Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52976.t1 | XP_003590829.1 | 97.5 | 276 | 7 | 0 | 1 | 276 | 1 | 276 | 5.90E-148 | 533.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52976.t1 | Q9LW57 | 58.1 | 267 | 106 | 1 | 10 | 276 | 24 | 284 | 2.1e-85 | 317.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52976.t1 | G7I4U4 | 97.5 | 276 | 7 | 0 | 1 | 276 | 1 | 276 | 4.2e-148 | 533.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene52976 | 0.893507 | 5.90E-75 | -1.69E-46 |
| MS.gene049217 | MS.gene52976 | 0.811129 | 8.17E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene52976 | 0.864039 | 1.62E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene52976 | 0.865617 | 5.19E-65 | -1.69E-46 |
| MS.gene049285 | MS.gene52976 | 0.880541 | 5.04E-70 | -1.69E-46 |
| MS.gene049320 | MS.gene52976 | 0.881071 | 3.25E-70 | -1.69E-46 |
| MS.gene04939 | MS.gene52976 | 0.805209 | 1.49E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene52976 | 0.849137 | 3.92E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene52976 | 0.896905 | 2.35E-76 | -1.69E-46 |
| MS.gene049657 | MS.gene52976 | 0.806102 | 9.68E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene52976 | 0.831999 | 1.21E-55 | -1.69E-46 |
| MS.gene050082 | MS.gene52976 | -0.805569 | 1.25E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene52976 | 0.872471 | 3.10E-67 | -1.69E-46 |
| MS.gene050163 | MS.gene52976 | 0.823646 | 1.24E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene52976 | 0.834208 | 3.42E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene52976 | 0.94202 | 1.50E-101 | -1.69E-46 |
| MS.gene050216 | MS.gene52976 | 0.806626 | 7.51E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene52976 | 0.921041 | 5.94E-88 | -1.69E-46 |
| MS.gene050333 | MS.gene52976 | 0.815942 | 7.14E-52 | -1.69E-46 |
| MS.gene050338 | MS.gene52976 | -0.831251 | 1.86E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene52976 | 0.822016 | 2.97E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene52976 | 0.907986 | 2.80E-81 | -1.69E-46 |
| MS.gene050502 | MS.gene52976 | 0.814362 | 1.60E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene52976 | 0.881312 | 2.66E-70 | -1.69E-46 |
| MS.gene050518 | MS.gene52976 | 0.872048 | 4.29E-67 | -1.69E-46 |
| MS.gene050538 | MS.gene52976 | 0.801366 | 9.31E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene52976 | 0.888849 | 4.10E-73 | -1.69E-46 |
| MS.gene050612 | MS.gene52976 | 0.889316 | 2.70E-73 | -1.69E-46 |
| MS.gene050675 | MS.gene52976 | 0.868486 | 6.30E-66 | -1.69E-46 |
| MS.gene050697 | MS.gene52976 | 0.859115 | 5.17E-63 | -1.69E-46 |
| MS.gene050699 | MS.gene52976 | 0.879643 | 1.05E-69 | -1.69E-46 |
| MS.gene050747 | MS.gene52976 | 0.833219 | 6.05E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene52976 | 0.863268 | 2.81E-64 | -1.69E-46 |
| MS.gene05080 | MS.gene52976 | 0.874299 | 7.53E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene52976 | 0.839399 | 1.62E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene52976 | 0.885685 | 6.57E-72 | -1.69E-46 |
| MS.gene050871 | MS.gene52976 | 0.882299 | 1.17E-70 | -1.69E-46 |
| MS.gene050876 | MS.gene52976 | 0.824453 | 8.01E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene52976 | 0.886593 | 2.99E-72 | -1.69E-46 |
| MS.gene050950 | MS.gene52976 | 0.835922 | 1.27E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene52976 | 0.875213 | 3.68E-68 | -1.69E-46 |
| MS.gene051268 | MS.gene52976 | 0.859185 | 4.93E-63 | -1.69E-46 |
| MS.gene051317 | MS.gene52976 | 0.908378 | 1.82E-81 | -1.69E-46 |
| MS.gene051551 | MS.gene52976 | 0.850385 | 1.76E-60 | -1.69E-46 |
| MS.gene051651 | MS.gene52976 | -0.853492 | 2.31E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene52976 | 0.821757 | 3.41E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene52976 | 0.873694 | 1.21E-67 | -1.69E-46 |
| MS.gene051874 | MS.gene52976 | 0.806909 | 6.54E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene52976 | 0.819371 | 1.20E-52 | -1.69E-46 |
| MS.gene052066 | MS.gene52976 | 0.82121 | 4.56E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene52976 | 0.844519 | 7.19E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene52976 | 0.879236 | 1.47E-69 | -1.69E-46 |
| MS.gene052486 | MS.gene52976 | 0.878619 | 2.43E-69 | -1.69E-46 |
| MS.gene052494 | MS.gene52976 | -0.816404 | 5.63E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene52976 | 0.87214 | 4.00E-67 | -1.69E-46 |
| MS.gene052504 | MS.gene52976 | 0.840515 | 8.30E-58 | -1.69E-46 |
| MS.gene052506 | MS.gene52976 | 0.868633 | 5.65E-66 | -1.69E-46 |
| MS.gene052615 | MS.gene52976 | 0.830061 | 3.63E-55 | -1.69E-46 |
| MS.gene052820 | MS.gene52976 | 0.802301 | 5.99E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene52976 | 0.881548 | 2.19E-70 | -1.69E-46 |
| MS.gene052823 | MS.gene52976 | 0.87218 | 3.88E-67 | -1.69E-46 |
| MS.gene052825 | MS.gene52976 | 0.870042 | 1.97E-66 | -1.69E-46 |
| MS.gene052870 | MS.gene52976 | 0.815465 | 9.12E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene52976 | 0.833972 | 3.92E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene52976 | 0.847543 | 1.08E-59 | -1.69E-46 |
| MS.gene052986 | MS.gene52976 | 0.831488 | 1.62E-55 | -1.69E-46 |
| MS.gene052987 | MS.gene52976 | 0.836054 | 1.17E-56 | -1.69E-46 |
| MS.gene053117 | MS.gene52976 | 0.838746 | 2.39E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene52976 | 0.868559 | 5.97E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene52976 | 0.839332 | 1.69E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene52976 | 0.841192 | 5.51E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene52976 | -0.818678 | 1.73E-52 | -1.69E-46 |
| MS.gene053421 | MS.gene52976 | -0.814691 | 1.35E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene52976 | 0.823733 | 1.18E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene52976 | 0.876837 | 1.02E-68 | -1.69E-46 |
| MS.gene053480 | MS.gene52976 | 0.882296 | 1.17E-70 | -1.69E-46 |
| MS.gene053574 | MS.gene52976 | 0.858607 | 7.33E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene52976 | 0.83097 | 2.18E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene52976 | 0.818118 | 2.32E-52 | -1.69E-46 |
| MS.gene053633 | MS.gene52976 | 0.855974 | 4.40E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene52976 | 0.883575 | 3.99E-71 | -1.69E-46 |
| MS.gene053916 | MS.gene52976 | 0.824216 | 9.10E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene52976 | 0.808302 | 3.31E-50 | -1.69E-46 |
| MS.gene054270 | MS.gene52976 | -0.804353 | 2.25E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene52976 | 0.842857 | 2.00E-58 | -1.69E-46 |
| MS.gene054408 | MS.gene52976 | 0.819645 | 1.04E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene52976 | 0.857423 | 1.65E-62 | -1.69E-46 |
| MS.gene054600 | MS.gene52976 | 0.827073 | 1.91E-54 | -1.69E-46 |
| MS.gene054614 | MS.gene52976 | -0.805109 | 1.56E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene52976 | 0.841854 | 3.69E-58 | -1.69E-46 |
| MS.gene054706 | MS.gene52976 | -0.840961 | 6.34E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene52976 | 0.898799 | 3.72E-77 | -1.69E-46 |
| MS.gene054851 | MS.gene52976 | -0.827475 | 1.53E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene52976 | -0.80268 | 5.00E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene52976 | 0.821536 | 3.83E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene52976 | 0.902182 | 1.26E-78 | -1.69E-46 |
| MS.gene054999 | MS.gene52976 | -0.809644 | 1.71E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene52976 | 0.820134 | 8.05E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene52976 | 0.841795 | 3.83E-58 | -1.69E-46 |
| MS.gene055251 | MS.gene52976 | -0.857616 | 1.45E-62 | -1.69E-46 |
| MS.gene055362 | MS.gene52976 | 0.870091 | 1.90E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene52976 | 0.884874 | 1.32E-71 | -1.69E-46 |
| MS.gene055577 | MS.gene52976 | 0.862395 | 5.22E-64 | -1.69E-46 |
| MS.gene055748 | MS.gene52976 | 0.882489 | 9.98E-71 | -1.69E-46 |
| MS.gene055750 | MS.gene52976 | 0.87531 | 3.41E-68 | -1.69E-46 |
| MS.gene055751 | MS.gene52976 | 0.890047 | 1.40E-73 | -1.69E-46 |
| MS.gene055776 | MS.gene52976 | 0.878089 | 3.72E-69 | -1.69E-46 |
| MS.gene055849 | MS.gene52976 | 0.829345 | 5.42E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene52976 | 0.925183 | 2.59E-90 | -1.69E-46 |
| MS.gene055941 | MS.gene52976 | 0.832771 | 7.82E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene52976 | -0.809402 | 1.93E-50 | -1.69E-46 |
| MS.gene056046 | MS.gene52976 | 0.872395 | 3.29E-67 | -1.69E-46 |
| MS.gene056166 | MS.gene52976 | 0.808614 | 2.84E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene52976 | -0.807937 | 3.96E-50 | -1.69E-46 |
| MS.gene056200 | MS.gene52976 | -0.805431 | 1.34E-49 | -1.69E-46 |
| MS.gene056266 | MS.gene52976 | 0.833933 | 4.01E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene52976 | 0.89199 | 2.40E-74 | -1.69E-46 |
| MS.gene056446 | MS.gene52976 | 0.824701 | 7.00E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene52976 | 0.802168 | 6.38E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene52976 | 0.929122 | 1.09E-92 | -1.69E-46 |
| MS.gene056510 | MS.gene52976 | 0.887005 | 2.09E-72 | -1.69E-46 |
| MS.gene056583 | MS.gene52976 | -0.805617 | 1.22E-49 | -1.69E-46 |
| MS.gene056618 | MS.gene52976 | -0.867947 | 9.39E-66 | -1.69E-46 |
| MS.gene056657 | MS.gene52976 | 0.874609 | 5.91E-68 | -1.69E-46 |
| MS.gene056692 | MS.gene52976 | 0.856539 | 3.00E-62 | -1.69E-46 |
| MS.gene056694 | MS.gene52976 | -0.817825 | 2.70E-52 | -1.69E-46 |
| MS.gene056878 | MS.gene52976 | 0.800491 | 1.41E-48 | -1.69E-46 |
| MS.gene056898 | MS.gene52976 | 0.841613 | 4.27E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene52976 | 0.849937 | 2.35E-60 | -1.69E-46 |
| MS.gene057086 | MS.gene52976 | 0.823387 | 1.42E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene52976 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene52976 | 0.832549 | 8.87E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene52976 | 0.855637 | 5.52E-62 | -1.69E-46 |
| MS.gene057857 | MS.gene52976 | 0.817865 | 2.64E-52 | -1.69E-46 |
| MS.gene057872 | MS.gene52976 | 0.817536 | 3.13E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene52976 | 0.847577 | 1.06E-59 | -1.69E-46 |
| MS.gene058130 | MS.gene52976 | 0.800867 | 1.18E-48 | -1.69E-46 |
| MS.gene058157 | MS.gene52976 | 0.82752 | 1.50E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene52976 | -0.876911 | 9.58E-69 | -1.69E-46 |
| MS.gene058335 | MS.gene52976 | 0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene058338 | MS.gene52976 | 0.850632 | 1.50E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene52976 | 0.863938 | 1.74E-64 | -1.69E-46 |
| MS.gene058382 | MS.gene52976 | -0.862402 | 5.20E-64 | -1.69E-46 |
| MS.gene058419 | MS.gene52976 | 0.887612 | 1.22E-72 | -1.69E-46 |
| MS.gene058544 | MS.gene52976 | 0.859305 | 4.54E-63 | -1.69E-46 |
| MS.gene058719 | MS.gene52976 | 0.815047 | 1.13E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene52976 | 0.817857 | 2.65E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene52976 | 0.847873 | 8.78E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene52976 | 0.871291 | 7.64E-67 | -1.69E-46 |
| MS.gene059022 | MS.gene52976 | 0.878019 | 3.94E-69 | -1.69E-46 |
| MS.gene059023 | MS.gene52976 | 0.893018 | 9.29E-75 | -1.69E-46 |
| MS.gene05912 | MS.gene52976 | 0.802352 | 5.84E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene52976 | 0.830229 | 3.30E-55 | -1.69E-46 |
| MS.gene05914 | MS.gene52976 | 0.819201 | 1.32E-52 | -1.69E-46 |
| MS.gene05926 | MS.gene52976 | -0.826261 | 2.99E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene52976 | 0.801443 | 8.98E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene52976 | 0.882155 | 1.32E-70 | -1.69E-46 |
| MS.gene059677 | MS.gene52976 | 0.888286 | 6.75E-73 | -1.69E-46 |
| MS.gene059699 | MS.gene52976 | -0.809731 | 1.64E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene52976 | -0.826379 | 2.80E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene52976 | 0.850208 | 1.97E-60 | -1.69E-46 |
| MS.gene059756 | MS.gene52976 | 0.850879 | 1.28E-60 | -1.69E-46 |
| MS.gene059837 | MS.gene52976 | 0.875451 | 3.05E-68 | -1.69E-46 |
| MS.gene059865 | MS.gene52976 | 0.912366 | 2.12E-83 | -1.69E-46 |
| MS.gene05995 | MS.gene52976 | 0.817584 | 3.06E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene52976 | 0.822941 | 1.81E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene52976 | 0.893804 | 4.47E-75 | -1.69E-46 |
| MS.gene06027 | MS.gene52976 | 0.835281 | 1.84E-56 | -1.69E-46 |
| MS.gene06042 | MS.gene52976 | -0.825404 | 4.78E-54 | -1.69E-46 |
| MS.gene060526 | MS.gene52976 | 0.802091 | 6.61E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene52976 | -0.807304 | 5.40E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene52976 | -0.844019 | 9.79E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene52976 | 0.8539 | 1.76E-61 | -1.69E-46 |
| MS.gene060762 | MS.gene52976 | 0.88046 | 5.39E-70 | -1.69E-46 |
| MS.gene060778 | MS.gene52976 | 0.886894 | 2.30E-72 | -1.69E-46 |
| MS.gene06077 | MS.gene52976 | 0.89007 | 1.37E-73 | -1.69E-46 |
| MS.gene060823 | MS.gene52976 | -0.831159 | 1.95E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene52976 | 0.81175 | 5.99E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene52976 | 0.822771 | 1.98E-53 | -1.69E-46 |
| MS.gene06097 | MS.gene52976 | 0.826985 | 2.01E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene52976 | 0.930192 | 2.34E-93 | -1.69E-46 |
| MS.gene061044 | MS.gene52976 | -0.863044 | 3.30E-64 | -1.69E-46 |
| MS.gene061150 | MS.gene52976 | 0.823306 | 1.49E-53 | -1.69E-46 |
| MS.gene061218 | MS.gene52976 | 0.818871 | 1.56E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52976.t1 | MTR_1g075660 | 97.464 | 276 | 7 | 0 | 1 | 276 | 1 | 276 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52976.t1 | AT3G23400 | 74.468 | 188 | 48 | 0 | 89 | 276 | 97 | 284 | 5.63e-104 | 304 |
| MS.gene52976.t1 | AT3G23400 | 77.119 | 118 | 27 | 0 | 89 | 206 | 97 | 214 | 1.52e-63 | 199 |
| MS.gene52976.t1 | AT3G23400 | 47.436 | 156 | 76 | 1 | 10 | 165 | 24 | 173 | 1.60e-34 | 124 |
| MS.gene52976.t1 | AT3G23400 | 47.436 | 156 | 76 | 1 | 10 | 165 | 24 | 173 | 1.60e-34 | 124 |
Find 86 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCTTGAAGTTCAATCTTC+TGG | 0.182887 | 1.1:+56632369 | MS.gene52976:CDS |
| CAGCAGCAGCTTTCACAATA+AGG | 0.227641 | 1.1:-56632285 | None:intergenic |
| CTTGTTCTTGTTTCTTTCCT+AGG | 0.270299 | 1.1:+56632209 | MS.gene52976:CDS |
| CAGACCTGTCCAAGAGTTAT+AGG | 0.304929 | 1.1:-56633494 | None:intergenic |
| ATGCTGCAGAGTGCTGTTGC+TGG | 0.321754 | 1.1:+56633266 | MS.gene52976:intron |
| TCAAAAGGATTAGAAGGAAT+TGG | 0.350636 | 1.1:-56632337 | None:intergenic |
| GGCTTAATATGTTTACCCTT+TGG | 0.357584 | 1.1:-56632256 | None:intergenic |
| GTAGAATCAAAAGGATTAGA+AGG | 0.359007 | 1.1:-56632343 | None:intergenic |
| AAGAAGTAGAAAATGGTAGT+AGG | 0.359127 | 1.1:-56632189 | None:intergenic |
| CAAGAACAAGAAGTAGAAAA+TGG | 0.362005 | 1.1:-56632196 | None:intergenic |
| AGCAGCAGCTTTCACAATAA+GGG | 0.381281 | 1.1:-56632284 | None:intergenic |
| GAGAAGTTGAGGGGTGAAGA+AGG | 0.382924 | 1.1:-56632156 | None:intergenic |
| ATCTTCCTTGCAACTTATCA+AGG | 0.390696 | 1.1:-56633391 | None:intergenic |
| CTAATGTGGCAGTTACTTCA+AGG | 0.421507 | 1.1:-56633807 | None:intergenic |
| AGAAGTAGAAAATGGTAGTA+GGG | 0.421680 | 1.1:-56632188 | None:intergenic |
| AGCCTTCCTGTGGGAGGTCC+AGG | 0.424885 | 1.1:-56633467 | None:intergenic |
| CTCAATGCATCTGGAATTTG+AGG | 0.437203 | 1.1:-56634077 | None:intergenic |
| AAAACCACAGTGAAGACAAC+CGG | 0.437328 | 1.1:+56634023 | MS.gene52976:CDS |
| ACTCTAGGTGGGAGCCGTCC+TGG | 0.438721 | 1.1:+56633449 | MS.gene52976:CDS |
| AGGGGTGAAGAAGGAGATTG+AGG | 0.439438 | 1.1:-56632147 | None:intergenic |
| TGCTGCAGAGTGCTGTTGCT+GGG | 0.444702 | 1.1:+56633267 | MS.gene52976:intron |
| GATTGTGGCCTCAATGCATC+TGG | 0.448068 | 1.1:-56634086 | None:intergenic |
| AGGCTCCTTCCTATAACTCT+TGG | 0.456747 | 1.1:+56633485 | MS.gene52976:CDS |
| ACCTTCAGTTGGGTGCTCCA+TGG | 0.457796 | 1.1:+56633773 | MS.gene52976:CDS |
| GAGGAGATAGAGGCGAGCTA+AGG | 0.461380 | 1.1:+56634168 | MS.gene52976:CDS |
| ATCAATGTTCTTACTCCAAA+GGG | 0.463819 | 1.1:+56632241 | MS.gene52976:CDS |
| CTCTATCTCCTCTGGTGACG+CGG | 0.465853 | 1.1:-56634157 | None:intergenic |
| CTCAAATTTGTGAGCTAATG+TGG | 0.469198 | 1.1:-56633821 | None:intergenic |
| GGGTGAGAGAGAGAAGTTGA+GGG | 0.469372 | 1.1:-56632166 | None:intergenic |
| AAAGGCAGATGCTGCGGCTA+AGG | 0.475842 | 1.1:+56633328 | MS.gene52976:CDS |
| GGGGTGAAGAAGGAGATTGA+GGG | 0.481429 | 1.1:-56632146 | None:intergenic |
| GAAGCTGATATTTCAATCTC+TGG | 0.485146 | 1.1:+56632307 | MS.gene52976:CDS |
| TTGATAAGTTGCAAGGAAGA+TGG | 0.492943 | 1.1:+56633393 | MS.gene52976:CDS |
| CTCAAATTCCAGATGCATTG+AGG | 0.496761 | 1.1:+56634078 | MS.gene52976:CDS |
| GTTACTTCAAGGGGCGGTAG+AGG | 0.502869 | 1.1:-56633796 | None:intergenic |
| GCTAAGGAACTTGAAGAAGC+TGG | 0.503259 | 1.1:+56633344 | MS.gene52976:CDS |
| AGGAGATAGAGGCGAGCTAA+GGG | 0.505818 | 1.1:+56634169 | MS.gene52976:CDS |
| GCTTTCACAATAAGGGATGA+AGG | 0.507075 | 1.1:-56632277 | None:intergenic |
| GCGTTCTCCTCTCGTACTCT+AGG | 0.509013 | 1.1:+56633434 | MS.gene52976:CDS |
| ACATTGATGCTGTTGCTCCT+AGG | 0.511152 | 1.1:-56632226 | None:intergenic |
| TAATATAGTGGACCTTCAGT+TGG | 0.514528 | 1.1:+56633762 | MS.gene52976:CDS |
| TCAAGGGGCGGTAGAGGCCA+TGG | 0.516112 | 1.1:-56633790 | None:intergenic |
| GACCAGAAGATTGAACTTCA+AGG | 0.517749 | 1.1:-56632371 | None:intergenic |
| CCACAATCTAATAGAGGAAG+TGG | 0.521959 | 1.1:+56634101 | MS.gene52976:CDS |
| CCTTCCTATAACTCTTGGAC+AGG | 0.529460 | 1.1:+56633490 | MS.gene52976:CDS |
| TAGCTCGCCTCTATCTCCTC+TGG | 0.530340 | 1.1:-56634165 | None:intergenic |
| AATATAGTGGACCTTCAGTT+GGG | 0.531782 | 1.1:+56633763 | MS.gene52976:CDS |
| GGGGTGAGAGAGAGAAGTTG+AGG | 0.537948 | 1.1:-56632167 | None:intergenic |
| CATCAATGTTCTTACTCCAA+AGG | 0.544020 | 1.1:+56632240 | MS.gene52976:CDS |
| ACCAGAAGATTGAACTTCAA+GGG | 0.545837 | 1.1:-56632370 | None:intergenic |
| TTCTCCTCTCGTACTCTAGG+TGG | 0.547834 | 1.1:+56633437 | MS.gene52976:CDS |
| TTGAGGCCACAATCTAATAG+AGG | 0.552114 | 1.1:+56634095 | MS.gene52976:CDS |
| GAAGTAGAAAATGGTAGTAG+GGG | 0.556342 | 1.1:-56632187 | None:intergenic |
| CCACTTCCTCTATTAGATTG+TGG | 0.557605 | 1.1:-56634101 | None:intergenic |
| AGCCGTCCTGGACCTCCCAC+AGG | 0.562196 | 1.1:+56633461 | MS.gene52976:CDS |
| TCTATCTCCTCTGGTGACGC+GGG | 0.563631 | 1.1:-56634156 | None:intergenic |
| TCTCCTCTCGTACTCTAGGT+GGG | 0.571585 | 1.1:+56633438 | MS.gene52976:CDS |
| GCCATGGAGCACCCAACTGA+AGG | 0.577155 | 1.1:-56633774 | None:intergenic |
| GACAACCTTGATAAGTTGCA+AGG | 0.586490 | 1.1:+56633386 | MS.gene52976:CDS |
| AAATGAAGAAGACCTACAAA+AGG | 0.586772 | 1.1:+56633310 | MS.gene52976:CDS |
| TAATGTGGCAGTTACTTCAA+GGG | 0.589545 | 1.1:-56633806 | None:intergenic |
| AAACCACAGTGAAGACAACC+GGG | 0.596707 | 1.1:+56634024 | MS.gene52976:CDS |
| GCTCACAAATTTGAGCTCGT+AGG | 0.603423 | 1.1:+56633829 | MS.gene52976:CDS |
| CGCGTCACCAGAGGAGATAG+AGG | 0.604555 | 1.1:+56634158 | MS.gene52976:CDS |
| GCTGTTGCTGGGCTAAATAG+AGG | 0.605133 | 1.1:+56633278 | MS.gene52976:CDS |
| CCTGTCCAAGAGTTATAGGA+AGG | 0.608009 | 1.1:-56633490 | None:intergenic |
| TATAGGAAGGAGCCTTCCTG+TGG | 0.615801 | 1.1:-56633477 | None:intergenic |
| GTCCTGGACCTCCCACAGGA+AGG | 0.617086 | 1.1:+56633465 | MS.gene52976:CDS |
| CCAGAAGATTGAACTTCAAG+GGG | 0.618887 | 1.1:-56632369 | None:intergenic |
| CCTACAAAAGGCAGATGCTG+CGG | 0.625367 | 1.1:+56633322 | MS.gene52976:CDS |
| TGGCAACTGTGAAAATGTCC+CGG | 0.625500 | 1.1:-56634042 | None:intergenic |
| ACTTATCAAGGTTGTCTGTG+AGG | 0.627193 | 1.1:-56633379 | None:intergenic |
| TTCCTGTGGGAGGTCCAGGA+CGG | 0.631302 | 1.1:-56633463 | None:intergenic |
| AAGTAGAAAATGGTAGTAGG+GGG | 0.633244 | 1.1:-56632186 | None:intergenic |
| GGTGAGAGAGAGAAGTTGAG+GGG | 0.635373 | 1.1:-56632165 | None:intergenic |
| GGAATTTGAGGCAAATCTAG+AGG | 0.640324 | 1.1:-56634065 | None:intergenic |
| AATGTGGCAGTTACTTCAAG+GGG | 0.642001 | 1.1:-56633805 | None:intergenic |
| GGAAGGAGCCTTCCTGTGGG+AGG | 0.648424 | 1.1:-56633473 | None:intergenic |
| GCAGATACCCGCGTCACCAG+AGG | 0.664329 | 1.1:+56634149 | MS.gene52976:CDS |
| GCTCCCACCTAGAGTACGAG+AGG | 0.667203 | 1.1:-56633441 | None:intergenic |
| ATTTGAGGCAAATCTAGAGG+TGG | 0.671293 | 1.1:-56634062 | None:intergenic |
| GTGGCAGTTACTTCAAGGGG+CGG | 0.672835 | 1.1:-56633802 | None:intergenic |
| ATAGGAAGGAGCCTTCCTGT+GGG | 0.683855 | 1.1:-56633476 | None:intergenic |
| AAGGAACTTGAAGAAGCTGG+AGG | 0.698611 | 1.1:+56633347 | MS.gene52976:CDS |
| TGTCCCGGTTGTCTTCACTG+TGG | 0.714687 | 1.1:-56634027 | None:intergenic |
| CAGAAGATTGAACTTCAAGG+GGG | 0.762152 | 1.1:-56632368 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATAGATATAGTAT+AGG | + | chr1.1:56632580-56632599 | MS.gene52976:intron | 10.0% |
| !! | ATAATTGCATAATAAAAATA+GGG | + | chr1.1:56632524-56632543 | MS.gene52976:intron | 10.0% |
| !! | TATAAGTATTTATCATATAA+GGG | + | chr1.1:56632958-56632977 | MS.gene52976:intron | 10.0% |
| !! | TATAATTGCATAATAAAAAT+AGG | + | chr1.1:56632523-56632542 | MS.gene52976:intron | 10.0% |
| !! | AAATATTACATCATTATATC+AGG | - | chr1.1:56633530-56633549 | None:intergenic | 15.0% |
| !! | ATTGTCATTAAAATGTATTT+AGG | + | chr1.1:56632668-56632687 | MS.gene52976:intron | 15.0% |
| !! | GTATAAGTATTTATCATATA+AGG | + | chr1.1:56632957-56632976 | MS.gene52976:intron | 15.0% |
| !! | TAATTGCATAATAAAAATAG+GGG | + | chr1.1:56632525-56632544 | MS.gene52976:intron | 15.0% |
| !!! | TATATATTTTTGTTTTGCAA+AGG | - | chr1.1:56632570-56632589 | None:intergenic | 15.0% |
| !! | ATAAACATATTATTGAACAG+CGG | - | chr1.1:56633669-56633688 | None:intergenic | 20.0% |
| !! | GATTATGTATAAGTTGTAAA+CGG | + | chr1.1:56632980-56632999 | MS.gene52976:intron | 20.0% |
| !! | TGGATAAATAACTTGATTTA+GGG | + | chr1.1:56632698-56632717 | MS.gene52976:intron | 20.0% |
| !!! | AATAAGTTGAAAACAACTTA+TGG | + | chr1.1:56633051-56633070 | MS.gene52976:intron | 20.0% |
| !!! | ACTTAAGTATCTAAGTTTTA+TGG | + | chr1.1:56632627-56632646 | MS.gene52976:intron | 20.0% |
| !!! | ATTATGTTTTAGTCTCATTT+CGG | + | chr1.1:56633615-56633634 | MS.gene52976:intron | 20.0% |
| !!! | CAAAGATTTTGATAATATAG+TGG | + | chr1.1:56633750-56633769 | MS.gene52976:CDS | 20.0% |
| !!! | CTTTTGTTTGACAAATTAAA+TGG | + | chr1.1:56632445-56632464 | MS.gene52976:intron | 20.0% |
| !!! | TAGATTATACGAAAACATTT+TGG | + | chr1.1:56632835-56632854 | MS.gene52976:intron | 20.0% |
| ! | AAAATAGGGGAAATAGTTAT+AGG | + | chr1.1:56632538-56632557 | MS.gene52976:intron | 25.0% |
| ! | AAATCAAGTTATTTATCCAG+AGG | - | chr1.1:56632697-56632716 | None:intergenic | 25.0% |
| ! | AATCAAGTTATTTATCCAGA+GGG | - | chr1.1:56632696-56632715 | None:intergenic | 25.0% |
| ! | CTGGATAAATAACTTGATTT+AGG | + | chr1.1:56632697-56632716 | MS.gene52976:intron | 25.0% |
| !!! | ACTGTTTTGTTTTTGCTATT+AGG | + | chr1.1:56633702-56633721 | MS.gene52976:intron | 25.0% |
| AAATGAAGAAGACCTACAAA+AGG | + | chr1.1:56633310-56633329 | MS.gene52976:CDS | 30.0% | |
| AACTAATATGCACTCAACAT+GGG | - | chr1.1:56632501-56632520 | None:intergenic | 30.0% | |
| AAGAAGTAGAAAATGGTAGT+AGG | - | chr1.1:56632192-56632211 | None:intergenic | 30.0% | |
| AATCCTTATGTAGTTGTGTA+AGG | - | chr1.1:56633152-56633171 | None:intergenic | 30.0% | |
| AGAAGTAGAAAATGGTAGTA+GGG | - | chr1.1:56632191-56632210 | None:intergenic | 30.0% | |
| ATCAAGTTATTTATCCAGAG+GGG | - | chr1.1:56632695-56632714 | None:intergenic | 30.0% | |
| ATCAATGTTCTTACTCCAAA+GGG | + | chr1.1:56632241-56632260 | MS.gene52976:CDS | 30.0% | |
| ATCCTTATGTAGTTGTGTAA+GGG | - | chr1.1:56633151-56633170 | None:intergenic | 30.0% | |
| CAAGAACAAGAAGTAGAAAA+TGG | - | chr1.1:56632199-56632218 | None:intergenic | 30.0% | |
| GTAGAATCAAAAGGATTAGA+AGG | - | chr1.1:56632346-56632365 | None:intergenic | 30.0% | |
| TAACTAATATGCACTCAACA+TGG | - | chr1.1:56632502-56632521 | None:intergenic | 30.0% | |
| TAACTTATGACAAGCTTTCA+AGG | + | chr1.1:56632791-56632810 | MS.gene52976:intron | 30.0% | |
| TCAAAAGGATTAGAAGGAAT+TGG | - | chr1.1:56632340-56632359 | None:intergenic | 30.0% | |
| TTACTGTATCAGAGAGTTTA+TGG | - | chr1.1:56633095-56633114 | None:intergenic | 30.0% | |
| TTGTTCATAACTATCTTTCC+TGG | + | chr1.1:56633557-56633576 | MS.gene52976:intron | 30.0% | |
| ! | AACTTGATTTAGGGTTTGTT+TGG | + | chr1.1:56632707-56632726 | MS.gene52976:intron | 30.0% |
| ! | AATCACTTGCTACACTATTT+GGG | + | chr1.1:56632767-56632786 | MS.gene52976:intron | 30.0% |
| ! | ACACAACTACATAAGGATTT+TGG | + | chr1.1:56633153-56633172 | MS.gene52976:intron | 30.0% |
| ! | ATATTATTGAACAGCGGTTT+TGG | - | chr1.1:56633663-56633682 | None:intergenic | 30.0% |
| ! | TAATCACTTGCTACACTATT+TGG | + | chr1.1:56632766-56632785 | MS.gene52976:intron | 30.0% |
| ! | TTTAGGGTTTGTTTGGAATT+TGG | + | chr1.1:56632714-56632733 | MS.gene52976:intron | 30.0% |
| !! | ACTACATAAGGATTTTGGAA+TGG | + | chr1.1:56633158-56633177 | MS.gene52976:intron | 30.0% |
| AACCCTTACACAACTACATA+AGG | + | chr1.1:56633146-56633165 | MS.gene52976:intron | 35.0% | |
| AAGTAGAAAATGGTAGTAGG+GGG | - | chr1.1:56632189-56632208 | None:intergenic | 35.0% | |
| ACCAGAAGATTGAACTTCAA+GGG | - | chr1.1:56632373-56632392 | None:intergenic | 35.0% | |
| ACTGCTTTCATAAGCTATCT+CGG | + | chr1.1:56633016-56633035 | MS.gene52976:intron | 35.0% | |
| ACTTGTTTGAGCTTATCTAC+TGG | + | chr1.1:56632741-56632760 | MS.gene52976:intron | 35.0% | |
| ATAAGTTGTAAACGGTCTCA+CGG | + | chr1.1:56632988-56633007 | MS.gene52976:intron | 35.0% | |
| ATCTTCCTTGCAACTTATCA+AGG | - | chr1.1:56633394-56633413 | None:intergenic | 35.0% | |
| CAACTTATGGACATGTCATA+AGG | + | chr1.1:56633064-56633083 | MS.gene52976:intron | 35.0% | |
| CAAGGATAGCTTATGAAAAC+AGG | + | chr1.1:56632809-56632828 | MS.gene52976:intron | 35.0% | |
| CATCAATGTTCTTACTCCAA+AGG | + | chr1.1:56632240-56632259 | MS.gene52976:CDS | 35.0% | |
| CTCAAATTTGTGAGCTAATG+TGG | - | chr1.1:56633824-56633843 | None:intergenic | 35.0% | |
| GAAGCTGATATTTCAATCTC+TGG | + | chr1.1:56632307-56632326 | MS.gene52976:CDS | 35.0% | |
| GAAGTAGAAAATGGTAGTAG+GGG | - | chr1.1:56632190-56632209 | None:intergenic | 35.0% | |
| GGCTTAATATGTTTACCCTT+TGG | - | chr1.1:56632259-56632278 | None:intergenic | 35.0% | |
| TAATGTGGCAGTTACTTCAA+GGG | - | chr1.1:56633809-56633828 | None:intergenic | 35.0% | |
| TCAAGTTATTTATCCAGAGG+GGG | - | chr1.1:56632694-56632713 | None:intergenic | 35.0% | |
| TGCTTTCTACTGCATATACA+TGG | + | chr1.1:56633861-56633880 | MS.gene52976:intron | 35.0% | |
| TTGATAAGTTGCAAGGAAGA+TGG | + | chr1.1:56633393-56633412 | MS.gene52976:CDS | 35.0% | |
| ! | CTTGTTCTTGTTTCTTTCCT+AGG | + | chr1.1:56632209-56632228 | MS.gene52976:CDS | 35.0% |
| ! | TCTCATTAGCTTAGCTTCTT+TGG | + | chr1.1:56632405-56632424 | MS.gene52976:intron | 35.0% |
| !! | AATATAGTGGACCTTCAGTT+GGG | + | chr1.1:56633763-56633782 | MS.gene52976:CDS | 35.0% |
| !! | TAATATAGTGGACCTTCAGT+TGG | + | chr1.1:56633762-56633781 | MS.gene52976:CDS | 35.0% |
| !!! | ACATAAGGATTTTGGAATGG+TGG | + | chr1.1:56633161-56633180 | MS.gene52976:intron | 35.0% |
| AAAACCACAGTGAAGACAAC+CGG | + | chr1.1:56634023-56634042 | MS.gene52976:CDS | 40.0% | |
| AAGGGGGAAGTAGAATCAAA+AGG | - | chr1.1:56632355-56632374 | None:intergenic | 40.0% | |
| AATGTGGCAGTTACTTCAAG+GGG | - | chr1.1:56633808-56633827 | None:intergenic | 40.0% | |
| ACAAACCACTCACAGTAAAG+AGG | - | chr1.1:56633964-56633983 | None:intergenic | 40.0% | |
| ACTTATCAAGGTTGTCTGTG+AGG | - | chr1.1:56633382-56633401 | None:intergenic | 40.0% | |
| AGCAGCAGCTTTCACAATAA+GGG | - | chr1.1:56632287-56632306 | None:intergenic | 40.0% | |
| ATAAGCCCGTTTATCTGAAC+AGG | + | chr1.1:56632921-56632940 | MS.gene52976:intron | 40.0% | |
| CAGAAGATTGAACTTCAAGG+GGG | - | chr1.1:56632371-56632390 | None:intergenic | 40.0% | |
| CCACAATCTAATAGAGGAAG+TGG | + | chr1.1:56634101-56634120 | MS.gene52976:CDS | 40.0% | |
| CCACTTCCTCTATTAGATTG+TGG | - | chr1.1:56634104-56634123 | None:intergenic | 40.0% | |
| CCAGAAGATTGAACTTCAAG+GGG | - | chr1.1:56632372-56632391 | None:intergenic | 40.0% | |
| CTAATGTGGCAGTTACTTCA+AGG | - | chr1.1:56633810-56633829 | None:intergenic | 40.0% | |
| CTCAAATTCCAGATGCATTG+AGG | + | chr1.1:56634078-56634097 | MS.gene52976:CDS | 40.0% | |
| GACAACCTTGATAAGTTGCA+AGG | + | chr1.1:56633386-56633405 | MS.gene52976:CDS | 40.0% | |
| GACCAGAAGATTGAACTTCA+AGG | - | chr1.1:56632374-56632393 | None:intergenic | 40.0% | |
| GCTTTCACAATAAGGGATGA+AGG | - | chr1.1:56632280-56632299 | None:intergenic | 40.0% | |
| TAAGCCCGTTTATCTGAACA+GGG | + | chr1.1:56632922-56632941 | MS.gene52976:intron | 40.0% | |
| TTGAGGCCACAATCTAATAG+AGG | + | chr1.1:56634095-56634114 | MS.gene52976:CDS | 40.0% | |
| ! | ATTTGAGGCAAATCTAGAGG+TGG | - | chr1.1:56634065-56634084 | None:intergenic | 40.0% |
| ! | CTCAATGCATCTGGAATTTG+AGG | - | chr1.1:56634080-56634099 | None:intergenic | 40.0% |
| ! | GGAATTTGAGGCAAATCTAG+AGG | - | chr1.1:56634068-56634087 | None:intergenic | 40.0% |
| ! | TAGTTGTGTAAGGGTTTGCT+TGG | - | chr1.1:56633142-56633161 | None:intergenic | 40.0% |
| ! | TGAGTGGTTTGTGATGATTC+AGG | + | chr1.1:56633972-56633991 | MS.gene52976:intron | 40.0% |
| AAACCACAGTGAAGACAACC+GGG | + | chr1.1:56634024-56634043 | MS.gene52976:CDS | 45.0% | |
| AAATGTATTTAGGCCCCCTC+TGG | + | chr1.1:56632678-56632697 | MS.gene52976:intron | 45.0% | |
| AACCACTCACAGTAAAGAGG+CGG | - | chr1.1:56633961-56633980 | None:intergenic | 45.0% | |
| AAGGAACTTGAAGAAGCTGG+AGG | + | chr1.1:56633347-56633366 | MS.gene52976:CDS | 45.0% | |
| ACATTGATGCTGTTGCTCCT+AGG | - | chr1.1:56632229-56632248 | None:intergenic | 45.0% | |
| AGGCTCCTTCCTATAACTCT+TGG | + | chr1.1:56633485-56633504 | MS.gene52976:CDS | 45.0% | |
| CAGACCTGTCCAAGAGTTAT+AGG | - | chr1.1:56633497-56633516 | None:intergenic | 45.0% | |
| CAGCAGCAGCTTTCACAATA+AGG | - | chr1.1:56632288-56632307 | None:intergenic | 45.0% | |
| CCCCTTGAAGTTCAATCTTC+TGG | + | chr1.1:56632369-56632388 | MS.gene52976:CDS | 45.0% | |
| CCTGTCCAAGAGTTATAGGA+AGG | - | chr1.1:56633493-56633512 | None:intergenic | 45.0% | |
| CCTTCCTATAACTCTTGGAC+AGG | + | chr1.1:56633490-56633509 | MS.gene52976:CDS | 45.0% | |
| CTTGCCCTGTTCAGATAAAC+GGG | - | chr1.1:56632929-56632948 | None:intergenic | 45.0% | |
| GCTAAGGAACTTGAAGAAGC+TGG | + | chr1.1:56633344-56633363 | MS.gene52976:CDS | 45.0% | |
| GCTCACAAATTTGAGCTCGT+AGG | + | chr1.1:56633829-56633848 | MS.gene52976:CDS | 45.0% | |
| GCTTGCCCTGTTCAGATAAA+CGG | - | chr1.1:56632930-56632949 | None:intergenic | 45.0% | |
| GGAGATCAAAGCACACACAT+AGG | - | chr1.1:56633642-56633661 | None:intergenic | 45.0% | |
| TGGCAACTGTGAAAATGTCC+CGG | - | chr1.1:56634045-56634064 | None:intergenic | 45.0% | |
| AGGAGATAGAGGCGAGCTAA+GGG | + | chr1.1:56634169-56634188 | MS.gene52976:CDS | 50.0% | |
| AGGGGTGAAGAAGGAGATTG+AGG | - | chr1.1:56632150-56632169 | None:intergenic | 50.0% | |
| ATAGGAAGGAGCCTTCCTGT+GGG | - | chr1.1:56633479-56633498 | None:intergenic | 50.0% | |
| CCTACAAAAGGCAGATGCTG+CGG | + | chr1.1:56633322-56633341 | MS.gene52976:CDS | 50.0% | |
| GAGAAGTTGAGGGGTGAAGA+AGG | - | chr1.1:56632159-56632178 | None:intergenic | 50.0% | |
| GATTGTGGCCTCAATGCATC+TGG | - | chr1.1:56634089-56634108 | None:intergenic | 50.0% | |
| GCTGTTGCTGGGCTAAATAG+AGG | + | chr1.1:56633278-56633297 | MS.gene52976:CDS | 50.0% | |
| GGGGTGAAGAAGGAGATTGA+GGG | - | chr1.1:56632149-56632168 | None:intergenic | 50.0% | |
| GGGTGAGAGAGAGAAGTTGA+GGG | - | chr1.1:56632169-56632188 | None:intergenic | 50.0% | |
| GGTGAGAGAGAGAAGTTGAG+GGG | - | chr1.1:56632168-56632187 | None:intergenic | 50.0% | |
| GTTGCTCAGTTGCAACTTCC+AGG | - | chr1.1:56633578-56633597 | None:intergenic | 50.0% | |
| TATAGGAAGGAGCCTTCCTG+TGG | - | chr1.1:56633480-56633499 | None:intergenic | 50.0% | |
| TCTCCTCTCGTACTCTAGGT+GGG | + | chr1.1:56633438-56633457 | MS.gene52976:CDS | 50.0% | |
| TTCTCCTCTCGTACTCTAGG+TGG | + | chr1.1:56633437-56633456 | MS.gene52976:CDS | 50.0% | |
| AAAGGCAGATGCTGCGGCTA+AGG | + | chr1.1:56633328-56633347 | MS.gene52976:CDS | 55.0% | |
| ACCTTCAGTTGGGTGCTCCA+TGG | + | chr1.1:56633773-56633792 | MS.gene52976:CDS | 55.0% | |
| GACCGCCTCTTTACTGTGAG+TGG | + | chr1.1:56633956-56633975 | MS.gene52976:intron | 55.0% | |
| GAGGAGATAGAGGCGAGCTA+AGG | + | chr1.1:56634168-56634187 | MS.gene52976:CDS | 55.0% | |
| GCGTTCTCCTCTCGTACTCT+AGG | + | chr1.1:56633434-56633453 | MS.gene52976:CDS | 55.0% | |
| GGGGTGAGAGAGAGAAGTTG+AGG | - | chr1.1:56632170-56632189 | None:intergenic | 55.0% | |
| GTGGCAGTTACTTCAAGGGG+CGG | - | chr1.1:56633805-56633824 | None:intergenic | 55.0% | |
| GTTACTTCAAGGGGCGGTAG+AGG | - | chr1.1:56633799-56633818 | None:intergenic | 55.0% | |
| TAGCTCGCCTCTATCTCCTC+TGG | - | chr1.1:56634168-56634187 | None:intergenic | 55.0% | |
| TGTCCCGGTTGTCTTCACTG+TGG | - | chr1.1:56634030-56634049 | None:intergenic | 55.0% | |
| ! | CCGCAGCATCTGCCTTTTGT+AGG | - | chr1.1:56633325-56633344 | None:intergenic | 55.0% |
| ! | CTCTATCTCCTCTGGTGACG+CGG | - | chr1.1:56634160-56634179 | None:intergenic | 55.0% |
| ! | TCTATCTCCTCTGGTGACGC+GGG | - | chr1.1:56634159-56634178 | None:intergenic | 55.0% |
| !! | ATGCTGCAGAGTGCTGTTGC+TGG | + | chr1.1:56633266-56633285 | MS.gene52976:intron | 55.0% |
| !! | TGCTGCAGAGTGCTGTTGCT+GGG | + | chr1.1:56633267-56633286 | MS.gene52976:intron | 55.0% |
| CGCGTCACCAGAGGAGATAG+AGG | + | chr1.1:56634158-56634177 | MS.gene52976:CDS | 60.0% | |
| GCTCCCACCTAGAGTACGAG+AGG | - | chr1.1:56633444-56633463 | None:intergenic | 60.0% | |
| TTCCTGTGGGAGGTCCAGGA+CGG | - | chr1.1:56633466-56633485 | None:intergenic | 60.0% | |
| ! | GCCATGGAGCACCCAACTGA+AGG | - | chr1.1:56633777-56633796 | None:intergenic | 60.0% |
| ACTCTAGGTGGGAGCCGTCC+TGG | + | chr1.1:56633449-56633468 | MS.gene52976:CDS | 65.0% | |
| AGCCTTCCTGTGGGAGGTCC+AGG | - | chr1.1:56633470-56633489 | None:intergenic | 65.0% | |
| GCAGATACCCGCGTCACCAG+AGG | + | chr1.1:56634149-56634168 | MS.gene52976:CDS | 65.0% | |
| GGAAGGAGCCTTCCTGTGGG+AGG | - | chr1.1:56633476-56633495 | None:intergenic | 65.0% | |
| GTCCTGGACCTCCCACAGGA+AGG | + | chr1.1:56633465-56633484 | MS.gene52976:CDS | 65.0% | |
| TCAAGGGGCGGTAGAGGCCA+TGG | - | chr1.1:56633793-56633812 | None:intergenic | 65.0% | |
| AGCCGTCCTGGACCTCCCAC+AGG | + | chr1.1:56633461-56633480 | MS.gene52976:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 56632139 | 56634208 | 56632139 | ID=MS.gene52976 |
| chr1.1 | mRNA | 56632139 | 56634208 | 56632139 | ID=MS.gene52976.t1;Parent=MS.gene52976 |
| chr1.1 | exon | 56632139 | 56632390 | 56632139 | ID=MS.gene52976.t1.exon1;Parent=MS.gene52976.t1 |
| chr1.1 | CDS | 56632139 | 56632390 | 56632139 | ID=cds.MS.gene52976.t1;Parent=MS.gene52976.t1 |
| chr1.1 | exon | 56633275 | 56633511 | 56633275 | ID=MS.gene52976.t1.exon2;Parent=MS.gene52976.t1 |
| chr1.1 | CDS | 56633275 | 56633511 | 56633275 | ID=cds.MS.gene52976.t1;Parent=MS.gene52976.t1 |
| chr1.1 | exon | 56633724 | 56633850 | 56633724 | ID=MS.gene52976.t1.exon3;Parent=MS.gene52976.t1 |
| chr1.1 | CDS | 56633724 | 56633850 | 56633724 | ID=cds.MS.gene52976.t1;Parent=MS.gene52976.t1 |
| chr1.1 | exon | 56633994 | 56634208 | 56633994 | ID=MS.gene52976.t1.exon4;Parent=MS.gene52976.t1 |
| chr1.1 | CDS | 56633994 | 56634208 | 56633994 | ID=cds.MS.gene52976.t1;Parent=MS.gene52976.t1 |
| Gene Sequence |
| Protein sequence |
