Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066745.t1 | XP_003595781.1 | 79.5 | 674 | 90 | 3 | 1 | 626 | 46 | 719 | 6.40E-158 | 567.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066745.t1 | G7IJ06 | 79.5 | 674 | 90 | 3 | 1 | 626 | 46 | 719 | 4.6e-158 | 567.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene066745 | 0.824201 | 9.18E-54 | -1.69E-46 |
MS.gene049230 | MS.gene066745 | 0.818047 | 2.40E-52 | -1.69E-46 |
MS.gene049378 | MS.gene066745 | 0.848936 | 4.46E-60 | -1.69E-46 |
MS.gene049419 | MS.gene066745 | -0.815893 | 7.32E-52 | -1.69E-46 |
MS.gene050105 | MS.gene066745 | 0.890786 | 7.19E-74 | -1.69E-46 |
MS.gene050226 | MS.gene066745 | 0.813616 | 2.34E-51 | -1.69E-46 |
MS.gene050227 | MS.gene066745 | 0.806457 | 8.15E-50 | -1.69E-46 |
MS.gene050228 | MS.gene066745 | 0.817889 | 2.61E-52 | -1.69E-46 |
MS.gene050442 | MS.gene066745 | 0.834226 | 3.39E-56 | -1.69E-46 |
MS.gene050605 | MS.gene066745 | 0.818649 | 1.76E-52 | -1.69E-46 |
MS.gene050623 | MS.gene066745 | -0.837491 | 5.04E-57 | -1.69E-46 |
MS.gene050654 | MS.gene066745 | 0.827341 | 1.65E-54 | -1.69E-46 |
MS.gene050680 | MS.gene066745 | 0.808154 | 3.56E-50 | -1.69E-46 |
MS.gene050750 | MS.gene066745 | 0.82182 | 3.30E-53 | -1.69E-46 |
MS.gene050762 | MS.gene066745 | 0.808473 | 3.04E-50 | -1.69E-46 |
MS.gene050763 | MS.gene066745 | 0.809308 | 2.02E-50 | -1.69E-46 |
MS.gene050826 | MS.gene066745 | 0.826524 | 2.59E-54 | -1.69E-46 |
MS.gene050941 | MS.gene066745 | 0.806864 | 6.69E-50 | -1.69E-46 |
MS.gene050953 | MS.gene066745 | 0.828175 | 1.04E-54 | -1.69E-46 |
MS.gene051122 | MS.gene066745 | 0.85003 | 2.21E-60 | -1.69E-46 |
MS.gene051368 | MS.gene066745 | 0.846804 | 1.73E-59 | -1.69E-46 |
MS.gene051452 | MS.gene066745 | 0.809122 | 2.21E-50 | -1.69E-46 |
MS.gene051535 | MS.gene066745 | 0.808713 | 2.71E-50 | -1.69E-46 |
MS.gene051924 | MS.gene066745 | -0.831122 | 2.00E-55 | -1.69E-46 |
MS.gene051926 | MS.gene066745 | -0.807419 | 5.10E-50 | -1.69E-46 |
MS.gene051983 | MS.gene066745 | 0.800036 | 1.74E-48 | -1.69E-46 |
MS.gene052012 | MS.gene066745 | 0.81397 | 1.95E-51 | -1.69E-46 |
MS.gene05216 | MS.gene066745 | 0.808498 | 3.01E-50 | -1.69E-46 |
MS.gene052333 | MS.gene066745 | 0.811401 | 7.13E-51 | -1.69E-46 |
MS.gene052426 | MS.gene066745 | 0.827244 | 1.74E-54 | -1.69E-46 |
MS.gene052674 | MS.gene066745 | 0.843147 | 1.68E-58 | -1.69E-46 |
MS.gene052675 | MS.gene066745 | 0.838327 | 3.07E-57 | -1.69E-46 |
MS.gene052677 | MS.gene066745 | 0.840905 | 6.56E-58 | -1.69E-46 |
MS.gene052954 | MS.gene066745 | 0.840702 | 7.42E-58 | -1.69E-46 |
MS.gene053008 | MS.gene066745 | 0.847754 | 9.46E-60 | -1.69E-46 |
MS.gene053166 | MS.gene066745 | 0.822392 | 2.43E-53 | -1.69E-46 |
MS.gene05415 | MS.gene066745 | 0.80133 | 9.47E-49 | -1.69E-46 |
MS.gene054291 | MS.gene066745 | -0.8034 | 3.55E-49 | -1.69E-46 |
MS.gene054379 | MS.gene066745 | 0.812221 | 4.73E-51 | -1.69E-46 |
MS.gene054405 | MS.gene066745 | 0.818279 | 2.13E-52 | -1.69E-46 |
MS.gene054479 | MS.gene066745 | 0.85946 | 4.07E-63 | -1.69E-46 |
MS.gene054657 | MS.gene066745 | 0.841412 | 4.83E-58 | -1.69E-46 |
MS.gene054658 | MS.gene066745 | 0.812164 | 4.87E-51 | -1.69E-46 |
MS.gene054994 | MS.gene066745 | 0.805383 | 1.37E-49 | -1.69E-46 |
MS.gene05510 | MS.gene066745 | 0.844651 | 6.63E-59 | -1.69E-46 |
MS.gene05517 | MS.gene066745 | 0.811637 | 6.34E-51 | -1.69E-46 |
MS.gene055222 | MS.gene066745 | 0.800475 | 1.42E-48 | -1.69E-46 |
MS.gene055623 | MS.gene066745 | 0.815997 | 6.94E-52 | -1.69E-46 |
MS.gene055701 | MS.gene066745 | 0.881745 | 1.86E-70 | -1.69E-46 |
MS.gene055818 | MS.gene066745 | 0.809183 | 2.15E-50 | -1.69E-46 |
MS.gene055926 | MS.gene066745 | 0.816616 | 5.04E-52 | -1.69E-46 |
MS.gene056045 | MS.gene066745 | 0.810585 | 1.07E-50 | -1.69E-46 |
MS.gene056480 | MS.gene066745 | 0.84901 | 4.25E-60 | -1.69E-46 |
MS.gene056506 | MS.gene066745 | 0.845691 | 3.47E-59 | -1.69E-46 |
MS.gene056776 | MS.gene066745 | 0.810079 | 1.38E-50 | -1.69E-46 |
MS.gene056779 | MS.gene066745 | 0.808826 | 2.56E-50 | -1.69E-46 |
MS.gene057156 | MS.gene066745 | -0.834986 | 2.18E-56 | -1.69E-46 |
MS.gene057208 | MS.gene066745 | 0.815831 | 7.56E-52 | -1.69E-46 |
MS.gene05761 | MS.gene066745 | 0.828807 | 7.32E-55 | -1.69E-46 |
MS.gene058081 | MS.gene066745 | 0.818002 | 2.46E-52 | -1.69E-46 |
MS.gene058126 | MS.gene066745 | 0.804617 | 1.98E-49 | -1.69E-46 |
MS.gene058146 | MS.gene066745 | 0.824974 | 6.04E-54 | -1.69E-46 |
MS.gene058223 | MS.gene066745 | -0.847756 | 9.46E-60 | -1.69E-46 |
MS.gene058399 | MS.gene066745 | 0.815677 | 8.18E-52 | -1.69E-46 |
MS.gene058435 | MS.gene066745 | 0.807906 | 4.02E-50 | -1.69E-46 |
MS.gene058548 | MS.gene066745 | 0.827257 | 1.73E-54 | -1.69E-46 |
MS.gene058549 | MS.gene066745 | 0.803125 | 4.05E-49 | -1.69E-46 |
MS.gene058595 | MS.gene066745 | 0.854441 | 1.23E-61 | -1.69E-46 |
MS.gene058979 | MS.gene066745 | 0.800593 | 1.34E-48 | -1.69E-46 |
MS.gene059161 | MS.gene066745 | 0.856183 | 3.82E-62 | -1.69E-46 |
MS.gene059609 | MS.gene066745 | 0.831632 | 1.50E-55 | -1.69E-46 |
MS.gene05979 | MS.gene066745 | 0.830679 | 2.56E-55 | -1.69E-46 |
MS.gene059952 | MS.gene066745 | 0.800581 | 1.35E-48 | -1.69E-46 |
MS.gene060011 | MS.gene066745 | 0.826654 | 2.41E-54 | -1.69E-46 |
MS.gene060296 | MS.gene066745 | 0.833744 | 4.47E-56 | -1.69E-46 |
MS.gene060322 | MS.gene066745 | 0.827015 | 1.98E-54 | -1.69E-46 |
MS.gene060683 | MS.gene066745 | 0.848753 | 5.01E-60 | -1.69E-46 |
MS.gene060685 | MS.gene066745 | 0.848009 | 8.05E-60 | -1.69E-46 |
MS.gene060802 | MS.gene066745 | 0.870557 | 1.33E-66 | -1.69E-46 |
MS.gene060803 | MS.gene066745 | 0.863751 | 1.99E-64 | -1.69E-46 |
MS.gene060850 | MS.gene066745 | 0.827224 | 1.76E-54 | -1.69E-46 |
MS.gene060851 | MS.gene066745 | 0.834519 | 2.86E-56 | -1.69E-46 |
MS.gene060852 | MS.gene066745 | 0.83416 | 3.52E-56 | -1.69E-46 |
MS.gene060879 | MS.gene066745 | 0.804706 | 1.90E-49 | -1.69E-46 |
MS.gene060932 | MS.gene066745 | 0.805396 | 1.36E-49 | -1.69E-46 |
MS.gene060998 | MS.gene066745 | 0.834016 | 3.82E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066745.t1 | MTR_2g060760 | 88.872 | 674 | 27 | 3 | 1 | 626 | 46 | 719 | 0.0 | 1053 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066745.t1 | AT2G44430 | 33.532 | 671 | 300 | 28 | 2 | 626 | 76 | 646 | 1.93e-53 | 194 |
MS.gene066745.t1 | AT3G60110 | 31.029 | 651 | 336 | 24 | 2 | 626 | 78 | 641 | 3.75e-50 | 184 |
MS.gene066745.t1 | AT3G57980 | 30.428 | 677 | 344 | 31 | 6 | 626 | 45 | 650 | 1.73e-40 | 157 |
MS.gene066745.t1 | AT3G57980 | 30.383 | 678 | 345 | 31 | 6 | 626 | 45 | 652 | 5.69e-40 | 155 |
MS.gene066745.t1 | AT2G42150 | 30.088 | 565 | 301 | 22 | 8 | 539 | 49 | 552 | 1.08e-38 | 151 |
MS.gene066745.t1 | AT1G61215 | 23.782 | 349 | 210 | 11 | 19 | 350 | 55 | 364 | 2.50e-11 | 66.6 |
MS.gene066745.t1 | AT1G61215 | 22.951 | 366 | 226 | 11 | 2 | 350 | 19 | 345 | 4.27e-11 | 65.9 |
Find 194 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGCTTTGTTCTTCAATTT+TGG | 0.021371 | 2.2:-28351323 | None:intergenic |
TGCTGCGCAGCCCGCAATTC+AGG | 0.232135 | 2.2:-28350858 | None:intergenic |
TTATGCTTGGAGAGAGAATT+TGG | 0.234903 | 2.2:-28350987 | None:intergenic |
TTCCTTCTTGTCATTGATGA+TGG | 0.282552 | 2.2:-28351096 | None:intergenic |
CGGCGGAGGAAGGAGGTTTC+CGG | 0.312400 | 2.2:+28341002 | MS.gene066745:CDS |
TCGTCGTTCACCTGAATTGC+GGG | 0.313585 | 2.2:+28350848 | MS.gene066745:CDS |
CTGAGGAGTGGTAGTGGTGG+TGG | 0.331369 | 2.2:+28351425 | MS.gene066745:CDS |
TCCGATTCTTCACCCGTTGC+TGG | 0.331509 | 2.2:-28340618 | None:intergenic |
CTCTTGGACCCTCAGTTGTA+TGG | 0.343899 | 2.2:-28350748 | None:intergenic |
AGAGGGTGGTTTCTTATTGC+TGG | 0.347250 | 2.2:-28351252 | None:intergenic |
AGTGGTAGTGGTGGTGGAGG+AGG | 0.353098 | 2.2:+28351431 | MS.gene066745:CDS |
AGAGAATTTGGTCTGGATAA+TGG | 0.359430 | 2.2:-28350975 | None:intergenic |
TGGCTAAAGGTGGTGGTAGA+AGG | 0.361071 | 2.2:-28351056 | None:intergenic |
CAGAAGAAAATAGTGAATAA+TGG | 0.371044 | 2.2:+28351506 | MS.gene066745:CDS |
CGAGGAGGACGCAGCGGCGG+AGG | 0.373416 | 2.2:+28340988 | MS.gene066745:CDS |
TCCCGGCGACTTACGGTTGC+CGG | 0.373953 | 2.2:+28340506 | MS.gene066745:CDS |
GAACCAGATCTGGCGGTTCC+CGG | 0.374401 | 2.2:+28340489 | MS.gene066745:CDS |
TCTTCATCTGTCTCCGAACT+TGG | 0.375453 | 2.2:-28351152 | None:intergenic |
GCTCAGCAACACGTTGTTTA+CGG | 0.375475 | 2.2:-28340231 | None:intergenic |
TCCTTCTTGTCATTGATGAT+GGG | 0.378342 | 2.2:-28351095 | None:intergenic |
TCTAACTCCACTCCTAAAAC+AGG | 0.378746 | 2.2:+28351272 | MS.gene066745:CDS |
CTCCGTCTTTGCGTCTTCAC+CGG | 0.379418 | 2.2:-28341021 | None:intergenic |
ATGAATCGGTACCGGATATT+CGG | 0.380430 | 2.2:+28340556 | MS.gene066745:CDS |
GCGGGACGTCGTCTTGATAT+CGG | 0.388902 | 2.2:-28340135 | None:intergenic |
GGTCGGAGGAGGGAGGGACG+AGG | 0.389910 | 2.2:+28340925 | MS.gene066745:CDS |
AGGAGTGGTAGTGGTGGTGG+AGG | 0.392175 | 2.2:+28351428 | MS.gene066745:CDS |
GATGGAGGAGGGTCAGGTTC+AGG | 0.396468 | 2.2:+28351569 | MS.gene066745:CDS |
AGGAAGTAGTGGAAGCAGTA+AGG | 0.404761 | 2.2:+28351451 | MS.gene066745:CDS |
TGGGTTTGTGATCACCCTTT+TGG | 0.405811 | 2.2:-28351076 | None:intergenic |
TGGCGGTTCCCGGCGACTTA+CGG | 0.409416 | 2.2:+28340499 | MS.gene066745:CDS |
GGTCTGGATAATGGTGTGTT+TGG | 0.413553 | 2.2:-28350966 | None:intergenic |
AAAATAGTGAATAATGGAAA+AGG | 0.414108 | 2.2:+28351512 | MS.gene066745:CDS |
TCCACCTTCCTTTCCTCACT+CGG | 0.419312 | 2.2:-28340885 | None:intergenic |
GGAAGCAGTAAGGGTGGTGG+TGG | 0.419982 | 2.2:+28351461 | MS.gene066745:CDS |
AAATAGTGAATAATGGAAAA+GGG | 0.420047 | 2.2:+28351513 | MS.gene066745:CDS |
GAGGTGCTGAGGAGTGGTAG+TGG | 0.422126 | 2.2:+28351419 | MS.gene066745:CDS |
AGCAGTAAGGGTGGTGGTGG+AGG | 0.424109 | 2.2:+28351464 | MS.gene066745:CDS |
CTGGATAATGGTGTGTTTGG+AGG | 0.430275 | 2.2:-28350963 | None:intergenic |
CGTTTGCGGCAAACTAATAT+AGG | 0.436236 | 2.2:-28351014 | None:intergenic |
TCGCCGGGAACCGCCAGATC+TGG | 0.441577 | 2.2:-28340492 | None:intergenic |
CACCGTTCTGCTGTGGCGGC+GGG | 0.443560 | 2.2:-28340153 | None:intergenic |
TGTGAAACGGCACGTGGACT+TGG | 0.443952 | 2.2:+28350722 | MS.gene066745:CDS |
TGGATAATGGTGTGTTTGGA+GGG | 0.444053 | 2.2:-28350962 | None:intergenic |
TACCACCACCTTTAGCCAAA+AGG | 0.445192 | 2.2:+28351061 | MS.gene066745:CDS |
CAATGCATCAAACCTCGAAC+CGG | 0.450475 | 2.2:-28340676 | None:intergenic |
GTGGTGGTAGAAGGTTTGAC+TGG | 0.452913 | 2.2:-28351047 | None:intergenic |
TCATCGAGCCGCCGAATATC+CGG | 0.453714 | 2.2:-28340567 | None:intergenic |
CAAGAGGGTCACTATTCCTC+AGG | 0.458008 | 2.2:+28350765 | MS.gene066745:CDS |
AGTAAGGGTGGTGGTGGAGG+TGG | 0.458460 | 2.2:+28351467 | MS.gene066745:CDS |
AGAAGAAACAGAACCAGATC+TGG | 0.458716 | 2.2:+28340479 | MS.gene066745:CDS |
CTGGGATTGAACTACGTTTG+CGG | 0.459098 | 2.2:-28351028 | None:intergenic |
ACCAGCAACGGGTGAAGAAT+CGG | 0.462254 | 2.2:+28340617 | MS.gene066745:CDS |
GGAAGTAGTGGAAGCAGTAA+GGG | 0.463770 | 2.2:+28351452 | MS.gene066745:CDS |
GAGGACGCAGCGGCGGAGGA+AGG | 0.465986 | 2.2:+28340992 | MS.gene066745:CDS |
TATAACGATGGAGGAGGGTC+AGG | 0.468224 | 2.2:+28351563 | MS.gene066745:CDS |
CTACTTCTAGCTCCAGTGAC+AGG | 0.468988 | 2.2:-28351200 | None:intergenic |
AATAATGGAAAAGGGGAGAA+AGG | 0.470625 | 2.2:+28351521 | MS.gene066745:CDS |
ACCAACCTTAAAACCAAGTT+CGG | 0.470995 | 2.2:+28351139 | MS.gene066745:CDS |
CGGTGGAGATATGGATGAAT+CGG | 0.472739 | 2.2:+28340542 | MS.gene066745:CDS |
GCCAAGGAAAAGCCTGTCAC+TGG | 0.474414 | 2.2:+28351188 | MS.gene066745:CDS |
ACCACCACCTTTAGCCAAAA+GGG | 0.477578 | 2.2:+28351062 | MS.gene066745:CDS |
TCACCGTTCTGCTGTGGCGG+CGG | 0.481581 | 2.2:-28340154 | None:intergenic |
AACCGGGAGGAAAAGAAAAT+CGG | 0.483363 | 2.2:+28340791 | MS.gene066745:intron |
AGGGTCCTCGGCAAACAAAC+CGG | 0.484224 | 2.2:+28351292 | MS.gene066745:CDS |
CTCCGGCAACCGTAAGTCGC+CGG | 0.485535 | 2.2:-28340508 | None:intergenic |
GGTGGTGGAGGAGGAAGTAG+TGG | 0.488897 | 2.2:+28351440 | MS.gene066745:CDS |
GTGGTGTGCGGTGGCGAGGA+GGG | 0.489813 | 2.2:-28340083 | None:intergenic |
GATAAGTTGTTACCAGCAAC+GGG | 0.491689 | 2.2:+28340606 | MS.gene066745:CDS |
TTAGGAGTGGAGTTAGAGGG+TGG | 0.496127 | 2.2:-28351266 | None:intergenic |
TCCGGCAACCGTAAGTCGCC+GGG | 0.498388 | 2.2:-28340507 | None:intergenic |
GTCGGTGACTCGGTCGGAGG+AGG | 0.499817 | 2.2:+28340914 | MS.gene066745:CDS |
CACTCCTAAAACAGGGTCCT+CGG | 0.507185 | 2.2:+28351280 | MS.gene066745:CDS |
AGCAACTCGAAGAGGAATGT+TGG | 0.507500 | 2.2:+28351617 | MS.gene066745:CDS |
CTTGGAGAGAGAATTTGGTC+TGG | 0.508801 | 2.2:-28350982 | None:intergenic |
CGAGAAAGCCAAAGAAAATG+AGG | 0.509814 | 2.2:+28340452 | MS.gene066745:CDS |
AAGGGAAAGAAAGAGCTTCA+AGG | 0.510393 | 2.2:+28351540 | MS.gene066745:CDS |
GTGCTGAGGAGTGGTAGTGG+TGG | 0.511659 | 2.2:+28351422 | MS.gene066745:CDS |
AAGAAGAACAACGGTGCCGC+TGG | 0.514978 | 2.2:+28351362 | MS.gene066745:CDS |
AGTGGTGTGCGGTGGCGAGG+AGG | 0.515333 | 2.2:-28340084 | None:intergenic |
GGTCAGGTTCAGGAGATAAG+AGG | 0.515803 | 2.2:+28351579 | MS.gene066745:CDS |
GTTAATGAGTCAAACTCAAC+CGG | 0.516158 | 2.2:+28340657 | MS.gene066745:CDS |
AAGATTCCGATCACGTTCCA+TGG | 0.516356 | 2.2:+28340197 | MS.gene066745:CDS |
AAGGAAGGTGGAGGATGAGT+CGG | 0.517097 | 2.2:+28340896 | MS.gene066745:CDS |
AGAACCGTTGGTTTGCGTGT+TGG | 0.518675 | 2.2:+28341070 | MS.gene066745:CDS |
GAATGGAGACGTCGCTGCGT+TGG | 0.520177 | 2.2:-28340267 | None:intergenic |
TGATAGTGTTGGATTGTGCT+TGG | 0.520415 | 2.2:-28350920 | None:intergenic |
GGCGAGGAGGGAAGTGCGGT+TGG | 0.521102 | 2.2:-28340071 | None:intergenic |
GTTGGTTTCACATCAGAGAA+AGG | 0.523554 | 2.2:-28351122 | None:intergenic |
AGTAGTGGAAGCAGTAAGGG+TGG | 0.528511 | 2.2:+28351455 | MS.gene066745:CDS |
TCCACGCTTTGTACTAGCTA+CGG | 0.531807 | 2.2:-28351666 | None:intergenic |
GGAGAATGAGGACGTGGCGG+TGG | 0.532383 | 2.2:+28341040 | MS.gene066745:CDS |
CTGAGGAATAGTGACCCTCT+TGG | 0.532787 | 2.2:-28350764 | None:intergenic |
TGATAAGTTGTTACCAGCAA+CGG | 0.533007 | 2.2:+28340605 | MS.gene066745:CDS |
CTTGATGAGATGAAAACCTT+CGG | 0.533167 | 2.2:+28350897 | MS.gene066745:CDS |
GTGACTCGGTCGGAGGAGGG+AGG | 0.534084 | 2.2:+28340918 | MS.gene066745:CDS |
TCGGTGACTCGGTCGGAGGA+GGG | 0.536765 | 2.2:+28340915 | MS.gene066745:CDS |
AAATTGAAGAACAAAGCAGA+GGG | 0.540990 | 2.2:+28351326 | MS.gene066745:CDS |
ATCGGAATCTTCAGAGGTGG+CGG | 0.541241 | 2.2:-28340185 | None:intergenic |
TAGCTAGTACAAAGCGTGGA+AGG | 0.541332 | 2.2:+28351669 | MS.gene066745:CDS |
CGCAGTGGTGTGCGGTGGCG+AGG | 0.541442 | 2.2:-28340087 | None:intergenic |
CTCGGCCGGTTTGTTTGCCG+AGG | 0.543195 | 2.2:-28351297 | None:intergenic |
GCTCTTCTGTGTGATAGTGT+TGG | 0.545020 | 2.2:-28350931 | None:intergenic |
TATTGCTGGCGTTGCTGCTG+AGG | 0.545133 | 2.2:-28351238 | None:intergenic |
ATCGGACCGGGATAATCAAT+CGG | 0.546833 | 2.2:+28340635 | MS.gene066745:CDS |
AGACGCAAAGACGGAGAATG+AGG | 0.547884 | 2.2:+28341028 | MS.gene066745:CDS |
AGTCAAACTCAACCGGTTCG+AGG | 0.548246 | 2.2:+28340664 | MS.gene066745:CDS |
ATAATGGAAAAGGGGAGAAA+GGG | 0.549271 | 2.2:+28351522 | MS.gene066745:CDS |
TAATATAGGAGGTTTATGCT+TGG | 0.549559 | 2.2:-28351000 | None:intergenic |
AGACGAGGAGGACGCAGCGG+CGG | 0.550143 | 2.2:+28340985 | MS.gene066745:CDS |
AATAGTGAATAATGGAAAAG+GGG | 0.551013 | 2.2:+28351514 | MS.gene066745:CDS |
CGATTCATCCATATCTCCAC+CGG | 0.553804 | 2.2:-28340541 | None:intergenic |
CTCGTCGTTCACCTGAATTG+CGG | 0.556541 | 2.2:+28350847 | MS.gene066745:CDS |
ACCCATCATCAATGACAAGA+AGG | 0.556669 | 2.2:+28351094 | MS.gene066745:CDS |
AGTGGAAGCAGTAAGGGTGG+TGG | 0.557192 | 2.2:+28351458 | MS.gene066745:CDS |
ATCAAGCCATGGAACGTGAT+CGG | 0.558315 | 2.2:-28340203 | None:intergenic |
TGACTCGGTCGGAGGAGGGA+GGG | 0.560328 | 2.2:+28340919 | MS.gene066745:CDS |
TCAAGGTATAACGATGGAGG+AGG | 0.564967 | 2.2:+28351557 | MS.gene066745:CDS |
AAGTTCGGAGACAGATGAAG+AGG | 0.565785 | 2.2:+28351154 | MS.gene066745:CDS |
AGATGAAGAGGAGCCTCCTA+AGG | 0.566505 | 2.2:+28351166 | MS.gene066745:CDS |
CAACGGGTGAAGAATCGGAC+CGG | 0.569525 | 2.2:+28340622 | MS.gene066745:CDS |
TGAAGAGAGTAACGAGGTCA+AGG | 0.572106 | 2.2:-28350803 | None:intergenic |
AGCTAGTACAAAGCGTGGAA+GGG | 0.576027 | 2.2:+28351670 | MS.gene066745:CDS |
GACGCAGCGGCGGAGGAAGG+AGG | 0.576199 | 2.2:+28340995 | MS.gene066745:CDS |
TTACGGAGTTTATCAAGCCA+TGG | 0.578317 | 2.2:-28340214 | None:intergenic |
GAGTGAGGAAAGGAAGGTGG+AGG | 0.578912 | 2.2:+28340887 | MS.gene066745:CDS |
TTGCGGCAAACTAATATAGG+AGG | 0.580492 | 2.2:-28351011 | None:intergenic |
GGAATCTTCAGAGGTGGCGG+CGG | 0.582736 | 2.2:-28340182 | None:intergenic |
GGTGGTGAAATCAGAACCGT+TGG | 0.585788 | 2.2:+28341058 | MS.gene066745:CDS |
ACGTCACCGTTCTGCTGTGG+CGG | 0.586498 | 2.2:-28340157 | None:intergenic |
GTTGGATTGTGCTTGGCCGA+AGG | 0.589323 | 2.2:-28350913 | None:intergenic |
CGGTGCCTCCGAGTGAGGAA+AGG | 0.590332 | 2.2:+28340877 | MS.gene066745:CDS |
AGATATGGATGAATCGGTAC+CGG | 0.590431 | 2.2:+28340548 | MS.gene066745:CDS |
TGGTGGTAGAAGGTTTGACT+GGG | 0.593448 | 2.2:-28351046 | None:intergenic |
TGGAGGATGAGTCGGTGACT+CGG | 0.593698 | 2.2:+28340904 | MS.gene066745:CDS |
GGTACGTGACTGAACCTCCA+TGG | 0.597587 | 2.2:-28340050 | None:intergenic |
TTCCGGTGAAGACGCAAAGA+CGG | 0.597868 | 2.2:+28341019 | MS.gene066745:CDS |
TCATCAATGACAAGAAGGAA+AGG | 0.597938 | 2.2:+28351099 | MS.gene066745:CDS |
TGACTCGGTGCCTCCGAGTG+AGG | 0.597990 | 2.2:+28340872 | MS.gene066745:CDS |
GAGGAAAAGAAAATCGGTTG+AGG | 0.601160 | 2.2:+28340797 | MS.gene066745:intron |
ACCGTAGCTAGTACAAAGCG+TGG | 0.602506 | 2.2:+28351665 | MS.gene066745:CDS |
GTCGGAGGAGGGAGGGACGA+GGG | 0.604049 | 2.2:+28340926 | MS.gene066745:CDS |
ATCTCCAACACGCAAACCAA+CGG | 0.605003 | 2.2:-28341074 | None:intergenic |
GCCTCCGAGTGAGGAAAGGA+AGG | 0.605677 | 2.2:+28340881 | MS.gene066745:CDS |
GTTGAGGAAGAATCGAATAA+CGG | 0.610392 | 2.2:+28340813 | MS.gene066745:CDS |
CGTCGAGTTTGTCGAAGACG+AGG | 0.614539 | 2.2:+28340970 | MS.gene066745:CDS |
ATTGAAGAACAAAGCAGAGG+GGG | 0.614576 | 2.2:+28351328 | MS.gene066745:CDS |
TAAAGCTGTTACGTGTGACT+CGG | 0.614603 | 2.2:+28340857 | MS.gene066745:CDS |
GGATGAGTCGGTGACTCGGT+CGG | 0.614727 | 2.2:+28340908 | MS.gene066745:CDS |
CATTAACCGATTGATTATCC+CGG | 0.614804 | 2.2:-28340641 | None:intergenic |
CTTGGAAACCATACAACTGA+GGG | 0.617776 | 2.2:+28350740 | MS.gene066745:CDS |
CGGTGGCGAGGAGGGAAGTG+CGG | 0.618822 | 2.2:-28340075 | None:intergenic |
AGAGGAGCCTCCTAAGGCCA+AGG | 0.619461 | 2.2:+28351172 | MS.gene066745:CDS |
ATGAATCGGTGGAGGTGCTG+AGG | 0.620396 | 2.2:+28351408 | MS.gene066745:CDS |
GAGACGTCACCGTTCTGCTG+TGG | 0.626958 | 2.2:-28340160 | None:intergenic |
TCCGAGTGAGGAAAGGAAGG+TGG | 0.627569 | 2.2:+28340884 | MS.gene066745:CDS |
TTGTTCGCAGTGGTGTGCGG+TGG | 0.629385 | 2.2:-28340092 | None:intergenic |
TCATCTCATCAAGGATGAGG+CGG | 0.630133 | 2.2:-28350887 | None:intergenic |
AACGGGTGAAGAATCGGACC+GGG | 0.631167 | 2.2:+28340623 | MS.gene066745:CDS |
ACCTTCCTTTCCTCACTCGG+AGG | 0.638244 | 2.2:-28340882 | None:intergenic |
GTCCCGCCGCCACAGCAGAA+CGG | 0.640917 | 2.2:+28340151 | MS.gene066745:CDS |
GGAAGGGAAAGTAGTGCAAG+TGG | 0.645130 | 2.2:+28351686 | MS.gene066745:CDS |
ATATTGAGAGCAACTCGAAG+AGG | 0.645471 | 2.2:+28351609 | MS.gene066745:CDS |
AGGGACGAGGGAGAGCAGCG+AGG | 0.649215 | 2.2:+28340938 | MS.gene066745:CDS |
AAAATTGAAGAACAAAGCAG+AGG | 0.652415 | 2.2:+28351325 | MS.gene066745:CDS |
AAATACTGTGAAACGGCACG+TGG | 0.652877 | 2.2:+28350716 | MS.gene066745:CDS |
AAGAGGGTCACTATTCCTCA+GGG | 0.657747 | 2.2:+28350766 | MS.gene066745:CDS |
CAAGGTATAACGATGGAGGA+GGG | 0.659847 | 2.2:+28351558 | MS.gene066745:CDS |
AAAGACGGAGAATGAGGACG+TGG | 0.662450 | 2.2:+28341034 | MS.gene066745:CDS |
TCGGTGGAGGTGCTGAGGAG+TGG | 0.663383 | 2.2:+28351413 | MS.gene066745:CDS |
AACGTGATCGGAATCTTCAG+AGG | 0.663851 | 2.2:-28340191 | None:intergenic |
GCTTCAAGGTATAACGATGG+AGG | 0.665255 | 2.2:+28351554 | MS.gene066745:CDS |
AGAAACAGAACCAGATCTGG+CGG | 0.666736 | 2.2:+28340482 | MS.gene066745:CDS |
GTGATCGGAATCTTCAGAGG+TGG | 0.669707 | 2.2:-28340188 | None:intergenic |
AATCGGTACCGGATATTCGG+CGG | 0.670245 | 2.2:+28340559 | MS.gene066745:CDS |
CGAAGACGAGGAGGACGCAG+CGG | 0.673366 | 2.2:+28340982 | MS.gene066745:CDS |
CTAACTCCACTCCTAAAACA+GGG | 0.675031 | 2.2:+28351273 | MS.gene066745:CDS |
AGAGCTTCAAGGTATAACGA+TGG | 0.675479 | 2.2:+28351551 | MS.gene066745:CDS |
GAAGAATGTGTTTGTCCCTG+AGG | 0.676500 | 2.2:-28350781 | None:intergenic |
GACGGAGAATGAGGACGTGG+CGG | 0.681037 | 2.2:+28341037 | MS.gene066745:CDS |
TGAGTCGGTGACTCGGTCGG+AGG | 0.681570 | 2.2:+28340911 | MS.gene066745:CDS |
TATTCTATTCAAGAAACCAG+CGG | 0.683143 | 2.2:-28351378 | None:intergenic |
GGACGTCGTCTTGATATCGG+CGG | 0.684280 | 2.2:-28340132 | None:intergenic |
CATACAACTGAGGGTCCAAG+AGG | 0.686334 | 2.2:+28350749 | MS.gene066745:CDS |
CGAGTTTGTCGAAGACGAGG+AGG | 0.686373 | 2.2:+28340973 | MS.gene066745:CDS |
AGGGAAAGTAGTGCAAGTGG+TGG | 0.690401 | 2.2:+28351689 | MS.gene066745:CDS |
ACTTGGAAACCATACAACTG+AGG | 0.710642 | 2.2:+28350739 | MS.gene066745:CDS |
CGCTGCGTTGGACATCACGA+CGG | 0.716962 | 2.2:-28340255 | None:intergenic |
ATACAACTGAGGGTCCAAGA+GGG | 0.731011 | 2.2:+28350750 | MS.gene066745:CDS |
TCAGACAAGAAGAAGAACAA+CGG | 0.731120 | 2.2:+28351353 | MS.gene066745:CDS |
CATTGCTGAAGAGAGTAACG+AGG | 0.733636 | 2.2:-28350809 | None:intergenic |
AATTGAAGAACAAAGCAGAG+GGG | 0.751790 | 2.2:+28351327 | MS.gene066745:CDS |
TGAACGACGAGAGAAGAACA+CGG | 0.764187 | 2.2:-28350835 | None:intergenic |
CGGAAGCTATGATAACAACG+AGG | 0.775503 | 2.2:+28340833 | MS.gene066745:CDS |
ACGACGAGAGAAGAACACGG+TGG | 0.843016 | 2.2:-28350832 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 28340052 | 28351748 | 28340052 | ID=MS.gene066745 |
chr2.2 | mRNA | 28340052 | 28351748 | 28340052 | ID=MS.gene066745.t1;Parent=MS.gene066745 |
chr2.2 | exon | 28340052 | 28340279 | 28340052 | ID=MS.gene066745.t1.exon1;Parent=MS.gene066745.t1 |
chr2.2 | CDS | 28340052 | 28340279 | 28340052 | ID=cds.MS.gene066745.t1;Parent=MS.gene066745.t1 |
chr2.2 | exon | 28340435 | 28340685 | 28340435 | ID=MS.gene066745.t1.exon2;Parent=MS.gene066745.t1 |
chr2.2 | CDS | 28340435 | 28340685 | 28340435 | ID=cds.MS.gene066745.t1;Parent=MS.gene066745.t1 |
chr2.2 | exon | 28340800 | 28341151 | 28340800 | ID=MS.gene066745.t1.exon3;Parent=MS.gene066745.t1 |
chr2.2 | CDS | 28340800 | 28341151 | 28340800 | ID=cds.MS.gene066745.t1;Parent=MS.gene066745.t1 |
chr2.2 | exon | 28350699 | 28351748 | 28350699 | ID=MS.gene066745.t1.exon4;Parent=MS.gene066745.t1 |
chr2.2 | CDS | 28350699 | 28351748 | 28350699 | ID=cds.MS.gene066745.t1;Parent=MS.gene066745.t1 |
Gene Sequence |
Protein sequence |