AlfalfaGEDB | MS.gene057807

M. sativa cultivar XinJiangDaYe / MS.gene057807

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057807.t1	XP_003607123.1	94.6	92	5	0	1	92	1	92	6.10E-41	176.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057807.t1	P33080	69.6	92	28	0	1	92	1	92	4.4e-32	138.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057807.t1	G7JL45	94.6	92	5	0	1	92	1	92	4.4e-41	176.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene057807	MS.gene062964	0.860197	2.44E-63	-1.69E-46
MS.gene057807	MS.gene50651	0.801631	8.22E-49	-1.69E-46
MS.gene057807	MS.gene50664	0.867714	1.12E-65	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene057807	MS.gene50675	PPI
MS.gene003602	MS.gene057807	PPI
MS.gene057807	MS.gene014670	PPI
MS.gene057807	MS.gene062943	PPI
MS.gene057807	MS.gene045368	PPI
MS.gene057807	MS.gene40327	PPI
MS.gene062984	MS.gene057807	PPI
MS.gene057807	MS.gene045361	PPI
MS.gene031201	MS.gene057807	PPI
MS.gene057807	MS.gene75314	PPI
MS.gene057807	MS.gene01764	PPI
MS.gene057807	MS.gene75679	PPI
MS.gene057807	MS.gene40325	PPI
MS.gene057807	MS.gene057778	PPI
MS.gene003587	MS.gene057807	PPI
MS.gene057807	MS.gene68760	PPI
MS.gene057807	MS.gene031198	PPI
MS.gene057807	MS.gene50676	PPI
MS.gene057807	MS.gene057797	PPI
MS.gene057807	MS.gene003614	PPI
MS.gene003590	MS.gene057807	PPI
MS.gene057807	MS.gene77528	PPI
MS.gene057807	MS.gene75316	PPI
MS.gene057807	MS.gene014671	PPI
MS.gene057807	MS.gene003596	PPI
MS.gene057807	MS.gene003615	PPI
MS.gene057807	MS.gene003577	PPI
MS.gene057807	MS.gene23371	PPI
MS.gene057807	MS.gene75672	PPI
MS.gene057807	MS.gene75674	PPI
MS.gene057807	MS.gene50654	PPI
MS.gene057807	MS.gene062974	PPI
MS.gene057807	MS.gene003583	PPI
MS.gene057807	MS.gene062951	PPI
MS.gene057807	MS.gene057801	PPI
MS.gene057807	MS.gene77527	PPI
MS.gene057807	MS.gene003591	PPI
MS.gene057807	MS.gene77524	PPI
MS.gene057807	MS.gene057795	PPI
MS.gene057807	MS.gene68162	PPI
MS.gene057807	MS.gene045363	PPI
MS.gene057807	MS.gene75675	PPI
MS.gene057807	MS.gene79887	PPI
MS.gene057807	MS.gene50652	PPI
MS.gene057807	MS.gene68761	PPI
MS.gene057807	MS.gene68165	PPI
MS.gene057807	MS.gene75677	PPI
MS.gene057807	MS.gene50677	PPI
MS.gene057807	MS.gene79890	PPI
MS.gene057807	MS.gene77523	PPI
MS.gene057807	MS.gene50684	PPI
MS.gene057807	MS.gene045362	PPI
MS.gene057807	MS.gene23372	PPI
MS.gene057807	MS.gene014668	PPI
MS.gene057807	MS.gene79886	PPI
MS.gene057807	MS.gene50765	PPI
MS.gene057807	MS.gene014667	PPI
MS.gene057807	MS.gene062988	PPI
MS.gene057807	MS.gene003624	PPI
MS.gene057807	MS.gene003586	PPI
MS.gene057807	MS.gene003627	PPI
MS.gene062952	MS.gene057807	PPI
MS.gene057807	MS.gene003608	PPI
MS.gene057807	MS.gene79891	PPI
MS.gene057807	MS.gene045367	PPI
MS.gene057807	MS.gene045364	PPI
MS.gene23370	MS.gene057807	PPI
MS.gene50766	MS.gene057807	PPI
MS.gene003594	MS.gene057807	PPI
MS.gene057807	MS.gene062973	PPI
MS.gene50665	MS.gene057807	PPI
MS.gene003625	MS.gene057807	PPI
MS.gene057807	MS.gene014669	PPI
MS.gene057807	MS.gene057808	PPI
MS.gene057807	MS.gene002380	PPI
MS.gene057807	MS.gene77526	PPI
MS.gene057807	MS.gene063112	PPI
MS.gene057807	MS.gene045366	PPI
MS.gene50763	MS.gene057807	PPI
MS.gene045365	MS.gene057807	PPI
MS.gene057807	MS.gene68163	PPI
MS.gene057807	MS.gene057790	PPI
MS.gene057807	MS.gene75315	PPI
MS.gene50659	MS.gene057807	PPI
MS.gene057807	MS.gene057818	PPI
MS.gene057807	MS.gene68164	PPI
MS.gene057807	MS.gene062979	PPI
MS.gene057807	MS.gene68759	PPI
MS.gene057807	MS.gene79889	PPI
MS.gene057807	MS.gene031200	PPI
MS.gene057807	MS.gene045360	PPI
MS.gene057807	MS.gene014222	PPI
MS.gene057807	MS.gene79888	PPI
MS.gene057807	MS.gene75676	PPI
MS.gene057807	MS.gene40326	PPI
MS.gene057807	MS.gene75678	PPI
MS.gene057807	MS.gene031199	PPI
MS.gene057807	MS.gene50687	PPI
MS.gene77529	MS.gene057807	PPI
MS.gene057807	MS.gene014223	PPI
MS.gene057807	MS.gene75673	PPI
MS.gene057807	MS.gene79885	PPI
MS.gene057807	MS.gene047517	PPI
MS.gene057807	MS.gene01358	PPI
MS.gene057807	MS.gene50764	PPI
MS.gene057807	MS.gene062963	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057807.t1	MTR_4g072500	94.565	92	5	0	1	92	1	92	2.24e-61	181
MS.gene057807.t1	MTR_4g072530	94.444	90	5	0	1	90	1	90	3.95e-60	178
MS.gene057807.t1	MTR_4g072640	89.011	91	10	0	1	91	1	91	5.00e-57	170
MS.gene057807.t1	MTR_4g072570	78.261	92	20	0	1	92	1	92	2.37e-49	151
MS.gene057807.t1	MTR_4g072310	73.118	93	24	1	1	92	1	93	1.86e-48	149
MS.gene057807.t1	MTR_4g072480	77.174	92	21	0	1	92	1	92	2.67e-48	148
MS.gene057807.t1	MTR_4g072680	77.174	92	21	0	1	92	1	92	5.28e-48	147
MS.gene057807.t1	MTR_4g072730	76.667	90	21	0	1	90	1	90	1.40e-47	146
MS.gene057807.t1	MTR_3g084150	73.913	92	24	0	1	92	1	92	1.64e-47	146
MS.gene057807.t1	MTR_4g072880	70.968	93	26	1	1	92	1	93	2.89e-47	146
MS.gene057807.t1	MTR_4g072230	74.194	93	21	2	1	92	1	91	3.46e-47	145
MS.gene057807.t1	MTR_4g072620	75.000	92	23	0	1	92	1	92	5.35e-47	145
MS.gene057807.t1	MTR_3g084180	72.826	92	25	0	1	92	1	92	3.86e-46	143
MS.gene057807.t1	MTR_4g072860	73.118	93	24	1	1	92	1	93	4.06e-46	143
MS.gene057807.t1	MTR_8g461410	71.739	92	26	0	1	92	1	92	4.26e-46	143
MS.gene057807.t1	MTR_4g072460	75.000	92	23	0	1	92	1	92	5.72e-46	142
MS.gene057807.t1	MTR_4g072270	69.892	93	27	1	1	92	1	93	9.05e-46	142
MS.gene057807.t1	MTR_4g072250	72.043	93	24	2	1	92	1	92	2.72e-45	140
MS.gene057807.t1	MTR_4g072240	68.132	91	28	1	1	90	1	91	5.33e-45	140
MS.gene057807.t1	MTR_3g117630	73.563	87	23	0	6	92	6	92	8.51e-45	139
MS.gene057807.t1	MTR_4g072870	68.132	91	28	1	1	90	1	91	9.32e-45	139
MS.gene057807.t1	MTR_3g084240	73.118	93	23	2	1	92	1	92	1.36e-44	139
MS.gene057807.t1	MTR_4g072220	67.742	93	29	1	1	92	1	93	1.98e-44	139
MS.gene057807.t1	MTR_3g084170	73.118	93	23	2	1	92	1	92	4.77e-44	137
MS.gene057807.t1	MTR_4g050700	69.892	93	27	1	1	92	1	93	5.19e-44	137
MS.gene057807.t1	MTR_2g012410	69.892	93	27	1	1	92	1	93	5.19e-44	137
MS.gene057807.t1	MTR_3g084250	68.478	92	29	0	1	92	1	92	1.92e-43	136
MS.gene057807.t1	MTR_3g110042	71.910	89	25	0	1	89	1	89	2.08e-43	136
MS.gene057807.t1	MTR_4g072300	64.835	91	31	1	1	90	1	91	1.27e-42	134
MS.gene057807.t1	MTR_3g084220	72.043	93	24	2	1	92	1	92	3.48e-42	133
MS.gene057807.t1	MTR_3g110038	69.892	93	26	2	1	92	1	92	4.99e-42	132
MS.gene057807.t1	MTR_4g072330	69.231	91	24	2	1	90	1	88	2.14e-41	131
MS.gene057807.t1	MTR_4g072260	63.441	93	33	1	1	92	1	93	3.58e-41	130
MS.gene057807.t1	MTR_4g072850	72.340	94	24	1	1	92	1	94	3.61e-41	130
MS.gene057807.t1	MTR_3g084190	70.652	92	27	0	1	92	1	92	7.18e-41	129
MS.gene057807.t1	MTR_4g072660	69.565	92	23	1	1	92	1	87	8.15e-41	129
MS.gene057807.t1	MTR_4g072370	69.231	91	24	2	1	90	1	88	1.01e-40	129
MS.gene057807.t1	MTR_4g072890	64.835	91	31	1	1	90	1	91	1.08e-40	129
MS.gene057807.t1	MTR_3g110032	66.667	93	30	1	1	92	1	93	1.08e-40	129
MS.gene057807.t1	MTR_8g461420	70.652	92	27	0	1	92	1	92	1.84e-40	129
MS.gene057807.t1	MTR_5g008360	75.949	79	19	0	14	92	5	83	2.59e-40	128
MS.gene057807.t1	MTR_3g084160	68.478	92	29	0	1	92	1	92	6.36e-40	127
MS.gene057807.t1	MTR_3g084210	70.652	92	27	0	1	92	1	92	1.91e-39	126
MS.gene057807.t1	MTR_4g072490	67.033	91	23	2	1	90	1	85	4.12e-39	125
MS.gene057807.t1	MTR_3g084230	69.565	92	28	0	1	92	1	92	5.58e-39	125
MS.gene057807.t1	MTR_3g084260	65.934	91	30	1	1	90	1	91	7.24e-39	124
MS.gene057807.t1	MTR_3g110045	72.222	90	25	0	3	92	62	151	8.74e-39	126
MS.gene057807.t1	MTR_4g072830	68.889	90	24	2	1	89	1	87	2.24e-38	123
MS.gene057807.t1	MTR_4g072630	67.778	90	25	1	1	90	1	86	2.25e-38	123
MS.gene057807.t1	MTR_4g072940	76.389	72	17	0	21	92	53	124	3.40e-38	124
MS.gene057807.t1	MTR_4g072540	66.667	90	26	1	1	90	1	86	3.68e-38	122
MS.gene057807.t1	MTR_5g008370	80.822	73	14	0	18	90	18	90	4.73e-38	124
MS.gene057807.t1	MTR_4g072740	65.934	91	24	2	1	90	1	85	1.24e-37	121
MS.gene057807.t1	MTR_4g072820	68.889	90	23	2	1	90	1	85	1.30e-37	121
MS.gene057807.t1	MTR_4g072580	64.835	91	25	2	1	90	1	85	2.98e-37	120
MS.gene057807.t1	MTR_4g072470	65.934	91	24	2	1	90	1	85	9.29e-37	119
MS.gene057807.t1	MTR_4g072550	77.778	72	16	0	21	92	32	103	1.33e-36	119
MS.gene057807.t1	MTR_4g072720	65.556	90	27	1	1	90	1	86	1.87e-36	118
MS.gene057807.t1	MTR_4g072600	64.835	91	25	2	1	90	1	85	2.19e-36	118
MS.gene057807.t1	MTR_4g072465	63.333	90	29	1	1	90	1	86	5.91e-36	117
MS.gene057807.t1	MTR_4g072750	68.235	85	23	2	1	81	1	85	8.52e-36	117
MS.gene057807.t1	MTR_4g072610	64.444	90	26	1	1	90	1	84	9.89e-36	116
MS.gene057807.t1	MTR_4g072650	63.736	91	27	1	1	91	1	85	3.09e-35	115
MS.gene057807.t1	MTR_4g072510	63.333	90	29	1	1	90	1	86	3.94e-35	115
MS.gene057807.t1	MTR_4g072670	62.222	90	30	1	1	90	1	86	9.47e-35	114
MS.gene057807.t1	MTR_4g072590	64.444	90	27	1	1	90	1	85	5.74e-34	112
MS.gene057807.t1	MTR_4g072290	61.290	93	21	2	1	92	1	79	2.54e-33	110
MS.gene057807.t1	MTR_4g072560	55.670	97	35	2	1	89	1	97	4.74e-32	107
MS.gene057807.t1	MTR_4g072380	62.637	91	28	3	1	90	1	86	4.97e-32	107
MS.gene057807.t1	MTR_4g072450	61.111	90	30	1	1	90	1	85	1.04e-31	106
MS.gene057807.t1	MTR_4g072690	61.111	90	30	1	1	90	1	85	2.00e-31	105
MS.gene057807.t1	MTR_4g072910	63.514	74	27	0	17	90	27	100	7.51e-31	104
MS.gene057807.t1	MTR_3g084200	68.493	73	21	2	1	72	1	72	2.79e-30	103
MS.gene057807.t1	MTR_4g072280	62.667	75	27	1	1	74	1	75	3.50e-30	102
MS.gene057807.t1	MTR_4g072980	56.522	92	37	2	1	89	1	92	1.30e-29	101
MS.gene057807.t1	MTR_4g072770	56.667	90	29	1	1	90	1	80	2.86e-29	100
MS.gene057807.t1	MTR_5g008350	60.000	80	25	2	1	79	1	74	6.21e-29	99.4
MS.gene057807.t1	MTR_3g117640	70.149	67	19	1	24	89	33	99	6.77e-28	97.4
MS.gene057807.t1	MTR_3g113310	60.606	66	25	1	24	89	41	105	3.98e-25	90.5
MS.gene057807.t1	MTR_6g077850	52.174	69	33	0	22	90	31	99	8.35e-25	89.7
MS.gene057807.t1	MTR_3g110035	60.606	66	26	0	27	92	73	138	8.94e-25	90.5
MS.gene057807.t1	MTR_3g117610	62.500	64	23	1	24	87	44	106	1.52e-23	86.7
MS.gene057807.t1	MTR_4g072190	60.606	66	25	1	24	89	35	99	3.55e-23	85.5
MS.gene057807.t1	MTR_8g461400	51.613	93	17	3	1	92	1	66	2.64e-22	82.4
MS.gene057807.t1	MTR_4g072930	56.522	69	26	1	26	90	42	110	1.44e-21	81.6
MS.gene057807.t1	MTR_5g021820	46.512	86	42	2	7	89	19	103	1.77e-20	78.6
MS.gene057807.t1	MTR_8g076040	57.812	64	26	1	24	87	40	102	2.46e-20	78.6
MS.gene057807.t1	MTR_4g124750	43.182	88	43	3	4	87	46	130	1.71e-17	72.4
MS.gene057807.t1	MTR_2g043960	46.914	81	41	2	6	85	56	135	2.06e-17	72.4
MS.gene057807.t1	MTR_4g072840	43.333	90	21	2	1	90	1	60	2.08e-16	67.0
MS.gene057807.t1	MTR_1g024085	51.471	68	32	1	16	83	28	94	2.63e-16	69.3
MS.gene057807.t1	MTR_4g005310	50.000	66	32	1	21	85	58	123	6.23e-16	68.6
MS.gene057807.t1	MTR_7g118010	50.000	68	31	2	25	90	23	89	7.65e-16	67.0
MS.gene057807.t1	MTR_4g025830	45.070	71	35	2	22	89	76	145	1.61e-15	67.4
MS.gene057807.t1	MTR_0388s0020	40.909	88	47	3	5	89	56	141	1.91e-15	67.0
MS.gene057807.t1	MTR_4g072160	50.725	69	33	1	17	85	29	96	2.97e-15	66.2
MS.gene057807.t1	MTR_1g061570	47.619	63	32	1	23	85	17	78	7.44e-15	65.1
MS.gene057807.t1	MTR_8g026730	47.059	68	33	2	25	90	27	93	1.06e-14	64.3
MS.gene057807.t1	MTR_3g092220	47.692	65	31	2	21	83	29	92	1.15e-14	64.3
MS.gene057807.t1	MTR_8g461210	40.244	82	48	1	4	85	14	94	1.36e-14	63.9
MS.gene057807.t1	MTR_1g094750	40.698	86	46	2	10	91	31	115	1.58e-14	63.9
MS.gene057807.t1	MTR_1g009150	50.000	64	31	1	22	85	68	130	6.27e-14	63.9
MS.gene057807.t1	MTR_1g059770	38.571	70	42	1	20	89	44	112	5.23e-13	60.5
MS.gene057807.t1	MTR_7g101740	46.875	64	33	1	24	87	39	101	9.14e-13	59.3
MS.gene057807.t1	MTR_4g005320	47.541	61	31	1	25	85	70	129	1.02e-12	60.5
MS.gene057807.t1	MTR_2g066830	36.893	103	43	4	2	92	41	133	1.37e-12	59.7
MS.gene057807.t1	MTR_1g063950	46.667	60	31	1	23	82	46	104	1.55e-12	58.9
MS.gene057807.t1	MTR_3g109160	41.558	77	44	1	9	85	53	128	4.76e-12	58.5
MS.gene057807.t1	MTR_3g105900	64.865	37	13	0	23	59	1170	1206	1.83e-11	58.9
MS.gene057807.t1	MTR_7g405740	39.394	66	39	1	25	90	67	131	2.03e-11	57.0
MS.gene057807.t1	MTR_8g096470	43.333	60	33	1	26	85	47	105	2.35e-11	55.5
MS.gene057807.t1	MTR_3g098970	32.955	88	57	2	5	92	34	119	2.83e-11	56.2
MS.gene057807.t1	MTR_7g104940	40.323	62	36	1	28	89	53	113	3.45e-11	55.5
MS.gene057807.t1	MTR_3g097120	39.241	79	39	2	21	91	5	82	3.74e-11	55.1
MS.gene057807.t1	MTR_8g101520	36.585	82	51	1	10	91	35	115	4.92e-11	55.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057807.t1	AT4G38840	60.000	85	33	1	7	90	15	99	4.17e-32	108
MS.gene057807.t1	AT5G18020	61.333	75	28	1	16	89	15	89	1.99e-30	103
MS.gene057807.t1	AT5G18060	62.667	75	27	1	16	89	15	89	2.94e-30	103
MS.gene057807.t1	AT4G38850	63.014	73	24	1	21	90	17	89	3.26e-30	102
MS.gene057807.t1	AT4G34770	63.095	84	26	2	9	90	22	102	3.76e-30	103
MS.gene057807.t1	AT5G18080	61.333	75	28	1	16	89	15	89	4.12e-30	102
MS.gene057807.t1	AT2G21200	65.714	70	23	1	21	89	17	86	9.45e-30	101
MS.gene057807.t1	AT5G18050	61.538	78	27	2	13	89	14	89	1.36e-29	101
MS.gene057807.t1	AT5G18030	62.857	70	25	1	22	90	19	88	2.96e-29	100
MS.gene057807.t1	AT3G03840	62.500	72	25	1	21	90	23	94	3.23e-29	100
MS.gene057807.t1	AT4G38825	60.000	75	29	1	17	90	15	89	1.35e-28	99.0
MS.gene057807.t1	AT5G18010	57.895	76	31	1	16	90	15	90	2.45e-28	98.2
MS.gene057807.t1	AT3G03850	66.197	71	22	1	22	90	22	92	2.50e-28	98.2
MS.gene057807.t1	AT2G21210	63.235	68	23	1	25	90	28	95	2.82e-28	98.2
MS.gene057807.t1	AT3G03820	61.644	73	25	1	21	90	23	95	3.21e-28	98.2
MS.gene057807.t1	AT2G21210	63.235	68	23	1	25	90	95	162	1.55e-27	98.6
MS.gene057807.t1	AT4G34800	55.294	85	31	2	1	82	1	81	1.38e-26	94.0
MS.gene057807.t1	AT3G03830	51.136	88	36	2	10	90	5	92	2.14e-26	93.6
MS.gene057807.t1	AT4G34810	67.742	62	16	1	25	82	48	109	8.48e-26	92.8
MS.gene057807.t1	AT4G13790	52.941	85	32	3	7	89	13	91	2.99e-25	90.5
MS.gene057807.t1	AT4G34790	68.657	67	18	2	25	88	39	105	9.35e-25	89.7
MS.gene057807.t1	AT4G34780	61.429	70	24	1	25	91	28	97	5.09e-23	85.1
MS.gene057807.t1	AT4G38860	58.209	67	28	0	24	90	39	105	9.65e-23	84.7
MS.gene057807.t1	AT1G75580	63.077	65	23	1	25	89	44	107	1.00e-22	84.7
MS.gene057807.t1	AT4G34760	59.091	66	26	1	24	89	42	106	1.80e-22	84.0
MS.gene057807.t1	AT2G21220	56.716	67	28	1	23	89	38	103	2.77e-22	83.2
MS.gene057807.t1	AT2G16580	56.061	66	28	1	24	89	43	107	2.09e-19	76.3
MS.gene057807.t1	AT1G19830	59.701	67	25	2	24	89	47	112	8.26e-19	74.7
MS.gene057807.t1	AT4G36110	54.688	64	28	1	24	87	39	101	4.35e-18	72.8
MS.gene057807.t1	AT2G18010	54.688	64	28	1	24	87	47	109	5.51e-18	72.8
MS.gene057807.t1	AT3G43120	45.833	72	38	1	14	85	68	138	6.45e-18	73.6
MS.gene057807.t1	AT5G66260	51.515	66	31	1	25	90	34	98	6.09e-17	69.7
MS.gene057807.t1	AT3G20220	45.833	72	37	2	15	85	37	107	1.37e-16	69.3
MS.gene057807.t1	AT5G20810	51.613	62	29	1	24	85	78	138	1.96e-16	70.1
MS.gene057807.t1	AT5G20810	51.613	62	29	1	24	85	78	138	3.31e-16	70.1
MS.gene057807.t1	AT1G75590	46.575	73	38	1	11	83	28	99	6.32e-16	68.6
MS.gene057807.t1	AT3G60690	47.222	72	34	2	21	89	84	154	9.62e-16	68.6
MS.gene057807.t1	AT4G34750	46.154	65	34	1	23	87	35	98	2.85e-15	66.6
MS.gene057807.t1	AT4G34750	46.154	65	34	1	23	87	35	98	2.85e-15	66.6
MS.gene057807.t1	AT3G61900	39.286	84	47	2	10	90	15	97	4.07e-15	65.9
MS.gene057807.t1	AT5G10990	50.820	61	29	1	23	83	39	98	4.89e-15	65.9
MS.gene057807.t1	AT2G45210	44.444	72	36	2	21	89	75	145	5.89e-15	66.2
MS.gene057807.t1	AT1G19840	45.333	75	40	1	9	83	25	98	7.97e-15	65.5
MS.gene057807.t1	AT2G46690	41.892	74	39	2	17	87	16	88	1.45e-14	64.3
MS.gene057807.t1	AT3G51200	50.000	60	28	2	24	82	38	96	1.66e-13	61.2
MS.gene057807.t1	AT4G00880	50.000	64	29	2	24	85	27	89	2.93e-13	60.8
MS.gene057807.t1	AT2G36210	39.726	73	44	0	15	87	44	116	3.06e-13	61.2
MS.gene057807.t1	AT5G53590	43.836	73	35	2	24	91	45	116	5.91e-13	60.5
MS.gene057807.t1	AT2G37030	46.032	63	33	1	24	86	48	109	7.74e-13	59.7
MS.gene057807.t1	AT4G31320	42.857	77	37	2	9	85	70	139	1.17e-12	60.8
MS.gene057807.t1	AT4G12410	46.875	64	30	2	25	85	76	138	2.74e-12	59.3
MS.gene057807.t1	AT3G03847	65.000	40	14	0	43	82	88	127	3.37e-12	58.2
MS.gene057807.t1	AT2G24400	42.169	83	41	2	9	91	54	129	4.10e-12	58.9
MS.gene057807.t1	AT4G22620	42.647	68	35	2	21	85	75	141	5.07e-12	58.5
MS.gene057807.t1	AT3G12830	38.272	81	48	2	10	90	36	114	6.76e-12	57.4
MS.gene057807.t1	AT4G09530	53.191	47	20	1	22	66	25	71	1.09e-11	56.2
MS.gene057807.t1	AT3G09870	45.714	70	35	2	18	85	38	106	2.49e-11	55.8
MS.gene057807.t1	AT1G56150	43.939	66	36	1	25	90	38	102	5.13e-11	54.7

Find 20 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTCAAGTATGATAT+TGG	0.247037	4.4:-36714846	None:intergenic
CATCAAGCCGAAGAAGAATT+TGG	0.272445	4.4:+36714888	MS.gene057807:CDS
ATCATATCCAAATTCTTCTT+CGG	0.372966	4.4:-36714895	None:intergenic
GTTGGTTCAAGTATGATATT+GGG	0.382183	4.4:-36714845	None:intergenic
TACACTGCAACATAACCCTT+TGG	0.462446	4.4:-36714792	None:intergenic
CCGTTTAAATGTTATTCGAC+GGG	0.490221	4.4:+36714725	MS.gene057807:CDS
GATATCTTCAGTACAATGAA+TGG	0.495779	4.4:-36714937	None:intergenic
GCAATTCTTGAAACAATGGT+TGG	0.506239	4.4:-36714863	None:intergenic
CCCGTCGAATAACATTTAAA+CGG	0.509917	4.4:-36714725	None:intergenic
GGTTATGTTGCAGTGTATGT+TGG	0.510283	4.4:+36714798	MS.gene057807:CDS
TCCGTTTAAATGTTATTCGA+CGG	0.527380	4.4:+36714724	MS.gene057807:CDS
AAAATCAGCAGAAGTTCCAA+AGG	0.578786	4.4:+36714776	MS.gene057807:CDS
ATGAATGGTGAGTCCACCCA+TGG	0.584103	4.4:-36714922	None:intergenic
ATTTGGATATGATCATCCCA+TGG	0.585205	4.4:+36714905	MS.gene057807:CDS
TGTAGCAATTCTTGAAACAA+TGG	0.591172	4.4:-36714867	None:intergenic
AAATCAGCAGAAGTTCCAAA+GGG	0.600409	4.4:+36714777	MS.gene057807:CDS
TTTGGATATGATCATCCCAT+GGG	0.624132	4.4:+36714906	MS.gene057807:CDS
GGATATGATCATCCCATGGG+TGG	0.643553	4.4:+36714909	MS.gene057807:CDS
TGAATGGTGAGTCCACCCAT+GGG	0.727959	4.4:-36714921	None:intergenic
ATGTTGGAGAGAAACAGAAG+CGG	0.743921	4.4:+36714814	MS.gene057807:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATCATATCCAAATTCTTCTT+CGG	-	chr4.4:36714898-36714917	None:intergenic	25.0%
	GATATCTTCAGTACAATGAA+TGG	-	chr4.4:36714940-36714959	None:intergenic	30.0%
	TCCGTTTAAATGTTATTCGA+CGG	+	chr4.4:36714724-36714743	MS.gene057807:CDS	30.0%
	TGTAGCAATTCTTGAAACAA+TGG	-	chr4.4:36714870-36714889	None:intergenic	30.0%
!	GTTGGTTCAAGTATGATATT+GGG	-	chr4.4:36714848-36714867	None:intergenic	30.0%
	AAAATCAGCAGAAGTTCCAA+AGG	+	chr4.4:36714776-36714795	MS.gene057807:CDS	35.0%
	AAATCAGCAGAAGTTCCAAA+GGG	+	chr4.4:36714777-36714796	MS.gene057807:CDS	35.0%
	ATTTGGATATGATCATCCCA+TGG	+	chr4.4:36714905-36714924	MS.gene057807:CDS	35.0%
	CCCGTCGAATAACATTTAAA+CGG	-	chr4.4:36714728-36714747	None:intergenic	35.0%
	CCGTTTAAATGTTATTCGAC+GGG	+	chr4.4:36714725-36714744	MS.gene057807:CDS	35.0%
	GCAATTCTTGAAACAATGGT+TGG	-	chr4.4:36714866-36714885	None:intergenic	35.0%
	TTTGGATATGATCATCCCAT+GGG	+	chr4.4:36714906-36714925	MS.gene057807:CDS	35.0%
!	GGTTGGTTCAAGTATGATAT+TGG	-	chr4.4:36714849-36714868	None:intergenic	35.0%
	ATGTTGGAGAGAAACAGAAG+CGG	+	chr4.4:36714814-36714833	MS.gene057807:CDS	40.0%
	CATCAAGCCGAAGAAGAATT+TGG	+	chr4.4:36714888-36714907	MS.gene057807:CDS	40.0%
	GGTTATGTTGCAGTGTATGT+TGG	+	chr4.4:36714798-36714817	MS.gene057807:CDS	40.0%
	TACACTGCAACATAACCCTT+TGG	-	chr4.4:36714795-36714814	None:intergenic	40.0%
!!!	CTGCTGATTTTAGTGCTGCT+TGG	-	chr4.4:36714767-36714786	None:intergenic	45.0%
	ATGAATGGTGAGTCCACCCA+TGG	-	chr4.4:36714925-36714944	None:intergenic	50.0%
	GGATATGATCATCCCATGGG+TGG	+	chr4.4:36714909-36714928	MS.gene057807:CDS	50.0%
	TGAATGGTGAGTCCACCCAT+GGG	-	chr4.4:36714924-36714943	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36714717	36714995	36714717	ID=MS.gene057807
chr4.4	mRNA	36714717	36714995	36714717	ID=MS.gene057807.t1;Parent=MS.gene057807
chr4.4	exon	36714717	36714995	36714717	ID=MS.gene057807.t1.exon1;Parent=MS.gene057807.t1
chr4.4	CDS	36714717	36714995	36714717	ID=cds.MS.gene057807.t1;Parent=MS.gene057807.t1

Gene Sequence	>MS.gene057807 ATGGGTTTCCGTTTAAATGTTATTCGACGGGCATCATTCACAGCTAGCCAAGCAGCACTAAAATCAGCAGAAGTTCCAAAGGGTTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTGTTGTCCCAATATCATACTTGAACCAACCATTGTTTCAAGAATTGCTACATCAAGCCGAAGAAGAATTTGGATATGATCATCCCATGGGTGGACTCACCATTCATTGTACTGAAGATATCTTTCAACACATAACTTCTCACTTGAATGAGCTATGA
Protein sequence	>MS.gene057807.t1 MGFRLNVIRRASFTASQAALKSAEVPKGYVAVYVGEKQKRFVVPISYLNQPLFQELLHQAEEEFGYDHPMGGLTIHCTEDIFQHITSHLNEL