Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09310.t1 | AET04181.1 | 95.6 | 365 | 16 | 0 | 51 | 415 | 124 | 488 | 2.10E-194 | 688.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09310.t1 | G7LHY7 | 95.6 | 365 | 16 | 0 | 51 | 415 | 124 | 488 | 1.5e-194 | 688.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene09310 | 0.832676 | 8.25E-56 | -1.69E-46 |
| MS.gene049150 | MS.gene09310 | 0.865821 | 4.47E-65 | -1.69E-46 |
| MS.gene049151 | MS.gene09310 | 0.840553 | 8.12E-58 | -1.69E-46 |
| MS.gene049153 | MS.gene09310 | 0.864318 | 1.33E-64 | -1.69E-46 |
| MS.gene049170 | MS.gene09310 | 0.828391 | 9.23E-55 | -1.69E-46 |
| MS.gene049230 | MS.gene09310 | 0.836258 | 1.04E-56 | -1.69E-46 |
| MS.gene049260 | MS.gene09310 | 0.802689 | 4.98E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene09310 | 0.853413 | 2.43E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene09310 | 0.823677 | 1.22E-53 | -1.69E-46 |
| MS.gene049910 | MS.gene09310 | 0.801473 | 8.86E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene09310 | 0.83509 | 2.05E-56 | -1.69E-46 |
| MS.gene050128 | MS.gene09310 | 0.807303 | 5.40E-50 | -1.69E-46 |
| MS.gene050133 | MS.gene09310 | -0.813995 | 1.93E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene09310 | 0.810132 | 1.34E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene09310 | 0.810393 | 1.18E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene09310 | 0.806571 | 7.71E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene09310 | 0.80802 | 3.80E-50 | -1.69E-46 |
| MS.gene050398 | MS.gene09310 | 0.814324 | 1.63E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene09310 | -0.888589 | 5.16E-73 | -1.69E-46 |
| MS.gene050464 | MS.gene09310 | 0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene09310 | 0.811727 | 6.06E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene09310 | -0.815103 | 1.10E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene09310 | 0.873157 | 1.83E-67 | -1.69E-46 |
| MS.gene050670 | MS.gene09310 | 0.81342 | 2.58E-51 | -1.69E-46 |
| MS.gene050971 | MS.gene09310 | 0.83073 | 2.49E-55 | -1.69E-46 |
| MS.gene051373 | MS.gene09310 | 0.828229 | 1.01E-54 | -1.69E-46 |
| MS.gene051521 | MS.gene09310 | 0.802228 | 6.20E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene09310 | 0.817534 | 3.14E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene09310 | 0.800891 | 1.17E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene09310 | 0.83813 | 3.45E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene09310 | 0.916946 | 9.65E-86 | -1.69E-46 |
| MS.gene052011 | MS.gene09310 | -0.855632 | 5.54E-62 | -1.69E-46 |
| MS.gene052077 | MS.gene09310 | 0.887508 | 1.34E-72 | -1.69E-46 |
| MS.gene052134 | MS.gene09310 | 0.821543 | 3.82E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene09310 | 0.835616 | 1.51E-56 | -1.69E-46 |
| MS.gene052176 | MS.gene09310 | 0.811427 | 7.04E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene09310 | 0.855894 | 4.64E-62 | -1.69E-46 |
| MS.gene052253 | MS.gene09310 | 0.835665 | 1.47E-56 | -1.69E-46 |
| MS.gene052340 | MS.gene09310 | 0.865928 | 4.14E-65 | -1.69E-46 |
| MS.gene052389 | MS.gene09310 | 0.813158 | 2.95E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene09310 | 0.840369 | 9.06E-58 | -1.69E-46 |
| MS.gene05316 | MS.gene09310 | 0.844589 | 6.88E-59 | -1.69E-46 |
| MS.gene053176 | MS.gene09310 | 0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene053330 | MS.gene09310 | 0.809861 | 1.53E-50 | -1.69E-46 |
| MS.gene053494 | MS.gene09310 | 0.8493 | 3.53E-60 | -1.69E-46 |
| MS.gene053557 | MS.gene09310 | 0.830436 | 2.94E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene09310 | 0.834717 | 2.55E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene09310 | 0.841994 | 3.39E-58 | -1.69E-46 |
| MS.gene054183 | MS.gene09310 | 0.854829 | 9.48E-62 | -1.69E-46 |
| MS.gene054349 | MS.gene09310 | 0.860839 | 1.56E-63 | -1.69E-46 |
| MS.gene054548 | MS.gene09310 | 0.803448 | 3.47E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene09310 | 0.830807 | 2.39E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene09310 | 0.820795 | 5.68E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene09310 | 0.85246 | 4.55E-61 | -1.69E-46 |
| MS.gene054983 | MS.gene09310 | 0.821179 | 4.63E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene09310 | 0.809373 | 1.95E-50 | -1.69E-46 |
| MS.gene055367 | MS.gene09310 | 0.808856 | 2.52E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene09310 | 0.829172 | 5.97E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene09310 | 0.8909 | 6.49E-74 | -1.69E-46 |
| MS.gene05556 | MS.gene09310 | 0.83004 | 3.67E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene09310 | 0.821743 | 3.43E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene09310 | 0.842219 | 2.95E-58 | -1.69E-46 |
| MS.gene055859 | MS.gene09310 | 0.80226 | 6.10E-49 | -1.69E-46 |
| MS.gene056233 | MS.gene09310 | 0.82423 | 9.04E-54 | -1.69E-46 |
| MS.gene056447 | MS.gene09310 | 0.81282 | 3.50E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene09310 | 0.808913 | 2.45E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene09310 | 0.879749 | 9.67E-70 | -1.69E-46 |
| MS.gene056723 | MS.gene09310 | 0.858469 | 8.06E-63 | -1.69E-46 |
| MS.gene056899 | MS.gene09310 | -0.814524 | 1.47E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene09310 | 0.90556 | 3.77E-80 | -1.69E-46 |
| MS.gene05702 | MS.gene09310 | 0.80153 | 8.62E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene09310 | 0.815937 | 7.16E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene09310 | 0.898212 | 6.62E-77 | -1.69E-46 |
| MS.gene058002 | MS.gene09310 | 0.827409 | 1.59E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene09310 | 0.8159 | 7.29E-52 | -1.69E-46 |
| MS.gene058139 | MS.gene09310 | 0.822367 | 2.46E-53 | -1.69E-46 |
| MS.gene058142 | MS.gene09310 | 0.893188 | 7.93E-75 | -1.69E-46 |
| MS.gene058276 | MS.gene09310 | 0.83091 | 2.25E-55 | -1.69E-46 |
| MS.gene058435 | MS.gene09310 | 0.823573 | 1.29E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene09310 | 0.861315 | 1.12E-63 | -1.69E-46 |
| MS.gene058749 | MS.gene09310 | 0.823322 | 1.47E-53 | -1.69E-46 |
| MS.gene058949 | MS.gene09310 | 0.818159 | 2.27E-52 | -1.69E-46 |
| MS.gene059011 | MS.gene09310 | 0.810566 | 1.08E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene09310 | 0.819326 | 1.23E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene09310 | 0.853023 | 3.14E-61 | -1.69E-46 |
| MS.gene059285 | MS.gene09310 | 0.863795 | 1.93E-64 | -1.69E-46 |
| MS.gene059420 | MS.gene09310 | 0.85055 | 1.58E-60 | -1.69E-46 |
| MS.gene059609 | MS.gene09310 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene059788 | MS.gene09310 | 0.853232 | 2.74E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene09310 | 0.854802 | 9.66E-62 | -1.69E-46 |
| MS.gene059894 | MS.gene09310 | 0.833861 | 4.18E-56 | -1.69E-46 |
| MS.gene059899 | MS.gene09310 | 0.8262 | 3.09E-54 | -1.69E-46 |
| MS.gene060083 | MS.gene09310 | 0.809251 | 2.08E-50 | -1.69E-46 |
| MS.gene060247 | MS.gene09310 | 0.819707 | 1.01E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene09310 | 0.826842 | 2.17E-54 | -1.69E-46 |
| MS.gene060940 | MS.gene09310 | 0.812282 | 4.58E-51 | -1.69E-46 |
| MS.gene060986 | MS.gene09310 | 0.800018 | 1.75E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene09310 | 0.828023 | 1.13E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene09310 | 0.842175 | 3.04E-58 | -1.69E-46 |
| MS.gene061114 | MS.gene09310 | -0.821762 | 3.40E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene09310 | 0.836506 | 8.99E-57 | -1.69E-46 |
| MS.gene061159 | MS.gene09310 | 0.851614 | 7.92E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09310.t1 | MTR_8g085620 | 93.990 | 416 | 24 | 1 | 1 | 415 | 73 | 488 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09310.t1 | AT1G55280 | 47.355 | 397 | 180 | 10 | 20 | 408 | 14 | 389 | 9.89e-108 | 323 |
| MS.gene09310.t1 | AT1G55280 | 47.355 | 397 | 180 | 10 | 20 | 408 | 59 | 434 | 2.91e-107 | 323 |
Find 93 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAAGACTTGAGGCTATT+TGG | 0.152892 | 4.1:+14085356 | MS.gene09310:CDS |
| AAAATTAGTATCAGAGAATT+TGG | 0.170887 | 4.1:-14084008 | None:intergenic |
| ATAAATCCAAATCTTTATTC+AGG | 0.239984 | 4.1:+14085128 | MS.gene09310:CDS |
| GTAAGTGTGGCATTGACTTT+AGG | 0.270375 | 4.1:+14086741 | MS.gene09310:CDS |
| CTTGACCCTGAATAAAGATT+TGG | 0.283207 | 4.1:-14085134 | None:intergenic |
| ATTTGGGTCGGTGTTGATTC+AGG | 0.287536 | 4.1:+14085373 | MS.gene09310:CDS |
| AACTTCTGCCCAAGTGTTAT+AGG | 0.288096 | 4.1:-14086894 | None:intergenic |
| ATTCCAACTATGATATCTTT+TGG | 0.298685 | 4.1:-14086822 | None:intergenic |
| ATTCATCAACAGAACCTCTT+TGG | 0.299534 | 4.1:-14085312 | None:intergenic |
| TAAGTGTGGCATTGACTTTA+GGG | 0.316132 | 4.1:+14086742 | MS.gene09310:CDS |
| CACTGGTATTCTCTTCAATA+TGG | 0.322369 | 4.1:-14085242 | None:intergenic |
| CCTTTGAGATGACAGGAGTT+TGG | 0.322539 | 4.1:-14086461 | None:intergenic |
| TGCAAGACTTGAGGCTATTT+GGG | 0.323891 | 4.1:+14085357 | MS.gene09310:CDS |
| GCTTTCTTTGTTGGTGGGAT+TGG | 0.336342 | 4.1:+14086600 | MS.gene09310:CDS |
| ACCGATCATTCTACAGAATC+AGG | 0.346191 | 4.1:+14085274 | MS.gene09310:CDS |
| GGAACTGATGCATTATTTAG+AGG | 0.356287 | 4.1:+14086702 | MS.gene09310:CDS |
| ACCGGGTTCGCTTTCTTTGT+TGG | 0.369998 | 4.1:+14086591 | MS.gene09310:CDS |
| TATGGTGGTACCTCTTCTTC+TGG | 0.372818 | 4.1:-14086282 | None:intergenic |
| ACCTCTTCTTCTGGCAATGA+TGG | 0.373177 | 4.1:-14086273 | None:intergenic |
| TTCAGAATTTATGACTGTTA+AGG | 0.381614 | 4.1:-14086244 | None:intergenic |
| ATTTGAGCCATATAAGTTGC+TGG | 0.397282 | 4.1:-14085164 | None:intergenic |
| TTGGTTACCAGCAACTTATA+TGG | 0.399396 | 4.1:+14085157 | MS.gene09310:CDS |
| CTTTCTTCCTTTGAGATGAC+AGG | 0.409228 | 4.1:-14086468 | None:intergenic |
| CCAATACGACTTTCGAATTG+AGG | 0.415792 | 4.1:+14086314 | MS.gene09310:CDS |
| TTCTTTGTTGGTGGGATTGG+AGG | 0.421123 | 4.1:+14086603 | MS.gene09310:CDS |
| AGGTATGTGGACGGATTGCC+AGG | 0.423984 | 4.1:+14086651 | MS.gene09310:CDS |
| CTATGCTTGATAGACGTAGA+TGG | 0.426250 | 4.1:+14085214 | MS.gene09310:CDS |
| TGCATTATTTAGAGGATTGA+AGG | 0.430785 | 4.1:+14086710 | MS.gene09310:CDS |
| CCTCAATTCGAAAGTCGTAT+TGG | 0.435999 | 4.1:-14086314 | None:intergenic |
| CTCTCAGCTGGTGAAAATAC+CGG | 0.436324 | 4.1:+14086573 | MS.gene09310:CDS |
| TCAAGCTGAGTCACAAGGTT+AGG | 0.450248 | 4.1:-14086384 | None:intergenic |
| TTCCTCTAAGGTCAGGTCAA+TGG | 0.462389 | 4.1:+14086205 | MS.gene09310:intron |
| ACACCAAAAGATATCATAGT+TGG | 0.465828 | 4.1:+14086819 | MS.gene09310:CDS |
| AATATAAGTGACTTCAATGC+TGG | 0.469726 | 4.1:+14085184 | MS.gene09310:CDS |
| TGGCAAAACAACTGATGGTC+TGG | 0.469882 | 4.1:-14085041 | None:intergenic |
| AACCTTGTGACTCAGCTTGA+AGG | 0.472386 | 4.1:+14086387 | MS.gene09310:CDS |
| GGTTCGCTTTCTTTGTTGGT+GGG | 0.473259 | 4.1:+14086595 | MS.gene09310:CDS |
| GATATCATAGTTGGAATGAT+GGG | 0.476033 | 4.1:+14086828 | MS.gene09310:CDS |
| TCGTATTGGAAGCCGGTGTA+TGG | 0.480131 | 4.1:-14086300 | None:intergenic |
| AGATATCATAGTTGGAATGA+TGG | 0.485907 | 4.1:+14086827 | MS.gene09310:CDS |
| CGAATTGAGGATGCATTGCT+TGG | 0.486399 | 4.1:+14086327 | MS.gene09310:CDS |
| ATCTTTATTCAGGGTCAAGT+TGG | 0.488774 | 4.1:+14085138 | MS.gene09310:CDS |
| GCATTTAAGCCTATAACACT+TGG | 0.489741 | 4.1:+14086885 | MS.gene09310:CDS |
| TAAATCCAAATCTTTATTCA+GGG | 0.498208 | 4.1:+14085129 | MS.gene09310:CDS |
| TGTATCTGCTATTGTTGCAG+AGG | 0.499344 | 4.1:+14086631 | MS.gene09310:CDS |
| GGGTTCGCTTTCTTTGTTGG+TGG | 0.499672 | 4.1:+14086594 | MS.gene09310:CDS |
| GTCAATGCCACACTTACTAT+AGG | 0.502910 | 4.1:-14086735 | None:intergenic |
| TCAATTGCTTCCCTCTCAGC+TGG | 0.512231 | 4.1:+14086561 | MS.gene09310:CDS |
| ATGTAAAGTTTCTGTGGTGT+TGG | 0.512933 | 4.1:+14086860 | MS.gene09310:CDS |
| TACTTTATCTTCCCTTGAGG+AGG | 0.516988 | 4.1:+14085105 | MS.gene09310:CDS |
| CATACTTTCACGTCAGAGGC+TGG | 0.524216 | 4.1:-14085061 | None:intergenic |
| CCCTGATTCTGTAGAATGAT+CGG | 0.525561 | 4.1:-14085275 | None:intergenic |
| ACCAACAAAGAAAGCGAACC+CGG | 0.525652 | 4.1:-14086592 | None:intergenic |
| ACTTGAAATTCTTCTAGAAG+AGG | 0.530331 | 4.1:-14083957 | None:intergenic |
| ATTTGGATTTATCCTCCTCA+AGG | 0.531242 | 4.1:-14085117 | None:intergenic |
| GATATACTTCATTTCCAAAG+AGG | 0.531996 | 4.1:+14085298 | MS.gene09310:CDS |
| TAACAGTCATAAATTCTGAA+TGG | 0.537218 | 4.1:+14086247 | MS.gene09310:CDS |
| ACACTTGGGCAGAAGTTACC+TGG | 0.542605 | 4.1:+14086900 | MS.gene09310:CDS |
| ACCTTGTGACTCAGCTTGAA+GGG | 0.543737 | 4.1:+14086388 | MS.gene09310:CDS |
| GCATTATTTAGAGGATTGAA+GGG | 0.551480 | 4.1:+14086711 | MS.gene09310:CDS |
| TTTGTAGTGAAGTATAGCTC+AGG | 0.553123 | 4.1:+14086774 | MS.gene09310:CDS |
| AGACTTGAGGCTATTTGGGT+CGG | 0.558381 | 4.1:+14085361 | MS.gene09310:CDS |
| TCTTGCATGTAAAGTTTCTG+TGG | 0.561151 | 4.1:+14086854 | MS.gene09310:CDS |
| ACCATCATTGCCAGAAGAAG+AGG | 0.565997 | 4.1:+14086272 | MS.gene09310:CDS |
| GAGGCTGGCAAAACAACTGA+TGG | 0.567913 | 4.1:-14085046 | None:intergenic |
| TTGTGAATGAATGAAGTTGA+AGG | 0.568843 | 4.1:-14083899 | None:intergenic |
| TGATCGGTCATCAAACTCAC+TGG | 0.570085 | 4.1:-14085259 | None:intergenic |
| GCTATTGTTGCAGAGGTATG+TGG | 0.570298 | 4.1:+14086638 | MS.gene09310:CDS |
| AGGTCAGGTCAATGGAGACT+AGG | 0.573348 | 4.1:+14086213 | MS.gene09310:intron |
| TCGAAAGTCGTATTGGAAGC+CGG | 0.576014 | 4.1:-14086307 | None:intergenic |
| CATCTCAAAGGAAGAAAGCA+TGG | 0.576259 | 4.1:+14086473 | MS.gene09310:CDS |
| CCGATCATTCTACAGAATCA+GGG | 0.579731 | 4.1:+14085275 | MS.gene09310:CDS |
| CCAAACTCCTGTCATCTCAA+AGG | 0.580577 | 4.1:+14086461 | MS.gene09310:CDS |
| TGTGACTCAGCTTGAAGGGA+CGG | 0.586916 | 4.1:+14086392 | MS.gene09310:CDS |
| AGGAACTGATCTATCCATGT+TGG | 0.588578 | 4.1:+14086353 | MS.gene09310:CDS |
| CATCTACGTCTATCAAGCAT+AGG | 0.594306 | 4.1:-14085213 | None:intergenic |
| AAATACTTTATCTTCCCTTG+AGG | 0.599620 | 4.1:+14085102 | MS.gene09310:CDS |
| TGTGCATACTTTCACGTCAG+AGG | 0.601261 | 4.1:-14085065 | None:intergenic |
| TTTGGATTTATCCTCCTCAA+GGG | 0.602029 | 4.1:-14085116 | None:intergenic |
| TCTCAGCTGGTGAAAATACC+GGG | 0.602142 | 4.1:+14086574 | MS.gene09310:CDS |
| TATTGGAAGCCGGTGTATGG+TGG | 0.603889 | 4.1:-14086297 | None:intergenic |
| AAATTAATCACAAGCAACAA+AGG | 0.606917 | 4.1:+14086678 | MS.gene09310:CDS |
| GAGGATGCATTGCTTGGTGA+AGG | 0.609971 | 4.1:+14086333 | MS.gene09310:CDS |
| CATTTAAGCCTATAACACTT+GGG | 0.611508 | 4.1:+14086886 | MS.gene09310:CDS |
| GAAGGGTCCTATAGTAAGTG+TGG | 0.617641 | 4.1:+14086728 | MS.gene09310:CDS |
| TCCCTTCAAGCTGAGTCACA+AGG | 0.621122 | 4.1:-14086389 | None:intergenic |
| CGATCATTCTACAGAATCAG+GGG | 0.632486 | 4.1:+14085276 | MS.gene09310:CDS |
| GTGTATAATTACATGTCACC+AGG | 0.632874 | 4.1:-14086918 | None:intergenic |
| GTTAGGTCTTAATTCCAACA+TGG | 0.676496 | 4.1:-14086367 | None:intergenic |
| TTAATCACAAGCAACAAAGG+AGG | 0.678453 | 4.1:+14086681 | MS.gene09310:CDS |
| TTGTTGCAGAGGTATGTGGA+CGG | 0.680400 | 4.1:+14086642 | MS.gene09310:CDS |
| GAAGAGGTACCACCATACAC+CGG | 0.692574 | 4.1:+14086288 | MS.gene09310:CDS |
| CTCAAAGGAAGAAAGCATGG+AGG | 0.740445 | 4.1:+14086476 | MS.gene09310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATAAAAGTACTTTATT+TGG | - | chr4.1:14084910-14084929 | None:intergenic | 10.0% |
| !!! | AAATATATGATTCAAAATTT+TGG | + | chr4.1:14084206-14084225 | MS.gene09310:intron | 10.0% |
| !!! | AATATAGAAATTTAAAGTTT+TGG | - | chr4.1:14086092-14086111 | None:intergenic | 10.0% |
| !!! | ATTAAAAATCTTAACTTTTA+AGG | + | chr4.1:14084067-14084086 | MS.gene09310:intron | 10.0% |
| !!! | ATTCTAGTATATATTTTTTT+TGG | + | chr4.1:14085402-14085421 | MS.gene09310:intron | 10.0% |
| !! | TTTCAAAATTAAAATATGTG+AGG | - | chr4.1:14084430-14084449 | None:intergenic | 15.0% |
| !!! | ATTTGATTTTGTTAAAGTAT+TGG | + | chr4.1:14084400-14084419 | MS.gene09310:intron | 15.0% |
| !! | AAAATTAGTATCAGAGAATT+TGG | - | chr4.1:14084011-14084030 | None:intergenic | 20.0% |
| !! | AACTTTCTAAATTGTTAACA+GGG | + | chr4.1:14085607-14085626 | MS.gene09310:intron | 20.0% |
| !! | ATAAATCCAAATCTTTATTC+AGG | + | chr4.1:14085128-14085147 | MS.gene09310:CDS | 20.0% |
| !! | ATATTATTAACCATGATTTC+AGG | - | chr4.1:14085784-14085803 | None:intergenic | 20.0% |
| !! | ATATTGTTTGAACATCAATT+TGG | - | chr4.1:14085947-14085966 | None:intergenic | 20.0% |
| !! | ATTTGGTTAATAGATATATC+AGG | + | chr4.1:14085658-14085677 | MS.gene09310:intron | 20.0% |
| !! | GTATATTAAATATTTCAGTG+TGG | + | chr4.1:14084505-14084524 | MS.gene09310:intron | 20.0% |
| !! | GTTAATAATATTCGAATTCA+TGG | + | chr4.1:14085793-14085812 | MS.gene09310:intron | 20.0% |
| !! | TAAATCCAAATCTTTATTCA+GGG | + | chr4.1:14085129-14085148 | MS.gene09310:CDS | 20.0% |
| !! | TATTGTTTGAACATCAATTT+GGG | - | chr4.1:14085946-14085965 | None:intergenic | 20.0% |
| !!! | AAATTGTAACTTTTGTAACA+CGG | - | chr4.1:14084680-14084699 | None:intergenic | 20.0% |
| !!! | AATTTTGGAGGTATTTTTAT+TGG | + | chr4.1:14084221-14084240 | MS.gene09310:intron | 20.0% |
| !!! | ATAGAAATTTAAAGTTTTGG+AGG | - | chr4.1:14086089-14086108 | None:intergenic | 20.0% |
| !!! | TACATATAACAAATGACTTT+TGG | - | chr4.1:14084941-14084960 | None:intergenic | 20.0% |
| !!! | TATATGATTCAAAATTTTGG+AGG | + | chr4.1:14084209-14084228 | MS.gene09310:intron | 20.0% |
| !!! | TCTTTTTTGAACAAACTTAT+AGG | - | chr4.1:14086420-14086439 | None:intergenic | 20.0% |
| !!! | TGATGTTCAAACAATATTTT+TGG | + | chr4.1:14085950-14085969 | MS.gene09310:intron | 20.0% |
| !!! | TTAACTGTTCTCTTTATTTT+GGG | + | chr4.1:14084112-14084131 | MS.gene09310:intron | 20.0% |
| !!! | TTTAACTGTTCTCTTTATTT+TGG | + | chr4.1:14084111-14084130 | MS.gene09310:intron | 20.0% |
| !!! | TTTAGAGTTTGAAAAGATAA+CGG | + | chr4.1:14084697-14084716 | MS.gene09310:intron | 20.0% |
| ! | AAATTAATCACAAGCAACAA+AGG | + | chr4.1:14086678-14086697 | MS.gene09310:CDS | 25.0% |
| ! | AAATTGTATTTCCTGACATT+TGG | + | chr4.1:14085520-14085539 | MS.gene09310:intron | 25.0% |
| ! | ATAATATTCGAATTCATGGT+TGG | + | chr4.1:14085797-14085816 | MS.gene09310:intron | 25.0% |
| ! | ATTTGAACACTTGAAAATCA+AGG | - | chr4.1:14085743-14085762 | None:intergenic | 25.0% |
| ! | ATTTGATGTTTGCCTATATA+TGG | + | chr4.1:14084326-14084345 | MS.gene09310:intron | 25.0% |
| ! | CAACTTTCTAAATTGTTAAC+AGG | + | chr4.1:14085606-14085625 | MS.gene09310:intron | 25.0% |
| ! | GAAGCTTGAAAAATTAATGT+TGG | + | chr4.1:14086141-14086160 | MS.gene09310:intron | 25.0% |
| ! | GAGTACTTAATGATTATAGT+TGG | + | chr4.1:14084529-14084548 | MS.gene09310:intron | 25.0% |
| ! | GTTAATCACGTTTAAATTTG+TGG | - | chr4.1:14085721-14085740 | None:intergenic | 25.0% |
| ! | TAACAGTCATAAATTCTGAA+TGG | + | chr4.1:14086247-14086266 | MS.gene09310:CDS | 25.0% |
| ! | TAACGAAGAAATTAAGAAGT+GGG | - | chr4.1:14084043-14084062 | None:intergenic | 25.0% |
| ! | TACCATTTCTGTTTAAAAAC+TGG | - | chr4.1:14085554-14085573 | None:intergenic | 25.0% |
| ! | TATTTAATATACCACTTGCT+AGG | - | chr4.1:14084497-14084516 | None:intergenic | 25.0% |
| ! | TCATCATATATGCCATATAT+AGG | - | chr4.1:14084341-14084360 | None:intergenic | 25.0% |
| ! | TGTTCAAATCTACATATAGT+TGG | + | chr4.1:14085754-14085773 | MS.gene09310:intron | 25.0% |
| ! | TGTTTGTAGTTATTATTGTC+AGG | + | chr4.1:14084471-14084490 | MS.gene09310:intron | 25.0% |
| ! | TTAACGAAGAAATTAAGAAG+TGG | - | chr4.1:14084044-14084063 | None:intergenic | 25.0% |
| ! | TTCAGAATTTATGACTGTTA+AGG | - | chr4.1:14086247-14086266 | None:intergenic | 25.0% |
| !! | AAGGTTTAGTTTCACTTAAA+TGG | + | chr4.1:14084086-14084105 | MS.gene09310:intron | 25.0% |
| !! | ATTCCAACTATGATATCTTT+TGG | - | chr4.1:14086825-14086844 | None:intergenic | 25.0% |
| !! | TTCCAGTTTTTAAACAGAAA+TGG | + | chr4.1:14085549-14085568 | MS.gene09310:intron | 25.0% |
| !! | TTCTCTGATACTAATTTTCA+AGG | + | chr4.1:14084013-14084032 | MS.gene09310:CDS | 25.0% |
| !!! | GTTGATGAATTCATTTTTGA+GGG | + | chr4.1:14085325-14085344 | MS.gene09310:CDS | 25.0% |
| !!! | TGATTATAGTTGGTTAGTTT+TGG | + | chr4.1:14084539-14084558 | MS.gene09310:intron | 25.0% |
| !!! | TGTTGATGAATTCATTTTTG+AGG | + | chr4.1:14085324-14085343 | MS.gene09310:CDS | 25.0% |
| AAATACTTTATCTTCCCTTG+AGG | + | chr4.1:14085102-14085121 | MS.gene09310:CDS | 30.0% | |
| AACGAAGAAATTAAGAAGTG+GGG | - | chr4.1:14084042-14084061 | None:intergenic | 30.0% | |
| AAGACCATGCTAATATAAAC+CGG | - | chr4.1:14084835-14084854 | None:intergenic | 30.0% | |
| AATATAAGTGACTTCAATGC+TGG | + | chr4.1:14085184-14085203 | MS.gene09310:CDS | 30.0% | |
| AATATTTACTCCAAGAAGCA+TGG | - | chr4.1:14084882-14084901 | None:intergenic | 30.0% | |
| ACACCAAAAGATATCATAGT+TGG | + | chr4.1:14086819-14086838 | MS.gene09310:CDS | 30.0% | |
| ACAGCACTTCAAAAAATTTG+AGG | - | chr4.1:14085499-14085518 | None:intergenic | 30.0% | |
| AGATATCATAGTTGGAATGA+TGG | + | chr4.1:14086827-14086846 | MS.gene09310:CDS | 30.0% | |
| ATATAGGCAAACATCAAATC+AGG | - | chr4.1:14084325-14084344 | None:intergenic | 30.0% | |
| CAGCACTTCAAAAAATTTGA+GGG | - | chr4.1:14085498-14085517 | None:intergenic | 30.0% | |
| CATTTAAGCCTATAACACTT+GGG | + | chr4.1:14086886-14086905 | MS.gene09310:CDS | 30.0% | |
| GACTTCAAAATTGAAGGTTA+AGG | - | chr4.1:14085454-14085473 | None:intergenic | 30.0% | |
| GATATACTTCATTTCCAAAG+AGG | + | chr4.1:14085298-14085317 | MS.gene09310:CDS | 30.0% | |
| GATATCATAGTTGGAATGAT+GGG | + | chr4.1:14086828-14086847 | MS.gene09310:CDS | 30.0% | |
| GCATTATTTAGAGGATTGAA+GGG | + | chr4.1:14086711-14086730 | MS.gene09310:CDS | 30.0% | |
| GTAGTTCAATAAGTAGTTAG+TGG | - | chr4.1:14085867-14085886 | None:intergenic | 30.0% | |
| TAAAGGGACTTCAAAATTGA+AGG | - | chr4.1:14085460-14085479 | None:intergenic | 30.0% | |
| TGCATTATTTAGAGGATTGA+AGG | + | chr4.1:14086710-14086729 | MS.gene09310:CDS | 30.0% | |
| TTGTGAATGAATGAAGTTGA+AGG | - | chr4.1:14083902-14083921 | None:intergenic | 30.0% | |
| ! | AATATATGATGGAATCCTAG+TGG | - | chr4.1:14086026-14086045 | None:intergenic | 30.0% |
| ! | ACTTGAAATTCTTCTAGAAG+AGG | - | chr4.1:14083960-14083979 | None:intergenic | 30.0% |
| ! | ATATATGATGGAATCCTAGT+GGG | - | chr4.1:14086025-14086044 | None:intergenic | 30.0% |
| ! | CAAACAACTTTGAAAAGAGT+AGG | - | chr4.1:14084457-14084476 | None:intergenic | 30.0% |
| ! | CTTGTGATTAATTTTGAACC+TGG | - | chr4.1:14086672-14086691 | None:intergenic | 30.0% |
| ! | GAAGACAGATGTTGATTAAA+GGG | - | chr4.1:14085476-14085495 | None:intergenic | 30.0% |
| ! | GCTTCTTGGAGTAAATATTT+TGG | + | chr4.1:14084883-14084902 | MS.gene09310:intron | 30.0% |
| !! | AGGAAGCTTTTTAAGCAATT+TGG | + | chr4.1:14084245-14084264 | MS.gene09310:intron | 30.0% |
| !! | GGAAGCTTTTTAAGCAATTT+GGG | + | chr4.1:14084246-14084265 | MS.gene09310:intron | 30.0% |
| !! | GTTAAAAGAAGCGTTACATT+TGG | + | chr4.1:14085641-14085660 | MS.gene09310:intron | 30.0% |
| !!! | TTGGAGGTATTTTTATTGGA+AGG | + | chr4.1:14084225-14084244 | MS.gene09310:intron | 30.0% |
| AAATGACATTGATATGCCTC+TGG | - | chr4.1:14086000-14086019 | None:intergenic | 35.0% | |
| ATACTCTTCTTCTTCCTCTA+AGG | + | chr4.1:14086193-14086212 | MS.gene09310:intron | 35.0% | |
| ATCTTTATTCAGGGTCAAGT+TGG | + | chr4.1:14085138-14085157 | MS.gene09310:CDS | 35.0% | |
| ATGAATTATCGACACAAGCA+CGG | - | chr4.1:14084984-14085003 | None:intergenic | 35.0% | |
| ATGTAAAGTTTCTGTGGTGT+TGG | + | chr4.1:14086860-14086879 | MS.gene09310:CDS | 35.0% | |
| ATTCATCAACAGAACCTCTT+TGG | - | chr4.1:14085315-14085334 | None:intergenic | 35.0% | |
| ATTTGAGCCATATAAGTTGC+TGG | - | chr4.1:14085167-14085186 | None:intergenic | 35.0% | |
| ATTTGGATTTATCCTCCTCA+AGG | - | chr4.1:14085120-14085139 | None:intergenic | 35.0% | |
| CAAACATGTACTCAGTACTT+TGG | + | chr4.1:14084754-14084773 | MS.gene09310:intron | 35.0% | |
| CACTGGTATTCTCTTCAATA+TGG | - | chr4.1:14085245-14085264 | None:intergenic | 35.0% | |
| CTTGACCCTGAATAAAGATT+TGG | - | chr4.1:14085137-14085156 | None:intergenic | 35.0% | |
| GCATTTAAGCCTATAACACT+TGG | + | chr4.1:14086885-14086904 | MS.gene09310:CDS | 35.0% | |
| GGAACTGATGCATTATTTAG+AGG | + | chr4.1:14086702-14086721 | MS.gene09310:CDS | 35.0% | |
| GGTTTATATTAGCATGGTCT+TGG | + | chr4.1:14084834-14084853 | MS.gene09310:intron | 35.0% | |
| GTCGATAATTCATAGCTAAC+TGG | + | chr4.1:14084991-14085010 | MS.gene09310:intron | 35.0% | |
| GTTAGGTCTTAATTCCAACA+TGG | - | chr4.1:14086370-14086389 | None:intergenic | 35.0% | |
| TACTGAGTACATGTTTGGAT+TGG | - | chr4.1:14084751-14084770 | None:intergenic | 35.0% | |
| TATGTAATCAGTCTCATGTC+TGG | + | chr4.1:14084955-14084974 | MS.gene09310:intron | 35.0% | |
| TCCAAAAATTGCAAGACTTG+AGG | + | chr4.1:14085348-14085367 | MS.gene09310:CDS | 35.0% | |
| TCTTGCATGTAAAGTTTCTG+TGG | + | chr4.1:14086854-14086873 | MS.gene09310:CDS | 35.0% | |
| TTAATCACAAGCAACAAAGG+AGG | + | chr4.1:14086681-14086700 | MS.gene09310:CDS | 35.0% | |
| TTAATCAGTTCCATGCTTCT+TGG | + | chr4.1:14084869-14084888 | MS.gene09310:intron | 35.0% | |
| TTGGGACAGCTAATATATGA+TGG | - | chr4.1:14086037-14086056 | None:intergenic | 35.0% | |
| TTGGTTACCAGCAACTTATA+TGG | + | chr4.1:14085157-14085176 | MS.gene09310:CDS | 35.0% | |
| TTGTCAAATCATGGCTGATT+TGG | + | chr4.1:14084286-14084305 | MS.gene09310:intron | 35.0% | |
| TTGTCACTGCATCAAACATA+AGG | + | chr4.1:14086111-14086130 | MS.gene09310:intron | 35.0% | |
| TTTGGATTTATCCTCCTCAA+GGG | - | chr4.1:14085119-14085138 | None:intergenic | 35.0% | |
| TTTGGGAGTAATTTACAAGC+TGG | + | chr4.1:14084263-14084282 | MS.gene09310:intron | 35.0% | |
| TTTGTAGTGAAGTATAGCTC+AGG | + | chr4.1:14086774-14086793 | MS.gene09310:CDS | 35.0% | |
| ! | GAAGGAATCATAGTTTTCAC+AGG | - | chr4.1:14083884-14083903 | None:intergenic | 35.0% |
| ! | GGAAGACAGATGTTGATTAA+AGG | - | chr4.1:14085477-14085496 | None:intergenic | 35.0% |
| ! | GGTATAACTCTGAAAATCTG+TGG | - | chr4.1:14085023-14085042 | None:intergenic | 35.0% |
| ! | TATATGATGGAATCCTAGTG+GGG | - | chr4.1:14086024-14086043 | None:intergenic | 35.0% |
| !! | CAAAGTACTGAGTACATGTT+TGG | - | chr4.1:14084756-14084775 | None:intergenic | 35.0% |
| !! | GATGCTGTGCTGATATTTTT+CGG | + | chr4.1:14086534-14086553 | MS.gene09310:CDS | 35.0% |
| !! | TAAGTGTGGCATTGACTTTA+GGG | + | chr4.1:14086742-14086761 | MS.gene09310:CDS | 35.0% |
| AACTTCTGCCCAAGTGTTAT+AGG | - | chr4.1:14086897-14086916 | None:intergenic | 40.0% | |
| ACAAGCTGGTTGTCAAATCA+TGG | + | chr4.1:14084277-14084296 | MS.gene09310:intron | 40.0% | |
| ACCGATCATTCTACAGAATC+AGG | + | chr4.1:14085274-14085293 | MS.gene09310:CDS | 40.0% | |
| AGGAACTGATCTATCCATGT+TGG | + | chr4.1:14086353-14086372 | MS.gene09310:CDS | 40.0% | |
| AGTTGGAACACCTGAAATCA+TGG | + | chr4.1:14085771-14085790 | MS.gene09310:intron | 40.0% | |
| CATCTACGTCTATCAAGCAT+AGG | - | chr4.1:14085216-14085235 | None:intergenic | 40.0% | |
| CATCTCAAAGGAAGAAAGCA+TGG | + | chr4.1:14086473-14086492 | MS.gene09310:CDS | 40.0% | |
| CATGCTAATATAAACCGGCT+AGG | - | chr4.1:14084830-14084849 | None:intergenic | 40.0% | |
| CCAATACGACTTTCGAATTG+AGG | + | chr4.1:14086314-14086333 | MS.gene09310:CDS | 40.0% | |
| CCCTGATTCTGTAGAATGAT+CGG | - | chr4.1:14085278-14085297 | None:intergenic | 40.0% | |
| CCGATCATTCTACAGAATCA+GGG | + | chr4.1:14085275-14085294 | MS.gene09310:CDS | 40.0% | |
| CCTCAATTCGAAAGTCGTAT+TGG | - | chr4.1:14086317-14086336 | None:intergenic | 40.0% | |
| CGATCATTCTACAGAATCAG+GGG | + | chr4.1:14085276-14085295 | MS.gene09310:CDS | 40.0% | |
| CTATGCTTGATAGACGTAGA+TGG | + | chr4.1:14085214-14085233 | MS.gene09310:CDS | 40.0% | |
| GTCAATGCCACACTTACTAT+AGG | - | chr4.1:14086738-14086757 | None:intergenic | 40.0% | |
| GTTAGTGGTGAAGACAAGAT+CGG | - | chr4.1:14085852-14085871 | None:intergenic | 40.0% | |
| TACTTTATCTTCCCTTGAGG+AGG | + | chr4.1:14085105-14085124 | MS.gene09310:CDS | 40.0% | |
| TGCAAGACTTGAGGCTATTT+GGG | + | chr4.1:14085357-14085376 | MS.gene09310:CDS | 40.0% | |
| TGGAATGTGATCCAAATGTC+AGG | - | chr4.1:14085534-14085553 | None:intergenic | 40.0% | |
| TGTATCTGCTATTGTTGCAG+AGG | + | chr4.1:14086631-14086650 | MS.gene09310:CDS | 40.0% | |
| TTGCAAGACTTGAGGCTATT+TGG | + | chr4.1:14085356-14085375 | MS.gene09310:CDS | 40.0% | |
| ! | ATATGATGGAATCCTAGTGG+GGG | - | chr4.1:14086023-14086042 | None:intergenic | 40.0% |
| ! | ATTAGCATGGTCTTGGTAGA+TGG | + | chr4.1:14084841-14084860 | MS.gene09310:intron | 40.0% |
| ! | CTAGCCGGTTTATATTAGCA+TGG | + | chr4.1:14084828-14084847 | MS.gene09310:intron | 40.0% |
| ! | GCCTCAAGTCTTGCAATTTT+TGG | - | chr4.1:14085352-14085371 | None:intergenic | 40.0% |
| ! | GGTTGGTTAAGCTCATTTGA+TGG | + | chr4.1:14085814-14085833 | MS.gene09310:intron | 40.0% |
| ! | TTGAAAAGATAACGGTGCCA+CGG | + | chr4.1:14084705-14084724 | MS.gene09310:intron | 40.0% |
| !! | CTTTCTTCCTTTGAGATGAC+AGG | - | chr4.1:14086471-14086490 | None:intergenic | 40.0% |
| !! | GTAAGTGTGGCATTGACTTT+AGG | + | chr4.1:14086741-14086760 | MS.gene09310:CDS | 40.0% |
| !! | GTTTGGATTGGCAATGTGTT+TGG | - | chr4.1:14084739-14084758 | None:intergenic | 40.0% |
| AACCTTGTGACTCAGCTTGA+AGG | + | chr4.1:14086387-14086406 | MS.gene09310:CDS | 45.0% | |
| ACCAACAAAGAAAGCGAACC+CGG | - | chr4.1:14086595-14086614 | None:intergenic | 45.0% | |
| ACCATCATTGCCAGAAGAAG+AGG | + | chr4.1:14086272-14086291 | MS.gene09310:CDS | 45.0% | |
| ACCTCTTCTTCTGGCAATGA+TGG | - | chr4.1:14086276-14086295 | None:intergenic | 45.0% | |
| ACCTTGTGACTCAGCTTGAA+GGG | + | chr4.1:14086388-14086407 | MS.gene09310:CDS | 45.0% | |
| AGACTTGAGGCTATTTGGGT+CGG | + | chr4.1:14085361-14085380 | MS.gene09310:CDS | 45.0% | |
| CCAAACTCCTGTCATCTCAA+AGG | + | chr4.1:14086461-14086480 | MS.gene09310:CDS | 45.0% | |
| CGAATTGAGGATGCATTGCT+TGG | + | chr4.1:14086327-14086346 | MS.gene09310:CDS | 45.0% | |
| CTCAAAAGCTTGAACCTAGC+CGG | + | chr4.1:14084813-14084832 | MS.gene09310:intron | 45.0% | |
| CTCTCAGCTGGTGAAAATAC+CGG | + | chr4.1:14086573-14086592 | MS.gene09310:CDS | 45.0% | |
| GAAGGGTCCTATAGTAAGTG+TGG | + | chr4.1:14086728-14086747 | MS.gene09310:CDS | 45.0% | |
| GGTTCGCTTTCTTTGTTGGT+GGG | + | chr4.1:14086595-14086614 | MS.gene09310:CDS | 45.0% | |
| TATGGTGGTACCTCTTCTTC+TGG | - | chr4.1:14086285-14086304 | None:intergenic | 45.0% | |
| TCAAGCTGAGTCACAAGGTT+AGG | - | chr4.1:14086387-14086406 | None:intergenic | 45.0% | |
| TCGAAAGTCGTATTGGAAGC+CGG | - | chr4.1:14086310-14086329 | None:intergenic | 45.0% | |
| TCTCAGCTGGTGAAAATACC+GGG | + | chr4.1:14086574-14086593 | MS.gene09310:CDS | 45.0% | |
| TGACATTGATATGCCTCTGG+TGG | - | chr4.1:14085997-14086016 | None:intergenic | 45.0% | |
| TGATCGGTCATCAAACTCAC+TGG | - | chr4.1:14085262-14085281 | None:intergenic | 45.0% | |
| TGGCAAAACAACTGATGGTC+TGG | - | chr4.1:14085044-14085063 | None:intergenic | 45.0% | |
| TGTGCATACTTTCACGTCAG+AGG | - | chr4.1:14085068-14085087 | None:intergenic | 45.0% | |
| TTATTGTCAGGCCTAGCAAG+TGG | + | chr4.1:14084483-14084502 | MS.gene09310:intron | 45.0% | |
| ! | CTCAAAGGAAGAAAGCATGG+AGG | + | chr4.1:14086476-14086495 | MS.gene09310:CDS | 45.0% |
| ! | GCTATTGTTGCAGAGGTATG+TGG | + | chr4.1:14086638-14086657 | MS.gene09310:CDS | 45.0% |
| ! | GCTTTCTTTGTTGGTGGGAT+TGG | + | chr4.1:14086600-14086619 | MS.gene09310:CDS | 45.0% |
| ! | GGTATTTTCACCAGCTGAGA+GGG | - | chr4.1:14086574-14086593 | None:intergenic | 45.0% |
| ! | TCAATGTCATTTCCCCCACT+AGG | + | chr4.1:14086008-14086027 | MS.gene09310:intron | 45.0% |
| ! | TTCTTTGTTGGTGGGATTGG+AGG | + | chr4.1:14086603-14086622 | MS.gene09310:CDS | 45.0% |
| ! | TTGTTGCAGAGGTATGTGGA+CGG | + | chr4.1:14086642-14086661 | MS.gene09310:CDS | 45.0% |
| !! | ATTTGGGTCGGTGTTGATTC+AGG | + | chr4.1:14085373-14085392 | MS.gene09310:CDS | 45.0% |
| !! | CCTTTGAGATGACAGGAGTT+TGG | - | chr4.1:14086464-14086483 | None:intergenic | 45.0% |
| !! | CTTCTTCTTCCTCTAAGGTC+AGG | + | chr4.1:14086198-14086217 | MS.gene09310:intron | 45.0% |
| !! | TGAAAAGATAACGGTGCCAC+GGG | + | chr4.1:14084706-14084725 | MS.gene09310:intron | 45.0% |
| !! | TTCCTCTAAGGTCAGGTCAA+TGG | + | chr4.1:14086205-14086224 | MS.gene09310:intron | 45.0% |
| !! | AAAATATAAATAATATATGT+TGG | - | chr4.1:14086056-14086075 | None:intergenic | 5.0% |
| !! | AAATATAAATAATATATGTT+GGG | - | chr4.1:14086055-14086074 | None:intergenic | 5.0% |
| ACACTTGGGCAGAAGTTACC+TGG | + | chr4.1:14086900-14086919 | MS.gene09310:CDS | 50.0% | |
| ACCGGGTTCGCTTTCTTTGT+TGG | + | chr4.1:14086591-14086610 | MS.gene09310:CDS | 50.0% | |
| AGGTCAGGTCAATGGAGACT+AGG | + | chr4.1:14086213-14086232 | MS.gene09310:intron | 50.0% | |
| CATACTTTCACGTCAGAGGC+TGG | - | chr4.1:14085064-14085083 | None:intergenic | 50.0% | |
| CTCCATTGACCTGACCTTAG+AGG | - | chr4.1:14086210-14086229 | None:intergenic | 50.0% | |
| GAGGCTGGCAAAACAACTGA+TGG | - | chr4.1:14085049-14085068 | None:intergenic | 50.0% | |
| GCATTGTGCAATTCCACCAG+AGG | + | chr4.1:14085981-14086000 | MS.gene09310:intron | 50.0% | |
| GGGTTCGCTTTCTTTGTTGG+TGG | + | chr4.1:14086594-14086613 | MS.gene09310:CDS | 50.0% | |
| TATTGGAAGCCGGTGTATGG+TGG | - | chr4.1:14086300-14086319 | None:intergenic | 50.0% | |
| TCAATTGCTTCCCTCTCAGC+TGG | + | chr4.1:14086561-14086580 | MS.gene09310:CDS | 50.0% | |
| TCCCTTCAAGCTGAGTCACA+AGG | - | chr4.1:14086392-14086411 | None:intergenic | 50.0% | |
| TCGTATTGGAAGCCGGTGTA+TGG | - | chr4.1:14086303-14086322 | None:intergenic | 50.0% | |
| TGTGACTCAGCTTGAAGGGA+CGG | + | chr4.1:14086392-14086411 | MS.gene09310:CDS | 50.0% | |
| ! | CGGTATTTTCACCAGCTGAG+AGG | - | chr4.1:14086575-14086594 | None:intergenic | 50.0% |
| ! | GAGGATGCATTGCTTGGTGA+AGG | + | chr4.1:14086333-14086352 | MS.gene09310:CDS | 50.0% |
| !! | GAAAAGATAACGGTGCCACG+GGG | + | chr4.1:14084707-14084726 | MS.gene09310:intron | 50.0% |
| !! | GAAGAGGTACCACCATACAC+CGG | + | chr4.1:14086288-14086307 | MS.gene09310:CDS | 50.0% |
| TGTGTTTGGCGAAATCCCCG+TGG | - | chr4.1:14084725-14084744 | None:intergenic | 55.0% | |
| !! | AGGTATGTGGACGGATTGCC+AGG | + | chr4.1:14086651-14086670 | MS.gene09310:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14083869 | 14086932 | 14083869 | ID=MS.gene09310 |
| chr4.1 | mRNA | 14083869 | 14086932 | 14083869 | ID=MS.gene09310.t1;Parent=MS.gene09310 |
| chr4.1 | exon | 14083869 | 14084034 | 14083869 | ID=MS.gene09310.t1.exon1;Parent=MS.gene09310.t1 |
| chr4.1 | CDS | 14083869 | 14084034 | 14083869 | ID=cds.MS.gene09310.t1;Parent=MS.gene09310.t1 |
| chr4.1 | exon | 14085026 | 14085394 | 14085026 | ID=MS.gene09310.t1.exon2;Parent=MS.gene09310.t1 |
| chr4.1 | CDS | 14085026 | 14085394 | 14085026 | ID=cds.MS.gene09310.t1;Parent=MS.gene09310.t1 |
| chr4.1 | exon | 14086220 | 14086932 | 14086220 | ID=MS.gene09310.t1.exon3;Parent=MS.gene09310.t1 |
| chr4.1 | CDS | 14086220 | 14086932 | 14086220 | ID=cds.MS.gene09310.t1;Parent=MS.gene09310.t1 |
| Gene Sequence |
| Protein sequence |
