Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57344.t1 | XP_013446743.1 | 96.1 | 594 | 23 | 0 | 1 | 594 | 8 | 601 | 7.4e-310 | 1072.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57344.t1 | F4HVG8 | 60.2 | 538 | 188 | 8 | 55 | 586 | 82 | 599 | 2.0e-173 | 610.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57344.t1 | A0A072U4L7 | 96.1 | 594 | 23 | 0 | 1 | 594 | 8 | 601 | 5.3e-310 | 1072.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene57344 | 0.833016 | 6.79E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene57344 | 0.865656 | 5.04E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene57344 | 0.826063 | 3.33E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene57344 | 0.827336 | 1.66E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene57344 | 0.826943 | 2.05E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene57344 | 0.824172 | 9.32E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene57344 | 0.815134 | 1.08E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene57344 | 0.832344 | 9.98E-56 | -1.69E-46 |
| MS.gene049865 | MS.gene57344 | 0.816631 | 5.01E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene57344 | 0.815823 | 7.59E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene57344 | 0.818114 | 2.32E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene57344 | 0.810322 | 1.22E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene57344 | 0.868016 | 8.93E-66 | -1.69E-46 |
| MS.gene050323 | MS.gene57344 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene57344 | 0.816484 | 5.40E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene57344 | 0.845766 | 3.31E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene57344 | 0.865307 | 6.49E-65 | -1.69E-46 |
| MS.gene050538 | MS.gene57344 | 0.808918 | 2.45E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene57344 | 0.883161 | 5.67E-71 | -1.69E-46 |
| MS.gene050612 | MS.gene57344 | 0.834569 | 2.78E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene57344 | 0.834091 | 3.66E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene57344 | 0.847256 | 1.30E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene57344 | 0.866828 | 2.14E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene57344 | 0.811693 | 6.16E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene57344 | 0.828245 | 1.00E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene57344 | 0.830162 | 3.43E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene57344 | 0.83057 | 2.73E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene57344 | 0.876456 | 1.38E-68 | -1.69E-46 |
| MS.gene050950 | MS.gene57344 | 0.874349 | 7.24E-68 | -1.69E-46 |
| MS.gene050986 | MS.gene57344 | 0.845426 | 4.09E-59 | -1.69E-46 |
| MS.gene051268 | MS.gene57344 | 0.806118 | 9.61E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene57344 | 0.858448 | 8.18E-63 | -1.69E-46 |
| MS.gene051387 | MS.gene57344 | 0.804045 | 2.61E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene57344 | 0.803965 | 2.71E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene57344 | 0.812139 | 4.93E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene57344 | 0.834279 | 3.28E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene57344 | 0.86868 | 5.45E-66 | -1.69E-46 |
| MS.gene052486 | MS.gene57344 | 0.872968 | 2.12E-67 | -1.69E-46 |
| MS.gene052503 | MS.gene57344 | 0.829203 | 5.87E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene57344 | 0.804768 | 1.84E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene57344 | 0.833462 | 5.26E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene57344 | 0.831006 | 2.13E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene57344 | 0.836876 | 7.23E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene57344 | 0.873009 | 2.05E-67 | -1.69E-46 |
| MS.gene053207 | MS.gene57344 | 0.802722 | 4.90E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene57344 | 0.842479 | 2.52E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene57344 | 0.847188 | 1.35E-59 | -1.69E-46 |
| MS.gene053436 | MS.gene57344 | 0.841892 | 3.61E-58 | -1.69E-46 |
| MS.gene053479 | MS.gene57344 | 0.828014 | 1.14E-54 | -1.69E-46 |
| MS.gene053480 | MS.gene57344 | 0.81036 | 1.20E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene57344 | 0.86023 | 2.39E-63 | -1.69E-46 |
| MS.gene053579 | MS.gene57344 | 0.800526 | 1.38E-48 | -1.69E-46 |
| MS.gene053626 | MS.gene57344 | 0.844355 | 7.96E-59 | -1.69E-46 |
| MS.gene053824 | MS.gene57344 | 0.80209 | 6.62E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene57344 | 0.833946 | 3.98E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene57344 | 0.837766 | 4.28E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene57344 | 0.822027 | 2.95E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene57344 | 0.802307 | 5.97E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene57344 | 0.880761 | 4.21E-70 | -1.69E-46 |
| MS.gene054851 | MS.gene57344 | -0.807988 | 3.86E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene57344 | 0.824489 | 7.85E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene57344 | 0.833396 | 5.46E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene57344 | 0.830307 | 3.16E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene57344 | 0.841124 | 5.75E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene57344 | 0.844112 | 9.25E-59 | -1.69E-46 |
| MS.gene055629 | MS.gene57344 | 0.813727 | 2.21E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene57344 | 0.840446 | 8.65E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene57344 | 0.833646 | 4.73E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene57344 | 0.832419 | 9.55E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene57344 | 0.860337 | 2.22E-63 | -1.69E-46 |
| MS.gene056040 | MS.gene57344 | 0.890306 | 1.11E-73 | -1.69E-46 |
| MS.gene056166 | MS.gene57344 | 0.828895 | 6.97E-55 | -1.69E-46 |
| MS.gene056218 | MS.gene57344 | -0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene056450 | MS.gene57344 | 0.833838 | 4.24E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene57344 | 0.850681 | 1.45E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene57344 | 0.848694 | 5.21E-60 | -1.69E-46 |
| MS.gene056610 | MS.gene57344 | 0.818124 | 2.31E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene57344 | 0.821589 | 3.73E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene57344 | 0.840543 | 8.16E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene57344 | 0.811162 | 8.04E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene57344 | 0.833399 | 5.46E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene57344 | 0.881368 | 2.54E-70 | -1.69E-46 |
| MS.gene05787 | MS.gene57344 | 0.853086 | 3.02E-61 | -1.69E-46 |
| MS.gene058130 | MS.gene57344 | 0.812861 | 3.43E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene57344 | -0.801669 | 8.07E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene57344 | 0.865612 | 5.21E-65 | -1.69E-46 |
| MS.gene058419 | MS.gene57344 | 0.828164 | 1.05E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene57344 | 0.86662 | 2.50E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene57344 | 0.83099 | 2.15E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene57344 | 0.817886 | 2.61E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene57344 | 0.831169 | 1.94E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene57344 | 0.822041 | 2.93E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene57344 | 0.856939 | 2.29E-62 | -1.69E-46 |
| MS.gene05914 | MS.gene57344 | 0.81639 | 5.67E-52 | -1.69E-46 |
| MS.gene059181 | MS.gene57344 | 0.848247 | 6.92E-60 | -1.69E-46 |
| MS.gene059303 | MS.gene57344 | 0.801793 | 7.61E-49 | -1.69E-46 |
| MS.gene059526 | MS.gene57344 | -0.824941 | 6.14E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene57344 | 0.830905 | 2.26E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene57344 | 0.826679 | 2.38E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene57344 | 0.840101 | 1.06E-57 | -1.69E-46 |
| MS.gene059756 | MS.gene57344 | 0.837902 | 3.95E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene57344 | 0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene059837 | MS.gene57344 | 0.82356 | 1.30E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene57344 | 0.841862 | 3.67E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene57344 | 0.857247 | 1.86E-62 | -1.69E-46 |
| MS.gene060595 | MS.gene57344 | -0.811013 | 8.66E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene57344 | 0.843806 | 1.12E-58 | -1.69E-46 |
| MS.gene060778 | MS.gene57344 | 0.82122 | 4.53E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene57344 | 0.882075 | 1.41E-70 | -1.69E-46 |
| MS.gene06092 | MS.gene57344 | 0.842534 | 2.44E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene57344 | 0.865882 | 4.28E-65 | -1.69E-46 |
| MS.gene061150 | MS.gene57344 | 0.82152 | 3.87E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57344.t1 | MTR_8g089810 | 96.128 | 594 | 23 | 0 | 1 | 594 | 8 | 601 | 0.0 | 1183 |
| MS.gene57344.t1 | MTR_8g089810 | 96.479 | 426 | 15 | 0 | 1 | 426 | 8 | 433 | 0.0 | 849 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57344.t1 | AT1G67840 | 60.902 | 532 | 182 | 9 | 61 | 586 | 88 | 599 | 0.0 | 636 |
| MS.gene57344.t1 | AT1G67840 | 54.301 | 372 | 144 | 9 | 61 | 426 | 88 | 439 | 3.68e-123 | 371 |
Find 171 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTTTGTTGTTGGCTTCT+TGG | 0.133045 | 4.2:-11691165 | MS.gene57344:CDS |
| AGCTCCAAGTGGAGCATCTT+TGG | 0.305623 | 4.2:+11688015 | None:intergenic |
| GACTATTGCCCGGGAGATAC+TGG | 0.314615 | 4.2:-11688077 | MS.gene57344:CDS |
| GGGTTGAATAATCATGTATC+TGG | 0.315581 | 4.2:-11691089 | MS.gene57344:CDS |
| GGAGGAGAGGGTGAGGGTGG+TGG | 0.328913 | 4.2:+11692562 | None:intergenic |
| TCGTCATCGGAATCGGAGTT+AGG | 0.331639 | 4.2:+11692599 | None:intergenic |
| GGAGTTAGGGTTAGCGTTGA+TGG | 0.333860 | 4.2:+11692613 | None:intergenic |
| GTTACCATATAGTGCATATC+AGG | 0.354489 | 4.2:+11688818 | None:intergenic |
| CGTTCCCGAATCGTTCTTAT+CGG | 0.360871 | 4.2:-11692387 | MS.gene57344:intron |
| GTTAATAAAATGCATAAATC+TGG | 0.375057 | 4.2:-11689454 | MS.gene57344:CDS |
| GTTAAACATCCCTTTGTTGT+TGG | 0.376078 | 4.2:-11691173 | MS.gene57344:CDS |
| TCTGGCTATGGCATATGTTA+TGG | 0.382761 | 4.2:-11690922 | MS.gene57344:CDS |
| CTTGGTTGCTGAGCTTCCAT+TGG | 0.384197 | 4.2:-11691147 | MS.gene57344:CDS |
| AGAACTACAGCTTTACATTC+AGG | 0.395217 | 4.2:+11691203 | None:intergenic |
| TTCTCTTAGTGCTGCTGCCC+AGG | 0.398572 | 4.2:-11689422 | MS.gene57344:CDS |
| CAGTTCGGAAAGTGCGGTCT+CGG | 0.398971 | 4.2:+11692136 | None:intergenic |
| CGCGGGTGGAGGAGAGGGTG+AGG | 0.401310 | 4.2:+11692555 | None:intergenic |
| CTGAAAGCCTGGCGCAGAGC+AGG | 0.408438 | 4.2:+11688950 | None:intergenic |
| GAGGCAGAGTCGATGGAAAT+CGG | 0.411945 | 4.2:+11692436 | None:intergenic |
| ATGACGTGGAACTTTATTGC+TGG | 0.412949 | 4.2:-11688103 | MS.gene57344:CDS |
| AGAACTCTTGGCTGAAGATA+TGG | 0.415896 | 4.2:-11688137 | MS.gene57344:CDS |
| TTCGAAAGAGATGAAGTTGT+TGG | 0.418103 | 4.2:+11692414 | None:intergenic |
| TGACATTGTTGAGGATATCT+TGG | 0.419798 | 4.2:-11690094 | MS.gene57344:CDS |
| CAAGTGGAGCATCTTTGGTC+CGG | 0.421288 | 4.2:+11688020 | None:intergenic |
| TAATGTCAGGATGAATAATC+TGG | 0.421755 | 4.2:-11690474 | MS.gene57344:CDS |
| CTCCACTACGACATGGAATC+AGG | 0.422052 | 4.2:-11689366 | MS.gene57344:intron |
| TAGTTATGTGATGGATCAAC+TGG | 0.423265 | 4.2:-11692264 | MS.gene57344:CDS |
| GGAGGCGAGTGCGCGGGTGG+AGG | 0.425603 | 4.2:+11692544 | None:intergenic |
| GAAGGGGCATCTCTATATCC+TGG | 0.426176 | 4.2:+11689404 | None:intergenic |
| TATGGCATATGTTATGGATC+AGG | 0.432013 | 4.2:-11690916 | MS.gene57344:intron |
| GGTTGCTGAGCTTCCATTGG+TGG | 0.432492 | 4.2:-11691144 | MS.gene57344:CDS |
| ATGCAATGTTTCTGAAGTAT+TGG | 0.436879 | 4.2:-11689071 | MS.gene57344:CDS |
| ACCAAGAAGCCAACAACAAA+GGG | 0.436980 | 4.2:+11691164 | None:intergenic |
| AAAGATGCTCCACTTGGAGC+TGG | 0.439507 | 4.2:-11688013 | MS.gene57344:CDS |
| AAGTGGAGCATCTTTGGTCC+GGG | 0.440131 | 4.2:+11688021 | None:intergenic |
| TGTTGACATTTCACAGTCTC+TGG | 0.441936 | 4.2:-11690940 | MS.gene57344:CDS |
| TGGACCTGATATGCACTATA+TGG | 0.442505 | 4.2:-11688822 | MS.gene57344:intron |
| CGTTGAGATTTGAAGGTAAG+TGG | 0.443076 | 4.2:+11692665 | None:intergenic |
| ATACAGCATCCTGGAGTTGT+TGG | 0.443402 | 4.2:+11690043 | None:intergenic |
| GGTGGAGGAGAGGGTGAGGG+TGG | 0.448628 | 4.2:+11692559 | None:intergenic |
| GGTTAGCGTTGATGGTTTGA+AGG | 0.451992 | 4.2:+11692621 | None:intergenic |
| GCTTTCAGCAACCTTATTGA+AGG | 0.452369 | 4.2:-11688935 | MS.gene57344:CDS |
| GGAGTAAAGCACCTTCAATA+AGG | 0.452645 | 4.2:+11688924 | None:intergenic |
| CCGGTGATCGTCATCGGAAT+CGG | 0.453030 | 4.2:+11692592 | None:intergenic |
| CATGGGAAATTCAGACTCTT+CGG | 0.458256 | 4.2:-11691019 | MS.gene57344:CDS |
| CAATAAGGTTGCTGAAAGCC+TGG | 0.458375 | 4.2:+11688939 | None:intergenic |
| TGAGGGTGGTGGAATTGTTC+CGG | 0.459416 | 4.2:+11692573 | None:intergenic |
| CTTTCAAGCATTCAAACCTT+GGG | 0.461316 | 4.2:-11690350 | MS.gene57344:CDS |
| TGCTGGGCTGACTATTGCCC+GGG | 0.468123 | 4.2:-11688086 | MS.gene57344:CDS |
| CCTTTCCTCCAACATGTGTT+CGG | 0.472155 | 4.2:+11688903 | None:intergenic |
| TTGCTGGGCTGACTATTGCC+CGG | 0.473258 | 4.2:-11688087 | MS.gene57344:CDS |
| GAGTGCGCGGGTGGAGGAGA+GGG | 0.475562 | 4.2:+11692550 | None:intergenic |
| TCTGACTCAGCATCTCCTCC+AGG | 0.476951 | 4.2:+11692218 | None:intergenic |
| CTCGTACTTATTGATGATGA+TGG | 0.476992 | 4.2:-11688842 | MS.gene57344:CDS |
| GGCGGAGGCGAGTGCGCGGG+TGG | 0.478007 | 4.2:+11692541 | None:intergenic |
| ACTTTCAAGCATTCAAACCT+TGG | 0.479091 | 4.2:-11690351 | MS.gene57344:CDS |
| GCGGCATCGTTGAGATTTGA+AGG | 0.481008 | 4.2:+11692658 | None:intergenic |
| GGTTGAATAATCATGTATCT+GGG | 0.481046 | 4.2:-11691088 | MS.gene57344:CDS |
| GGGGAACTCGTGTAGAACTT+TGG | 0.482111 | 4.2:-11687991 | MS.gene57344:CDS |
| AAGATGCTCCACTTGGAGCT+GGG | 0.482234 | 4.2:-11688012 | MS.gene57344:CDS |
| CGAACCGATAAGAACGATTC+GGG | 0.486961 | 4.2:+11692383 | None:intergenic |
| TTCTGAAGTATTGGCAGACT+TGG | 0.488198 | 4.2:-11689062 | MS.gene57344:CDS |
| CGTCATCGGAATCGGAGTTA+GGG | 0.488788 | 4.2:+11692600 | None:intergenic |
| ACGAACCGATAAGAACGATT+CGG | 0.493218 | 4.2:+11692382 | None:intergenic |
| CGGGAGATACTGGAGAGTTA+TGG | 0.495754 | 4.2:-11688067 | MS.gene57344:CDS |
| AGTCGCTGAGTGAACTCGAC+GGG | 0.498448 | 4.2:+11692497 | None:intergenic |
| AATTCAGACTCTTCGGATCA+AGG | 0.498498 | 4.2:-11691012 | MS.gene57344:CDS |
| AAATCAATCAAGAAAATGAA+TGG | 0.502569 | 4.2:-11689544 | MS.gene57344:CDS |
| CATTTCACAGTCTCTGGCTA+TGG | 0.502587 | 4.2:-11690934 | MS.gene57344:CDS |
| CGTAGTGGAGCGAGAGCTAA+AGG | 0.502814 | 4.2:+11689379 | None:intergenic |
| AGGCAGAGTCGATGGAAATC+GGG | 0.503639 | 4.2:+11692437 | None:intergenic |
| GTGAAGTTGCACATACCAAC+CGG | 0.505078 | 4.2:+11690984 | None:intergenic |
| CAACATGGCAAAATAATGTC+AGG | 0.505416 | 4.2:-11690487 | MS.gene57344:CDS |
| AGTCGATGGAAATCGGGACT+AGG | 0.507935 | 4.2:+11692443 | None:intergenic |
| CGGAGGGTTGCAGTGTACCC+TGG | 0.509145 | 4.2:-11692236 | MS.gene57344:CDS |
| TCAGATTTAACAACTGCCAT+TGG | 0.509352 | 4.2:+11687965 | None:intergenic |
| CGAGTGCGCGGGTGGAGGAG+AGG | 0.509761 | 4.2:+11692549 | None:intergenic |
| TGATGTTCTCCAACAACTCC+AGG | 0.510841 | 4.2:-11690052 | MS.gene57344:CDS |
| ACCATACGGACAAGAACTCT+TGG | 0.514444 | 4.2:-11688149 | MS.gene57344:CDS |
| ATTGTTCCGGTGATCGTCAT+CGG | 0.516068 | 4.2:+11692586 | None:intergenic |
| GCCAAGAGTTCTTGTCCGTA+TGG | 0.518420 | 4.2:+11688148 | None:intergenic |
| AGAAGAACCTGCTCTGCGCC+AGG | 0.520287 | 4.2:-11688957 | MS.gene57344:CDS |
| CGGACCAAAGATGCTCCACT+TGG | 0.520699 | 4.2:-11688019 | MS.gene57344:CDS |
| ATGGTTTGAAGGAAACAAGA+AGG | 0.523393 | 4.2:+11692632 | None:intergenic |
| TTATTAACAGAGCCATCCCT+TGG | 0.525157 | 4.2:+11689469 | None:intergenic |
| AGTACGAGGGTGCCACCAGC+TGG | 0.526696 | 4.2:+11688857 | None:intergenic |
| TGGATTTGGATAAGAAGTCA+TGG | 0.530715 | 4.2:-11691037 | MS.gene57344:CDS |
| AAGGTTTGAATGCTTGAAAG+TGG | 0.533582 | 4.2:+11690353 | None:intergenic |
| CAGGTGTACGTTAGACCTGC+AGG | 0.533766 | 4.2:-11692287 | MS.gene57344:CDS |
| GACCGCACTTTCCGAACTGC+AGG | 0.535129 | 4.2:-11692132 | MS.gene57344:intron |
| TGAGCAACACACCTGCAGTT+CGG | 0.535417 | 4.2:+11692121 | None:intergenic |
| GTGTCTACTTCTGCACCAGC+TGG | 0.540665 | 4.2:-11688872 | MS.gene57344:CDS |
| GAATGGCGGAGGCGAGTGCG+CGG | 0.543708 | 4.2:+11692537 | None:intergenic |
| GCTTTACTCCGAACACATGT+TGG | 0.544894 | 4.2:-11688911 | MS.gene57344:CDS |
| GTTGTTGGAGGCAGAGTCGA+TGG | 0.546582 | 4.2:+11692429 | None:intergenic |
| GAAGGAAACAAGAAGGGTTG+CGG | 0.547746 | 4.2:+11692639 | None:intergenic |
| GGATTTGGATAAGAAGTCAT+GGG | 0.548844 | 4.2:-11691036 | MS.gene57344:CDS |
| AACAGCATTTGATCTTTGAT+CGG | 0.550290 | 4.2:+11690959 | None:intergenic |
| CATAACTCTCCAGTATCTCC+CGG | 0.551142 | 4.2:+11688068 | None:intergenic |
| GATGCTGAGTCAGACGAAGA+AGG | 0.554252 | 4.2:-11692209 | MS.gene57344:CDS |
| CCGATTCCGATGACGATCAC+CGG | 0.554284 | 4.2:-11692592 | MS.gene57344:CDS |
| AATGGCGGAGGCGAGTGCGC+GGG | 0.556940 | 4.2:+11692538 | None:intergenic |
| GTTGAGGATATCTTGGCGCT+AGG | 0.557376 | 4.2:-11690087 | MS.gene57344:CDS |
| ACCTGCAGGTAGTTATGTGA+TGG | 0.557710 | 4.2:-11692273 | MS.gene57344:CDS |
| AGATGCTCCACTTGGAGCTG+GGG | 0.559112 | 4.2:-11688011 | MS.gene57344:CDS |
| TGGATCAACTGGAGCTGCGG+AGG | 0.559128 | 4.2:-11692253 | MS.gene57344:CDS |
| TCTTCGGATCAAGGATGAGC+CGG | 0.561219 | 4.2:-11691003 | MS.gene57344:CDS |
| TTACTCCGAACACATGTTGG+AGG | 0.561301 | 4.2:-11688908 | MS.gene57344:CDS |
| TGTAGAACTTTGGCTTCCAA+TGG | 0.561959 | 4.2:-11687981 | MS.gene57344:CDS |
| TTGTCAAATATACAGCATCC+TGG | 0.564184 | 4.2:+11690034 | None:intergenic |
| GAGCGAGAGCTAAAGGTGGA+AGG | 0.564292 | 4.2:+11689386 | None:intergenic |
| GCGGGTGGAGGAGAGGGTGA+GGG | 0.565308 | 4.2:+11692556 | None:intergenic |
| TGGTTTGAAGGAAACAAGAA+GGG | 0.568078 | 4.2:+11692633 | None:intergenic |
| TAAAGCTGTAGTTCTTCCCA+TGG | 0.568418 | 4.2:-11691195 | MS.gene57344:CDS |
| AACCAAGAAGCCAACAACAA+AGG | 0.570684 | 4.2:+11691163 | None:intergenic |
| GAAAGAGATGAAGTTGTTGG+AGG | 0.572888 | 4.2:+11692417 | None:intergenic |
| AGCGAGAGCTAAAGGTGGAA+GGG | 0.573231 | 4.2:+11689387 | None:intergenic |
| TCCATCACATAACTACCTGC+AGG | 0.574411 | 4.2:+11692272 | None:intergenic |
| GCGAGAGCTAAAGGTGGAAG+GGG | 0.575580 | 4.2:+11689388 | None:intergenic |
| TGACGTGGAACTTTATTGCT+GGG | 0.576782 | 4.2:-11688102 | MS.gene57344:CDS |
| CTCGGCAGATCGCAATCCGG+AGG | 0.577786 | 4.2:+11692154 | None:intergenic |
| ATGCATTCACTCACACCATA+CGG | 0.579978 | 4.2:-11688163 | MS.gene57344:CDS |
| TTAGATAGTTCTCCAAGGGA+TGG | 0.580202 | 4.2:-11689481 | MS.gene57344:CDS |
| GCAGCAGCACTAAGAGAAAG+TGG | 0.582809 | 4.2:+11689427 | None:intergenic |
| GTTGAGATTTGAAGGTAAGT+GGG | 0.587743 | 4.2:+11692666 | None:intergenic |
| GGTCTCGGCAGATCGCAATC+CGG | 0.588364 | 4.2:+11692151 | None:intergenic |
| ATTGTTAGATAGTTCTCCAA+GGG | 0.588526 | 4.2:-11689485 | MS.gene57344:CDS |
| GATTTCATATGACATTGTTG+AGG | 0.588742 | 4.2:-11690103 | MS.gene57344:CDS |
| TCTACTTCTGCACCAGCTGG+TGG | 0.590389 | 4.2:-11688869 | MS.gene57344:CDS |
| GATGCTCCACTTGGAGCTGG+GGG | 0.590416 | 4.2:-11688010 | MS.gene57344:CDS |
| AAGGGGCATCTCTATATCCT+GGG | 0.593040 | 4.2:+11689405 | None:intergenic |
| TGTGTGAAGGGTCAAAGTGA+TGG | 0.593563 | 4.2:-11691110 | MS.gene57344:CDS |
| CCGAACACATGTTGGAGGAA+AGG | 0.593615 | 4.2:-11688903 | MS.gene57344:CDS |
| GAGCTCGAAACTTGTGTGAA+GGG | 0.594588 | 4.2:-11691122 | MS.gene57344:CDS |
| ACAAAGGGATGTTTAACCAT+GGG | 0.598210 | 4.2:+11691179 | None:intergenic |
| CAAGTTTCGAGCTCCACCAA+TGG | 0.598526 | 4.2:+11691131 | None:intergenic |
| GGAGACTTTACGAATGGCGG+AGG | 0.601002 | 4.2:+11692526 | None:intergenic |
| ATAACTCTCCAGTATCTCCC+GGG | 0.610095 | 4.2:+11688069 | None:intergenic |
| AACAAAGGGATGTTTAACCA+TGG | 0.615358 | 4.2:+11691178 | None:intergenic |
| TCTTCTACAGCAGCTAGCAA+AGG | 0.616929 | 4.2:+11688974 | None:intergenic |
| CTGACTCAGCATCTCCTCCA+GGG | 0.627098 | 4.2:+11692219 | None:intergenic |
| CGGATCAAGGATGAGCCGGT+TGG | 0.628083 | 4.2:-11690999 | MS.gene57344:CDS |
| GTGTGAAGGGTCAAAGTGAT+GGG | 0.633671 | 4.2:-11691109 | MS.gene57344:CDS |
| AATTGTTAGATAGTTCTCCA+AGG | 0.634239 | 4.2:-11689486 | MS.gene57344:CDS |
| GAATAATCATGTATCTGGGG+AGG | 0.635708 | 4.2:-11691084 | MS.gene57344:CDS |
| AATACTTCAGAAACATTGCA+TGG | 0.636997 | 4.2:+11689073 | None:intergenic |
| GGATCAACTGGAGCTGCGGA+GGG | 0.640471 | 4.2:-11692252 | MS.gene57344:CDS |
| GGAGCTCGAAACTTGTGTGA+AGG | 0.642867 | 4.2:-11691123 | MS.gene57344:CDS |
| CACCTGCAGTTCGGAAAGTG+CGG | 0.643201 | 4.2:+11692130 | None:intergenic |
| GAGTCGCTGAGTGAACTCGA+CGG | 0.644857 | 4.2:+11692496 | None:intergenic |
| AGTGGAGCATCTTTGGTCCG+GGG | 0.648290 | 4.2:+11688022 | None:intergenic |
| CATCATCATCAATAAGTACG+AGG | 0.649335 | 4.2:+11688843 | None:intergenic |
| TCGGCAGATCGCAATCCGGA+GGG | 0.650831 | 4.2:+11692155 | None:intergenic |
| GTTGAATAATCATGTATCTG+GGG | 0.655716 | 4.2:-11691087 | MS.gene57344:CDS |
| GCTCTCGCTCCACTACGACA+TGG | 0.656196 | 4.2:-11689373 | MS.gene57344:CDS |
| TACCTGATTCCATGTCGTAG+TGG | 0.661231 | 4.2:+11689364 | None:intergenic |
| ATCATCATCAATAAGTACGA+GGG | 0.670541 | 4.2:+11688844 | None:intergenic |
| GGTGGAGACTTTACGAATGG+CGG | 0.670767 | 4.2:+11692523 | None:intergenic |
| GGATGCTGTATATTTGACAA+AGG | 0.675769 | 4.2:-11690031 | MS.gene57344:intron |
| GGAGGTGGAGACTTTACGAA+TGG | 0.676470 | 4.2:+11692520 | None:intergenic |
| GTCGCTGAGTGAACTCGACG+GGG | 0.676595 | 4.2:+11692498 | None:intergenic |
| AGTGGAGCGAGAGCTAAAGG+TGG | 0.679241 | 4.2:+11689382 | None:intergenic |
| TGTTACTTCAGCAATCAACA+TGG | 0.683428 | 4.2:-11690502 | MS.gene57344:CDS |
| TGATGGATCAACTGGAGCTG+CGG | 0.683645 | 4.2:-11692256 | MS.gene57344:CDS |
| GAATGCTTGAAAGTGGACCA+CGG | 0.687124 | 4.2:+11690360 | None:intergenic |
| TCAAACACAAACCAGATCCG+TGG | 0.690750 | 4.2:-11690377 | MS.gene57344:intron |
| TCGCTGAGTGAACTCGACGG+GGG | 0.697652 | 4.2:+11692499 | None:intergenic |
| AGGGTTGCAGTGTACCCTGG+AGG | 0.708171 | 4.2:-11692233 | MS.gene57344:CDS |
| CACACAAACAAAGAAAAGCG+AGG | 0.726712 | 4.2:-11690315 | MS.gene57344:intron |
| TGGTTGAAGACAATATGACG+TGG | 0.731025 | 4.2:-11688117 | MS.gene57344:CDS |
| TCGTGCGCATTATATCACCC+CGG | 0.768678 | 4.2:-11688039 | MS.gene57344:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAATATTATTACCTTT+AGG | - | chr4.2:11691447-11691466 | MS.gene57344:intron | 15.0% |
| !! | AAACAATATTATTACCTTTA+GGG | - | chr4.2:11691448-11691467 | MS.gene57344:intron | 15.0% |
| !! | AACTATTAAAATCAACTAAA+AGG | - | chr4.2:11690908-11690927 | MS.gene57344:intron | 15.0% |
| !! | GAAAAAAAAAAAAAAAGGAA+AGG | + | chr4.2:11689896-11689915 | None:intergenic | 15.0% |
| !! | GAAAGGAAAAAAAAAAAAAA+AGG | + | chr4.2:11689901-11689920 | None:intergenic | 15.0% |
| !! | TTTAAATTTATCTCGAAAAA+CGG | + | chr4.2:11689145-11689164 | None:intergenic | 15.0% |
| !!! | CTTTGTTTATATAATAACAA+GGG | - | chr4.2:11689778-11689797 | MS.gene57344:intron | 15.0% |
| !!! | GTTAAATTTTCGTATAATTT+AGG | - | chr4.2:11689277-11689296 | MS.gene57344:intron | 15.0% |
| !!! | TTTTTTTTTTTGAGAAAAGT+GGG | - | chr4.2:11692037-11692056 | MS.gene57344:intron | 15.0% |
| !!! | TTTTTTTTTTTTGAGAAAAG+TGG | - | chr4.2:11692036-11692055 | MS.gene57344:intron | 15.0% |
| !! | AAAAAATTTCATATACCAGA+GGG | + | chr4.2:11689207-11689226 | None:intergenic | 20.0% |
| !! | AAAAGGATCAATTATATCTT+GGG | - | chr4.2:11689106-11689125 | MS.gene57344:intron | 20.0% |
| !! | AAATCAATCAAGAAAATGAA+TGG | - | chr4.2:11691109-11691128 | MS.gene57344:CDS | 20.0% |
| !! | CACAATTAATGATTAGAATA+AGG | + | chr4.2:11689025-11689044 | None:intergenic | 20.0% |
| !! | CATAATTATATACACATTGA+AGG | + | chr4.2:11691373-11691392 | None:intergenic | 20.0% |
| !! | GTTAATAAAATGCATAAATC+TGG | - | chr4.2:11691199-11691218 | MS.gene57344:CDS | 20.0% |
| !! | TGAAGATAAAAAATTTCCAA+AGG | + | chr4.2:11690721-11690740 | None:intergenic | 20.0% |
| !! | TTAAATTTATCTCGAAAAAC+GGG | + | chr4.2:11689144-11689163 | None:intergenic | 20.0% |
| !! | TTAATTGATAAATTGCTGAA+CGG | - | chr4.2:11688322-11688341 | MS.gene57344:intron | 20.0% |
| !! | TTATAAATTGACAGATTCTA+TGG | + | chr4.2:11689239-11689258 | None:intergenic | 20.0% |
| !! | TTATATTATTGATGCAACAT+TGG | + | chr4.2:11691429-11691448 | None:intergenic | 20.0% |
| !! | TTATTTACTCTTATTGTTGT+TGG | - | chr4.2:11689375-11689394 | MS.gene57344:CDS | 20.0% |
| !! | TTGAAATAAGAAAATAATGC+AGG | - | chr4.2:11691008-11691027 | MS.gene57344:CDS | 20.0% |
| !!! | ATATTATTAGGGTGATTTTA+TGG | + | chr4.2:11692268-11692287 | None:intergenic | 20.0% |
| !!! | GCTTTGTTTATATAATAACA+AGG | - | chr4.2:11689777-11689796 | MS.gene57344:intron | 20.0% |
| !!! | TAACTTTAAAAGCACAAATT+CGG | + | chr4.2:11689923-11689942 | None:intergenic | 20.0% |
| !!! | TGATTAGAATAAGGTTATTT+TGG | + | chr4.2:11689016-11689035 | None:intergenic | 20.0% |
| !!! | TTCTATTTTCGTATACTTTA+GGG | - | chr4.2:11689328-11689347 | MS.gene57344:intron | 20.0% |
| !!! | TTTCTATTTTCGTATACTTT+AGG | - | chr4.2:11689327-11689346 | MS.gene57344:intron | 20.0% |
| ! | AACTATTATCACACATATGT+GGG | - | chr4.2:11690655-11690674 | MS.gene57344:intron | 25.0% |
| ! | AAGGCACATTAATTGATTAT+TGG | + | chr4.2:11690702-11690721 | None:intergenic | 25.0% |
| ! | AATTATATACACATTGAAGG+TGG | + | chr4.2:11691370-11691389 | None:intergenic | 25.0% |
| ! | ACTCAATCAAAGAATTGTTT+AGG | + | chr4.2:11692366-11692385 | None:intergenic | 25.0% |
| ! | ATAATAACAGCAATGTTAAC+AGG | - | chr4.2:11689255-11689274 | MS.gene57344:intron | 25.0% |
| ! | ATAATCAATTAATGTGCCTT+TGG | - | chr4.2:11690702-11690721 | MS.gene57344:intron | 25.0% |
| ! | ATACTTTCACAGTACAAAAA+TGG | + | chr4.2:11690975-11690994 | None:intergenic | 25.0% |
| ! | ATAGGTTACATACATAAACA+TGG | + | chr4.2:11689058-11689077 | None:intergenic | 25.0% |
| ! | ATAGTTTATAGAGACCAAAT+TGG | + | chr4.2:11690894-11690913 | None:intergenic | 25.0% |
| ! | ATCAATCTAATTCATAGAAG+TGG | + | chr4.2:11689975-11689994 | None:intergenic | 25.0% |
| ! | ATCTTATTCATTTCCTTGAT+TGG | - | chr4.2:11690797-11690816 | MS.gene57344:intron | 25.0% |
| ! | ATTCTGATTCTGTTATGTTA+AGG | - | chr4.2:11688554-11688573 | MS.gene57344:intron | 25.0% |
| ! | CAAAGAATTGTTTAGGTAAA+GGG | + | chr4.2:11692359-11692378 | None:intergenic | 25.0% |
| ! | GAAAAAATTTCATATACCAG+AGG | + | chr4.2:11689208-11689227 | None:intergenic | 25.0% |
| ! | GAAAAGGATCAATTATATCT+TGG | - | chr4.2:11689105-11689124 | MS.gene57344:intron | 25.0% |
| ! | GCTATAGAGAAATCAATTTA+AGG | + | chr4.2:11690026-11690045 | None:intergenic | 25.0% |
| ! | TAGTTAAACTACTAAAGAGT+AGG | - | chr4.2:11689166-11689185 | MS.gene57344:intron | 25.0% |
| ! | TCAAAAAGAAAATACCCTAA+AGG | + | chr4.2:11691465-11691484 | None:intergenic | 25.0% |
| ! | TCAAAGAATTGTTTAGGTAA+AGG | + | chr4.2:11692360-11692379 | None:intergenic | 25.0% |
| ! | TTATTCATTCGTTGTGTAAT+TGG | - | chr4.2:11690493-11690512 | MS.gene57344:CDS | 25.0% |
| ! | TTCTTATCCAAATCCAAAAA+AGG | + | chr4.2:11689612-11689631 | None:intergenic | 25.0% |
| ! | TTGGATGATAGTAAAGTTTA+GGG | + | chr4.2:11690935-11690954 | None:intergenic | 25.0% |
| ! | TTTGGAAGGAGATATTATTA+GGG | + | chr4.2:11692279-11692298 | None:intergenic | 25.0% |
| !! | AACAATTTTCTTGTAGATCA+AGG | + | chr4.2:11690828-11690847 | None:intergenic | 25.0% |
| !! | GTATGATATCTTTTAAACCT+AGG | - | chr4.2:11692330-11692349 | MS.gene57344:intron | 25.0% |
| !! | TCTATTTTCGTATACTTTAG+GGG | - | chr4.2:11689329-11689348 | MS.gene57344:intron | 25.0% |
| !!! | ATTTTAACGATCAATACTTG+AGG | + | chr4.2:11688609-11688628 | None:intergenic | 25.0% |
| !!! | CAATCTCTAGTTTGTTAAAA+AGG | + | chr4.2:11691900-11691919 | None:intergenic | 25.0% |
| !!! | GGAAATTAGTGCTTATTTTT+TGG | - | chr4.2:11692140-11692159 | MS.gene57344:CDS | 25.0% |
| !!! | TAAGGTTAGTTTTTGATACT+TGG | - | chr4.2:11690074-11690093 | MS.gene57344:CDS | 25.0% |
| !!! | TTAGTTTTTGATACTTGGTA+TGG | - | chr4.2:11690079-11690098 | MS.gene57344:CDS | 25.0% |
| !!! | TTTAGGGTATTTTCTTTTTG+AGG | - | chr4.2:11691464-11691483 | MS.gene57344:intron | 25.0% |
| AAACTACTAAAGAGTAGGAA+TGG | - | chr4.2:11689171-11689190 | MS.gene57344:intron | 30.0% | |
| AACAGCATTTGATCTTTGAT+CGG | + | chr4.2:11689697-11689716 | None:intergenic | 30.0% | |
| AAGAAAATAATGCAGGTACA+TGG | - | chr4.2:11691015-11691034 | MS.gene57344:CDS | 30.0% | |
| AATACTTCAGAAACATTGCA+TGG | + | chr4.2:11691583-11691602 | None:intergenic | 30.0% | |
| AATCTAATTCATAGAAGTGG+TGG | + | chr4.2:11689972-11689991 | None:intergenic | 30.0% | |
| AATGTTCTACAAGTACATAG+AGG | + | chr4.2:11690758-11690777 | None:intergenic | 30.0% | |
| AATTGAGTACTTTGTTGCAA+GGG | - | chr4.2:11692415-11692434 | MS.gene57344:CDS | 30.0% | |
| AATTGTTAGATAGTTCTCCA+AGG | - | chr4.2:11691167-11691186 | MS.gene57344:CDS | 30.0% | |
| ACGATTTCATGACAGTTATA+AGG | - | chr4.2:11690056-11690075 | MS.gene57344:CDS | 30.0% | |
| ACTATTATCACACATATGTG+GGG | - | chr4.2:11690656-11690675 | MS.gene57344:intron | 30.0% | |
| AGCAAAATTAGAACATGCTA+AGG | + | chr4.2:11690252-11690271 | None:intergenic | 30.0% | |
| ATCATCATCAATAAGTACGA+GGG | + | chr4.2:11691812-11691831 | None:intergenic | 30.0% | |
| ATTGTTAGATAGTTCTCCAA+GGG | - | chr4.2:11691168-11691187 | MS.gene57344:CDS | 30.0% | |
| CAACATTGGAGTTTATAAGA+CGG | + | chr4.2:11691415-11691434 | None:intergenic | 30.0% | |
| CAACCTTAACCTACAATTAA+CGG | + | chr4.2:11689428-11689447 | None:intergenic | 30.0% | |
| CAACTATTATCACACATATG+TGG | - | chr4.2:11690654-11690673 | MS.gene57344:intron | 30.0% | |
| CACCTATACTACAAGATATT+GGG | + | chr4.2:11689082-11689101 | None:intergenic | 30.0% | |
| GATTTCATATGACATTGTTG+AGG | - | chr4.2:11690550-11690569 | MS.gene57344:intron | 30.0% | |
| GCACTAATTTCCTCAAAAAA+TGG | + | chr4.2:11692132-11692151 | None:intergenic | 30.0% | |
| GGTTGAATAATCATGTATCT+GGG | - | chr4.2:11689565-11689584 | MS.gene57344:CDS | 30.0% | |
| GTTGAATAATCATGTATCTG+GGG | - | chr4.2:11689566-11689585 | MS.gene57344:CDS | 30.0% | |
| GTTGGATGATAGTAAAGTTT+AGG | + | chr4.2:11690936-11690955 | None:intergenic | 30.0% | |
| GTTTGGAAGGAGATATTATT+AGG | + | chr4.2:11692280-11692299 | None:intergenic | 30.0% | |
| TAATGTCAGGATGAATAATC+TGG | - | chr4.2:11690179-11690198 | MS.gene57344:intron | 30.0% | |
| TAATTGAGTACTTTGTTGCA+AGG | - | chr4.2:11692414-11692433 | MS.gene57344:CDS | 30.0% | |
| TACTAACGTTTGGAAATAGA+GGG | + | chr4.2:11688940-11688959 | None:intergenic | 30.0% | |
| TACTACAAGATATTGGGAAT+AGG | + | chr4.2:11689076-11689095 | None:intergenic | 30.0% | |
| TCAGGTTTATATACTTCATC+TGG | - | chr4.2:11689755-11689774 | MS.gene57344:intron | 30.0% | |
| TCATGAAATCGTACAACAAA+CGG | + | chr4.2:11690048-11690067 | None:intergenic | 30.0% | |
| TCGCATCATTCAATAAACTA+GGG | - | chr4.2:11688297-11688316 | MS.gene57344:intron | 30.0% | |
| TGACATAGTAAAGTTTAACC+AGG | + | chr4.2:11690449-11690468 | None:intergenic | 30.0% | |
| TTATCCAAATCCAAAAAAGG+AGG | + | chr4.2:11689609-11689628 | None:intergenic | 30.0% | |
| TTCCCAATATCTTGTAGTAT+AGG | - | chr4.2:11689077-11689096 | MS.gene57344:CDS | 30.0% | |
| TTCGCATCATTCAATAAACT+AGG | - | chr4.2:11688296-11688315 | MS.gene57344:intron | 30.0% | |
| ! | ATTTGGAACGTTTAATTCCA+TGG | - | chr4.2:11691976-11691995 | MS.gene57344:intron | 30.0% |
| ! | CTTATTGTTGTTGGTAAGTA+GGG | - | chr4.2:11689384-11689403 | MS.gene57344:CDS | 30.0% |
| ! | TCTTATTGTTGTTGGTAAGT+AGG | - | chr4.2:11689383-11689402 | MS.gene57344:CDS | 30.0% |
| ! | TGTTGTTGTTGTAATTCCAT+GGG | - | chr4.2:11692079-11692098 | MS.gene57344:intron | 30.0% |
| ! | TTAAAAGCACAAATTCGGAA+AGG | + | chr4.2:11689918-11689937 | None:intergenic | 30.0% |
| ! | TTGTTGTTGTTGTAATTCCA+TGG | - | chr4.2:11692078-11692097 | MS.gene57344:intron | 30.0% |
| ! | TTTGGAACGTTTAATTCCAT+GGG | - | chr4.2:11691977-11691996 | MS.gene57344:intron | 30.0% |
| !! | ATGCAATGTTTCTGAAGTAT+TGG | - | chr4.2:11691582-11691601 | MS.gene57344:intron | 30.0% |
| !! | TTTTTGAGAAAAGTGGGATA+AGG | - | chr4.2:11692043-11692062 | MS.gene57344:intron | 30.0% |
| !!! | TATGCTTTTTTGTTGATGTC+AGG | - | chr4.2:11691553-11691572 | MS.gene57344:intron | 30.0% |
| !!! | TTATTCACTTCCTCCTTTTT+TGG | - | chr4.2:11689596-11689615 | MS.gene57344:intron | 30.0% |
| AACAAAGGGATGTTTAACCA+TGG | + | chr4.2:11689478-11689497 | None:intergenic | 35.0% | |
| AACCTTAAGCTACTAACGTT+TGG | + | chr4.2:11688950-11688969 | None:intergenic | 35.0% | |
| AAGGTTTGAATGCTTGAAAG+TGG | + | chr4.2:11690303-11690322 | None:intergenic | 35.0% | |
| ACAAAGGGATGTTTAACCAT+GGG | + | chr4.2:11689477-11689496 | None:intergenic | 35.0% | |
| ACTTTCAAGCATTCAAACCT+TGG | - | chr4.2:11690302-11690321 | MS.gene57344:intron | 35.0% | |
| AGAACTACAGCTTTACATTC+AGG | + | chr4.2:11689453-11689472 | None:intergenic | 35.0% | |
| AGGTTAGAAAGAGTGACTTA+TGG | + | chr4.2:11690429-11690448 | None:intergenic | 35.0% | |
| ATAAGTCACTCTTTCTAACC+TGG | - | chr4.2:11690428-11690447 | MS.gene57344:intron | 35.0% | |
| ATGGTTTGAAGGAAACAAGA+AGG | + | chr4.2:11688024-11688043 | None:intergenic | 35.0% | |
| CAACATGGCAAAATAATGTC+AGG | - | chr4.2:11690166-11690185 | MS.gene57344:intron | 35.0% | |
| CATCATCATCAATAAGTACG+AGG | + | chr4.2:11691813-11691832 | None:intergenic | 35.0% | |
| CCAATATCTTGTAGTATAGG+TGG | - | chr4.2:11689080-11689099 | MS.gene57344:intron | 35.0% | |
| CCACCTATACTACAAGATAT+TGG | + | chr4.2:11689083-11689102 | None:intergenic | 35.0% | |
| CTACTAACGTTTGGAAATAG+AGG | + | chr4.2:11688941-11688960 | None:intergenic | 35.0% | |
| CTTTCAAGCATTCAAACCTT+GGG | - | chr4.2:11690303-11690322 | MS.gene57344:intron | 35.0% | |
| GATCAAGGAAAATCCAATCA+AGG | + | chr4.2:11690813-11690832 | None:intergenic | 35.0% | |
| GATTGAGTACTTTGTTGCAA+GGG | - | chr4.2:11692378-11692397 | MS.gene57344:intron | 35.0% | |
| GGATGCTGTATATTTGACAA+AGG | - | chr4.2:11690622-11690641 | MS.gene57344:intron | 35.0% | |
| GGATTTGGATAAGAAGTCAT+GGG | - | chr4.2:11689617-11689636 | MS.gene57344:intron | 35.0% | |
| GGGTTGAATAATCATGTATC+TGG | - | chr4.2:11689564-11689583 | MS.gene57344:CDS | 35.0% | |
| GTAACATTGCTTTCTGCAAA+CGG | + | chr4.2:11690137-11690156 | None:intergenic | 35.0% | |
| GTTACCATATAGTGCATATC+AGG | + | chr4.2:11691838-11691857 | None:intergenic | 35.0% | |
| GTTGAGATTTGAAGGTAAGT+GGG | + | chr4.2:11687990-11688009 | None:intergenic | 35.0% | |
| TACTAAAGAGTAGGAATGGA+GGG | - | chr4.2:11689175-11689194 | MS.gene57344:intron | 35.0% | |
| TATGGCATATGTTATGGATC+AGG | - | chr4.2:11689737-11689756 | MS.gene57344:intron | 35.0% | |
| TATGTCAGTTCTATAACGAG+TGG | - | chr4.2:11690462-11690481 | MS.gene57344:intron | 35.0% | |
| TCAGATTTAACAACTGCCAT+TGG | + | chr4.2:11692691-11692710 | None:intergenic | 35.0% | |
| TGACATTGTTGAGGATATCT+TGG | - | chr4.2:11690559-11690578 | MS.gene57344:intron | 35.0% | |
| TGACCGTTAATTGTAGGTTA+AGG | - | chr4.2:11689422-11689441 | MS.gene57344:CDS | 35.0% | |
| TGATTGAGTACTTTGTTGCA+AGG | - | chr4.2:11692377-11692396 | MS.gene57344:intron | 35.0% | |
| TGCTAAGGCTAAGAATAAAG+AGG | + | chr4.2:11690237-11690256 | None:intergenic | 35.0% | |
| TGGATTTGGATAAGAAGTCA+TGG | - | chr4.2:11689616-11689635 | MS.gene57344:intron | 35.0% | |
| TGGTTTGAAGGAAACAAGAA+GGG | + | chr4.2:11688023-11688042 | None:intergenic | 35.0% | |
| TGTAGTATAGGTGGAAGAAA+AGG | - | chr4.2:11689089-11689108 | MS.gene57344:intron | 35.0% | |
| TTAACCTACAATTAACGGTC+AGG | + | chr4.2:11689423-11689442 | None:intergenic | 35.0% | |
| TTCCAAACGTTAGTAGCTTA+AGG | - | chr4.2:11688945-11688964 | MS.gene57344:CDS | 35.0% | |
| TTCGAAAGAGATGAAGTTGT+TGG | + | chr4.2:11688242-11688261 | None:intergenic | 35.0% | |
| TTGCAAGGGATTTGTGAAAA+TGG | - | chr4.2:11692429-11692448 | MS.gene57344:CDS | 35.0% | |
| TTGGTATGGACCTAAATTTC+TGG | - | chr4.2:11690093-11690112 | MS.gene57344:CDS | 35.0% | |
| TTGTCAAATATACAGCATCC+TGG | + | chr4.2:11690622-11690641 | None:intergenic | 35.0% | |
| ! | AAAAAGGAAAGTGCATAAGC+AGG | + | chr4.2:11691884-11691903 | None:intergenic | 35.0% |
| ! | AAAAGGAAAGTGCATAAGCA+GGG | + | chr4.2:11691883-11691902 | None:intergenic | 35.0% |
| ! | AGAGTTTTTGTCCAATATGC+AGG | - | chr4.2:11691063-11691082 | MS.gene57344:CDS | 35.0% |
| ! | CAGAATATTAGCCTGCATAT+TGG | + | chr4.2:11691077-11691096 | None:intergenic | 35.0% |
| ! | GTTAAACATCCCTTTGTTGT+TGG | - | chr4.2:11689480-11689499 | MS.gene57344:CDS | 35.0% |
| ! | TCACACTTCTTGGATTTTGT+TGG | - | chr4.2:11689843-11689862 | MS.gene57344:intron | 35.0% |
| ! | TGTTACTTCAGCAATCAACA+TGG | - | chr4.2:11690151-11690170 | MS.gene57344:intron | 35.0% |
| !! | AGTCATTTTAATGTTCCCTC+CGG | - | chr4.2:11688483-11688502 | MS.gene57344:intron | 35.0% |
| !! | CTCGTACTTATTGATGATGA+TGG | - | chr4.2:11691811-11691830 | MS.gene57344:intron | 35.0% |
| !! | TAGTTATGTGATGGATCAAC+TGG | - | chr4.2:11688389-11688408 | MS.gene57344:intron | 35.0% |
| !! | TTTTCTTTGTTTGTGTGGAC+AGG | + | chr4.2:11690335-11690354 | None:intergenic | 35.0% |
| !!! | ACAACTGATGCCATTTTTTG+AGG | - | chr4.2:11692119-11692138 | MS.gene57344:intron | 35.0% |
| !!! | ACTTCCTCCTTTTTTGGATT+TGG | - | chr4.2:11689602-11689621 | MS.gene57344:intron | 35.0% |
| AAAGTTGCATACAGTACGTG+GGG | + | chr4.2:11692196-11692215 | None:intergenic | 40.0% | |
| AACCAAGAAGCCAACAACAA+AGG | + | chr4.2:11689493-11689512 | None:intergenic | 40.0% | |
| AACGTTTAATTCCATGGGCT+GGG | - | chr4.2:11691982-11692001 | MS.gene57344:intron | 40.0% | |
| AATTCAGACTCTTCGGATCA+AGG | - | chr4.2:11689641-11689660 | MS.gene57344:intron | 40.0% | |
| ACCAAGAAGCCAACAACAAA+GGG | + | chr4.2:11689492-11689511 | None:intergenic | 40.0% | |
| ACGAACCGATAAGAACGATT+CGG | + | chr4.2:11688274-11688293 | None:intergenic | 40.0% | |
| AGAACTCTTGGCTGAAGATA+TGG | - | chr4.2:11692516-11692535 | MS.gene57344:CDS | 40.0% | |
| AGAGTGACTTATGGCAGATA+TGG | + | chr4.2:11690420-11690439 | None:intergenic | 40.0% | |
| ATGACGTGGAACTTTATTGC+TGG | - | chr4.2:11692550-11692569 | MS.gene57344:CDS | 40.0% | |
| ATGCATTCACTCACACCATA+CGG | - | chr4.2:11692490-11692509 | MS.gene57344:CDS | 40.0% | |
| CAAAGTTGCATACAGTACGT+GGG | + | chr4.2:11692197-11692216 | None:intergenic | 40.0% | |
| CACACAAACAAAGAAAAGCG+AGG | - | chr4.2:11690338-11690357 | MS.gene57344:CDS | 40.0% | |
| CATGGGAAATTCAGACTCTT+CGG | - | chr4.2:11689634-11689653 | MS.gene57344:intron | 40.0% | |
| CGTTGAGATTTGAAGGTAAG+TGG | + | chr4.2:11687991-11688010 | None:intergenic | 40.0% | |
| CTACTAAAGAGTAGGAATGG+AGG | - | chr4.2:11689174-11689193 | MS.gene57344:intron | 40.0% | |
| CTATCACCATCTCACCAATT+TGG | - | chr4.2:11690877-11690896 | MS.gene57344:intron | 40.0% | |
| CTCGAAAAACATCGCAGAAA+CGG | - | chr4.2:11688177-11688196 | MS.gene57344:intron | 40.0% | |
| GAAAGAGATGAAGTTGTTGG+AGG | + | chr4.2:11688239-11688258 | None:intergenic | 40.0% | |
| GAATAATCATGTATCTGGGG+AGG | - | chr4.2:11689569-11689588 | MS.gene57344:CDS | 40.0% | |
| GATATGCTTGTCACACTTCT+TGG | - | chr4.2:11689833-11689852 | MS.gene57344:intron | 40.0% | |
| GCTTTCAGCAACCTTATTGA+AGG | - | chr4.2:11691718-11691737 | MS.gene57344:intron | 40.0% | |
| GGGTAAGTCTATGAAGATGT+GGG | - | chr4.2:11692238-11692257 | MS.gene57344:CDS | 40.0% | |
| GGTAAGTCTATGAAGATGTG+GGG | - | chr4.2:11692239-11692258 | MS.gene57344:CDS | 40.0% | |
| GGTCAGTAGAAACTTTGAGT+TGG | + | chr4.2:11690954-11690973 | None:intergenic | 40.0% | |
| GGTGAGATGGTGATAGTTTA+GGG | + | chr4.2:11690873-11690892 | None:intergenic | 40.0% | |
| GTTTAGGTAAAGGGTTTCCT+AGG | + | chr4.2:11692350-11692369 | None:intergenic | 40.0% | |
| TAAAGCTGTAGTTCTTCCCA+TGG | - | chr4.2:11689458-11689477 | MS.gene57344:CDS | 40.0% | |
| TAGAGACCAAATTGGTGAGA+TGG | + | chr4.2:11690886-11690905 | None:intergenic | 40.0% | |
| TATACTGTCTATACAGCCCA+TGG | + | chr4.2:11692098-11692117 | None:intergenic | 40.0% | |
| TCTGGCTATGGCATATGTTA+TGG | - | chr4.2:11689731-11689750 | MS.gene57344:intron | 40.0% | |
| TGACGTGGAACTTTATTGCT+GGG | - | chr4.2:11692551-11692570 | MS.gene57344:CDS | 40.0% | |
| TGGAATCAGGTAGGTTTGAT+TGG | - | chr4.2:11691300-11691319 | MS.gene57344:intron | 40.0% | |
| TGGACCTGATATGCACTATA+TGG | - | chr4.2:11691831-11691850 | MS.gene57344:intron | 40.0% | |
| TGGTGAGATGGTGATAGTTT+AGG | + | chr4.2:11690874-11690893 | None:intergenic | 40.0% | |
| TGGTTGAAGACAATATGACG+TGG | - | chr4.2:11692536-11692555 | MS.gene57344:CDS | 40.0% | |
| TGTTGACATTTCACAGTCTC+TGG | - | chr4.2:11689713-11689732 | MS.gene57344:intron | 40.0% | |
| TTAGATAGTTCTCCAAGGGA+TGG | - | chr4.2:11691172-11691191 | MS.gene57344:CDS | 40.0% | |
| TTATTAACAGAGCCATCCCT+TGG | + | chr4.2:11691187-11691206 | None:intergenic | 40.0% | |
| TTGTGCAGCAAGGAAATGTT+TGG | + | chr4.2:11692297-11692316 | None:intergenic | 40.0% | |
| ! | AAAGGAAAGTGCATAAGCAG+GGG | + | chr4.2:11691882-11691901 | None:intergenic | 40.0% |
| ! | CTTCTTGGATTTTGTTGGAG+TGG | - | chr4.2:11689848-11689867 | MS.gene57344:intron | 40.0% |
| ! | GGAGTAAAGCACCTTCAATA+AGG | + | chr4.2:11691732-11691751 | None:intergenic | 40.0% |
| ! | TGTAGAACTTTGGCTTCCAA+TGG | - | chr4.2:11692672-11692691 | MS.gene57344:CDS | 40.0% |
| !! | CGTTTTTGATTCTGAGCAAG+AGG | + | chr4.2:11691631-11691650 | None:intergenic | 40.0% |
| !! | CTCGCTTTTCTTTGTTTGTG+TGG | + | chr4.2:11690340-11690359 | None:intergenic | 40.0% |
| !! | GACCTAAATTTCTGGCTCAT+CGG | - | chr4.2:11690101-11690120 | MS.gene57344:CDS | 40.0% |
| !! | TCGTTTTTGTTGTGTTGTGC+AGG | - | chr4.2:11688347-11688366 | MS.gene57344:intron | 40.0% |
| !! | TTCTGAAGTATTGGCAGACT+TGG | - | chr4.2:11691591-11691610 | MS.gene57344:intron | 40.0% |
| AAACTCTACATCAGACGCAC+TGG | + | chr4.2:11691050-11691069 | None:intergenic | 45.0% | |
| AACGTTCCAAATTTCCCCAC+AGG | + | chr4.2:11691968-11691987 | None:intergenic | 45.0% | |
| ACCATACGGACAAGAACTCT+TGG | - | chr4.2:11692504-11692523 | MS.gene57344:CDS | 45.0% | |
| ACCTGCAGGTAGTTATGTGA+TGG | - | chr4.2:11688380-11688399 | MS.gene57344:intron | 45.0% | |
| ACTACGACATGGAATCAGGT+AGG | - | chr4.2:11691291-11691310 | MS.gene57344:intron | 45.0% | |
| AGACGGCAGAATTCACAGAA+TGG | + | chr4.2:11691398-11691417 | None:intergenic | 45.0% | |
| ATAACTCTCCAGTATCTCCC+GGG | + | chr4.2:11692587-11692606 | None:intergenic | 45.0% | |
| ATACAGCATCCTGGAGTTGT+TGG | + | chr4.2:11690613-11690632 | None:intergenic | 45.0% | |
| ATGCTTCGCAGTAGTATCTC+GGG | - | chr4.2:11692218-11692237 | MS.gene57344:CDS | 45.0% | |
| ATTGTTCCGGTGATCGTCAT+CGG | + | chr4.2:11688070-11688089 | None:intergenic | 45.0% | |
| CAATAAGGTTGCTGAAAGCC+TGG | + | chr4.2:11691717-11691736 | None:intergenic | 45.0% | |
| CACCGATGAGCCAGAAATTT+AGG | + | chr4.2:11690106-11690125 | None:intergenic | 45.0% | |
| CATAACTCTCCAGTATCTCC+CGG | + | chr4.2:11692588-11692607 | None:intergenic | 45.0% | |
| CATGCTTCGCAGTAGTATCT+CGG | - | chr4.2:11692217-11692236 | MS.gene57344:CDS | 45.0% | |
| CATTTCACAGTCTCTGGCTA+TGG | - | chr4.2:11689719-11689738 | MS.gene57344:intron | 45.0% | |
| CCTTTCCTCCAACATGTGTT+CGG | + | chr4.2:11691753-11691772 | None:intergenic | 45.0% | |
| CGAACCGATAAGAACGATTC+GGG | + | chr4.2:11688273-11688292 | None:intergenic | 45.0% | |
| CGGGTAAGTCTATGAAGATG+TGG | - | chr4.2:11692237-11692256 | MS.gene57344:CDS | 45.0% | |
| CGTTCCCGAATCGTTCTTAT+CGG | - | chr4.2:11688266-11688285 | MS.gene57344:intron | 45.0% | |
| GAACGTTTAATTCCATGGGC+TGG | - | chr4.2:11691981-11692000 | MS.gene57344:intron | 45.0% | |
| GAAGGAAACAAGAAGGGTTG+CGG | + | chr4.2:11688017-11688036 | None:intergenic | 45.0% | |
| GAATGCTTGAAAGTGGACCA+CGG | + | chr4.2:11690296-11690315 | None:intergenic | 45.0% | |
| GAGAAAAGTGGGATAAGGCT+TGG | - | chr4.2:11692048-11692067 | MS.gene57344:intron | 45.0% | |
| GAGCTCGAAACTTGTGTGAA+GGG | - | chr4.2:11689531-11689550 | MS.gene57344:CDS | 45.0% | |
| GCAAAGTTGCATACAGTACG+TGG | + | chr4.2:11692198-11692217 | None:intergenic | 45.0% | |
| GCAGCAAGGAAATGTTTGGA+AGG | + | chr4.2:11692293-11692312 | None:intergenic | 45.0% | |
| GCTCAAATCTTTGTGCAGCA+AGG | + | chr4.2:11692307-11692326 | None:intergenic | 45.0% | |
| GCTTTACTCCGAACACATGT+TGG | - | chr4.2:11691742-11691761 | MS.gene57344:intron | 45.0% | |
| GTCAGTTCTATAACGAGTGG+TGG | - | chr4.2:11690465-11690484 | MS.gene57344:intron | 45.0% | |
| GTGAAGTTGCACATACCAAC+CGG | + | chr4.2:11689672-11689691 | None:intergenic | 45.0% | |
| GTGTGAAGGGTCAAAGTGAT+GGG | - | chr4.2:11689544-11689563 | MS.gene57344:CDS | 45.0% | |
| TACCTGATTCCATGTCGTAG+TGG | + | chr4.2:11691292-11691311 | None:intergenic | 45.0% | |
| TCAAACACAAACCAGATCCG+TGG | - | chr4.2:11690276-11690295 | MS.gene57344:intron | 45.0% | |
| TCATGACCTGTGGGGAAATT+TGG | - | chr4.2:11691959-11691978 | MS.gene57344:intron | 45.0% | |
| TCCATCACATAACTACCTGC+AGG | + | chr4.2:11688384-11688403 | None:intergenic | 45.0% | |
| TCTTCTACAGCAGCTAGCAA+AGG | + | chr4.2:11691682-11691701 | None:intergenic | 45.0% | |
| TGAGCCTGACCGTTAATTGT+AGG | - | chr4.2:11689416-11689435 | MS.gene57344:CDS | 45.0% | |
| TGATGTTCTCCAACAACTCC+AGG | - | chr4.2:11690601-11690620 | MS.gene57344:intron | 45.0% | |
| TGTGTGAAGGGTCAAAGTGA+TGG | - | chr4.2:11689543-11689562 | MS.gene57344:CDS | 45.0% | |
| TTACTCCGAACACATGTTGG+AGG | - | chr4.2:11691745-11691764 | MS.gene57344:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4.2:11692010-11692029 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4.2:11692011-11692030 | None:intergenic | 45.0% |
| ! | CGGATCTGGTTTGTGTTTGA+AGG | + | chr4.2:11690276-11690295 | None:intergenic | 45.0% |
| ! | GTATACTTTAGGGGCTGTGT+AGG | - | chr4.2:11689338-11689357 | MS.gene57344:intron | 45.0% |
| ! | TGTGGACAGGATTTTACCCA+AGG | + | chr4.2:11690322-11690341 | None:intergenic | 45.0% |
| !! | AAGGGGCATCTCTATATCCT+GGG | + | chr4.2:11691251-11691270 | None:intergenic | 45.0% |
| !! | GGTTAGCGTTGATGGTTTGA+AGG | + | chr4.2:11688035-11688054 | None:intergenic | 45.0% |
| !! | TCCCTTTGTTGTTGGCTTCT+TGG | - | chr4.2:11689488-11689507 | MS.gene57344:CDS | 45.0% |
| AAAGATGCTCCACTTGGAGC+TGG | - | chr4.2:11692640-11692659 | MS.gene57344:CDS | 50.0% | |
| AAGATGCTCCACTTGGAGCT+GGG | - | chr4.2:11692641-11692660 | MS.gene57344:CDS | 50.0% | |
| AGCGAGAGCTAAAGGTGGAA+GGG | + | chr4.2:11691269-11691288 | None:intergenic | 50.0% | |
| AGGCAGAGTCGATGGAAATC+GGG | + | chr4.2:11688219-11688238 | None:intergenic | 50.0% | |
| AGTCGATGGAAATCGGGACT+AGG | + | chr4.2:11688213-11688232 | None:intergenic | 50.0% | |
| CAAGTTTCGAGCTCCACCAA+TGG | + | chr4.2:11689525-11689544 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4.2:11692009-11692028 | MS.gene57344:intron | 50.0% | |
| CCGAACACATGTTGGAGGAA+AGG | - | chr4.2:11691750-11691769 | MS.gene57344:intron | 50.0% | |
| CGGGAGATACTGGAGAGTTA+TGG | - | chr4.2:11692586-11692605 | MS.gene57344:CDS | 50.0% | |
| CGTCATCGGAATCGGAGTTA+GGG | + | chr4.2:11688056-11688075 | None:intergenic | 50.0% | |
| CTCCACTACGACATGGAATC+AGG | - | chr4.2:11691287-11691306 | MS.gene57344:intron | 50.0% | |
| CTTGGTTGCTGAGCTTCCAT+TGG | - | chr4.2:11689506-11689525 | MS.gene57344:CDS | 50.0% | |
| GAGGCAGAGTCGATGGAAAT+CGG | + | chr4.2:11688220-11688239 | None:intergenic | 50.0% | |
| GATGCTGAGTCAGACGAAGA+AGG | - | chr4.2:11688444-11688463 | MS.gene57344:intron | 50.0% | |
| GCAGCAGCACTAAGAGAAAG+TGG | + | chr4.2:11691229-11691248 | None:intergenic | 50.0% | |
| GCCAAGAGTTCTTGTCCGTA+TGG | + | chr4.2:11692508-11692527 | None:intergenic | 50.0% | |
| GCGGCATCGTTGAGATTTGA+AGG | + | chr4.2:11687998-11688017 | None:intergenic | 50.0% | |
| GGAGCTCGAAACTTGTGTGA+AGG | - | chr4.2:11689530-11689549 | MS.gene57344:CDS | 50.0% | |
| GGAGGTGGAGACTTTACGAA+TGG | + | chr4.2:11688136-11688155 | None:intergenic | 50.0% | |
| GGGGAACTCGTGTAGAACTT+TGG | - | chr4.2:11692662-11692681 | MS.gene57344:CDS | 50.0% | |
| GGTGGAGACTTTACGAATGG+CGG | + | chr4.2:11688133-11688152 | None:intergenic | 50.0% | |
| GTACCCCACTTAGTGGGATA+AGG | - | chr4.2:11692004-11692023 | MS.gene57344:intron | 50.0% | |
| GTTGAGGATATCTTGGCGCT+AGG | - | chr4.2:11690566-11690585 | MS.gene57344:intron | 50.0% | |
| TCGTCATCGGAATCGGAGTT+AGG | + | chr4.2:11688057-11688076 | None:intergenic | 50.0% | |
| TCGTGCGCATTATATCACCC+CGG | - | chr4.2:11692614-11692633 | MS.gene57344:CDS | 50.0% | |
| TCTTCGGATCAAGGATGAGC+CGG | - | chr4.2:11689650-11689669 | MS.gene57344:intron | 50.0% | |
| TGAGCAACACACCTGCAGTT+CGG | + | chr4.2:11688535-11688554 | None:intergenic | 50.0% | |
| TTGAAAGTGGACCACGGATC+TGG | + | chr4.2:11690290-11690309 | None:intergenic | 50.0% | |
| ! | AAGTGGAGCATCTTTGGTCC+GGG | + | chr4.2:11692635-11692654 | None:intergenic | 50.0% |
| ! | AGCTCCAAGTGGAGCATCTT+TGG | + | chr4.2:11692641-11692660 | None:intergenic | 50.0% |
| ! | CAAGTGGAGCATCTTTGGTC+CGG | + | chr4.2:11692636-11692655 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4.2:11692012-11692031 | None:intergenic | 50.0% |
| ! | GGAGTTAGGGTTAGCGTTGA+TGG | + | chr4.2:11688043-11688062 | None:intergenic | 50.0% |
| ! | GTGGGATAAGGCTTGGTTGT+TGG | - | chr4.2:11692055-11692074 | MS.gene57344:intron | 50.0% |
| ! | TGATGGATCAACTGGAGCTG+CGG | - | chr4.2:11688397-11688416 | MS.gene57344:intron | 50.0% |
| !! | GAAGGGGCATCTCTATATCC+TGG | + | chr4.2:11691252-11691271 | None:intergenic | 50.0% |
| !! | TGAGGGTGGTGGAATTGTTC+CGG | + | chr4.2:11688083-11688102 | None:intergenic | 50.0% |
| AATGGAGGGAGTAGTCCCTC+TGG | - | chr4.2:11689189-11689208 | MS.gene57344:intron | 55.0% | |
| AGATGCTCCACTTGGAGCTG+GGG | - | chr4.2:11692642-11692661 | MS.gene57344:CDS | 55.0% | |
| AGTCGCTGAGTGAACTCGAC+GGG | + | chr4.2:11688159-11688178 | None:intergenic | 55.0% | |
| AGTGGAGCGAGAGCTAAAGG+TGG | + | chr4.2:11691274-11691293 | None:intergenic | 55.0% | |
| CACCTGCAGTTCGGAAAGTG+CGG | + | chr4.2:11688526-11688545 | None:intergenic | 55.0% | |
| CAGGTGTACGTTAGACCTGC+AGG | - | chr4.2:11688366-11688385 | MS.gene57344:intron | 55.0% | |
| CCGATTCCGATGACGATCAC+CGG | - | chr4.2:11688061-11688080 | MS.gene57344:CDS | 55.0% | |
| CCGGTGATCGTCATCGGAAT+CGG | + | chr4.2:11688064-11688083 | None:intergenic | 55.0% | |
| CGGACCAAAGATGCTCCACT+TGG | - | chr4.2:11692634-11692653 | MS.gene57344:CDS | 55.0% | |
| CTGACTCAGCATCTCCTCCA+GGG | + | chr4.2:11688437-11688456 | None:intergenic | 55.0% | |
| GACTATTGCCCGGGAGATAC+TGG | - | chr4.2:11692576-11692595 | MS.gene57344:CDS | 55.0% | |
| GAGCGAGAGCTAAAGGTGGA+AGG | + | chr4.2:11691270-11691289 | None:intergenic | 55.0% | |
| GAGTCGCTGAGTGAACTCGA+CGG | + | chr4.2:11688160-11688179 | None:intergenic | 55.0% | |
| GCGAGAGCTAAAGGTGGAAG+GGG | + | chr4.2:11691268-11691287 | None:intergenic | 55.0% | |
| GGAGACTTTACGAATGGCGG+AGG | + | chr4.2:11688130-11688149 | None:intergenic | 55.0% | |
| GGTTGCTGAGCTTCCATTGG+TGG | - | chr4.2:11689509-11689528 | MS.gene57344:CDS | 55.0% | |
| GTGTCTACTTCTGCACCAGC+TGG | - | chr4.2:11691781-11691800 | MS.gene57344:intron | 55.0% | |
| GTTGTTGGAGGCAGAGTCGA+TGG | + | chr4.2:11688227-11688246 | None:intergenic | 55.0% | |
| TCTACTTCTGCACCAGCTGG+TGG | - | chr4.2:11691784-11691803 | MS.gene57344:intron | 55.0% | |
| TCTGACTCAGCATCTCCTCC+AGG | + | chr4.2:11688438-11688457 | None:intergenic | 55.0% | |
| TTGCTGGGCTGACTATTGCC+CGG | - | chr4.2:11692566-11692585 | MS.gene57344:CDS | 55.0% | |
| ! | AGTGGAGCATCTTTGGTCCG+GGG | + | chr4.2:11692634-11692653 | None:intergenic | 55.0% |
| ! | CAGTTCGGAAAGTGCGGTCT+CGG | + | chr4.2:11688520-11688539 | None:intergenic | 55.0% |
| ! | CGTAGTGGAGCGAGAGCTAA+AGG | + | chr4.2:11691277-11691296 | None:intergenic | 55.0% |
| ! | TTCTCTTAGTGCTGCTGCCC+AGG | - | chr4.2:11691231-11691250 | MS.gene57344:intron | 55.0% |
| AGAAGAACCTGCTCTGCGCC+AGG | - | chr4.2:11691696-11691715 | MS.gene57344:intron | 60.0% | |
| AGGGTTGCAGTGTACCCTGG+AGG | - | chr4.2:11688420-11688439 | MS.gene57344:intron | 60.0% | |
| CGGATCAAGGATGAGCCGGT+TGG | - | chr4.2:11689654-11689673 | MS.gene57344:intron | 60.0% | |
| GACCGCACTTTCCGAACTGC+AGG | - | chr4.2:11688521-11688540 | MS.gene57344:intron | 60.0% | |
| GATGCTCCACTTGGAGCTGG+GGG | - | chr4.2:11692643-11692662 | MS.gene57344:CDS | 60.0% | |
| GCTCTCGCTCCACTACGACA+TGG | - | chr4.2:11691280-11691299 | MS.gene57344:intron | 60.0% | |
| GGATCAACTGGAGCTGCGGA+GGG | - | chr4.2:11688401-11688420 | MS.gene57344:intron | 60.0% | |
| GGCTGGGTACCCCACTTAGT+GGG | - | chr4.2:11691998-11692017 | MS.gene57344:intron | 60.0% | |
| GGTCTCGGCAGATCGCAATC+CGG | + | chr4.2:11688505-11688524 | None:intergenic | 60.0% | |
| GTCGCTGAGTGAACTCGACG+GGG | + | chr4.2:11688158-11688177 | None:intergenic | 60.0% | |
| TCGCTGAGTGAACTCGACGG+GGG | + | chr4.2:11688157-11688176 | None:intergenic | 60.0% | |
| TCGGCAGATCGCAATCCGGA+GGG | + | chr4.2:11688501-11688520 | None:intergenic | 60.0% | |
| TGCTGGGCTGACTATTGCCC+GGG | - | chr4.2:11692567-11692586 | MS.gene57344:CDS | 60.0% | |
| TGGATCAACTGGAGCTGCGG+AGG | - | chr4.2:11688400-11688419 | MS.gene57344:intron | 60.0% | |
| ! | TAAGTGGGGTACCCAGCCCA+TGG | + | chr4.2:11691996-11692015 | None:intergenic | 60.0% |
| AGTGAACTCGACGGGGGAGG+TGG | + | chr4.2:11688151-11688170 | None:intergenic | 65.0% | |
| CGAGTTCCCCCAGCTCCAAG+TGG | + | chr4.2:11692652-11692671 | None:intergenic | 65.0% | |
| CGGAGGGTTGCAGTGTACCC+TGG | - | chr4.2:11688417-11688436 | MS.gene57344:intron | 65.0% | |
| CTCGGCAGATCGCAATCCGG+AGG | + | chr4.2:11688502-11688521 | None:intergenic | 65.0% | |
| CTGAAAGCCTGGCGCAGAGC+AGG | + | chr4.2:11691706-11691725 | None:intergenic | 65.0% | |
| CTGAGTGAACTCGACGGGGG+AGG | + | chr4.2:11688154-11688173 | None:intergenic | 65.0% | |
| GGGCTGGGTACCCCACTTAG+TGG | - | chr4.2:11691997-11692016 | MS.gene57344:intron | 65.0% | |
| !! | AGTACGAGGGTGCCACCAGC+TGG | + | chr4.2:11691799-11691818 | None:intergenic | 65.0% |
| GAGTGCGCGGGTGGAGGAGA+GGG | + | chr4.2:11688106-11688125 | None:intergenic | 70.0% | |
| GCGGGTGGAGGAGAGGGTGA+GGG | + | chr4.2:11688100-11688119 | None:intergenic | 70.0% | |
| GGAGGAGAGGGTGAGGGTGG+TGG | + | chr4.2:11688094-11688113 | None:intergenic | 70.0% | |
| GGTGGAGGAGAGGGTGAGGG+TGG | + | chr4.2:11688097-11688116 | None:intergenic | 70.0% | |
| ! | AATGGCGGAGGCGAGTGCGC+GGG | + | chr4.2:11688118-11688137 | None:intergenic | 70.0% |
| ! | GAATGGCGGAGGCGAGTGCG+CGG | + | chr4.2:11688119-11688138 | None:intergenic | 70.0% |
| CGAGTGCGCGGGTGGAGGAG+AGG | + | chr4.2:11688107-11688126 | None:intergenic | 75.0% | |
| CGCGGGTGGAGGAGAGGGTG+AGG | + | chr4.2:11688101-11688120 | None:intergenic | 75.0% | |
| ! | GGAGGCGAGTGCGCGGGTGG+AGG | + | chr4.2:11688112-11688131 | None:intergenic | 80.0% |
| ! | GGCGGAGGCGAGTGCGCGGG+TGG | + | chr4.2:11688115-11688134 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 11687958 | 11692717 | 11687958 | ID=MS.gene57344 |
| chr4.2 | mRNA | 11687958 | 11692717 | 11687958 | ID=MS.gene57344.t1;Parent=MS.gene57344 |
| chr4.2 | exon | 11692388 | 11692717 | 11692388 | ID=MS.gene57344.t1.exon1;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11692388 | 11692717 | 11692388 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| chr4.2 | exon | 11692133 | 11692306 | 11692133 | ID=MS.gene57344.t1.exon2;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11692133 | 11692306 | 11692133 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| chr4.2 | exon | 11690917 | 11691237 | 11690917 | ID=MS.gene57344.t1.exon3;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11690917 | 11691237 | 11690917 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| chr4.2 | exon | 11690466 | 11690531 | 11690466 | ID=MS.gene57344.t1.exon4;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11690466 | 11690531 | 11690466 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| chr4.2 | exon | 11690316 | 11690384 | 11690316 | ID=MS.gene57344.t1.exon5;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11690316 | 11690384 | 11690316 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| chr4.2 | exon | 11690032 | 11690124 | 11690032 | ID=MS.gene57344.t1.exon6;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11690032 | 11690124 | 11690032 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| chr4.2 | exon | 11689367 | 11689590 | 11689367 | ID=MS.gene57344.t1.exon7;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11689367 | 11689590 | 11689367 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| chr4.2 | exon | 11688823 | 11689096 | 11688823 | ID=MS.gene57344.t1.exon8;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11688823 | 11689096 | 11688823 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| chr4.2 | exon | 11687958 | 11688191 | 11687958 | ID=MS.gene57344.t1.exon9;Parent=MS.gene57344.t1 |
| chr4.2 | CDS | 11687958 | 11688191 | 11687958 | ID=cds.MS.gene57344.t1;Parent=MS.gene57344.t1 |
| Gene Sequence |
| Protein sequence |