Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50651.t1 | XP_003607121.1 | 96.1 | 76 | 3 | 0 | 1 | 76 | 1 | 76 | 2.60E-32 | 148.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50651.t1 | P33080 | 74.4 | 78 | 20 | 0 | 1 | 78 | 1 | 78 | 1.6e-27 | 123.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50651.t1 | G7JM95 | 96.1 | 76 | 3 | 0 | 1 | 76 | 1 | 76 | 1.9e-32 | 148.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene50651 | 0.800941 | 1.14E-48 | -1.69E-46 |
MS.gene049151 | MS.gene50651 | 0.808309 | 3.30E-50 | -1.69E-46 |
MS.gene049153 | MS.gene50651 | 0.800208 | 1.61E-48 | -1.69E-46 |
MS.gene049346 | MS.gene50651 | 0.838831 | 2.28E-57 | -1.69E-46 |
MS.gene049758 | MS.gene50651 | 0.844378 | 7.84E-59 | -1.69E-46 |
MS.gene049910 | MS.gene50651 | 0.804083 | 2.56E-49 | -1.69E-46 |
MS.gene049915 | MS.gene50651 | 0.838833 | 2.27E-57 | -1.69E-46 |
MS.gene050128 | MS.gene50651 | 0.849583 | 2.95E-60 | -1.69E-46 |
MS.gene050301 | MS.gene50651 | 0.821655 | 3.60E-53 | -1.69E-46 |
MS.gene050397 | MS.gene50651 | 0.80336 | 3.62E-49 | -1.69E-46 |
MS.gene050406 | MS.gene50651 | 0.805704 | 1.17E-49 | -1.69E-46 |
MS.gene051860 | MS.gene50651 | 0.810172 | 1.32E-50 | -1.69E-46 |
MS.gene052078 | MS.gene50651 | 0.806828 | 6.81E-50 | -1.69E-46 |
MS.gene052178 | MS.gene50651 | 0.827153 | 1.83E-54 | -1.69E-46 |
MS.gene052188 | MS.gene50651 | 0.817634 | 2.98E-52 | -1.69E-46 |
MS.gene052253 | MS.gene50651 | 0.819711 | 1.01E-52 | -1.69E-46 |
MS.gene052255 | MS.gene50651 | 0.838836 | 2.27E-57 | -1.69E-46 |
MS.gene052340 | MS.gene50651 | 0.850691 | 1.44E-60 | -1.69E-46 |
MS.gene053073 | MS.gene50651 | 0.828528 | 8.55E-55 | -1.69E-46 |
MS.gene053074 | MS.gene50651 | 0.804605 | 1.99E-49 | -1.69E-46 |
MS.gene05316 | MS.gene50651 | 0.801484 | 8.81E-49 | -1.69E-46 |
MS.gene053181 | MS.gene50651 | 0.810622 | 1.05E-50 | -1.69E-46 |
MS.gene053557 | MS.gene50651 | 0.828743 | 7.59E-55 | -1.69E-46 |
MS.gene053559 | MS.gene50651 | 0.80364 | 3.17E-49 | -1.69E-46 |
MS.gene053836 | MS.gene50651 | 0.843532 | 1.32E-58 | -1.69E-46 |
MS.gene054184 | MS.gene50651 | 0.839019 | 2.03E-57 | -1.69E-46 |
MS.gene054185 | MS.gene50651 | 0.836794 | 7.59E-57 | -1.69E-46 |
MS.gene054542 | MS.gene50651 | 0.820535 | 6.52E-53 | -1.69E-46 |
MS.gene054618 | MS.gene50651 | 0.800044 | 1.73E-48 | -1.69E-46 |
MS.gene055116 | MS.gene50651 | 0.823994 | 1.03E-53 | -1.69E-46 |
MS.gene055133 | MS.gene50651 | 0.823817 | 1.13E-53 | -1.69E-46 |
MS.gene055277 | MS.gene50651 | 0.801188 | 1.01E-48 | -1.69E-46 |
MS.gene055422 | MS.gene50651 | 0.828389 | 9.24E-55 | -1.69E-46 |
MS.gene056191 | MS.gene50651 | 0.829913 | 3.94E-55 | -1.69E-46 |
MS.gene05702 | MS.gene50651 | 0.828887 | 7.00E-55 | -1.69E-46 |
MS.gene05733 | MS.gene50651 | 0.82956 | 4.81E-55 | -1.69E-46 |
MS.gene057448 | MS.gene50651 | 0.840729 | 7.30E-58 | -1.69E-46 |
MS.gene057449 | MS.gene50651 | 0.841252 | 5.32E-58 | -1.69E-46 |
MS.gene057450 | MS.gene50651 | 0.843758 | 1.15E-58 | -1.69E-46 |
MS.gene057750 | MS.gene50651 | 0.82164 | 3.63E-53 | -1.69E-46 |
MS.gene057754 | MS.gene50651 | 0.859003 | 5.58E-63 | -1.69E-46 |
MS.gene057779 | MS.gene50651 | 0.822164 | 2.74E-53 | -1.69E-46 |
MS.gene057782 | MS.gene50651 | 0.855305 | 6.90E-62 | -1.69E-46 |
MS.gene057794 | MS.gene50651 | 0.874815 | 5.03E-68 | -1.69E-46 |
MS.gene057795 | MS.gene50651 | 0.833424 | 5.38E-56 | -1.69E-46 |
MS.gene057796 | MS.gene50651 | 0.868291 | 7.28E-66 | -1.69E-46 |
MS.gene057801 | MS.gene50651 | 0.802954 | 4.39E-49 | -1.69E-46 |
MS.gene057807 | MS.gene50651 | 0.801631 | 8.22E-49 | -1.69E-46 |
MS.gene058002 | MS.gene50651 | 0.830253 | 3.26E-55 | -1.69E-46 |
MS.gene05811 | MS.gene50651 | 0.812935 | 3.30E-51 | -1.69E-46 |
MS.gene058236 | MS.gene50651 | 0.801587 | 8.39E-49 | -1.69E-46 |
MS.gene058749 | MS.gene50651 | 0.806486 | 8.04E-50 | -1.69E-46 |
MS.gene058845 | MS.gene50651 | 0.807998 | 3.84E-50 | -1.69E-46 |
MS.gene058928 | MS.gene50651 | 0.830598 | 2.68E-55 | -1.69E-46 |
MS.gene05907 | MS.gene50651 | 0.821465 | 3.98E-53 | -1.69E-46 |
MS.gene059124 | MS.gene50651 | 0.808038 | 3.77E-50 | -1.69E-46 |
MS.gene059285 | MS.gene50651 | 0.838099 | 3.52E-57 | -1.69E-46 |
MS.gene059294 | MS.gene50651 | 0.812893 | 3.37E-51 | -1.69E-46 |
MS.gene059421 | MS.gene50651 | 0.830374 | 3.04E-55 | -1.69E-46 |
MS.gene059518 | MS.gene50651 | 0.811889 | 5.58E-51 | -1.69E-46 |
MS.gene059597 | MS.gene50651 | 0.811299 | 7.50E-51 | -1.69E-46 |
MS.gene059688 | MS.gene50651 | 0.813454 | 2.54E-51 | -1.69E-46 |
MS.gene059692 | MS.gene50651 | 0.825933 | 3.58E-54 | -1.69E-46 |
MS.gene059695 | MS.gene50651 | 0.822035 | 2.94E-53 | -1.69E-46 |
MS.gene05984 | MS.gene50651 | 0.830379 | 3.04E-55 | -1.69E-46 |
MS.gene059894 | MS.gene50651 | 0.853117 | 2.95E-61 | -1.69E-46 |
MS.gene06037 | MS.gene50651 | 0.848983 | 4.33E-60 | -1.69E-46 |
MS.gene060476 | MS.gene50651 | 0.822856 | 1.89E-53 | -1.69E-46 |
MS.gene060495 | MS.gene50651 | 0.809815 | 1.57E-50 | -1.69E-46 |
MS.gene061049 | MS.gene50651 | 0.868435 | 6.54E-66 | -1.69E-46 |
MS.gene061265 | MS.gene50651 | 0.806246 | 9.03E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50651.t1 | MTR_4g072680 | 96.053 | 76 | 3 | 0 | 1 | 76 | 1 | 76 | 1.88e-49 | 153 |
MS.gene50651.t1 | MTR_4g072480 | 96.053 | 76 | 3 | 0 | 1 | 76 | 1 | 76 | 1.98e-49 | 153 |
MS.gene50651.t1 | MTR_4g072460 | 93.421 | 76 | 5 | 0 | 1 | 76 | 1 | 76 | 3.95e-48 | 150 |
MS.gene50651.t1 | MTR_4g072620 | 90.789 | 76 | 7 | 0 | 1 | 76 | 1 | 76 | 2.00e-47 | 148 |
MS.gene50651.t1 | MTR_4g072730 | 86.842 | 76 | 10 | 0 | 1 | 76 | 1 | 76 | 4.10e-45 | 142 |
MS.gene50651.t1 | MTR_4g072570 | 80.263 | 76 | 15 | 0 | 1 | 76 | 1 | 76 | 1.24e-39 | 128 |
MS.gene50651.t1 | MTR_4g072660 | 81.579 | 76 | 9 | 1 | 1 | 76 | 1 | 71 | 2.72e-39 | 127 |
MS.gene50651.t1 | MTR_4g072530 | 78.947 | 76 | 16 | 0 | 1 | 76 | 1 | 76 | 4.95e-38 | 124 |
MS.gene50651.t1 | MTR_4g072500 | 78.947 | 76 | 16 | 0 | 1 | 76 | 1 | 76 | 5.61e-38 | 124 |
MS.gene50651.t1 | MTR_3g084150 | 73.684 | 76 | 20 | 0 | 1 | 76 | 1 | 76 | 1.53e-36 | 120 |
MS.gene50651.t1 | MTR_4g072640 | 73.684 | 76 | 20 | 0 | 1 | 76 | 1 | 76 | 7.70e-36 | 119 |
MS.gene50651.t1 | MTR_8g461410 | 72.368 | 76 | 21 | 0 | 1 | 76 | 1 | 76 | 7.78e-36 | 119 |
MS.gene50651.t1 | MTR_3g084180 | 72.368 | 76 | 21 | 0 | 1 | 76 | 1 | 76 | 8.31e-36 | 119 |
MS.gene50651.t1 | MTR_3g110042 | 73.684 | 76 | 20 | 0 | 1 | 76 | 1 | 76 | 3.26e-35 | 117 |
MS.gene50651.t1 | MTR_4g072310 | 70.130 | 77 | 22 | 1 | 1 | 76 | 1 | 77 | 1.81e-34 | 115 |
MS.gene50651.t1 | MTR_4g072240 | 68.831 | 77 | 23 | 1 | 1 | 76 | 1 | 77 | 2.61e-34 | 115 |
MS.gene50651.t1 | MTR_4g072870 | 68.831 | 77 | 23 | 1 | 1 | 76 | 1 | 77 | 3.25e-34 | 114 |
MS.gene50651.t1 | MTR_4g072230 | 71.429 | 77 | 19 | 2 | 1 | 76 | 1 | 75 | 4.41e-34 | 114 |
MS.gene50651.t1 | MTR_4g072880 | 70.130 | 77 | 22 | 1 | 1 | 76 | 1 | 77 | 1.74e-33 | 113 |
MS.gene50651.t1 | MTR_3g084250 | 67.949 | 78 | 25 | 0 | 1 | 78 | 1 | 78 | 2.34e-33 | 112 |
MS.gene50651.t1 | MTR_4g072220 | 66.234 | 77 | 25 | 1 | 1 | 76 | 1 | 77 | 4.64e-33 | 112 |
MS.gene50651.t1 | MTR_4g072300 | 66.234 | 77 | 25 | 1 | 1 | 76 | 1 | 77 | 4.99e-33 | 112 |
MS.gene50651.t1 | MTR_3g084240 | 67.105 | 76 | 25 | 0 | 1 | 76 | 1 | 76 | 6.12e-33 | 111 |
MS.gene50651.t1 | MTR_4g072370 | 65.385 | 78 | 25 | 1 | 1 | 78 | 1 | 76 | 6.81e-33 | 111 |
MS.gene50651.t1 | MTR_3g117630 | 73.239 | 71 | 19 | 0 | 6 | 76 | 6 | 76 | 6.98e-33 | 111 |
MS.gene50651.t1 | MTR_4g072270 | 68.831 | 77 | 23 | 1 | 1 | 76 | 1 | 77 | 1.12e-32 | 110 |
MS.gene50651.t1 | MTR_4g072490 | 66.667 | 78 | 21 | 1 | 1 | 78 | 1 | 73 | 1.96e-32 | 110 |
MS.gene50651.t1 | MTR_4g072630 | 66.667 | 78 | 22 | 1 | 1 | 78 | 1 | 74 | 2.30e-32 | 110 |
MS.gene50651.t1 | MTR_4g072580 | 67.105 | 76 | 20 | 1 | 1 | 76 | 1 | 71 | 2.56e-32 | 110 |
MS.gene50651.t1 | MTR_3g084170 | 67.105 | 76 | 25 | 0 | 1 | 76 | 1 | 76 | 2.95e-32 | 110 |
MS.gene50651.t1 | MTR_4g072550 | 89.474 | 57 | 6 | 0 | 20 | 76 | 31 | 87 | 3.76e-32 | 110 |
MS.gene50651.t1 | MTR_4g072260 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 3.78e-32 | 109 |
MS.gene50651.t1 | MTR_4g072890 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 4.44e-32 | 109 |
MS.gene50651.t1 | MTR_5g008360 | 80.952 | 63 | 12 | 0 | 13 | 75 | 4 | 66 | 5.41e-32 | 108 |
MS.gene50651.t1 | MTR_4g072860 | 68.831 | 77 | 23 | 1 | 1 | 76 | 1 | 77 | 6.67e-32 | 108 |
MS.gene50651.t1 | MTR_4g072250 | 71.429 | 77 | 20 | 2 | 1 | 76 | 1 | 76 | 9.00e-32 | 108 |
MS.gene50651.t1 | MTR_3g084220 | 67.105 | 76 | 25 | 0 | 1 | 76 | 1 | 76 | 1.11e-31 | 108 |
MS.gene50651.t1 | MTR_4g072740 | 66.667 | 78 | 21 | 1 | 1 | 78 | 1 | 73 | 1.67e-31 | 107 |
MS.gene50651.t1 | MTR_3g084210 | 66.250 | 80 | 27 | 0 | 1 | 80 | 1 | 80 | 2.54e-31 | 107 |
MS.gene50651.t1 | MTR_8g461420 | 67.500 | 80 | 26 | 0 | 1 | 80 | 1 | 80 | 2.60e-31 | 107 |
MS.gene50651.t1 | MTR_3g110038 | 64.474 | 76 | 27 | 0 | 1 | 76 | 1 | 76 | 3.13e-31 | 107 |
MS.gene50651.t1 | MTR_4g072330 | 61.538 | 78 | 28 | 1 | 1 | 78 | 1 | 76 | 5.26e-31 | 106 |
MS.gene50651.t1 | MTR_4g072830 | 62.500 | 80 | 28 | 1 | 1 | 80 | 1 | 78 | 5.56e-31 | 106 |
MS.gene50651.t1 | MTR_4g072600 | 63.750 | 80 | 24 | 1 | 1 | 80 | 1 | 75 | 5.57e-31 | 106 |
MS.gene50651.t1 | MTR_3g084190 | 67.500 | 80 | 26 | 0 | 1 | 80 | 1 | 80 | 6.29e-31 | 106 |
MS.gene50651.t1 | MTR_3g084230 | 67.500 | 80 | 26 | 0 | 1 | 80 | 1 | 80 | 6.57e-31 | 106 |
MS.gene50651.t1 | MTR_4g072610 | 62.963 | 81 | 24 | 1 | 1 | 81 | 1 | 75 | 7.85e-31 | 106 |
MS.gene50651.t1 | MTR_3g110032 | 63.291 | 79 | 28 | 1 | 1 | 78 | 1 | 79 | 9.07e-31 | 106 |
MS.gene50651.t1 | MTR_4g072465 | 62.821 | 78 | 25 | 1 | 1 | 78 | 1 | 74 | 2.39e-30 | 105 |
MS.gene50651.t1 | MTR_3g084160 | 67.500 | 80 | 26 | 0 | 1 | 80 | 1 | 80 | 2.52e-30 | 105 |
MS.gene50651.t1 | MTR_3g084260 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 4.93e-30 | 104 |
MS.gene50651.t1 | MTR_4g072470 | 65.789 | 76 | 21 | 1 | 1 | 76 | 1 | 71 | 4.99e-30 | 103 |
MS.gene50651.t1 | MTR_4g050700 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 3.48e-29 | 102 |
MS.gene50651.t1 | MTR_2g012410 | 64.935 | 77 | 26 | 1 | 1 | 76 | 1 | 77 | 3.48e-29 | 102 |
MS.gene50651.t1 | MTR_4g072750 | 63.415 | 82 | 28 | 1 | 1 | 80 | 1 | 82 | 3.56e-29 | 102 |
MS.gene50651.t1 | MTR_4g072540 | 65.000 | 80 | 24 | 1 | 1 | 80 | 1 | 76 | 3.59e-29 | 102 |
MS.gene50651.t1 | MTR_4g072820 | 67.532 | 77 | 18 | 2 | 1 | 76 | 1 | 71 | 6.61e-29 | 101 |
MS.gene50651.t1 | MTR_5g008350 | 57.317 | 82 | 30 | 1 | 1 | 82 | 1 | 77 | 7.62e-29 | 100 |
MS.gene50651.t1 | MTR_4g072720 | 65.000 | 80 | 24 | 1 | 1 | 80 | 1 | 76 | 1.31e-28 | 100 |
MS.gene50651.t1 | MTR_4g072850 | 66.667 | 78 | 24 | 1 | 1 | 76 | 1 | 78 | 1.88e-28 | 100 |
MS.gene50651.t1 | MTR_3g110045 | 66.667 | 78 | 26 | 0 | 3 | 80 | 62 | 139 | 2.43e-28 | 102 |
MS.gene50651.t1 | MTR_3g084200 | 61.111 | 72 | 28 | 0 | 1 | 72 | 1 | 72 | 6.03e-28 | 99.4 |
MS.gene50651.t1 | MTR_4g072650 | 61.538 | 78 | 24 | 1 | 1 | 78 | 1 | 72 | 1.57e-27 | 97.8 |
MS.gene50651.t1 | MTR_4g072590 | 63.750 | 80 | 24 | 1 | 1 | 80 | 1 | 75 | 2.65e-27 | 97.1 |
MS.gene50651.t1 | MTR_4g072670 | 61.250 | 80 | 27 | 1 | 1 | 80 | 1 | 76 | 3.51e-27 | 97.1 |
MS.gene50651.t1 | MTR_4g072510 | 62.500 | 80 | 26 | 1 | 1 | 80 | 1 | 76 | 8.87e-27 | 95.9 |
MS.gene50651.t1 | MTR_4g072380 | 63.636 | 77 | 22 | 2 | 1 | 76 | 1 | 72 | 1.07e-26 | 95.9 |
MS.gene50651.t1 | MTR_5g008370 | 75.000 | 60 | 15 | 0 | 18 | 77 | 18 | 77 | 1.53e-26 | 97.1 |
MS.gene50651.t1 | MTR_4g072940 | 77.193 | 57 | 13 | 0 | 21 | 77 | 53 | 109 | 1.75e-26 | 96.3 |
MS.gene50651.t1 | MTR_4g072770 | 60.526 | 76 | 20 | 1 | 1 | 76 | 1 | 66 | 1.04e-24 | 90.5 |
MS.gene50651.t1 | MTR_4g072980 | 55.696 | 79 | 29 | 2 | 1 | 78 | 8 | 81 | 7.20e-24 | 88.6 |
MS.gene50651.t1 | MTR_4g072690 | 61.250 | 80 | 26 | 1 | 1 | 80 | 1 | 75 | 8.36e-24 | 88.2 |
MS.gene50651.t1 | MTR_4g072280 | 54.667 | 75 | 33 | 1 | 1 | 74 | 1 | 75 | 9.27e-24 | 88.2 |
MS.gene50651.t1 | MTR_3g117640 | 74.545 | 55 | 13 | 1 | 25 | 78 | 34 | 88 | 6.11e-23 | 86.7 |
MS.gene50651.t1 | MTR_4g072450 | 58.750 | 80 | 28 | 1 | 1 | 80 | 1 | 75 | 1.17e-22 | 85.5 |
MS.gene50651.t1 | MTR_4g072560 | 52.632 | 76 | 35 | 1 | 6 | 80 | 13 | 88 | 1.22e-22 | 85.9 |
MS.gene50651.t1 | MTR_4g072910 | 54.054 | 74 | 33 | 1 | 9 | 81 | 18 | 91 | 1.97e-22 | 85.1 |
MS.gene50651.t1 | MTR_4g072290 | 51.948 | 77 | 22 | 2 | 1 | 76 | 1 | 63 | 7.87e-20 | 78.2 |
MS.gene50651.t1 | MTR_6g077850 | 50.877 | 57 | 28 | 0 | 24 | 80 | 33 | 89 | 1.04e-18 | 75.9 |
MS.gene50651.t1 | MTR_3g117610 | 60.714 | 56 | 21 | 1 | 23 | 78 | 43 | 97 | 1.08e-18 | 75.9 |
MS.gene50651.t1 | MTR_3g113310 | 59.259 | 54 | 21 | 1 | 23 | 76 | 40 | 92 | 2.93e-18 | 74.7 |
MS.gene50651.t1 | MTR_3g110035 | 60.000 | 55 | 22 | 0 | 26 | 80 | 72 | 126 | 3.49e-18 | 75.5 |
MS.gene50651.t1 | MTR_4g072190 | 58.929 | 56 | 22 | 1 | 23 | 78 | 34 | 88 | 1.08e-17 | 73.2 |
MS.gene50651.t1 | MTR_4g072930 | 54.237 | 59 | 23 | 1 | 27 | 81 | 43 | 101 | 2.11e-16 | 70.1 |
MS.gene50651.t1 | MTR_8g076040 | 58.491 | 53 | 21 | 1 | 24 | 76 | 40 | 91 | 1.72e-15 | 67.8 |
MS.gene50651.t1 | MTR_5g021820 | 50.000 | 58 | 28 | 1 | 24 | 81 | 39 | 95 | 2.11e-15 | 67.4 |
MS.gene50651.t1 | MTR_2g043960 | 54.545 | 55 | 24 | 1 | 24 | 78 | 75 | 128 | 4.71e-13 | 62.8 |
MS.gene50651.t1 | MTR_4g124750 | 44.156 | 77 | 40 | 2 | 4 | 78 | 46 | 121 | 4.95e-13 | 62.4 |
MS.gene50651.t1 | MTR_1g024085 | 36.283 | 113 | 58 | 3 | 24 | 135 | 36 | 135 | 1.95e-12 | 60.8 |
MS.gene50651.t1 | MTR_1g009150 | 53.571 | 56 | 25 | 1 | 25 | 80 | 71 | 125 | 3.41e-12 | 60.8 |
MS.gene50651.t1 | MTR_4g005310 | 38.095 | 84 | 41 | 2 | 21 | 103 | 58 | 131 | 7.84e-12 | 59.3 |
MS.gene50651.t1 | MTR_8g461210 | 40.260 | 77 | 45 | 1 | 4 | 80 | 14 | 89 | 8.10e-12 | 58.5 |
MS.gene50651.t1 | MTR_0388s0020 | 44.776 | 67 | 33 | 2 | 15 | 78 | 65 | 130 | 2.89e-11 | 57.8 |
MS.gene50651.t1 | MTR_7g118010 | 53.571 | 56 | 23 | 2 | 25 | 78 | 23 | 77 | 3.53e-11 | 56.6 |
MS.gene50651.t1 | MTR_4g025830 | 50.877 | 57 | 24 | 2 | 25 | 78 | 79 | 134 | 4.50e-11 | 57.4 |
MS.gene50651.t1 | MTR_3g092220 | 43.077 | 65 | 34 | 2 | 16 | 78 | 24 | 87 | 5.27e-11 | 56.2 |
MS.gene50651.t1 | MTR_4g005320 | 46.667 | 60 | 31 | 1 | 25 | 84 | 70 | 128 | 6.23e-11 | 57.0 |
MS.gene50651.t1 | MTR_4g072160 | 34.211 | 114 | 63 | 4 | 16 | 119 | 28 | 139 | 6.41e-11 | 56.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50651.t1 | AT2G21200 | 62.500 | 72 | 25 | 2 | 7 | 76 | 2 | 73 | 8.31e-26 | 93.6 |
MS.gene50651.t1 | AT4G38840 | 60.000 | 85 | 25 | 3 | 1 | 76 | 1 | 85 | 6.11e-25 | 91.7 |
MS.gene50651.t1 | AT4G34800 | 54.321 | 81 | 30 | 2 | 1 | 78 | 1 | 77 | 7.38e-25 | 91.3 |
MS.gene50651.t1 | AT4G34770 | 56.098 | 82 | 34 | 1 | 4 | 83 | 14 | 95 | 1.52e-24 | 90.9 |
MS.gene50651.t1 | AT4G38825 | 56.757 | 74 | 28 | 2 | 7 | 76 | 2 | 75 | 4.98e-24 | 89.0 |
MS.gene50651.t1 | AT2G21210 | 53.086 | 81 | 33 | 2 | 1 | 76 | 1 | 81 | 7.59e-24 | 89.0 |
MS.gene50651.t1 | AT2G21210 | 53.086 | 81 | 33 | 2 | 1 | 76 | 68 | 148 | 3.23e-23 | 89.4 |
MS.gene50651.t1 | AT4G38850 | 57.692 | 78 | 29 | 2 | 7 | 80 | 2 | 79 | 3.61e-23 | 87.0 |
MS.gene50651.t1 | AT5G18020 | 54.545 | 77 | 33 | 2 | 1 | 76 | 1 | 76 | 1.05e-22 | 85.9 |
MS.gene50651.t1 | AT3G03840 | 59.211 | 76 | 26 | 2 | 3 | 76 | 8 | 80 | 1.59e-22 | 85.5 |
MS.gene50651.t1 | AT5G18080 | 55.844 | 77 | 32 | 2 | 1 | 76 | 1 | 76 | 2.38e-22 | 84.7 |
MS.gene50651.t1 | AT4G34810 | 64.407 | 59 | 17 | 1 | 24 | 78 | 47 | 105 | 3.96e-22 | 85.1 |
MS.gene50651.t1 | AT5G18060 | 54.667 | 75 | 29 | 2 | 7 | 76 | 2 | 76 | 4.29e-22 | 84.0 |
MS.gene50651.t1 | AT3G03850 | 61.842 | 76 | 22 | 3 | 3 | 76 | 8 | 78 | 5.24e-22 | 84.0 |
MS.gene50651.t1 | AT4G13790 | 48.193 | 83 | 41 | 1 | 1 | 81 | 1 | 83 | 5.69e-22 | 84.0 |
MS.gene50651.t1 | AT5G18050 | 53.333 | 75 | 30 | 2 | 7 | 76 | 2 | 76 | 1.71e-21 | 82.8 |
MS.gene50651.t1 | AT5G18030 | 54.795 | 73 | 30 | 2 | 7 | 76 | 2 | 74 | 2.07e-21 | 82.4 |
MS.gene50651.t1 | AT3G03820 | 61.111 | 72 | 22 | 2 | 8 | 76 | 13 | 81 | 2.44e-21 | 82.4 |
MS.gene50651.t1 | AT3G03830 | 55.263 | 76 | 25 | 2 | 3 | 75 | 8 | 77 | 1.72e-20 | 80.1 |
MS.gene50651.t1 | AT5G18010 | 51.948 | 77 | 35 | 2 | 1 | 76 | 1 | 76 | 3.49e-20 | 79.3 |
MS.gene50651.t1 | AT4G34790 | 62.500 | 56 | 19 | 1 | 25 | 78 | 39 | 94 | 1.22e-18 | 75.9 |
MS.gene50651.t1 | AT4G38860 | 58.929 | 56 | 23 | 0 | 23 | 78 | 38 | 93 | 2.90e-18 | 74.7 |
MS.gene50651.t1 | AT1G75580 | 60.714 | 56 | 21 | 1 | 23 | 78 | 42 | 96 | 1.55e-17 | 73.2 |
MS.gene50651.t1 | AT2G21220 | 58.929 | 56 | 22 | 1 | 23 | 78 | 38 | 92 | 1.63e-17 | 72.8 |
MS.gene50651.t1 | AT4G34780 | 61.404 | 57 | 19 | 1 | 23 | 76 | 26 | 82 | 4.83e-17 | 71.6 |
MS.gene50651.t1 | AT4G34760 | 59.259 | 54 | 21 | 1 | 23 | 76 | 41 | 93 | 5.52e-17 | 71.6 |
MS.gene50651.t1 | AT1G19830 | 57.143 | 56 | 23 | 1 | 23 | 78 | 46 | 100 | 4.57e-16 | 69.3 |
MS.gene50651.t1 | AT4G36110 | 56.604 | 53 | 22 | 1 | 24 | 76 | 39 | 90 | 1.66e-14 | 65.1 |
MS.gene50651.t1 | AT2G16580 | 50.847 | 59 | 28 | 1 | 23 | 81 | 42 | 99 | 2.10e-14 | 65.1 |
MS.gene50651.t1 | AT2G18010 | 47.143 | 70 | 33 | 2 | 24 | 93 | 47 | 112 | 2.89e-14 | 64.7 |
MS.gene50651.t1 | AT3G43120 | 47.692 | 65 | 33 | 1 | 14 | 78 | 68 | 131 | 1.98e-13 | 63.5 |
MS.gene50651.t1 | AT1G75590 | 35.507 | 138 | 73 | 5 | 4 | 135 | 16 | 143 | 5.54e-13 | 62.4 |
MS.gene50651.t1 | AT5G20810 | 54.545 | 55 | 24 | 1 | 24 | 78 | 78 | 131 | 2.88e-12 | 60.8 |
MS.gene50651.t1 | AT3G20220 | 45.070 | 71 | 33 | 3 | 11 | 80 | 37 | 102 | 2.89e-12 | 59.7 |
MS.gene50651.t1 | AT5G20810 | 51.667 | 60 | 28 | 1 | 17 | 76 | 71 | 129 | 3.13e-12 | 61.2 |
MS.gene50651.t1 | AT1G19840 | 36.283 | 113 | 61 | 3 | 24 | 135 | 40 | 142 | 1.27e-11 | 58.9 |
MS.gene50651.t1 | AT5G66260 | 49.123 | 57 | 28 | 1 | 25 | 81 | 34 | 89 | 1.66e-11 | 57.4 |
MS.gene50651.t1 | AT3G09870 | 47.619 | 63 | 30 | 2 | 24 | 84 | 44 | 105 | 4.14e-11 | 56.6 |
MS.gene50651.t1 | AT5G10990 | 42.466 | 73 | 41 | 1 | 24 | 96 | 40 | 111 | 5.38e-11 | 57.0 |
MS.gene50651.t1 | AT3G12830 | 43.836 | 73 | 39 | 2 | 4 | 76 | 30 | 100 | 6.71e-11 | 56.6 |
Find 28 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCAACAAGTCTTGAAATGA+AGG | 0.342172 | 4.3:+33291185 | None:intergenic |
AGTCAAGCCGAGGAAGAGTT+TGG | 0.367159 | 4.3:-33291164 | MS.gene50651:CDS |
TTACATGGAATTAGCAAAAC+AGG | 0.383422 | 4.3:+33290682 | None:intergenic |
CTCTTAGAATAGAGTTTAAA+CGG | 0.400936 | 4.3:+33291327 | None:intergenic |
GGTTTGTTCAAGTATGATAC+AGG | 0.410295 | 4.3:+33291206 | None:intergenic |
CGTTTAAACTCTATTCTAAG+AGG | 0.413979 | 4.3:-33291326 | MS.gene50651:CDS |
CGTGTATGTTGGAGAGAAAC+TGG | 0.417120 | 4.3:-33291243 | MS.gene50651:CDS |
AAAATCAGTAGAAGTGAGAA+AGG | 0.471464 | 4.3:-33291276 | MS.gene50651:CDS |
AAAATCTATGGGCGTTCCAA+AGG | 0.472091 | 4.3:+33289561 | None:intergenic |
AAATCTATGGGCGTTCCAAA+GGG | 0.529875 | 4.3:+33289562 | None:intergenic |
TACACAGCTAGATATCCCTT+TGG | 0.531737 | 4.3:-33289577 | MS.gene50651:CDS |
ATCATATCCAAACTCTTCCT+CGG | 0.532636 | 4.3:+33291157 | None:intergenic |
GGCTATGTTGCCGTGTATGT+TGG | 0.537170 | 4.3:-33291254 | MS.gene50651:CDS |
GACATCTTCCGTACAAGGAA+TGG | 0.540589 | 4.3:+33291115 | None:intergenic |
AAACTCTATTCTAAGAGGAT+CGG | 0.556160 | 4.3:-33291321 | MS.gene50651:CDS |
GTTTGGATATGATCATCCCA+TGG | 0.570301 | 4.3:-33291147 | MS.gene50651:CDS |
AAATCAGTAGAAGTGAGAAA+GGG | 0.578349 | 4.3:-33291275 | MS.gene50651:CDS |
AGGAATGGTGAGGCCACCCA+TGG | 0.587754 | 4.3:+33291130 | None:intergenic |
CAGTTTCTCTCCAACATACA+CGG | 0.594831 | 4.3:+33291244 | None:intergenic |
GGATATGATCATCCCATGGG+TGG | 0.600402 | 4.3:-33291143 | MS.gene50651:CDS |
AGACTTGTTGAGTCAAGCCG+AGG | 0.633253 | 4.3:-33291174 | MS.gene50651:CDS |
TCTAGCTGTGTACGTAGGAG+AGG | 0.638360 | 4.3:+33289588 | None:intergenic |
TTTGGATATGATCATCCCAT+GGG | 0.641263 | 4.3:-33291146 | MS.gene50651:CDS |
GGAATGGTGAGGCCACCCAT+GGG | 0.648249 | 4.3:+33291131 | None:intergenic |
CTTCCGTACAAGGAATGGTG+AGG | 0.686019 | 4.3:+33291120 | None:intergenic |
GTTTGTTCAAGTATGATACA+GGG | 0.688837 | 4.3:+33291207 | None:intergenic |
GGATATCTAGCTGTGTACGT+AGG | 0.696914 | 4.3:+33289583 | None:intergenic |
ATGTTGGAGAGAAACTGGCG+CGG | 0.774668 | 4.3:-33291238 | MS.gene50651:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTCATATTTATAAATAAG+GGG | - | chr4.3:33290958-33290977 | MS.gene50651:intron | 10.0% |
!! | ATAATTTAGCCAAATTAATT+AGG | - | chr4.3:33290278-33290297 | MS.gene50651:intron | 15.0% |
!!! | AAGAATTTTAATTACTTACA+TGG | + | chr4.3:33290237-33290256 | None:intergenic | 15.0% |
!!! | AGTTTTTCAAATTATTTTGA+AGG | + | chr4.3:33290532-33290551 | None:intergenic | 15.0% |
!! | TATCTCTAATACTAGATAAT+TGG | - | chr4.3:33290685-33290704 | MS.gene50651:intron | 20.0% |
!! | TTTGCTTCAAATATGATATA+GGG | - | chr4.3:33291271-33291290 | MS.gene50651:CDS | 20.0% |
!!! | AACAAATTTGCTACAAAAAT+TGG | - | chr4.3:33291083-33291102 | MS.gene50651:intron | 20.0% |
!!! | ATCTTTGTATTGATGATAAA+AGG | - | chr4.3:33290603-33290622 | MS.gene50651:intron | 20.0% |
!!! | GTTGTTTTGTAAAAAAACAA+TGG | + | chr4.3:33290752-33290771 | None:intergenic | 20.0% |
!!! | TTTGAGACAATTTTCATTAT+AGG | - | chr4.3:33289881-33289900 | MS.gene50651:CDS | 20.0% |
!!! | TTTTGCTTCAAATATGATAT+AGG | - | chr4.3:33291270-33291289 | MS.gene50651:CDS | 20.0% |
!!! | TTTTTTTACAAAACAACAAC+AGG | - | chr4.3:33290755-33290774 | MS.gene50651:intron | 20.0% |
! | AAACTAGATGTTATGAAACA+TGG | - | chr4.3:33290547-33290566 | MS.gene50651:intron | 25.0% |
! | AAAGAACTAACTATTGTAGT+AGG | + | chr4.3:33290126-33290145 | None:intergenic | 25.0% |
! | AATGGAGAAAATTTACTATC+TGG | - | chr4.3:33289942-33289961 | MS.gene50651:intron | 25.0% |
! | ACGAATTTACTTCTAATGTT+TGG | - | chr4.3:33290484-33290503 | MS.gene50651:intron | 25.0% |
! | CATATAATTTCTTCCTTGAA+TGG | - | chr4.3:33289815-33289834 | MS.gene50651:intron | 25.0% |
! | CATATTTATAAATAAGGGGA+AGG | - | chr4.3:33290962-33290981 | MS.gene50651:intron | 25.0% |
! | CTCTTAGAATAGAGTTTAAA+CGG | + | chr4.3:33289577-33289596 | None:intergenic | 25.0% |
! | GTCATTAAACAAGAAAAAAG+AGG | + | chr4.3:33289992-33290011 | None:intergenic | 25.0% |
! | GTTATTTATTCTTCATAAGC+AGG | + | chr4.3:33290081-33290100 | None:intergenic | 25.0% |
! | TATTTAACCAAACTAACCAA+TGG | + | chr4.3:33290337-33290356 | None:intergenic | 25.0% |
! | TCAAGGAAGAAATTATATGT+TGG | + | chr4.3:33289814-33289833 | None:intergenic | 25.0% |
! | TGAGTGAATTATTCTACTAT+AGG | - | chr4.3:33290637-33290656 | MS.gene50651:intron | 25.0% |
! | TTAGCCAAATTAATTAGGTT+CGG | - | chr4.3:33290283-33290302 | MS.gene50651:intron | 25.0% |
! | TTGAATCAACTTCAAACTAT+AGG | + | chr4.3:33290392-33290411 | None:intergenic | 25.0% |
!! | CAAAAGAGAAAATCTTTTGA+AGG | - | chr4.3:33291055-33291074 | MS.gene50651:intron | 25.0% |
!! | GTAAATATTACCCTTTTCAT+GGG | - | chr4.3:33289918-33289937 | MS.gene50651:intron | 25.0% |
!! | TGTAAATATTACCCTTTTCA+TGG | - | chr4.3:33289917-33289936 | MS.gene50651:intron | 25.0% |
!!! | AGTTTCTATTTTTTTGCAAC+AGG | - | chr4.3:33290856-33290875 | MS.gene50651:intron | 25.0% |
!!! | GTTTCTATTTTTTTGCAACA+GGG | - | chr4.3:33290857-33290876 | MS.gene50651:intron | 25.0% |
!!! | TCTTTTGTTGTTATCATACT+TGG | + | chr4.3:33291042-33291061 | None:intergenic | 25.0% |
!!! | TTTCTATTTTTTTGCAACAG+GGG | - | chr4.3:33290858-33290877 | MS.gene50651:intron | 25.0% |
AAAATCAGTAGAAGTGAGAA+AGG | - | chr4.3:33289625-33289644 | MS.gene50651:intron | 30.0% | |
AAATCAGTAGAAGTGAGAAA+GGG | - | chr4.3:33289626-33289645 | MS.gene50651:intron | 30.0% | |
AATTGTAGGTGACAAGTAAA+TGG | - | chr4.3:33290719-33290738 | MS.gene50651:intron | 30.0% | |
ATTTGAGTATGATCATCCAA+TGG | + | chr4.3:33291214-33291233 | None:intergenic | 30.0% | |
CAAATTTCACTAGCTATAGT+TGG | - | chr4.3:33290040-33290059 | MS.gene50651:intron | 30.0% | |
CGTTTAAACTCTATTCTAAG+AGG | - | chr4.3:33289575-33289594 | MS.gene50651:CDS | 30.0% | |
GTTTGTTCAAGTATGATACA+GGG | + | chr4.3:33289697-33289716 | None:intergenic | 30.0% | |
TAAGATTCATAGTCCATTCA+AGG | + | chr4.3:33289831-33289850 | None:intergenic | 30.0% | |
TTACATGGAATTAGCAAAAC+AGG | + | chr4.3:33290222-33290241 | None:intergenic | 30.0% | |
TTTACTTCTAATGTTTGGCA+TGG | - | chr4.3:33290489-33290508 | MS.gene50651:intron | 30.0% | |
TTTGAGTATGATCATCCAAT+GGG | + | chr4.3:33291213-33291232 | None:intergenic | 30.0% | |
! | AAACTCTATTCTAAGAGGAT+CGG | - | chr4.3:33289580-33289599 | MS.gene50651:CDS | 30.0% |
!!! | TTCTATTTTTTTGCAACAGG+GGG | - | chr4.3:33290859-33290878 | MS.gene50651:intron | 30.0% |
AAACTAACCAATGGAAGCAA+AGG | + | chr4.3:33290328-33290347 | None:intergenic | 35.0% | |
AAGAAAACAACTTCTCTGCA+AGG | - | chr4.3:33291174-33291193 | MS.gene50651:CDS | 35.0% | |
ACTCAAATTGTTCCTCACTT+TGG | - | chr4.3:33291226-33291245 | MS.gene50651:CDS | 35.0% | |
ATCATATCCAAACTCTTCCT+CGG | + | chr4.3:33289747-33289766 | None:intergenic | 35.0% | |
CTCAACAAGTCTTGAAATGA+AGG | + | chr4.3:33289719-33289738 | None:intergenic | 35.0% | |
GACTATGAATCTTACACTGT+AGG | - | chr4.3:33289837-33289856 | MS.gene50651:intron | 35.0% | |
TAGGCCGAACCTAATTAATT+TGG | + | chr4.3:33290290-33290309 | None:intergenic | 35.0% | |
TTCTCCATTTCCCATGAAAA+GGG | + | chr4.3:33289931-33289950 | None:intergenic | 35.0% | |
TTTCTCCATTTCCCATGAAA+AGG | + | chr4.3:33289932-33289951 | None:intergenic | 35.0% | |
TTTGGATATGATCATCCCAT+GGG | - | chr4.3:33289755-33289774 | MS.gene50651:intron | 35.0% | |
! | ATTACCCTTTTCATGGGAAA+TGG | - | chr4.3:33289924-33289943 | MS.gene50651:intron | 35.0% |
! | GGTTTGTTCAAGTATGATAC+AGG | + | chr4.3:33289698-33289717 | None:intergenic | 35.0% |
! | TTTGCTTCCATTGGTTAGTT+TGG | - | chr4.3:33290327-33290346 | MS.gene50651:intron | 35.0% |
!!! | CAAAACAGGTTTTGTTGCAT+AGG | + | chr4.3:33290208-33290227 | None:intergenic | 35.0% |
!!! | TCTATTTTTTTGCAACAGGG+GGG | - | chr4.3:33290860-33290879 | MS.gene50651:intron | 35.0% |
AAAGAGCCATAAGATACAGC+AGG | + | chr4.3:33290427-33290446 | None:intergenic | 40.0% | |
AAGAGCCATAAGATACAGCA+GGG | + | chr4.3:33290426-33290445 | None:intergenic | 40.0% | |
CAGTTTCTCTCCAACATACA+CGG | + | chr4.3:33289660-33289679 | None:intergenic | 40.0% | |
GTTATGAAACATGGCATCCA+TGG | - | chr4.3:33290556-33290575 | MS.gene50651:intron | 40.0% | |
GTTGCATAGGAAGATTTAGC+TGG | + | chr4.3:33290195-33290214 | None:intergenic | 40.0% | |
GTTTGGATATGATCATCCCA+TGG | - | chr4.3:33289754-33289773 | MS.gene50651:intron | 40.0% | |
TAATGTTTGGCATGGAGTTC+TGG | - | chr4.3:33290497-33290516 | MS.gene50651:intron | 40.0% | |
TACACAGCTAGATATCCCTT+TGG | - | chr4.3:33291324-33291343 | MS.gene50651:CDS | 40.0% | |
! | AAGGCAGTTTCTGAAGACAT+AGG | + | chr4.3:33290309-33290328 | None:intergenic | 40.0% |
! | TGGCAACTGTCTGAAATTGT+AGG | - | chr4.3:33290705-33290724 | MS.gene50651:CDS | 40.0% |
AACTGCCCTGCTGTATCTTA+TGG | - | chr4.3:33290418-33290437 | MS.gene50651:intron | 45.0% | |
ACAATTGCTGAGCCAAAGTG+AGG | + | chr4.3:33291241-33291260 | None:intergenic | 45.0% | |
ATGGCATCCATGGAAGGAAT+GGG | - | chr4.3:33290566-33290585 | MS.gene50651:intron | 45.0% | |
CGTGTATGTTGGAGAGAAAC+TGG | - | chr4.3:33289658-33289677 | MS.gene50651:intron | 45.0% | |
GAAACTGCCTTTGCTTCCAT+TGG | - | chr4.3:33290318-33290337 | MS.gene50651:intron | 45.0% | |
GACATCTTCCGTACAAGGAA+TGG | + | chr4.3:33289789-33289808 | None:intergenic | 45.0% | |
GAGTATGATCATCCAATGGG+TGG | + | chr4.3:33291210-33291229 | None:intergenic | 45.0% | |
GGATATCTAGCTGTGTACGT+AGG | + | chr4.3:33291321-33291340 | None:intergenic | 45.0% | |
TGAAACATGGCATCCATGGA+AGG | - | chr4.3:33290560-33290579 | MS.gene50651:intron | 45.0% | |
TGGAAGACATCTTCCGTACA+AGG | + | chr4.3:33289794-33289813 | None:intergenic | 45.0% | |
! | CACTTTGGCTCAGCAATTGT+TGG | - | chr4.3:33291241-33291260 | MS.gene50651:CDS | 45.0% |
! | GTTTTCTCCCATTCCTTCCA+TGG | + | chr4.3:33290576-33290595 | None:intergenic | 45.0% |
!!! | ATTTTCATATTTATAAATAA+GGG | - | chr4.3:33290957-33290976 | MS.gene50651:intron | 5.0% |
!!! | TATTTTCATATTTATAAATA+AGG | - | chr4.3:33290956-33290975 | MS.gene50651:intron | 5.0% |
AGTCAAGCCGAGGAAGAGTT+TGG | - | chr4.3:33289737-33289756 | MS.gene50651:intron | 50.0% | |
ATGTTGGAGAGAAACTGGCG+CGG | - | chr4.3:33289663-33289682 | MS.gene50651:intron | 50.0% | |
CATGGCATCCATGGAAGGAA+TGG | - | chr4.3:33290565-33290584 | MS.gene50651:intron | 50.0% | |
CTTCCGTACAAGGAATGGTG+AGG | + | chr4.3:33289784-33289803 | None:intergenic | 50.0% | |
GGAATAGTGAGACCACCCAT+TGG | - | chr4.3:33291195-33291214 | MS.gene50651:CDS | 50.0% | |
GGATATGATCATCCCATGGG+TGG | - | chr4.3:33289758-33289777 | MS.gene50651:intron | 50.0% | |
GGCTATGTTGCCGTGTATGT+TGG | - | chr4.3:33289647-33289666 | MS.gene50651:intron | 50.0% | |
TCTAGCTGTGTACGTAGGAG+AGG | + | chr4.3:33291316-33291335 | None:intergenic | 50.0% | |
TGGCCTCACCATTCCTTGTA+CGG | - | chr4.3:33289778-33289797 | MS.gene50651:intron | 50.0% | |
!! | AGACTTGTTGAGTCAAGCCG+AGG | - | chr4.3:33289727-33289746 | MS.gene50651:intron | 50.0% |
AGGAATGGTGAGGCCACCCA+TGG | + | chr4.3:33289774-33289793 | None:intergenic | 60.0% | |
GGAATGGTGAGGCCACCCAT+GGG | + | chr4.3:33289773-33289792 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 33289566 | 33291357 | 33289566 | ID=MS.gene50651 |
chr4.3 | mRNA | 33289566 | 33291357 | 33289566 | ID=MS.gene50651.t1;Parent=MS.gene50651 |
chr4.3 | exon | 33291129 | 33291357 | 33291129 | ID=MS.gene50651.t1.exon1;Parent=MS.gene50651.t1 |
chr4.3 | CDS | 33291129 | 33291357 | 33291129 | ID=cds.MS.gene50651.t1;Parent=MS.gene50651.t1 |
chr4.3 | exon | 33290686 | 33290727 | 33290686 | ID=MS.gene50651.t1.exon2;Parent=MS.gene50651.t1 |
chr4.3 | CDS | 33290686 | 33290727 | 33290686 | ID=cds.MS.gene50651.t1;Parent=MS.gene50651.t1 |
chr4.3 | exon | 33289847 | 33289917 | 33289847 | ID=MS.gene50651.t1.exon3;Parent=MS.gene50651.t1 |
chr4.3 | CDS | 33289847 | 33289917 | 33289847 | ID=cds.MS.gene50651.t1;Parent=MS.gene50651.t1 |
chr4.3 | exon | 33289566 | 33289631 | 33289566 | ID=MS.gene50651.t1.exon4;Parent=MS.gene50651.t1 |
chr4.3 | CDS | 33289566 | 33289631 | 33289566 | ID=cds.MS.gene50651.t1;Parent=MS.gene50651.t1 |
Gene Sequence |
Protein sequence |