.2:58324459-58324478 | MS.gene066030:CDS | 45.0% | |
| CAGACCTGTCCAAGAGTTAT+AGG | - | chr1.2:58324471-58324490 | None:intergenic | 45.0% | |
| CAGCAGCAGCTTTCACAATA+AGG | - | chr1.2:58323253-58323272 | None:intergenic | 45.0% | |
| CCCCTTGAAGTTCAATCTTC+TGG | + | chr1.2:58323334-58323353 | MS.gene066030:CDS | 45.0% | |
| CCTGTCCAAGAGTTATAGGA+AGG | - | chr1.2:58324467-58324486 | None:intergenic | 45.0% | |
| CCTTCCTATAACTCTTGGAC+AGG | + | chr1.2:58324464-58324483 | MS.gene066030:CDS | 45.0% | |
| CTTGCCCTGTTCAGATAAAC+GGG | - | chr1.2:58323900-58323919 | None:intergenic | 45.0% | |
| GCTAAGGAACTTGAAGAAGC+TGG | + | chr1.2:58324318-58324337 | MS.gene066030:CDS | 45.0% | |
| GCTCACAAATTTGAGCTCGT+AGG | + | chr1.2:58324803-58324822 | MS.gene066030:CDS | 45.0% | |
| GCTTGCCCTGTTCAGATAAA+CGG | - | chr1.2:58323901-58323920 | None:intergenic | 45.0% | |
| GGAGATCAAAGCACACACAT+AGG | - | chr1.2:58324616-58324635 | None:intergenic | 45.0% | |
| AGGGGTGAAGAAGGAGATTG+AGG | - | chr1.2:58323115-58323134 | None:intergenic | 50.0% | |
| ATAGGAAGGAGCCTTCCTGT+GGG | - | chr1.2:58324453-58324472 | None:intergenic | 50.0% | |
| CCTACAAAAGGCAGATGCTG+CGG | + | chr1.2:58324296-58324315 | MS.gene066030:CDS | 50.0% | |
| CGGCAACTGTGAAAATGTCC+CGG | - | chr1.2:58325019-58325038 | None:intergenic | 50.0% | |
| GAGAAGTTGAGGGGTGAAGA+AGG | - | chr1.2:58323124-58323143 | None:intergenic | 50.0% | |
| GAGGAGATAGAGGTGAGCTA+AGG | + | chr1.2:58325142-58325161 | MS.gene066030:CDS | 50.0% | |
| GATTGTGGCCTCAATGCATC+TGG | - | chr1.2:58325063-58325082 | None:intergenic | 50.0% | |
| GCTGTTGCTGGGCTAAATAG+AGG | + | chr1.2:58324252-58324271 | MS.gene066030:CDS | 50.0% | |
| GGGGTGAAGAAGGAGATTGA+GGG | - | chr1.2:58323114-58323133 | None:intergenic | 50.0% | |
| GGGTGAGAGAGAGAAGTTGA+GGG | - | chr1.2:58323134-58323153 | None:intergenic | 50.0% | |
| GGTGAGAGAGAGAAGTTGAG+GGG | - | chr1.2:58323133-58323152 | None:intergenic | 50.0% | |
| GTTGCTCAGTTGCAACTTCC+AGG | - | chr1.2:58324552-58324571 | None:intergenic | 50.0% | |
| TAGCTCACCTCTATCTCCTC+TGG | - | chr1.2:58325142-58325161 | None:intergenic | 50.0% | |
| TATAGGAAGGAGCCTTCCTG+TGG | - | chr1.2:58324454-58324473 | None:intergenic | 50.0% | |
| TCTCCTCTCGTACTCTAGGT+GGG | + | chr1.2:58324412-58324431 | MS.gene066030:CDS | 50.0% | |
| TTCTCCTCTCGTACTCTAGG+TGG | + | chr1.2:58324411-58324430 | MS.gene066030:CDS | 50.0% | |
| AAAGGCAGATGCTGCGGCTA+AGG | + | chr1.2:58324302-58324321 | MS.gene066030:CDS | 55.0% | |
| ACCTTCAGTTGGGTGCTCCA+TGG | + | chr1.2:58324747-58324766 | MS.gene066030:CDS | 55.0% | |
| GACCGCCTCTTTACTGTGAG+TGG | + | chr1.2:58324930-58324949 | MS.gene066030:intron | 55.0% | |
| GCGTTCTCCTCTCGTACTCT+AGG | + | chr1.2:58324408-58324427 | MS.gene066030:CDS | 55.0% | |
| GGGGTGAGAGAGAGAAGTTG+AGG | - | chr1.2:58323135-58323154 | None:intergenic | 55.0% | |
| GTGGCAGTTACTTCAAGGGG+CGG | - | chr1.2:58324779-58324798 | None:intergenic | 55.0% | |
| GTTACTTCAAGGGGCGGTAG+AGG | - | chr1.2:58324773-58324792 | None:intergenic | 55.0% | |
| TGTCCCGGTTGTCTTCACTG+TGG | - | chr1.2:58325004-58325023 | None:intergenic | 55.0% | |
| ! | CCGCAGCATCTGCCTTTTGT+AGG | - | chr1.2:58324299-58324318 | None:intergenic | 55.0% |
| ! | CTCTATCTCCTCTGGTGACG+CGG | - | chr1.2:58325134-58325153 | None:intergenic | 55.0% |
| ! | TCTATCTCCTCTGGTGACGC+GGG | - | chr1.2:58325133-58325152 | None:intergenic | 55.0% |
| !! | ATGCTGCAGAGTGCTGTTGC+TGG | + | chr1.2:58324240-58324259 | MS.gene066030:intron | 55.0% |
| !! | TGCTGCAGAGTGCTGTTGCT+GGG | + | chr1.2:58324241-58324260 | MS.gene066030:intron | 55.0% |
| CGCGTCACCAGAGGAGATAG+AGG | + | chr1.2:58325132-58325151 | MS.gene066030:CDS | 60.0% | |
| GCTCCCACCTAGAGTACGAG+AGG | - | chr1.2:58324418-58324437 | None:intergenic | 60.0% | |
| TTCCTGTGGGAGGTCCAGGA+CGG | - | chr1.2:58324440-58324459 | None:intergenic | 60.0% | |
| ! | GCCATGGAGCACCCAACTGA+AGG | - | chr1.2:58324751-58324770 | None:intergenic | 60.0% |
| ACTCTAGGTGGGAGCCGTCC+TGG | + | chr1.2:58324423-58324442 | MS.gene066030:CDS | 65.0% | |
| AGCCTTCCTGTGGGAGGTCC+AGG | - | chr1.2:58324444-58324463 | None:intergenic | 65.0% | |
| GGAAGGAGCCTTCCTGTGGG+AGG | - | chr1.2:58324450-58324469 | None:intergenic | 65.0% | |
| GTCCTGGACCTCCCACAGGA+AGG | + | chr1.2:58324439-58324458 | MS.gene066030:CDS | 65.0% | |
| TCAAGGGGCGGTAGAGGCCA+TGG | - | chr1.2:58324767-58324786 | None:intergenic | 65.0% | |
| AGCCGTCCTGGACCTCCCAC+AGG | + | chr1.2:58324435-58324454 | MS.gene066030:CDS | 70.0% | |
| GCGGATACCCGCGTCACCAG+AGG | + | chr1.2:58325123-58325142 | MS.gene066030:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 58323104 | 58325182 | 58323104 | ID=MS.gene066030 |
| chr1.2 | mRNA | 58323104 | 58325182 | 58323104 | ID=MS.gene066030.t1;Parent=MS.gene066030 |
| chr1.2 | exon | 58323104 | 58323355 | 58323104 | ID=MS.gene066030.t1.exon1;Parent=MS.gene066030.t1 |
| chr1.2 | CDS | 58323104 | 58323355 | 58323104 | ID=cds.MS.gene066030.t1;Parent=MS.gene066030.t1 |
| chr1.2 | exon | 58324249 | 58324485 | 58324249 | ID=MS.gene066030.t1.exon2;Parent=MS.gene066030.t1 |
| chr1.2 | CDS | 58324249 | 58324485 | 58324249 | ID=cds.MS.gene066030.t1;Parent=MS.gene066030.t1 |
| chr1.2 | exon | 58324698 | 58324824 | 58324698 | ID=MS.gene066030.t1.exon3;Parent=MS.gene066030.t1 |
| chr1.2 | CDS | 58324698 | 58324824 | 58324698 | ID=cds.MS.gene066030.t1;Parent=MS.gene066030.t1 |
| chr1.2 | exon | 58324968 | 58325182 | 58324968 | ID=MS.gene066030.t1.exon4;Parent=MS.gene066030.t1 |
| chr1.2 | CDS | 58324968 | 58325182 | 58324968 | ID=cds.MS.gene066030.t1;Parent=MS.gene066030.t1 |
| Gene Sequence |
| Protein sequence |
