Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28820.t1 | XP_003625986.1 | 97.8 | 777 | 15 | 1 | 1 | 777 | 1 | 775 | 0.00E+00 | 1335.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28820.t1 | O22907 | 80.7 | 721 | 122 | 7 | 1 | 719 | 1 | 706 | 2.4e-296 | 1019.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28820.t1 | G7KTM4 | 97.8 | 777 | 15 | 1 | 1 | 777 | 1 | 775 | 0.0e+00 | 1335.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene28820 | 0.857855 | 1.23E-62 | -1.69E-46 |
| MS.gene049368 | MS.gene28820 | 0.844777 | 6.13E-59 | -1.69E-46 |
| MS.gene049499 | MS.gene28820 | 0.81022 | 1.28E-50 | -1.69E-46 |
| MS.gene049685 | MS.gene28820 | 0.800319 | 1.52E-48 | -1.69E-46 |
| MS.gene049983 | MS.gene28820 | 0.847949 | 8.36E-60 | -1.69E-46 |
| MS.gene04998 | MS.gene28820 | 0.822267 | 2.60E-53 | -1.69E-46 |
| MS.gene050084 | MS.gene28820 | 0.823206 | 1.57E-53 | -1.69E-46 |
| MS.gene050085 | MS.gene28820 | 0.83916 | 1.87E-57 | -1.69E-46 |
| MS.gene050359 | MS.gene28820 | 0.866661 | 2.42E-65 | -1.69E-46 |
| MS.gene050384 | MS.gene28820 | 0.815483 | 9.03E-52 | -1.69E-46 |
| MS.gene050386 | MS.gene28820 | 0.824685 | 7.06E-54 | -1.69E-46 |
| MS.gene050414 | MS.gene28820 | 0.845927 | 2.99E-59 | -1.69E-46 |
| MS.gene050551 | MS.gene28820 | 0.819201 | 1.32E-52 | -1.69E-46 |
| MS.gene050646 | MS.gene28820 | 0.892872 | 1.06E-74 | -1.69E-46 |
| MS.gene050654 | MS.gene28820 | 0.881054 | 3.30E-70 | -1.69E-46 |
| MS.gene050689 | MS.gene28820 | 0.811801 | 5.84E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene28820 | 0.835716 | 1.43E-56 | -1.69E-46 |
| MS.gene050838 | MS.gene28820 | 0.814006 | 1.92E-51 | -1.69E-46 |
| MS.gene050931 | MS.gene28820 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene050941 | MS.gene28820 | 0.825186 | 5.38E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene28820 | 0.835181 | 1.95E-56 | -1.69E-46 |
| MS.gene050955 | MS.gene28820 | 0.803375 | 3.59E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene28820 | 0.8445 | 7.28E-59 | -1.69E-46 |
| MS.gene051043 | MS.gene28820 | 0.822744 | 2.01E-53 | -1.69E-46 |
| MS.gene051184 | MS.gene28820 | 0.816573 | 5.16E-52 | -1.69E-46 |
| MS.gene051226 | MS.gene28820 | 0.804233 | 2.38E-49 | -1.69E-46 |
| MS.gene051233 | MS.gene28820 | 0.80675 | 7.07E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene28820 | 0.843622 | 1.25E-58 | -1.69E-46 |
| MS.gene051275 | MS.gene28820 | 0.806641 | 7.45E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene28820 | 0.841422 | 4.80E-58 | -1.69E-46 |
| MS.gene051381 | MS.gene28820 | 0.819041 | 1.43E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene28820 | 0.807983 | 3.87E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene28820 | 0.846626 | 1.93E-59 | -1.69E-46 |
| MS.gene051902 | MS.gene28820 | 0.813796 | 2.14E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene28820 | 0.809522 | 1.81E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene28820 | 0.802158 | 6.41E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene28820 | 0.84224 | 2.92E-58 | -1.69E-46 |
| MS.gene052242 | MS.gene28820 | -0.832632 | 8.46E-56 | -1.69E-46 |
| MS.gene052296 | MS.gene28820 | 0.815388 | 9.48E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene28820 | 0.832611 | 8.57E-56 | -1.69E-46 |
| MS.gene052342 | MS.gene28820 | 0.84714 | 1.40E-59 | -1.69E-46 |
| MS.gene052434 | MS.gene28820 | 0.830015 | 3.72E-55 | -1.69E-46 |
| MS.gene052533 | MS.gene28820 | 0.806501 | 7.98E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene28820 | 0.831752 | 1.40E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene28820 | 0.856903 | 2.35E-62 | -1.69E-46 |
| MS.gene053079 | MS.gene28820 | 0.809495 | 1.84E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene28820 | 0.813206 | 2.88E-51 | -1.69E-46 |
| MS.gene053564 | MS.gene28820 | 0.813423 | 2.58E-51 | -1.69E-46 |
| MS.gene053726 | MS.gene28820 | 0.82854 | 8.49E-55 | -1.69E-46 |
| MS.gene053879 | MS.gene28820 | 0.836505 | 9.00E-57 | -1.69E-46 |
| MS.gene053931 | MS.gene28820 | 0.822128 | 2.80E-53 | -1.69E-46 |
| MS.gene054004 | MS.gene28820 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene28820 | 0.819663 | 1.03E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene28820 | 0.834365 | 3.13E-56 | -1.69E-46 |
| MS.gene054479 | MS.gene28820 | 0.801248 | 9.85E-49 | -1.69E-46 |
| MS.gene054709 | MS.gene28820 | 0.803225 | 3.86E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene28820 | 0.851462 | 8.74E-61 | -1.69E-46 |
| MS.gene054893 | MS.gene28820 | 0.85521 | 7.35E-62 | -1.69E-46 |
| MS.gene05517 | MS.gene28820 | 0.809627 | 1.72E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene28820 | 0.809231 | 2.10E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene28820 | 0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene28820 | 0.818774 | 1.64E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene28820 | 0.834951 | 2.23E-56 | -1.69E-46 |
| MS.gene056097 | MS.gene28820 | 0.855169 | 7.56E-62 | -1.69E-46 |
| MS.gene056181 | MS.gene28820 | 0.84982 | 2.53E-60 | -1.69E-46 |
| MS.gene056699 | MS.gene28820 | 0.809314 | 2.01E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene28820 | 0.807308 | 5.39E-50 | -1.69E-46 |
| MS.gene056831 | MS.gene28820 | 0.80903 | 2.31E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene28820 | 0.819307 | 1.24E-52 | -1.69E-46 |
| MS.gene057174 | MS.gene28820 | 0.808369 | 3.20E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene28820 | 0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene057371 | MS.gene28820 | 0.807438 | 5.05E-50 | -1.69E-46 |
| MS.gene057622 | MS.gene28820 | 0.843413 | 1.42E-58 | -1.69E-46 |
| MS.gene05781 | MS.gene28820 | 0.818333 | 2.07E-52 | -1.69E-46 |
| MS.gene057890 | MS.gene28820 | -0.804964 | 1.68E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene28820 | 0.807139 | 5.85E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene28820 | 0.83457 | 2.78E-56 | -1.69E-46 |
| MS.gene058054 | MS.gene28820 | 0.809394 | 1.93E-50 | -1.69E-46 |
| MS.gene058159 | MS.gene28820 | 0.840898 | 6.59E-58 | -1.69E-46 |
| MS.gene058261 | MS.gene28820 | 0.845916 | 3.01E-59 | -1.69E-46 |
| MS.gene058292 | MS.gene28820 | 0.824423 | 8.14E-54 | -1.69E-46 |
| MS.gene058429 | MS.gene28820 | 0.826622 | 2.45E-54 | -1.69E-46 |
| MS.gene059007 | MS.gene28820 | 0.860888 | 1.51E-63 | -1.69E-46 |
| MS.gene059146 | MS.gene28820 | 0.838478 | 2.81E-57 | -1.69E-46 |
| MS.gene059170 | MS.gene28820 | 0.823945 | 1.05E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene28820 | -0.804554 | 2.04E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene28820 | 0.816776 | 4.64E-52 | -1.69E-46 |
| MS.gene060244 | MS.gene28820 | 0.80693 | 6.48E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene28820 | 0.854435 | 1.23E-61 | -1.69E-46 |
| MS.gene060435 | MS.gene28820 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene060763 | MS.gene28820 | 0.80325 | 3.81E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene28820 | 0.823678 | 1.22E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene28820 | 0.846036 | 2.79E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene28820 | 0.819434 | 1.16E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene28820 | 0.83848 | 2.81E-57 | -1.69E-46 |
| MS.gene061006 | MS.gene28820 | 0.805501 | 1.29E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene28820 | 0.839455 | 1.57E-57 | -1.69E-46 |
| MS.gene061160 | MS.gene28820 | 0.801089 | 1.06E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28820 | MS.gene065924 | PPI |
| MS.gene40685 | MS.gene28820 | PPI |
| MS.gene041682 | MS.gene28820 | PPI |
| MS.gene28820 | MS.gene069676 | PPI |
| MS.gene056665 | MS.gene28820 | PPI |
| MS.gene28820 | MS.gene27391 | PPI |
| MS.gene45720 | MS.gene28820 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28820.t1 | MTR_7g109720 | 98.072 | 778 | 11 | 2 | 1 | 777 | 1 | 775 | 0.0 | 1556 |
| MS.gene28820.t1 | MTR_2g007000 | 45.276 | 561 | 273 | 8 | 70 | 613 | 341 | 884 | 1.69e-142 | 447 |
| MS.gene28820.t1 | MTR_2g100230 | 49.652 | 431 | 213 | 4 | 181 | 609 | 42 | 470 | 4.18e-138 | 417 |
| MS.gene28820.t1 | MTR_4g105100 | 50.117 | 427 | 210 | 3 | 192 | 617 | 160 | 584 | 2.01e-137 | 420 |
| MS.gene28820.t1 | MTR_4g105100 | 49.315 | 365 | 183 | 2 | 192 | 555 | 160 | 523 | 2.22e-114 | 357 |
| MS.gene28820.t1 | MTR_6g005550 | 43.187 | 433 | 228 | 7 | 215 | 644 | 146 | 563 | 7.95e-109 | 348 |
| MS.gene28820.t1 | MTR_2g032630 | 43.961 | 414 | 218 | 7 | 211 | 615 | 467 | 875 | 1.06e-104 | 348 |
| MS.gene28820.t1 | MTR_3g467550 | 41.687 | 403 | 220 | 5 | 198 | 587 | 77 | 477 | 3.41e-103 | 328 |
| MS.gene28820.t1 | MTR_4g134170 | 40.783 | 434 | 234 | 6 | 196 | 609 | 249 | 679 | 1.87e-101 | 328 |
| MS.gene28820.t1 | MTR_6g005320 | 40.783 | 434 | 232 | 7 | 196 | 609 | 211 | 639 | 5.20e-100 | 323 |
| MS.gene28820.t1 | MTR_1g054630 | 40.295 | 474 | 247 | 9 | 192 | 646 | 114 | 570 | 4.52e-98 | 317 |
| MS.gene28820.t1 | MTR_3g467550 | 44.167 | 360 | 190 | 4 | 237 | 587 | 89 | 446 | 9.22e-98 | 313 |
| MS.gene28820.t1 | MTR_3g083690 | 39.400 | 467 | 240 | 9 | 172 | 615 | 94 | 540 | 7.16e-95 | 308 |
| MS.gene28820.t1 | MTR_3g467550 | 41.287 | 373 | 205 | 4 | 198 | 557 | 77 | 448 | 4.35e-94 | 301 |
| MS.gene28820.t1 | MTR_1g095810 | 42.163 | 453 | 239 | 10 | 204 | 643 | 115 | 557 | 7.28e-94 | 305 |
| MS.gene28820.t1 | MTR_1g026830 | 40.166 | 483 | 246 | 11 | 204 | 667 | 117 | 575 | 7.76e-93 | 302 |
| MS.gene28820.t1 | MTR_5g027840 | 43.655 | 394 | 211 | 7 | 224 | 610 | 94 | 483 | 1.14e-92 | 300 |
| MS.gene28820.t1 | MTR_4g114120 | 40.964 | 415 | 225 | 6 | 217 | 613 | 123 | 535 | 1.40e-91 | 301 |
| MS.gene28820.t1 | MTR_7g056830 | 37.190 | 363 | 219 | 6 | 230 | 590 | 6 | 361 | 5.35e-70 | 237 |
| MS.gene28820.t1 | MTR_6g082080 | 36.464 | 362 | 223 | 5 | 230 | 590 | 6 | 361 | 6.31e-70 | 236 |
| MS.gene28820.t1 | MTR_7g100820 | 34.975 | 406 | 251 | 6 | 215 | 615 | 111 | 508 | 4.54e-69 | 239 |
| MS.gene28820.t1 | MTR_4g079320 | 37.017 | 362 | 221 | 6 | 235 | 594 | 20 | 376 | 8.04e-66 | 234 |
| MS.gene28820.t1 | MTR_3g449250 | 36.512 | 367 | 220 | 6 | 225 | 589 | 88 | 443 | 1.15e-64 | 226 |
| MS.gene28820.t1 | MTR_3g449250 | 36.512 | 367 | 220 | 6 | 225 | 589 | 88 | 443 | 3.82e-64 | 225 |
| MS.gene28820.t1 | MTR_3g049990 | 36.387 | 382 | 229 | 6 | 234 | 605 | 152 | 529 | 7.30e-64 | 228 |
| MS.gene28820.t1 | MTR_2g066050 | 36.512 | 367 | 219 | 7 | 234 | 594 | 53 | 411 | 1.98e-62 | 218 |
| MS.gene28820.t1 | MTR_2g438110 | 33.705 | 359 | 221 | 6 | 230 | 583 | 30 | 376 | 1.07e-61 | 213 |
| MS.gene28820.t1 | MTR_2g041140 | 36.292 | 383 | 229 | 7 | 234 | 605 | 141 | 519 | 1.68e-61 | 221 |
| MS.gene28820.t1 | MTR_5g090120 | 35.422 | 367 | 224 | 6 | 225 | 589 | 79 | 434 | 3.52e-61 | 217 |
| MS.gene28820.t1 | MTR_2g099620 | 34.530 | 362 | 230 | 4 | 233 | 594 | 24 | 378 | 4.20e-61 | 211 |
| MS.gene28820.t1 | MTR_2g099620 | 34.530 | 362 | 230 | 4 | 233 | 594 | 40 | 394 | 6.50e-61 | 211 |
| MS.gene28820.t1 | MTR_8g018400 | 34.072 | 361 | 231 | 4 | 234 | 594 | 41 | 394 | 1.25e-59 | 208 |
| MS.gene28820.t1 | MTR_2g039960 | 33.795 | 361 | 232 | 4 | 234 | 594 | 41 | 394 | 1.65e-58 | 205 |
| MS.gene28820.t1 | MTR_4g125970 | 34.930 | 355 | 222 | 6 | 234 | 587 | 41 | 387 | 1.77e-58 | 205 |
| MS.gene28820.t1 | MTR_4g125970 | 34.930 | 355 | 222 | 6 | 234 | 587 | 58 | 404 | 3.70e-58 | 204 |
| MS.gene28820.t1 | MTR_6g033070 | 30.549 | 419 | 274 | 8 | 201 | 611 | 109 | 518 | 1.61e-57 | 206 |
| MS.gene28820.t1 | MTR_8g027770 | 36.119 | 371 | 219 | 11 | 235 | 590 | 202 | 569 | 1.04e-52 | 194 |
| MS.gene28820.t1 | MTR_6g056080 | 33.594 | 384 | 217 | 11 | 223 | 591 | 104 | 464 | 1.70e-52 | 194 |
| MS.gene28820.t1 | MTR_8g027775 | 35.135 | 370 | 224 | 11 | 235 | 590 | 103 | 470 | 1.13e-51 | 190 |
| MS.gene28820.t1 | MTR_7g076830 | 31.373 | 357 | 233 | 7 | 235 | 590 | 144 | 489 | 3.43e-51 | 187 |
| MS.gene28820.t1 | MTR_7g076800 | 31.373 | 357 | 233 | 7 | 235 | 590 | 142 | 487 | 5.04e-51 | 187 |
| MS.gene28820.t1 | MTR_8g027780 | 34.595 | 370 | 226 | 12 | 235 | 590 | 107 | 474 | 5.78e-51 | 188 |
| MS.gene28820.t1 | MTR_7g076820 | 31.092 | 357 | 234 | 7 | 235 | 590 | 151 | 496 | 1.76e-50 | 185 |
| MS.gene28820.t1 | MTR_1g083130 | 30.216 | 417 | 242 | 8 | 233 | 604 | 25 | 437 | 4.01e-50 | 186 |
| MS.gene28820.t1 | MTR_4g112340 | 34.181 | 354 | 224 | 6 | 247 | 594 | 110 | 460 | 5.25e-50 | 185 |
| MS.gene28820.t1 | MTR_8g097000 | 34.225 | 374 | 230 | 10 | 235 | 594 | 289 | 660 | 1.84e-49 | 186 |
| MS.gene28820.t1 | MTR_3g107420 | 30.704 | 355 | 232 | 8 | 235 | 584 | 48 | 393 | 1.38e-48 | 177 |
| MS.gene28820.t1 | MTR_1g012420 | 30.423 | 355 | 233 | 8 | 235 | 584 | 48 | 393 | 3.10e-48 | 177 |
| MS.gene28820.t1 | MTR_7g057250 | 32.564 | 433 | 210 | 14 | 235 | 592 | 164 | 589 | 3.66e-48 | 183 |
| MS.gene28820.t1 | MTR_3g071620 | 32.609 | 368 | 227 | 7 | 244 | 591 | 26 | 392 | 1.03e-47 | 179 |
| MS.gene28820.t1 | MTR_4g010565 | 31.564 | 358 | 225 | 10 | 235 | 584 | 125 | 470 | 1.16e-47 | 177 |
| MS.gene28820.t1 | MTR_6g039840 | 30.688 | 378 | 245 | 7 | 232 | 594 | 108 | 483 | 1.17e-47 | 180 |
| MS.gene28820.t1 | MTR_5g092560 | 37.578 | 322 | 190 | 8 | 257 | 571 | 99 | 416 | 1.10e-46 | 178 |
| MS.gene28820.t1 | MTR_2g055850 | 31.680 | 363 | 240 | 5 | 233 | 590 | 90 | 449 | 1.35e-46 | 175 |
| MS.gene28820.t1 | MTR_1g102410 | 31.026 | 390 | 217 | 11 | 223 | 582 | 45 | 412 | 7.35e-46 | 174 |
| MS.gene28820.t1 | MTR_4g059460 | 29.567 | 416 | 218 | 13 | 234 | 575 | 44 | 458 | 6.24e-45 | 171 |
| MS.gene28820.t1 | MTR_4g068990 | 36.137 | 321 | 195 | 8 | 257 | 571 | 99 | 415 | 8.10e-45 | 172 |
| MS.gene28820.t1 | MTR_2g043360 | 29.087 | 416 | 220 | 13 | 234 | 575 | 41 | 455 | 8.02e-44 | 168 |
| MS.gene28820.t1 | MTR_8g027780 | 33.721 | 344 | 210 | 12 | 235 | 564 | 107 | 446 | 1.07e-43 | 164 |
| MS.gene28820.t1 | MTR_2g063080 | 28.873 | 426 | 243 | 8 | 229 | 598 | 104 | 525 | 2.19e-40 | 157 |
| MS.gene28820.t1 | MTR_1g061970 | 29.630 | 378 | 232 | 12 | 234 | 584 | 80 | 450 | 4.01e-39 | 152 |
| MS.gene28820.t1 | MTR_5g069330 | 26.512 | 430 | 286 | 12 | 232 | 648 | 5 | 417 | 4.36e-38 | 147 |
| MS.gene28820.t1 | MTR_5g069330 | 26.512 | 430 | 286 | 12 | 232 | 648 | 1 | 413 | 5.38e-38 | 147 |
| MS.gene28820.t1 | MTR_3g118120 | 27.110 | 391 | 257 | 9 | 232 | 595 | 130 | 519 | 5.50e-36 | 144 |
| MS.gene28820.t1 | MTR_4g049910 | 28.232 | 379 | 244 | 9 | 224 | 586 | 45 | 411 | 9.72e-35 | 138 |
| MS.gene28820.t1 | MTR_0915s0010 | 29.066 | 289 | 195 | 5 | 248 | 535 | 3 | 282 | 1.47e-32 | 128 |
| MS.gene28820.t1 | MTR_4g112320 | 31.338 | 284 | 184 | 6 | 315 | 594 | 2 | 278 | 2.11e-31 | 127 |
| MS.gene28820.t1 | MTR_6g039840 | 29.373 | 303 | 201 | 6 | 303 | 594 | 7 | 307 | 4.20e-30 | 125 |
| MS.gene28820.t1 | MTR_4g459350 | 33.023 | 215 | 122 | 6 | 234 | 426 | 41 | 255 | 7.92e-30 | 120 |
| MS.gene28820.t1 | MTR_4g077370 | 36.683 | 199 | 118 | 3 | 234 | 429 | 250 | 443 | 2.40e-29 | 122 |
| MS.gene28820.t1 | MTR_4g077370 | 36.946 | 203 | 95 | 8 | 234 | 428 | 2 | 179 | 1.95e-23 | 104 |
| MS.gene28820.t1 | MTR_8g032230 | 36.943 | 157 | 94 | 2 | 230 | 385 | 6 | 158 | 2.73e-28 | 112 |
| MS.gene28820.t1 | MTR_1g046570 | 25.995 | 377 | 229 | 8 | 251 | 588 | 8 | 373 | 7.45e-28 | 117 |
| MS.gene28820.t1 | MTR_8g018370 | 27.059 | 340 | 204 | 11 | 263 | 594 | 2 | 305 | 1.58e-27 | 114 |
| MS.gene28820.t1 | MTR_5g092560 | 40.206 | 194 | 107 | 6 | 384 | 571 | 15 | 205 | 3.56e-27 | 117 |
| MS.gene28820.t1 | MTR_1g022305 | 24.941 | 425 | 242 | 12 | 232 | 649 | 1 | 355 | 3.22e-26 | 113 |
| MS.gene28820.t1 | MTR_2g043360 | 27.545 | 334 | 168 | 11 | 313 | 575 | 7 | 337 | 4.13e-26 | 113 |
| MS.gene28820.t1 | MTR_3g107420 | 32.850 | 207 | 129 | 5 | 235 | 437 | 48 | 248 | 7.19e-26 | 109 |
| MS.gene28820.t1 | MTR_4g068990 | 37.824 | 193 | 112 | 6 | 384 | 571 | 15 | 204 | 9.10e-25 | 109 |
| MS.gene28820.t1 | MTR_5g077690 | 23.604 | 394 | 221 | 8 | 271 | 595 | 70 | 452 | 8.99e-24 | 106 |
| MS.gene28820.t1 | MTR_4g131750 | 27.696 | 408 | 242 | 17 | 228 | 594 | 76 | 471 | 1.59e-21 | 99.4 |
| MS.gene28820.t1 | MTR_2g042440 | 25.150 | 334 | 219 | 9 | 252 | 571 | 39 | 355 | 6.14e-18 | 89.0 |
| MS.gene28820.t1 | MTR_2g042440 | 25.150 | 334 | 219 | 9 | 252 | 571 | 39 | 355 | 6.31e-18 | 89.0 |
| MS.gene28820.t1 | MTR_2g031570 | 43.939 | 66 | 37 | 0 | 234 | 299 | 72 | 137 | 3.70e-13 | 67.8 |
| MS.gene28820.t1 | MTR_1g050730 | 23.380 | 355 | 252 | 12 | 269 | 612 | 175 | 520 | 7.31e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28820.t1 | AT2G47330 | 77.506 | 778 | 154 | 10 | 1 | 776 | 1 | 759 | 0.0 | 1138 |
| MS.gene28820.t1 | AT1G20920 | 44.007 | 584 | 299 | 11 | 69 | 642 | 30 | 595 | 3.40e-144 | 444 |
| MS.gene28820.t1 | AT5G63120 | 51.659 | 422 | 201 | 3 | 193 | 613 | 125 | 544 | 2.36e-142 | 432 |
| MS.gene28820.t1 | AT1G20920 | 44.505 | 555 | 286 | 8 | 69 | 613 | 368 | 910 | 1.21e-141 | 447 |
| MS.gene28820.t1 | AT1G20920 | 44.505 | 555 | 286 | 8 | 69 | 613 | 368 | 910 | 1.21e-141 | 447 |
| MS.gene28820.t1 | AT1G20920 | 44.505 | 555 | 286 | 8 | 69 | 613 | 368 | 910 | 1.21e-141 | 447 |
| MS.gene28820.t1 | AT1G20920 | 44.505 | 555 | 286 | 8 | 69 | 613 | 368 | 910 | 1.21e-141 | 447 |
| MS.gene28820.t1 | AT1G20920 | 44.505 | 555 | 286 | 8 | 69 | 613 | 368 | 910 | 1.21e-141 | 447 |
| MS.gene28820.t1 | AT1G20920 | 44.505 | 555 | 286 | 8 | 69 | 613 | 368 | 910 | 1.21e-141 | 447 |
| MS.gene28820.t1 | AT1G55150 | 49.526 | 422 | 210 | 3 | 192 | 612 | 58 | 477 | 8.34e-138 | 417 |
| MS.gene28820.t1 | AT1G55150 | 49.526 | 422 | 210 | 3 | 192 | 612 | 83 | 502 | 7.85e-137 | 415 |
| MS.gene28820.t1 | AT3G09620 | 43.920 | 551 | 262 | 9 | 69 | 613 | 239 | 748 | 6.94e-130 | 411 |
| MS.gene28820.t1 | AT3G09620 | 43.920 | 551 | 262 | 9 | 69 | 613 | 240 | 749 | 7.48e-130 | 411 |
| MS.gene28820.t1 | AT5G63120 | 51.852 | 351 | 167 | 2 | 193 | 542 | 125 | 474 | 1.14e-118 | 367 |
| MS.gene28820.t1 | AT5G63120 | 51.852 | 351 | 167 | 2 | 193 | 542 | 125 | 474 | 1.46e-118 | 366 |
| MS.gene28820.t1 | AT5G63120 | 51.852 | 351 | 167 | 2 | 193 | 542 | 125 | 474 | 1.46e-118 | 366 |
| MS.gene28820.t1 | AT5G63120 | 51.852 | 351 | 167 | 2 | 193 | 542 | 125 | 474 | 1.46e-118 | 366 |
| MS.gene28820.t1 | AT5G14610 | 42.344 | 418 | 235 | 5 | 202 | 617 | 130 | 543 | 7.72e-106 | 338 |
| MS.gene28820.t1 | AT5G14610 | 42.344 | 418 | 235 | 5 | 202 | 617 | 130 | 543 | 8.26e-106 | 338 |
| MS.gene28820.t1 | AT5G14610 | 42.344 | 418 | 235 | 5 | 202 | 617 | 138 | 551 | 1.34e-105 | 338 |
| MS.gene28820.t1 | AT3G01540 | 42.143 | 420 | 233 | 7 | 202 | 617 | 127 | 540 | 1.15e-104 | 334 |
| MS.gene28820.t1 | AT3G01540 | 42.143 | 420 | 233 | 7 | 202 | 617 | 127 | 540 | 1.34e-104 | 334 |
| MS.gene28820.t1 | AT3G01540 | 42.143 | 420 | 233 | 7 | 202 | 617 | 127 | 540 | 1.34e-104 | 334 |
| MS.gene28820.t1 | AT3G01540 | 42.143 | 420 | 233 | 7 | 202 | 617 | 127 | 540 | 1.34e-104 | 334 |
| MS.gene28820.t1 | AT3G06480 | 42.689 | 424 | 233 | 7 | 195 | 615 | 399 | 815 | 2.65e-104 | 345 |
| MS.gene28820.t1 | AT2G33730 | 41.784 | 426 | 225 | 6 | 204 | 609 | 284 | 706 | 5.79e-102 | 331 |
| MS.gene28820.t1 | AT2G42520 | 42.478 | 452 | 236 | 7 | 183 | 615 | 108 | 554 | 1.12e-101 | 327 |
| MS.gene28820.t1 | AT2G42520 | 42.478 | 452 | 236 | 7 | 183 | 615 | 108 | 554 | 1.12e-101 | 327 |
| MS.gene28820.t1 | AT2G42520 | 42.478 | 452 | 236 | 7 | 183 | 615 | 108 | 554 | 1.12e-101 | 327 |
| MS.gene28820.t1 | AT3G58510 | 41.333 | 450 | 241 | 8 | 183 | 615 | 101 | 544 | 1.21e-98 | 318 |
| MS.gene28820.t1 | AT3G58510 | 41.333 | 450 | 241 | 8 | 183 | 615 | 101 | 544 | 1.21e-98 | 318 |
| MS.gene28820.t1 | AT3G58510 | 41.333 | 450 | 241 | 8 | 183 | 615 | 101 | 544 | 1.21e-98 | 318 |
| MS.gene28820.t1 | AT5G14610 | 43.817 | 372 | 203 | 5 | 248 | 617 | 45 | 412 | 8.31e-97 | 310 |
| MS.gene28820.t1 | AT5G14610 | 43.817 | 372 | 203 | 5 | 248 | 617 | 45 | 412 | 8.31e-97 | 310 |
| MS.gene28820.t1 | AT5G14610 | 43.817 | 372 | 203 | 5 | 248 | 617 | 244 | 611 | 1.26e-96 | 316 |
| MS.gene28820.t1 | AT3G58570 | 40.222 | 450 | 248 | 9 | 183 | 615 | 96 | 541 | 5.37e-96 | 312 |
| MS.gene28820.t1 | AT5G51280 | 40.798 | 451 | 248 | 8 | 204 | 643 | 117 | 559 | 5.46e-93 | 303 |
| MS.gene28820.t1 | AT4G33370 | 37.910 | 488 | 285 | 8 | 173 | 650 | 38 | 517 | 7.31e-92 | 298 |
| MS.gene28820.t1 | AT1G31970 | 41.604 | 399 | 221 | 7 | 232 | 622 | 115 | 509 | 1.49e-87 | 287 |
| MS.gene28820.t1 | AT5G14610 | 42.693 | 349 | 195 | 4 | 202 | 548 | 138 | 483 | 4.08e-87 | 285 |
| MS.gene28820.t1 | AT3G06480 | 43.213 | 361 | 194 | 7 | 195 | 551 | 399 | 752 | 8.41e-86 | 288 |
| MS.gene28820.t1 | AT1G28180 | 44.785 | 326 | 171 | 5 | 263 | 584 | 3 | 323 | 3.02e-81 | 265 |
| MS.gene28820.t1 | AT3G09720 | 34.615 | 416 | 258 | 8 | 216 | 625 | 120 | 527 | 2.98e-71 | 243 |
| MS.gene28820.t1 | AT3G09720 | 34.615 | 416 | 258 | 8 | 216 | 625 | 120 | 527 | 2.98e-71 | 243 |
| MS.gene28820.t1 | AT5G60990 | 34.688 | 369 | 226 | 6 | 232 | 590 | 8 | 371 | 1.28e-66 | 228 |
| MS.gene28820.t1 | AT1G16280 | 36.885 | 366 | 217 | 7 | 235 | 594 | 60 | 417 | 4.62e-65 | 225 |
| MS.gene28820.t1 | AT1G77030 | 36.957 | 368 | 213 | 8 | 235 | 594 | 30 | 386 | 4.07e-64 | 230 |
| MS.gene28820.t1 | AT3G22330 | 35.775 | 355 | 222 | 5 | 237 | 589 | 108 | 458 | 6.90e-63 | 222 |
| MS.gene28820.t1 | AT3G02065 | 31.435 | 439 | 278 | 9 | 197 | 623 | 75 | 502 | 2.81e-62 | 218 |
| MS.gene28820.t1 | AT3G02065 | 31.435 | 439 | 278 | 9 | 197 | 623 | 75 | 502 | 2.81e-62 | 218 |
| MS.gene28820.t1 | AT3G13920 | 35.278 | 360 | 220 | 5 | 233 | 589 | 39 | 388 | 3.66e-62 | 215 |
| MS.gene28820.t1 | AT3G13920 | 35.278 | 360 | 220 | 5 | 233 | 589 | 29 | 378 | 4.89e-62 | 214 |
| MS.gene28820.t1 | AT3G13920 | 35.278 | 360 | 220 | 5 | 233 | 589 | 43 | 392 | 5.72e-62 | 214 |
| MS.gene28820.t1 | AT3G13920 | 35.278 | 360 | 220 | 5 | 233 | 589 | 39 | 388 | 7.91e-62 | 214 |
| MS.gene28820.t1 | AT4G16630 | 36.544 | 353 | 219 | 4 | 234 | 584 | 168 | 517 | 9.77e-62 | 223 |
| MS.gene28820.t1 | AT3G19760 | 32.213 | 357 | 229 | 5 | 230 | 583 | 32 | 378 | 3.39e-61 | 212 |
| MS.gene28820.t1 | AT1G54270 | 35.278 | 360 | 220 | 5 | 233 | 589 | 39 | 388 | 3.57e-61 | 212 |
| MS.gene28820.t1 | AT3G22310 | 36.415 | 357 | 217 | 7 | 237 | 589 | 120 | 470 | 7.63e-61 | 216 |
| MS.gene28820.t1 | AT3G22310 | 36.415 | 357 | 217 | 7 | 237 | 589 | 120 | 470 | 1.02e-60 | 216 |
| MS.gene28820.t1 | AT3G13920 | 36.257 | 342 | 205 | 5 | 251 | 589 | 52 | 383 | 1.61e-60 | 210 |
| MS.gene28820.t1 | AT1G54270 | 36.257 | 342 | 205 | 5 | 251 | 589 | 52 | 383 | 1.41e-59 | 207 |
| MS.gene28820.t1 | AT5G26742 | 38.462 | 351 | 202 | 7 | 247 | 589 | 116 | 460 | 1.62e-59 | 215 |
| MS.gene28820.t1 | AT5G26742 | 38.462 | 351 | 202 | 7 | 247 | 589 | 116 | 460 | 1.65e-59 | 215 |
| MS.gene28820.t1 | AT1G51380 | 33.148 | 359 | 223 | 6 | 230 | 583 | 19 | 365 | 2.55e-59 | 206 |
| MS.gene28820.t1 | AT1G72730 | 33.241 | 361 | 234 | 4 | 234 | 594 | 42 | 395 | 2.63e-58 | 204 |
| MS.gene28820.t1 | AT5G26742 | 39.394 | 330 | 186 | 7 | 268 | 589 | 44 | 367 | 6.08e-58 | 209 |
| MS.gene28820.t1 | AT4G00660 | 31.653 | 357 | 232 | 7 | 235 | 590 | 133 | 478 | 6.01e-54 | 195 |
| MS.gene28820.t1 | AT4G00660 | 31.653 | 357 | 232 | 7 | 235 | 590 | 133 | 478 | 6.01e-54 | 195 |
| MS.gene28820.t1 | AT5G65900 | 34.254 | 362 | 231 | 6 | 233 | 590 | 154 | 512 | 9.70e-53 | 194 |
| MS.gene28820.t1 | AT3G18600 | 33.889 | 360 | 232 | 5 | 234 | 590 | 90 | 446 | 3.06e-52 | 191 |
| MS.gene28820.t1 | AT5G62190 | 36.103 | 349 | 199 | 9 | 248 | 582 | 111 | 449 | 5.50e-50 | 187 |
| MS.gene28820.t1 | AT5G08610 | 33.693 | 371 | 228 | 11 | 235 | 590 | 384 | 751 | 1.01e-49 | 188 |
| MS.gene28820.t1 | AT5G63630 | 33.155 | 374 | 234 | 8 | 235 | 594 | 250 | 621 | 4.04e-49 | 185 |
| MS.gene28820.t1 | AT3G61240 | 29.494 | 356 | 241 | 6 | 235 | 590 | 126 | 471 | 4.80e-49 | 181 |
| MS.gene28820.t1 | AT3G61240 | 29.494 | 356 | 241 | 6 | 235 | 590 | 126 | 471 | 4.80e-49 | 181 |
| MS.gene28820.t1 | AT2G45810 | 30.337 | 356 | 238 | 7 | 235 | 590 | 156 | 501 | 5.16e-49 | 181 |
| MS.gene28820.t1 | AT5G63630 | 33.155 | 374 | 234 | 8 | 235 | 594 | 56 | 427 | 1.01e-48 | 180 |
| MS.gene28820.t1 | AT3G02065 | 30.108 | 372 | 242 | 7 | 262 | 623 | 2 | 365 | 7.25e-48 | 174 |
| MS.gene28820.t1 | AT3G53110 | 31.507 | 365 | 229 | 8 | 235 | 583 | 93 | 452 | 1.34e-47 | 177 |
| MS.gene28820.t1 | AT5G11170 | 31.268 | 355 | 228 | 9 | 235 | 583 | 48 | 392 | 3.01e-47 | 174 |
| MS.gene28820.t1 | AT5G11200 | 31.268 | 355 | 228 | 9 | 235 | 583 | 48 | 392 | 3.01e-47 | 174 |
| MS.gene28820.t1 | AT4G34910 | 33.248 | 391 | 204 | 8 | 233 | 572 | 46 | 430 | 3.64e-47 | 178 |
| MS.gene28820.t1 | AT4G09730 | 32.208 | 385 | 234 | 10 | 230 | 594 | 109 | 486 | 6.57e-47 | 177 |
| MS.gene28820.t1 | AT1G63250 | 32.626 | 377 | 237 | 9 | 233 | 594 | 328 | 702 | 1.08e-45 | 176 |
| MS.gene28820.t1 | AT5G08620 | 33.243 | 370 | 231 | 10 | 235 | 590 | 82 | 449 | 1.22e-45 | 172 |
| MS.gene28820.t1 | AT2G07750 | 32.626 | 377 | 237 | 9 | 233 | 594 | 375 | 749 | 1.38e-45 | 176 |
| MS.gene28820.t1 | AT5G54910 | 35.260 | 346 | 214 | 8 | 232 | 571 | 70 | 411 | 7.17e-45 | 173 |
| MS.gene28820.t1 | AT2G40700 | 30.159 | 441 | 222 | 15 | 234 | 594 | 31 | 465 | 8.09e-44 | 168 |
| MS.gene28820.t1 | AT1G71370 | 33.241 | 361 | 222 | 7 | 244 | 591 | 27 | 381 | 2.49e-43 | 166 |
| MS.gene28820.t1 | AT5G05450 | 33.151 | 365 | 221 | 9 | 244 | 588 | 27 | 388 | 3.27e-43 | 166 |
| MS.gene28820.t1 | AT5G11200 | 28.499 | 393 | 230 | 10 | 235 | 583 | 48 | 433 | 1.13e-42 | 162 |
| MS.gene28820.t1 | AT1G12770 | 28.928 | 401 | 229 | 8 | 233 | 579 | 110 | 508 | 7.29e-42 | 161 |
| MS.gene28820.t1 | AT1G12770 | 28.928 | 401 | 229 | 8 | 233 | 579 | 110 | 508 | 7.29e-42 | 161 |
| MS.gene28820.t1 | AT3G16840 | 30.807 | 409 | 215 | 11 | 242 | 583 | 199 | 606 | 3.71e-41 | 162 |
| MS.gene28820.t1 | AT3G16840 | 30.807 | 409 | 215 | 11 | 242 | 583 | 200 | 607 | 3.86e-41 | 162 |
| MS.gene28820.t1 | AT5G11200 | 27.737 | 411 | 228 | 12 | 235 | 583 | 48 | 451 | 9.90e-40 | 154 |
| MS.gene28820.t1 | AT5G11170 | 31.447 | 318 | 202 | 9 | 272 | 583 | 2 | 309 | 6.66e-39 | 148 |
| MS.gene28820.t1 | AT3G06980 | 27.229 | 415 | 269 | 10 | 210 | 595 | 351 | 761 | 8.47e-38 | 152 |
| MS.gene28820.t1 | AT1G71280 | 33.225 | 307 | 173 | 7 | 244 | 544 | 28 | 308 | 7.48e-35 | 136 |
| MS.gene28820.t1 | AT1G71280 | 32.704 | 318 | 182 | 7 | 244 | 555 | 28 | 319 | 2.54e-34 | 137 |
| MS.gene28820.t1 | AT1G51380 | 31.855 | 248 | 156 | 4 | 230 | 475 | 19 | 255 | 1.53e-31 | 125 |
| MS.gene28820.t1 | AT1G51380 | 33.645 | 214 | 133 | 3 | 230 | 441 | 19 | 225 | 4.46e-30 | 121 |
| MS.gene28820.t1 | AT1G51380 | 33.645 | 214 | 133 | 3 | 230 | 441 | 19 | 225 | 8.74e-30 | 120 |
| MS.gene28820.t1 | AT1G28180 | 49.138 | 116 | 56 | 1 | 263 | 375 | 3 | 118 | 2.42e-29 | 113 |
| MS.gene28820.t1 | AT4G15850 | 25.561 | 446 | 253 | 12 | 223 | 595 | 15 | 454 | 7.67e-26 | 112 |
| MS.gene28820.t1 | AT5G19210 | 28.058 | 417 | 236 | 17 | 227 | 597 | 68 | 466 | 2.55e-24 | 107 |
| MS.gene28820.t1 | AT1G59990 | 26.383 | 235 | 139 | 8 | 234 | 450 | 81 | 299 | 7.52e-17 | 85.1 |
| MS.gene28820.t1 | AT1G59990 | 26.383 | 235 | 139 | 8 | 234 | 450 | 81 | 299 | 9.89e-17 | 84.7 |
| MS.gene28820.t1 | AT2G28600 | 26.235 | 324 | 209 | 12 | 306 | 616 | 196 | 502 | 6.07e-15 | 79.0 |
Find 185 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTACCGGTTGTGCTTTC+TGG | 0.101108 | 7.4:-5793089 | MS.gene28820:CDS |
| TTGAGGGCGAAGAAGGATTT+AGG | 0.143289 | 7.4:-5793978 | MS.gene28820:CDS |
| TGTTACTGAATCCTTCATTT+TGG | 0.152736 | 7.4:+5790640 | None:intergenic |
| CAACGAAGCTACTCCTAAAT+TGG | 0.189044 | 7.4:+5790679 | None:intergenic |
| TGAGAAATTGCCGTGGCTTC+TGG | 0.210686 | 7.4:-5792490 | MS.gene28820:CDS |
| AGTTTGGCTATTCGGGTATC+AGG | 0.250256 | 7.4:-5793224 | MS.gene28820:CDS |
| CTTTGATATTGCTAAAGATA+TGG | 0.286650 | 7.4:-5792220 | MS.gene28820:CDS |
| CAGGAATGATGTCCCAATTT+AGG | 0.287222 | 7.4:-5790692 | MS.gene28820:CDS |
| ATATGCTTTAGCAAATTTCT+TGG | 0.299619 | 7.4:+5792899 | None:intergenic |
| TGGGTTTGCTCCACAAATTA+TGG | 0.309744 | 7.4:-5793162 | MS.gene28820:CDS |
| CCTTCCTCCTTCTGAAGTTC+AGG | 0.311889 | 7.4:+5792981 | None:intergenic |
| TTCCGCAGGACGGGAGATTC+AGG | 0.312404 | 7.4:-5791061 | MS.gene28820:intron |
| GTTGTTTGATTGTTCTTCTC+TGG | 0.315342 | 7.4:+5794178 | None:intergenic |
| TAGATATAAAGATGATTTAG+AGG | 0.320038 | 7.4:-5794021 | MS.gene28820:CDS |
| ATAGGAAGAGTTTGGCTATT+CGG | 0.322771 | 7.4:-5793232 | MS.gene28820:CDS |
| TCCACTTTCTCCTTCGGCTT+CGG | 0.327604 | 7.4:+5794047 | None:intergenic |
| ATCACCTTGATCAATCATTT+CGG | 0.328986 | 7.4:+5792458 | None:intergenic |
| TATACAATGCCAAGCTTTAC+CGG | 0.334510 | 7.4:-5793102 | MS.gene28820:CDS |
| AATTCCACTAGTCAAAATTC+TGG | 0.335286 | 7.4:-5790495 | MS.gene28820:CDS |
| TAGGAAGAGTTTGGCTATTC+GGG | 0.336769 | 7.4:-5793231 | MS.gene28820:CDS |
| ACACTAGCTGGCTTTGTATC+TGG | 0.337129 | 7.4:-5790588 | MS.gene28820:CDS |
| TCACCTTGATCAATCATTTC+GGG | 0.344876 | 7.4:+5792459 | None:intergenic |
| AAGAAATTTGCTAAAGCATA+TGG | 0.357035 | 7.4:-5792897 | MS.gene28820:CDS |
| CTATCTTCCACTTTCTCCTT+CGG | 0.357308 | 7.4:+5794041 | None:intergenic |
| TGAGGGCGAAGAAGGATTTA+GGG | 0.361115 | 7.4:-5793977 | MS.gene28820:CDS |
| CGATCCATTAGATGCATTCA+TGG | 0.362487 | 7.4:-5794105 | MS.gene28820:CDS |
| CCTTCCATGAATGCATCTAA+TGG | 0.370763 | 7.4:+5794101 | None:intergenic |
| GATGAAATTGAAGCACAATT+AGG | 0.371477 | 7.4:-5792402 | MS.gene28820:CDS |
| GAGGAGTCACCTTCAATATC+AGG | 0.374150 | 7.4:-5793753 | MS.gene28820:intron |
| AGCACGGTTTGCTGGTGAAT+TGG | 0.382223 | 7.4:-5792115 | MS.gene28820:CDS |
| GGTGTGCGCGGAGTGGATTT+TGG | 0.383444 | 7.4:-5790801 | MS.gene28820:CDS |
| ATACGTGTCTCTGCTGTCTA+TGG | 0.389174 | 7.4:-5792873 | MS.gene28820:CDS |
| TTTATAGCACCCATAATTTG+TGG | 0.390337 | 7.4:+5793152 | None:intergenic |
| AGCATGTCTATCAATCTTCC+AGG | 0.392561 | 7.4:+5792786 | None:intergenic |
| AGCAAGATGTAACTGATTAT+AGG | 0.393214 | 7.4:-5793250 | MS.gene28820:CDS |
| CTAGTGGAATTTACAGTTGA+AGG | 0.393513 | 7.4:+5790507 | None:intergenic |
| TTCTTCTTGTCAAGAACAAT+AGG | 0.397551 | 7.4:+5793843 | None:intergenic |
| AAGAGCAAGGTTTGGCGGTC+CGG | 0.397692 | 7.4:+5792648 | None:intergenic |
| GCATCATCTAACGCAGTTCC+AGG | 0.398257 | 7.4:-5790744 | MS.gene28820:CDS |
| GGCATAGCGAAAACTGGTTC+TGG | 0.399093 | 7.4:-5793053 | MS.gene28820:CDS |
| GAATGTGTCCACGGAGTTGA+TGG | 0.406543 | 7.4:-5792067 | MS.gene28820:CDS |
| GCTGATCGAATGTTTGATCT+TGG | 0.409409 | 7.4:-5792711 | MS.gene28820:CDS |
| ATCATTGGCATAGCGAAAAC+TGG | 0.412683 | 7.4:-5793059 | MS.gene28820:CDS |
| AAGTTCGGATTCGAAGGTTT+CGG | 0.413016 | 7.4:-5794335 | MS.gene28820:CDS |
| TCTCCCACTGTCACTCTGAT+AGG | 0.413022 | 7.4:+5792570 | None:intergenic |
| GGGTTTGCTCCACAAATTAT+GGG | 0.419490 | 7.4:-5793161 | MS.gene28820:CDS |
| GATGGCCTTCGCCTTTCTCT+AGG | 0.422928 | 7.4:+5790343 | None:intergenic |
| AACTGATTATAGGAAGAGTT+TGG | 0.423334 | 7.4:-5793240 | MS.gene28820:CDS |
| CAGAAGGAGGAAGGTCCTAT+AGG | 0.424404 | 7.4:-5792972 | MS.gene28820:CDS |
| AGAAAAGGCAAAGGCAGAGG+TGG | 0.426446 | 7.4:-5790840 | MS.gene28820:CDS |
| GTTCATCGCATTGGAAGAAC+AGG | 0.434588 | 7.4:-5792189 | MS.gene28820:CDS |
| TTTGTATCTGGTGGATCAAT+TGG | 0.445406 | 7.4:-5790576 | MS.gene28820:CDS |
| TCCTATGATCGTGCATATCA+TGG | 0.445806 | 7.4:-5793009 | MS.gene28820:CDS |
| GCTGTAAATTCTCTGCGAAC+AGG | 0.449877 | 7.4:-5790711 | MS.gene28820:CDS |
| TTGCAGAAAAGAGCAAGGTT+TGG | 0.450948 | 7.4:+5792640 | None:intergenic |
| GTATGATCAAGAGGAGCAAT+AGG | 0.454941 | 7.4:+5793813 | None:intergenic |
| GCTGCTAAAGCCGTGGATGC+TGG | 0.457028 | 7.4:-5793894 | MS.gene28820:CDS |
| TCCATGATATGCACGATCAT+AGG | 0.458040 | 7.4:+5793008 | None:intergenic |
| GTTAATAGCTTAGTTGCTGC+TGG | 0.458763 | 7.4:-5792093 | MS.gene28820:CDS |
| TATCTGATGTGCCAATTCTC+TGG | 0.460585 | 7.4:+5792932 | None:intergenic |
| TTCTCCTTCGGCTTCGGTGG+CGG | 0.461021 | 7.4:+5794053 | None:intergenic |
| ATGTGCACCTACCAGAGAAT+TGG | 0.464889 | 7.4:-5792943 | MS.gene28820:CDS |
| AGAGAAAGGCGAAGGCCATC+AGG | 0.465859 | 7.4:-5790340 | MS.gene28820:CDS |
| AACGAAGCTACTCCTAAATT+GGG | 0.473246 | 7.4:+5790680 | None:intergenic |
| CTGGTCAGAACAACACGAAC+AGG | 0.477330 | 7.4:-5790464 | MS.gene28820:intron |
| GGTGCACATATCACTCCTAT+AGG | 0.477608 | 7.4:+5792957 | None:intergenic |
| AAGGCGAAGGCCATCAGGTT+GGG | 0.481451 | 7.4:-5790335 | MS.gene28820:CDS |
| GTTAAGTTACCTGATATTGA+AGG | 0.488917 | 7.4:+5793744 | None:intergenic |
| TGCTGCCCTGCATGGTGATA+AGG | 0.489958 | 7.4:-5792361 | MS.gene28820:CDS |
| ATTGGAAGAACAGGCCGTGC+TGG | 0.490716 | 7.4:-5792180 | MS.gene28820:CDS |
| GAGATGTCGAAGAGAAAGTT+CGG | 0.490965 | 7.4:-5794350 | MS.gene28820:CDS |
| GGGAGAAAAGGCAAAGGCAG+AGG | 0.492204 | 7.4:-5790843 | MS.gene28820:CDS |
| CAAAATTCTGGAGTAAATCC+TGG | 0.496585 | 7.4:-5790483 | MS.gene28820:CDS |
| CTGTTCGTGTTGTTCTGACC+AGG | 0.499100 | 7.4:+5790465 | None:intergenic |
| TTGGATTTGAGCCGCAAGTA+AGG | 0.501136 | 7.4:-5792692 | MS.gene28820:CDS |
| GTTGATGGATCTTGCTATGA+AGG | 0.502001 | 7.4:-5792052 | MS.gene28820:intron |
| CTCTTCACAACCACCACCAC+CGG | 0.502317 | 7.4:+5794136 | None:intergenic |
| AATAAGAGACCAACACTAGC+TGG | 0.504667 | 7.4:-5790600 | MS.gene28820:CDS |
| GTATCTGGTGGATCAATTGG+CGG | 0.505944 | 7.4:-5790573 | MS.gene28820:CDS |
| TTGAGATCGTTCGAAACTAT+AGG | 0.506823 | 7.4:+5794295 | None:intergenic |
| GAATTTACAGTTGAAGGAGC+AGG | 0.508575 | 7.4:+5790513 | None:intergenic |
| TCTCTACCAGAAAGCACAAC+CGG | 0.508638 | 7.4:+5793083 | None:intergenic |
| AAAGGCAAAGGCAGAGGTGG+GGG | 0.509419 | 7.4:-5790837 | MS.gene28820:CDS |
| TTTAGGGTTGACGTTGGCGT+CGG | 0.513585 | 7.4:-5793961 | MS.gene28820:CDS |
| GCGTCGGATGCGTTGCATGC+TGG | 0.516063 | 7.4:-5793945 | MS.gene28820:CDS |
| GAGATAGTTGTTGCTACGCC+TGG | 0.517266 | 7.4:-5792804 | MS.gene28820:CDS |
| CTTTCTGGTAGAGATATCAT+TGG | 0.519087 | 7.4:-5793074 | MS.gene28820:CDS |
| CATCGTACTCGATGTTATCA+AGG | 0.519589 | 7.4:+5794207 | None:intergenic |
| GAAAAGGCAAAGGCAGAGGT+GGG | 0.521254 | 7.4:-5790839 | MS.gene28820:CDS |
| GACAGTGGGAGAGGTGGGGA+TGG | 0.524042 | 7.4:-5792559 | MS.gene28820:CDS |
| AACGATGATAACGCCGGTGG+TGG | 0.525263 | 7.4:-5794149 | MS.gene28820:CDS |
| GACATGCATGTTCATCGCAT+TGG | 0.527240 | 7.4:-5792198 | MS.gene28820:CDS |
| AATACACGAGGAGATGAAAT+CGG | 0.527640 | 7.4:-5794078 | MS.gene28820:CDS |
| GCAAAGTCGAAAAGTTAGCC+AGG | 0.529230 | 7.4:-5792608 | MS.gene28820:CDS |
| TCAAAACGAGATGCAAGAAA+AGG | 0.529472 | 7.4:-5791038 | MS.gene28820:CDS |
| ATTGATCCTTATCACCATGC+AGG | 0.531053 | 7.4:+5792355 | None:intergenic |
| TATCAGAGTGACAGTGGGAG+AGG | 0.534863 | 7.4:-5792568 | MS.gene28820:CDS |
| TAAGGATCAATCTTCTCGTA+TGG | 0.538960 | 7.4:-5792343 | MS.gene28820:CDS |
| CAGAAAAGAGCAAGGTTTGG+CGG | 0.539484 | 7.4:+5792643 | None:intergenic |
| CGAAACTATAGGTAGATTGA+CGG | 0.541969 | 7.4:+5794306 | None:intergenic |
| AGAGTGACAGTGGGAGAGGT+GGG | 0.542580 | 7.4:-5792564 | MS.gene28820:CDS |
| AAAGCACAACCGGTAAAGCT+TGG | 0.543465 | 7.4:+5793093 | None:intergenic |
| AAGAGAAAGTTCGGATTCGA+AGG | 0.543644 | 7.4:-5794341 | MS.gene28820:CDS |
| TCATCAACCTCCCAAAATGA+AGG | 0.545123 | 7.4:-5790651 | MS.gene28820:CDS |
| ACTTTCTCCTTCGGCTTCGG+TGG | 0.546367 | 7.4:+5794050 | None:intergenic |
| ACCGAAGCCGAAGGAGAAAG+TGG | 0.547284 | 7.4:-5794048 | MS.gene28820:CDS |
| ATCAATCAAACCAGCATCCA+CGG | 0.550510 | 7.4:+5793884 | None:intergenic |
| TTACCCGAAATGATTGATCA+AGG | 0.552029 | 7.4:-5792462 | MS.gene28820:CDS |
| GATGATAACGCCGGTGGTGG+TGG | 0.552916 | 7.4:-5794146 | MS.gene28820:CDS |
| CGTTGTCTTCGAAATTGTCG+TGG | 0.555230 | 7.4:+5794231 | None:intergenic |
| CACTGTCACTCTGATAGGAT+CGG | 0.557327 | 7.4:+5792575 | None:intergenic |
| AATGCTCAGAGCAACTTACC+TGG | 0.557941 | 7.4:-5792745 | MS.gene28820:CDS |
| GCTACTGATGTTGCCGCTCG+TGG | 0.558152 | 7.4:-5792276 | MS.gene28820:CDS |
| AAAGGCGAAGGCCATCAGGT+TGG | 0.560748 | 7.4:-5790336 | MS.gene28820:CDS |
| CAGAGTGACAGTGGGAGAGG+TGG | 0.564403 | 7.4:-5792565 | MS.gene28820:CDS |
| AACAGGCCGTGCTGGTGACA+AGG | 0.564433 | 7.4:-5792172 | MS.gene28820:CDS |
| AAAAGGCAAAGGCAGAGGTG+GGG | 0.567265 | 7.4:-5790838 | MS.gene28820:CDS |
| TGGCAAAGGTGTGCGCGGAG+TGG | 0.570105 | 7.4:-5790808 | MS.gene28820:CDS |
| CATTGTTGCAGAAAAGAGCA+AGG | 0.570141 | 7.4:+5792635 | None:intergenic |
| TGATGTGCCAATTCTCTGGT+AGG | 0.570886 | 7.4:+5792936 | None:intergenic |
| TCAATCTCAGTATGATCAAG+AGG | 0.572016 | 7.4:+5793804 | None:intergenic |
| CGTGTCTCTGCTGTCTATGG+TGG | 0.576322 | 7.4:-5792870 | MS.gene28820:CDS |
| TTTAAAGTTGCTGCCCTGCA+TGG | 0.578481 | 7.4:-5792369 | MS.gene28820:CDS |
| GGTAATTTCTCCAGAAGCCA+CGG | 0.578486 | 7.4:+5792480 | None:intergenic |
| GGTCCATCGTTGGTCAGATT+AGG | 0.580274 | 7.4:-5792671 | MS.gene28820:CDS |
| CCATTAGATGCATTCATGGA+AGG | 0.582173 | 7.4:-5794101 | MS.gene28820:CDS |
| GTTTGGCTATTCGGGTATCA+GGG | 0.582805 | 7.4:-5793223 | MS.gene28820:CDS |
| GGATCAGCCTGAACTTCAGA+AGG | 0.585907 | 7.4:-5792988 | MS.gene28820:CDS |
| TGATTTAGAGGATGATCCAA+TGG | 0.586529 | 7.4:-5794009 | MS.gene28820:CDS |
| GGCGCCGCCACCGAAGCCGA+AGG | 0.588262 | 7.4:-5794057 | MS.gene28820:CDS |
| AACTTACCTGGTGCTTGATG+AGG | 0.590884 | 7.4:-5792733 | MS.gene28820:CDS |
| TGTTGTGTAGGTGGGAGAAA+AGG | 0.593082 | 7.4:-5790855 | MS.gene28820:intron |
| CAGTTCAAAGAACTCAAGGC+AGG | 0.593420 | 7.4:-5792831 | MS.gene28820:CDS |
| GCAGGTGGCAAAGGTGTGCG+CGG | 0.596293 | 7.4:-5790813 | MS.gene28820:CDS |
| CATCGTTGGTCAGATTAGGC+CGG | 0.596590 | 7.4:-5792667 | MS.gene28820:CDS |
| CGGTGGTGGTGGTTGTGAAG+AGG | 0.599336 | 7.4:-5794135 | MS.gene28820:CDS |
| AGGATCGGAAAGGATTTCCC+TGG | 0.600410 | 7.4:+5792590 | None:intergenic |
| TTTACAGCAGCAGACCGACC+TGG | 0.602830 | 7.4:+5790726 | None:intergenic |
| GCAGTTCTAAACCTAGAGAA+AGG | 0.605177 | 7.4:-5790354 | MS.gene28820:intron |
| GGCCGTGCTGGTGACAAGGA+CGG | 0.606801 | 7.4:-5792168 | MS.gene28820:CDS |
| CTAGCTGGCTTTGTATCTGG+TGG | 0.609199 | 7.4:-5790585 | MS.gene28820:CDS |
| AGCAATATCAAAGTTTACCA+CGG | 0.609796 | 7.4:+5792230 | None:intergenic |
| GATCAGCCTCATCAAGCACC+AGG | 0.611022 | 7.4:+5792727 | None:intergenic |
| ATTCAGTAACAATACAAGCA+TGG | 0.612947 | 7.4:-5790628 | MS.gene28820:CDS |
| GGCAATTTCTCAGAATCAGA+AGG | 0.613201 | 7.4:+5792501 | None:intergenic |
| AGTAGCAATAAGCACATGGT+AGG | 0.613217 | 7.4:+5792293 | None:intergenic |
| CCTGAACTTCAGAAGGAGGA+AGG | 0.614956 | 7.4:-5792981 | MS.gene28820:CDS |
| TTGATCCTTATCACCATGCA+GGG | 0.615126 | 7.4:+5792356 | None:intergenic |
| TGAACAGTTCAAAGAACTCA+AGG | 0.617345 | 7.4:-5792835 | MS.gene28820:CDS |
| CTGATTCTGAGAAATTGCCG+TGG | 0.618831 | 7.4:-5792497 | MS.gene28820:CDS |
| AACTATCTATCCCAACCTGA+TGG | 0.619017 | 7.4:+5790325 | None:intergenic |
| CGATCCTATCAGAGTGACAG+TGG | 0.622612 | 7.4:-5792574 | MS.gene28820:CDS |
| GAAGGATTTAGGGTTGACGT+TGG | 0.628406 | 7.4:-5793967 | MS.gene28820:CDS |
| CGGCCTAATCTGACCAACGA+TGG | 0.632293 | 7.4:+5792668 | None:intergenic |
| CATCTAACGCAGTTCCAGGT+CGG | 0.632676 | 7.4:-5790740 | MS.gene28820:CDS |
| CATCAGTAGCAATAAGCACA+TGG | 0.632724 | 7.4:+5792289 | None:intergenic |
| CTTGATGTCAAGACCACGAG+CGG | 0.633460 | 7.4:+5792263 | None:intergenic |
| GGAGGAACGTAAAGACGTTG+AGG | 0.634079 | 7.4:+5794269 | None:intergenic |
| TTATGCTGCTGCTAAAGCCG+TGG | 0.635330 | 7.4:-5793901 | MS.gene28820:CDS |
| CTCCGTCCTTGTCACCAGCA+CGG | 0.638268 | 7.4:+5792166 | None:intergenic |
| AAACGAGATGCAAGAAAAGG+AGG | 0.638810 | 7.4:-5791035 | MS.gene28820:intron |
| CAAAGTCGAAAAGTTAGCCA+GGG | 0.638925 | 7.4:-5792607 | MS.gene28820:CDS |
| GATACAAAGCCAGCTAGTGT+TGG | 0.641121 | 7.4:+5790591 | None:intergenic |
| TGCTGGTCAGAATGTGTCCA+CGG | 0.644595 | 7.4:-5792076 | MS.gene28820:CDS |
| TCAGCCTGAACTTCAGAAGG+AGG | 0.650481 | 7.4:-5792985 | MS.gene28820:CDS |
| TCACTCTGATAGGATCGGAA+AGG | 0.651428 | 7.4:+5792580 | None:intergenic |
| CTAAACCTAGAGAAAGGCGA+AGG | 0.655176 | 7.4:-5790348 | MS.gene28820:CDS |
| TGGATATGATTCTGATGAGG+AGG | 0.658341 | 7.4:-5793925 | MS.gene28820:CDS |
| TGCTTCAATTTCATCCACAG+TGG | 0.658468 | 7.4:+5792410 | None:intergenic |
| CCGCAAGTAAGGTCCATCGT+TGG | 0.658844 | 7.4:-5792681 | MS.gene28820:CDS |
| CATCAAGTCAATTAAAACCG+TGG | 0.659638 | 7.4:-5792247 | MS.gene28820:CDS |
| GGCACATCAGATATATCTCG+AGG | 0.663704 | 7.4:-5792922 | MS.gene28820:CDS |
| GCTTGGCATTGTATAGACGT+CGG | 0.665885 | 7.4:+5793110 | None:intergenic |
| GAGTGACAGTGGGAGAGGTG+GGG | 0.667890 | 7.4:-5792563 | MS.gene28820:CDS |
| ATGGGTGCTATAAAGAAACA+AGG | 0.668755 | 7.4:-5793143 | MS.gene28820:CDS |
| AGCAAGATCCATCAACTCCG+TGG | 0.674249 | 7.4:+5792059 | None:intergenic |
| GATCCTATCAGAGTGACAGT+GGG | 0.686740 | 7.4:-5792573 | MS.gene28820:CDS |
| GGAACGTAAAGACGTTGAGG+AGG | 0.696141 | 7.4:+5794272 | None:intergenic |
| AACAACAACGATGATAACGC+CGG | 0.697728 | 7.4:-5794155 | MS.gene28820:CDS |
| TGCTGGATATGATTCTGATG+AGG | 0.699809 | 7.4:-5793928 | MS.gene28820:CDS |
| GAAGCACAATTAGGTCAGAG+AGG | 0.704987 | 7.4:-5792393 | MS.gene28820:CDS |
| CCAACGATGGACCTTACTTG+CGG | 0.706917 | 7.4:+5792681 | None:intergenic |
| AACAACGATGATAACGCCGG+TGG | 0.714203 | 7.4:-5794152 | MS.gene28820:CDS |
| GTAGGTGGGAGAAAAGGCAA+AGG | 0.721472 | 7.4:-5790849 | MS.gene28820:intron |
| ATTCATGGAAGGAATACACG+AGG | 0.768621 | 7.4:-5794090 | MS.gene28820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATATTAATGTATTCAA+TGG | - | chr7.4:5792852-5792871 | MS.gene28820:CDS | 10.0% |
| !! | AACATAAAAATAGAATTTCA+TGG | + | chr7.4:5790960-5790979 | None:intergenic | 15.0% |
| !! | TAAAGAAGTAAAGATTATTA+GGG | + | chr7.4:5793358-5793377 | None:intergenic | 15.0% |
| !!! | ATTTTACAGAAATTTAAATC+TGG | - | chr7.4:5792356-5792375 | MS.gene28820:CDS | 15.0% |
| !!! | TAGTACATATTTTTTTGAAA+TGG | - | chr7.4:5792829-5792848 | MS.gene28820:CDS | 15.0% |
| !! | ATAAGATTTAGATATCTCTT+GGG | - | chr7.4:5793556-5793575 | MS.gene28820:intron | 20.0% |
| !! | ATGAAGAAAAAATACTGTAT+AGG | + | chr7.4:5792657-5792676 | None:intergenic | 20.0% |
| !! | CTAAAGAAGTAAAGATTATT+AGG | + | chr7.4:5793359-5793378 | None:intergenic | 20.0% |
| !! | GATAGAAGTTATATATCTAT+AGG | - | chr7.4:5792920-5792939 | MS.gene28820:CDS | 20.0% |
| !! | TAGATATAAAGATGATTTAG+AGG | - | chr7.4:5790653-5790672 | MS.gene28820:CDS | 20.0% |
| !! | TATAAGATTTAGATATCTCT+TGG | - | chr7.4:5793555-5793574 | MS.gene28820:intron | 20.0% |
| !! | TATATTAATGTATTCAATGG+TGG | - | chr7.4:5792855-5792874 | MS.gene28820:CDS | 20.0% |
| !! | TCATAAAAATCCTTGTTAAA+AGG | + | chr7.4:5790903-5790922 | None:intergenic | 20.0% |
| !! | TGAAGAAAAAATACTGTATA+GGG | + | chr7.4:5792656-5792675 | None:intergenic | 20.0% |
| !!! | ATCTATTTGATTGAACATTT+TGG | - | chr7.4:5793103-5793122 | MS.gene28820:CDS | 20.0% |
| !!! | ATTAAGTTGATTATTCAAAC+AGG | + | chr7.4:5791073-5791092 | None:intergenic | 20.0% |
| !!! | TGAACATTTTGGTAAAATTA+TGG | - | chr7.4:5793114-5793133 | MS.gene28820:CDS | 20.0% |
| !!! | TTAAGTTGATTATTCAAACA+GGG | + | chr7.4:5791072-5791091 | None:intergenic | 20.0% |
| !!! | TTTTAACAAGGATTTTTATG+AGG | - | chr7.4:5790902-5790921 | MS.gene28820:intron | 20.0% |
| ! | ATATGCTTTAGCAAATTTCT+TGG | + | chr7.4:5791778-5791797 | None:intergenic | 25.0% |
| ! | CAAAACCAACAATAATCAAA+GGG | + | chr7.4:5792731-5792750 | None:intergenic | 25.0% |
| ! | CTAAAATATATTTGACTGCT+TGG | - | chr7.4:5793161-5793180 | MS.gene28820:CDS | 25.0% |
| ! | CTTTGATATTGCTAAAGATA+TGG | - | chr7.4:5792454-5792473 | MS.gene28820:CDS | 25.0% |
| ! | GTTTGGATGAGAATAAAATT+AGG | - | chr7.4:5793204-5793223 | MS.gene28820:CDS | 25.0% |
| ! | TATAGTCATAACAAGTCAAA+TGG | + | chr7.4:5793409-5793428 | None:intergenic | 25.0% |
| ! | TTATAACTCAAAAAGAAGCA+CGG | - | chr7.4:5792543-5792562 | MS.gene28820:CDS | 25.0% |
| ! | TTGGTAAAATTATGGTAGAA+TGG | - | chr7.4:5793122-5793141 | MS.gene28820:CDS | 25.0% |
| !! | GGTCGAACTAATATATTTTT+CGG | + | chr7.4:5793388-5793407 | None:intergenic | 25.0% |
| !!! | AAGAAATTTGCTAAAGCATA+TGG | - | chr7.4:5791777-5791796 | MS.gene28820:intron | 25.0% |
| !!! | ATTAGTTTTTGCTTCCAAAA+AGG | - | chr7.4:5792241-5792260 | MS.gene28820:CDS | 25.0% |
| !!! | GCTTTTTTCAAAAGATGAAA+TGG | - | chr7.4:5793001-5793020 | MS.gene28820:CDS | 25.0% |
| !!! | TAAGTTGATTATTCAAACAG+GGG | + | chr7.4:5791071-5791090 | None:intergenic | 25.0% |
| !!! | TAGAATGGACTTGTTTTTTA+GGG | - | chr7.4:5793137-5793156 | MS.gene28820:CDS | 25.0% |
| AACTGATTATAGGAAGAGTT+TGG | - | chr7.4:5791434-5791453 | MS.gene28820:intron | 30.0% | |
| AAGTAAAGATTATTAGGGAG+AGG | + | chr7.4:5793353-5793372 | None:intergenic | 30.0% | |
| AATTCCACTAGTCAAAATTC+TGG | - | chr7.4:5794179-5794198 | MS.gene28820:CDS | 30.0% | |
| AGCAAGATGTAACTGATTAT+AGG | - | chr7.4:5791424-5791443 | MS.gene28820:intron | 30.0% | |
| AGCAATATCAAAGTTTACCA+CGG | + | chr7.4:5792447-5792466 | None:intergenic | 30.0% | |
| ATATCTATAGGTTTGACTGT+TGG | - | chr7.4:5792932-5792951 | MS.gene28820:CDS | 30.0% | |
| ATCACCTTGATCAATCATTT+CGG | + | chr7.4:5792219-5792238 | None:intergenic | 30.0% | |
| ATTCAGTAACAATACAAGCA+TGG | - | chr7.4:5794046-5794065 | MS.gene28820:CDS | 30.0% | |
| CCAAAACCAACAATAATCAA+AGG | + | chr7.4:5792732-5792751 | None:intergenic | 30.0% | |
| GATAGACATGCTAAAAATGA+AGG | - | chr7.4:5791899-5791918 | MS.gene28820:intron | 30.0% | |
| GATGAAATTGAAGCACAATT+AGG | - | chr7.4:5792272-5792291 | MS.gene28820:CDS | 30.0% | |
| GTAATATCAGTATGCTTGAT+TGG | - | chr7.4:5793771-5793790 | MS.gene28820:CDS | 30.0% | |
| GTTAAGTTACCTGATATTGA+AGG | + | chr7.4:5790933-5790952 | None:intergenic | 30.0% | |
| TAAAAACATTTGAGGACTGT+GGG | - | chr7.4:5791493-5791512 | MS.gene28820:intron | 30.0% | |
| TAAGCCAGTAAAAACATTTG+AGG | - | chr7.4:5791485-5791504 | MS.gene28820:intron | 30.0% | |
| TATTGAAAGAGCTAATGATG+TGG | + | chr7.4:5791260-5791279 | None:intergenic | 30.0% | |
| TTACATTTCTTGTGTTGTGT+AGG | - | chr7.4:5793807-5793826 | MS.gene28820:CDS | 30.0% | |
| TTCTTCTTGTCAAGAACAAT+AGG | + | chr7.4:5790834-5790853 | None:intergenic | 30.0% | |
| TTTATAGCACCCATAATTTG+TGG | + | chr7.4:5791525-5791544 | None:intergenic | 30.0% | |
| ! | GTTACTGAATCCTTCATTTT+GGG | + | chr7.4:5794036-5794055 | None:intergenic | 30.0% |
| ! | TGATTATCAGCCTTTTAACA+AGG | - | chr7.4:5790890-5790909 | MS.gene28820:intron | 30.0% |
| ! | TGTGTGTTGATATTTCACAT+GGG | - | chr7.4:5791029-5791048 | MS.gene28820:intron | 30.0% |
| ! | TGTTACTGAATCCTTCATTT+TGG | + | chr7.4:5794037-5794056 | None:intergenic | 30.0% |
| ! | TTTTGCCTGTAAATAGCATA+GGG | + | chr7.4:5792795-5792814 | None:intergenic | 30.0% |
| ! | TTTTTGCCTGTAAATAGCAT+AGG | + | chr7.4:5792796-5792815 | None:intergenic | 30.0% |
| !! | ATGTGGACATTAGTTGTTTT+CGG | + | chr7.4:5791243-5791262 | None:intergenic | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr7.4:5791199-5791218 | MS.gene28820:intron | 30.0% |
| !!! | CCTTTGATTATTGTTGGTTT+TGG | - | chr7.4:5792729-5792748 | MS.gene28820:CDS | 30.0% |
| !!! | GTAGAATGGACTTGTTTTTT+AGG | - | chr7.4:5793136-5793155 | MS.gene28820:CDS | 30.0% |
| !!! | TCAAATGTTTTTACTGGCTT+AGG | + | chr7.4:5791486-5791505 | None:intergenic | 30.0% |
| AAATAGCATAGGGGGATAAA+TGG | + | chr7.4:5792785-5792804 | None:intergenic | 35.0% | |
| AACGAAGCTACTCCTAAATT+GGG | + | chr7.4:5793997-5794016 | None:intergenic | 35.0% | |
| AATACACGAGGAGATGAAAT+CGG | - | chr7.4:5790596-5790615 | MS.gene28820:CDS | 35.0% | |
| AATAGCATAGGGGGATAAAT+GGG | + | chr7.4:5792784-5792803 | None:intergenic | 35.0% | |
| AATTTGTCTTCTAATTCCGC+AGG | - | chr7.4:5793599-5793618 | MS.gene28820:intron | 35.0% | |
| ATAGGAAGAGTTTGGCTATT+CGG | - | chr7.4:5791442-5791461 | MS.gene28820:intron | 35.0% | |
| ATTTATTCGTTCAGGAAGAC+AGG | + | chr7.4:5793029-5793048 | None:intergenic | 35.0% | |
| ATTTCTTGTGTTGTGTAGGT+GGG | - | chr7.4:5793811-5793830 | MS.gene28820:CDS | 35.0% | |
| CAACTTATAACATAGAGGCT+AGG | + | chr7.4:5791347-5791366 | None:intergenic | 35.0% | |
| CATCAAGTCAATTAAAACCG+TGG | - | chr7.4:5792427-5792446 | MS.gene28820:CDS | 35.0% | |
| CGAAACTATAGGTAGATTGA+CGG | + | chr7.4:5790371-5790390 | None:intergenic | 35.0% | |
| CGTATCCCTTTGATTATTGT+TGG | - | chr7.4:5792723-5792742 | MS.gene28820:CDS | 35.0% | |
| CGTCACAATTCATATGTCAT+TGG | - | chr7.4:5793494-5793513 | MS.gene28820:intron | 35.0% | |
| CTAGTGGAATTTACAGTTGA+AGG | + | chr7.4:5794170-5794189 | None:intergenic | 35.0% | |
| GCACTCAACTTATAACATAG+AGG | + | chr7.4:5791352-5791371 | None:intergenic | 35.0% | |
| GTAAAAACATTTGAGGACTG+TGG | - | chr7.4:5791492-5791511 | MS.gene28820:intron | 35.0% | |
| GTCTTCCTGAACGAATAAAT+GGG | - | chr7.4:5793029-5793048 | MS.gene28820:CDS | 35.0% | |
| GTTGTTTGATTGTTCTTCTC+TGG | + | chr7.4:5790499-5790518 | None:intergenic | 35.0% | |
| TAAGGATCAATCTTCTCGTA+TGG | - | chr7.4:5792331-5792350 | MS.gene28820:CDS | 35.0% | |
| TATACAATGCCAAGCTTTAC+CGG | - | chr7.4:5791572-5791591 | MS.gene28820:intron | 35.0% | |
| TCAAAACGAGATGCAAGAAA+AGG | - | chr7.4:5793636-5793655 | MS.gene28820:intron | 35.0% | |
| TCAATCTCAGTATGATCAAG+AGG | + | chr7.4:5790873-5790892 | None:intergenic | 35.0% | |
| TCACCTTGATCAATCATTTC+GGG | + | chr7.4:5792218-5792237 | None:intergenic | 35.0% | |
| TGAACAGTTCAAAGAACTCA+AGG | - | chr7.4:5791839-5791858 | MS.gene28820:intron | 35.0% | |
| TGATTTAGAGGATGATCCAA+TGG | - | chr7.4:5790665-5790684 | MS.gene28820:CDS | 35.0% | |
| TGTCTTCCTGAACGAATAAA+TGG | - | chr7.4:5793028-5793047 | MS.gene28820:CDS | 35.0% | |
| TTACCCGAAATGATTGATCA+AGG | - | chr7.4:5792212-5792231 | MS.gene28820:CDS | 35.0% | |
| TTGAGATCGTTCGAAACTAT+AGG | + | chr7.4:5790382-5790401 | None:intergenic | 35.0% | |
| TTTCAATAAGCTGTCCCTAA+CGG | - | chr7.4:5791272-5791291 | MS.gene28820:intron | 35.0% | |
| TTTGCCTGTAAATAGCATAG+GGG | + | chr7.4:5792794-5792813 | None:intergenic | 35.0% | |
| ! | ATGGGTGCTATAAAGAAACA+AGG | - | chr7.4:5791531-5791550 | MS.gene28820:intron | 35.0% |
| ! | CTTTCTGGTAGAGATATCAT+TGG | - | chr7.4:5791600-5791619 | MS.gene28820:intron | 35.0% |
| ! | GTGTGTGTTGATATTTCACA+TGG | - | chr7.4:5791028-5791047 | MS.gene28820:intron | 35.0% |
| ! | TTATTAGGGAGAGGTTTTTG+TGG | + | chr7.4:5793344-5793363 | None:intergenic | 35.0% |
| ! | TTATTCAAACAGGGGTGTAA+TGG | + | chr7.4:5791063-5791082 | None:intergenic | 35.0% |
| ! | TTTGTATCTGGTGGATCAAT+TGG | - | chr7.4:5794098-5794117 | MS.gene28820:CDS | 35.0% |
| !! | AAGGTTAGTTTCTAAGAAGC+TGG | - | chr7.4:5792880-5792899 | MS.gene28820:CDS | 35.0% |
| !! | AATGTATTCAATGGTGGACA+AGG | - | chr7.4:5792861-5792880 | MS.gene28820:CDS | 35.0% |
| !! | CAAAATTCTGGAGTAAATCC+TGG | - | chr7.4:5794191-5794210 | MS.gene28820:CDS | 35.0% |
| !! | CAGTCCTCAAATGTTTTTAC+TGG | + | chr7.4:5791492-5791511 | None:intergenic | 35.0% |
| !!! | ATCCAATGGAGAGTTTTTTG+AGG | - | chr7.4:5790679-5790698 | MS.gene28820:CDS | 35.0% |
| !!! | TACTCCAGAATTTTGACTAG+TGG | + | chr7.4:5794186-5794205 | None:intergenic | 35.0% |
| !!! | TCCAATGGAGAGTTTTTTGA+GGG | - | chr7.4:5790680-5790699 | MS.gene28820:CDS | 35.0% |
| AAACGAGATGCAAGAAAAGG+AGG | - | chr7.4:5793639-5793658 | MS.gene28820:intron | 40.0% | |
| AACAGCTCGATTAAAACCAG+AGG | + | chr7.4:5793265-5793284 | None:intergenic | 40.0% | |
| AAGAGAAAGTTCGGATTCGA+AGG | - | chr7.4:5790333-5790352 | MS.gene28820:CDS | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | - | chr7.4:5791210-5791229 | MS.gene28820:intron | 40.0% | |
| AAGTTCGGATTCGAAGGTTT+CGG | - | chr7.4:5790339-5790358 | MS.gene28820:CDS | 40.0% | |
| AATAAGAGACCAACACTAGC+TGG | - | chr7.4:5794074-5794093 | MS.gene28820:CDS | 40.0% | |
| ACAGCTCGATTAAAACCAGA+GGG | + | chr7.4:5793264-5793283 | None:intergenic | 40.0% | |
| AGCATGTCTATCAATCTTCC+AGG | + | chr7.4:5791891-5791910 | None:intergenic | 40.0% | |
| AGTAGCAATAAGCACATGGT+AGG | + | chr7.4:5792384-5792403 | None:intergenic | 40.0% | |
| ATCAATCAAACCAGCATCCA+CGG | + | chr7.4:5790793-5790812 | None:intergenic | 40.0% | |
| ATCATTGGCATAGCGAAAAC+TGG | - | chr7.4:5791615-5791634 | MS.gene28820:intron | 40.0% | |
| ATTCATGATGACAACCCAAG+TGG | + | chr7.4:5793321-5793340 | None:intergenic | 40.0% | |
| ATTCATGGAAGGAATACACG+AGG | - | chr7.4:5790584-5790603 | MS.gene28820:CDS | 40.0% | |
| ATTGATCCTTATCACCATGC+AGG | + | chr7.4:5792322-5792341 | None:intergenic | 40.0% | |
| CAAAGTCGAAAAGTTAGCCA+GGG | - | chr7.4:5792067-5792086 | MS.gene28820:CDS | 40.0% | |
| CAACGAAGCTACTCCTAAAT+TGG | + | chr7.4:5793998-5794017 | None:intergenic | 40.0% | |
| CAGGAATGATGTCCCAATTT+AGG | - | chr7.4:5793982-5794001 | MS.gene28820:CDS | 40.0% | |
| CATCAGTAGCAATAAGCACA+TGG | + | chr7.4:5792388-5792407 | None:intergenic | 40.0% | |
| CATCGTACTCGATGTTATCA+AGG | + | chr7.4:5790470-5790489 | None:intergenic | 40.0% | |
| CATTGTTGCAGAAAAGAGCA+AGG | + | chr7.4:5792042-5792061 | None:intergenic | 40.0% | |
| CATTTCTTGTGTTGTGTAGG+TGG | - | chr7.4:5793810-5793829 | MS.gene28820:CDS | 40.0% | |
| CCATTAGATGCATTCATGGA+AGG | - | chr7.4:5790573-5790592 | MS.gene28820:CDS | 40.0% | |
| CCTTCCATGAATGCATCTAA+TGG | + | chr7.4:5790576-5790595 | None:intergenic | 40.0% | |
| CGATCCATTAGATGCATTCA+TGG | - | chr7.4:5790569-5790588 | MS.gene28820:CDS | 40.0% | |
| CGTGCTAACAGGAAATTGTT+TGG | - | chr7.4:5793187-5793206 | MS.gene28820:CDS | 40.0% | |
| CTATCTTCCACTTTCTCCTT+CGG | + | chr7.4:5790636-5790655 | None:intergenic | 40.0% | |
| GAATTTACAGTTGAAGGAGC+AGG | + | chr7.4:5794164-5794183 | None:intergenic | 40.0% | |
| GAGATAAGGACACAGCTTAT+TGG | + | chr7.4:5793737-5793756 | None:intergenic | 40.0% | |
| GCTGATCGAATGTTTGATCT+TGG | - | chr7.4:5791963-5791982 | MS.gene28820:intron | 40.0% | |
| GGCAATTTCTCAGAATCAGA+AGG | + | chr7.4:5792176-5792195 | None:intergenic | 40.0% | |
| GTATGATCAAGAGGAGCAAT+AGG | + | chr7.4:5790864-5790883 | None:intergenic | 40.0% | |
| GTTAATAGCTTAGTTGCTGC+TGG | - | chr7.4:5792581-5792600 | MS.gene28820:CDS | 40.0% | |
| TAGGAAGAGTTTGGCTATTC+GGG | - | chr7.4:5791443-5791462 | MS.gene28820:intron | 40.0% | |
| TATCTGATGTGCCAATTCTC+TGG | + | chr7.4:5791745-5791764 | None:intergenic | 40.0% | |
| TCATCAACCTCCCAAAATGA+AGG | - | chr7.4:5794023-5794042 | MS.gene28820:CDS | 40.0% | |
| TCCATGATATGCACGATCAT+AGG | + | chr7.4:5791669-5791688 | None:intergenic | 40.0% | |
| TCCTATGATCGTGCATATCA+TGG | - | chr7.4:5791665-5791684 | MS.gene28820:intron | 40.0% | |
| TGCTGGATATGATTCTGATG+AGG | - | chr7.4:5790746-5790765 | MS.gene28820:CDS | 40.0% | |
| TGCTTCAATTTCATCCACAG+TGG | + | chr7.4:5792267-5792286 | None:intergenic | 40.0% | |
| TGGATATGATTCTGATGAGG+AGG | - | chr7.4:5790749-5790768 | MS.gene28820:CDS | 40.0% | |
| TTGATCCTTATCACCATGCA+GGG | + | chr7.4:5792321-5792340 | None:intergenic | 40.0% | |
| TTGCAGAAAAGAGCAAGGTT+TGG | + | chr7.4:5792037-5792056 | None:intergenic | 40.0% | |
| TTGCCTGTAAATAGCATAGG+GGG | + | chr7.4:5792793-5792812 | None:intergenic | 40.0% | |
| ! | AACAACAACGATGATAACGC+CGG | - | chr7.4:5790519-5790538 | MS.gene28820:CDS | 40.0% |
| ! | ACTGAATCCTTCATTTTGGG+AGG | + | chr7.4:5794033-5794052 | None:intergenic | 40.0% |
| ! | CTGACGATGTTTTATGATGC+TGG | - | chr7.4:5793532-5793551 | MS.gene28820:intron | 40.0% |
| ! | GGGTTTGCTCCACAAATTAT+GGG | - | chr7.4:5791513-5791532 | MS.gene28820:intron | 40.0% |
| ! | GTGTTTTGTGTGCTTGATAC+AGG | - | chr7.4:5791393-5791412 | MS.gene28820:intron | 40.0% |
| ! | GTTGATGGATCTTGCTATGA+AGG | - | chr7.4:5792622-5792641 | MS.gene28820:CDS | 40.0% |
| ! | TATCCCCCTATGCTATTTAC+AGG | - | chr7.4:5792787-5792806 | MS.gene28820:CDS | 40.0% |
| ! | TGGGTTTGCTCCACAAATTA+TGG | - | chr7.4:5791512-5791531 | MS.gene28820:intron | 40.0% |
| AAAGCACAACCGGTAAAGCT+TGG | + | chr7.4:5791584-5791603 | None:intergenic | 45.0% | |
| AACTTACCTGGTGCTTGATG+AGG | - | chr7.4:5791941-5791960 | MS.gene28820:intron | 45.0% | |
| AAGCACACTTGTGAACCGTT+AGG | + | chr7.4:5791290-5791309 | None:intergenic | 45.0% | |
| AATGCTCAGAGCAACTTACC+TGG | - | chr7.4:5791929-5791948 | MS.gene28820:intron | 45.0% | |
| AGCACACTTGTGAACCGTTA+GGG | + | chr7.4:5791289-5791308 | None:intergenic | 45.0% | |
| AGTTTGGCTATTCGGGTATC+AGG | - | chr7.4:5791450-5791469 | MS.gene28820:intron | 45.0% | |
| ATACGTGTCTCTGCTGTCTA+TGG | - | chr7.4:5791801-5791820 | MS.gene28820:intron | 45.0% | |
| ATGTGCACCTACCAGAGAAT+TGG | - | chr7.4:5791731-5791750 | MS.gene28820:intron | 45.0% | |
| ATTAAAACCAGAGGGGAGAC+AGG | + | chr7.4:5793256-5793275 | None:intergenic | 45.0% | |
| CACAGCCCATTTATTCGTTC+AGG | + | chr7.4:5793037-5793056 | None:intergenic | 45.0% | |
| CACTGTCACTCTGATAGGAT+CGG | + | chr7.4:5792102-5792121 | None:intergenic | 45.0% | |
| CAGAAAAGAGCAAGGTTTGG+CGG | + | chr7.4:5792034-5792053 | None:intergenic | 45.0% | |
| CAGCTCGATTAAAACCAGAG+GGG | + | chr7.4:5793263-5793282 | None:intergenic | 45.0% | |
| CAGTTCAAAGAACTCAAGGC+AGG | - | chr7.4:5791843-5791862 | MS.gene28820:intron | 45.0% | |
| CGTTGTCTTCGAAATTGTCG+TGG | + | chr7.4:5790446-5790465 | None:intergenic | 45.0% | |
| GAAGCACAATTAGGTCAGAG+AGG | - | chr7.4:5792281-5792300 | MS.gene28820:CDS | 45.0% | |
| GACATGCATGTTCATCGCAT+TGG | - | chr7.4:5792476-5792495 | MS.gene28820:CDS | 45.0% | |
| GACTCTACTGTGCAGAGATA+AGG | + | chr7.4:5793751-5793770 | None:intergenic | 45.0% | |
| GAGATGCAAGAAAAGGAGGT+AGG | - | chr7.4:5793643-5793662 | MS.gene28820:intron | 45.0% | |
| GAGGAGTCACCTTCAATATC+AGG | - | chr7.4:5790921-5790940 | MS.gene28820:intron | 45.0% | |
| GATACAAAGCCAGCTAGTGT+TGG | + | chr7.4:5794086-5794105 | None:intergenic | 45.0% | |
| GATCCTATCAGAGTGACAGT+GGG | - | chr7.4:5792101-5792120 | MS.gene28820:CDS | 45.0% | |
| GCAAAGTCGAAAAGTTAGCC+AGG | - | chr7.4:5792066-5792085 | MS.gene28820:CDS | 45.0% | |
| GCCCTCAAAAAACTCTCCAT+TGG | + | chr7.4:5790684-5790703 | None:intergenic | 45.0% | |
| GCTGTAAATTCTCTGCGAAC+AGG | - | chr7.4:5793963-5793982 | MS.gene28820:CDS | 45.0% | |
| GCTTGGCATTGTATAGACGT+CGG | + | chr7.4:5791567-5791586 | None:intergenic | 45.0% | |
| GGCACATCAGATATATCTCG+AGG | - | chr7.4:5791752-5791771 | MS.gene28820:intron | 45.0% | |
| GGTAATTTCTCCAGAAGCCA+CGG | + | chr7.4:5792197-5792216 | None:intergenic | 45.0% | |
| GGTGCACATATCACTCCTAT+AGG | + | chr7.4:5791720-5791739 | None:intergenic | 45.0% | |
| GTTCACAAGTGTGCTTGTGT+CGG | - | chr7.4:5791294-5791313 | MS.gene28820:intron | 45.0% | |
| GTTCATCGCATTGGAAGAAC+AGG | - | chr7.4:5792485-5792504 | MS.gene28820:CDS | 45.0% | |
| GTTGAGTGCGATTGAACGTT+TGG | - | chr7.4:5791363-5791382 | MS.gene28820:intron | 45.0% | |
| GTTTGGCTATTCGGGTATCA+GGG | - | chr7.4:5791451-5791470 | MS.gene28820:intron | 45.0% | |
| TCACTCTGATAGGATCGGAA+AGG | + | chr7.4:5792097-5792116 | None:intergenic | 45.0% | |
| TGAGGGCGAAGAAGGATTTA+GGG | - | chr7.4:5790697-5790716 | MS.gene28820:CDS | 45.0% | |
| TGATGTGCCAATTCTCTGGT+AGG | + | chr7.4:5791741-5791760 | None:intergenic | 45.0% | |
| TGTCTTCTAATTCCGCAGGA+CGG | - | chr7.4:5793603-5793622 | MS.gene28820:intron | 45.0% | |
| TGTTGTGTAGGTGGGAGAAA+AGG | - | chr7.4:5793819-5793838 | MS.gene28820:CDS | 45.0% | |
| TTGAGGGCGAAGAAGGATTT+AGG | - | chr7.4:5790696-5790715 | MS.gene28820:CDS | 45.0% | |
| TTGGATTTGAGCCGCAAGTA+AGG | - | chr7.4:5791982-5792001 | MS.gene28820:intron | 45.0% | |
| ! | CAAAAAGAAGCACGGTTTGC+TGG | - | chr7.4:5792551-5792570 | MS.gene28820:CDS | 45.0% |
| ! | CATGCTAAAAATGAAGGCGC+TGG | - | chr7.4:5791905-5791924 | MS.gene28820:intron | 45.0% |
| ! | CTGATTCTGAGAAATTGCCG+TGG | - | chr7.4:5792177-5792196 | MS.gene28820:CDS | 45.0% |
| ! | GAAGGATTTAGGGTTGACGT+TGG | - | chr7.4:5790707-5790726 | MS.gene28820:CDS | 45.0% |
| ! | GCTAACTTTTCGACTTTGCG+AGG | + | chr7.4:5792065-5792084 | None:intergenic | 45.0% |
| ! | GTATCTGGTGGATCAATTGG+CGG | - | chr7.4:5794101-5794120 | MS.gene28820:CDS | 45.0% |
| ! | TCGTGGCTTTTACGAGATGA+AGG | + | chr7.4:5790429-5790448 | None:intergenic | 45.0% |
| ! | TCTCTACCAGAAAGCACAAC+CGG | + | chr7.4:5791594-5791613 | None:intergenic | 45.0% |
| ! | TGGCTTTTACGAGATGAAGG+AGG | + | chr7.4:5790426-5790445 | None:intergenic | 45.0% |
| ! | TTCATCCACAGTGGCCTTTT+TGG | + | chr7.4:5792258-5792277 | None:intergenic | 45.0% |
| ! | TTTAAAGTTGCTGCCCTGCA+TGG | - | chr7.4:5792305-5792324 | MS.gene28820:CDS | 45.0% |
| ! | TTTCTACAGTGCTGCCACTT+GGG | - | chr7.4:5793304-5793323 | MS.gene28820:intron | 45.0% |
| ! | TTTTCTACAGTGCTGCCACT+TGG | - | chr7.4:5793303-5793322 | MS.gene28820:intron | 45.0% |
| !! | ACACTAGCTGGCTTTGTATC+TGG | - | chr7.4:5794086-5794105 | MS.gene28820:CDS | 45.0% |
| !! | AGCTGTTGACTCTGTCATTC+TGG | - | chr7.4:5793278-5793297 | MS.gene28820:intron | 45.0% |
| !!! | GAGTTTTTTGAGGGCGAAGA+AGG | - | chr7.4:5790689-5790708 | MS.gene28820:CDS | 45.0% |
| AAAAGGCAAAGGCAGAGGTG+GGG | - | chr7.4:5793836-5793855 | MS.gene28820:CDS | 50.0% | |
| AATAAGTCCTGTCTCCCCTC+TGG | - | chr7.4:5793246-5793265 | MS.gene28820:CDS | 50.0% | |
| AGAAAAGGCAAAGGCAGAGG+TGG | - | chr7.4:5793834-5793853 | MS.gene28820:CDS | 50.0% | |
| AGCAAGATCCATCAACTCCG+TGG | + | chr7.4:5792618-5792637 | None:intergenic | 50.0% | |
| AGGATCGGAAAGGATTTCCC+TGG | + | chr7.4:5792087-5792106 | None:intergenic | 50.0% | |
| CAGAAGGAGGAAGGTCCTAT+AGG | - | chr7.4:5791702-5791721 | MS.gene28820:intron | 50.0% | |
| CATCGTTGGTCAGATTAGGC+CGG | - | chr7.4:5792007-5792026 | MS.gene28820:intron | 50.0% | |
| CATCTAACGCAGTTCCAGGT+CGG | - | chr7.4:5793934-5793953 | MS.gene28820:CDS | 50.0% | |
| CCAACGATGGACCTTACTTG+CGG | + | chr7.4:5791996-5792015 | None:intergenic | 50.0% | |
| CCTGAACTTCAGAAGGAGGA+AGG | - | chr7.4:5791693-5791712 | MS.gene28820:intron | 50.0% | |
| CGATCCTATCAGAGTGACAG+TGG | - | chr7.4:5792100-5792119 | MS.gene28820:CDS | 50.0% | |
| CTGCTTGGTTTCGTGCTAAC+AGG | - | chr7.4:5793176-5793195 | MS.gene28820:CDS | 50.0% | |
| CTGGTCAGAACAACACGAAC+AGG | - | chr7.4:5794210-5794229 | MS.gene28820:CDS | 50.0% | |
| CTTGATGTCAAGACCACGAG+CGG | + | chr7.4:5792414-5792433 | None:intergenic | 50.0% | |
| GAAAAGGCAAAGGCAGAGGT+GGG | - | chr7.4:5793835-5793854 | MS.gene28820:CDS | 50.0% | |
| GAATGTGTCCACGGAGTTGA+TGG | - | chr7.4:5792607-5792626 | MS.gene28820:CDS | 50.0% | |
| GAGATAGTTGTTGCTACGCC+TGG | - | chr7.4:5791870-5791889 | MS.gene28820:intron | 50.0% | |
| GCATCATCTAACGCAGTTCC+AGG | - | chr7.4:5793930-5793949 | MS.gene28820:CDS | 50.0% | |
| GGAACGTAAAGACGTTGAGG+AGG | + | chr7.4:5790405-5790424 | None:intergenic | 50.0% | |
| GGAGGAACGTAAAGACGTTG+AGG | + | chr7.4:5790408-5790427 | None:intergenic | 50.0% | |
| GGATCAGCCTGAACTTCAGA+AGG | - | chr7.4:5791686-5791705 | MS.gene28820:intron | 50.0% | |
| GGTCCATCGTTGGTCAGATT+AGG | - | chr7.4:5792003-5792022 | MS.gene28820:intron | 50.0% | |
| GTAGGTGGGAGAAAAGGCAA+AGG | - | chr7.4:5793825-5793844 | MS.gene28820:CDS | 50.0% | |
| GTCTTCTAATTCCGCAGGAC+GGG | - | chr7.4:5793604-5793623 | MS.gene28820:intron | 50.0% | |
| TATCAGAGTGACAGTGGGAG+AGG | - | chr7.4:5792106-5792125 | MS.gene28820:CDS | 50.0% | |
| TCAGCCTGAACTTCAGAAGG+AGG | - | chr7.4:5791689-5791708 | MS.gene28820:intron | 50.0% | |
| TCCACTTTCTCCTTCGGCTT+CGG | + | chr7.4:5790630-5790649 | None:intergenic | 50.0% | |
| TCTCCCACTGTCACTCTGAT+AGG | + | chr7.4:5792107-5792126 | None:intergenic | 50.0% | |
| TGAGAAATTGCCGTGGCTTC+TGG | - | chr7.4:5792184-5792203 | MS.gene28820:CDS | 50.0% | |
| TGCTGGTCAGAATGTGTCCA+CGG | - | chr7.4:5792598-5792617 | MS.gene28820:CDS | 50.0% | |
| TGCTTCCAAAAAGGCCACTG+TGG | - | chr7.4:5792250-5792269 | MS.gene28820:CDS | 50.0% | |
| TTATGCTGCTGCTAAAGCCG+TGG | - | chr7.4:5790773-5790792 | MS.gene28820:CDS | 50.0% | |
| ! | AACAACGATGATAACGCCGG+TGG | - | chr7.4:5790522-5790541 | MS.gene28820:CDS | 50.0% |
| ! | CTGTTCGTGTTGTTCTGACC+AGG | + | chr7.4:5794212-5794231 | None:intergenic | 50.0% |
| ! | GCTTTACCGGTTGTGCTTTC+TGG | - | chr7.4:5791585-5791604 | MS.gene28820:intron | 50.0% |
| ! | GGCATAGCGAAAACTGGTTC+TGG | - | chr7.4:5791621-5791640 | MS.gene28820:intron | 50.0% |
| ! | TTTAGGGTTGACGTTGGCGT+CGG | - | chr7.4:5790713-5790732 | MS.gene28820:CDS | 50.0% |
| !! | AGCACGGTTTGCTGGTGAAT+TGG | - | chr7.4:5792559-5792578 | MS.gene28820:CDS | 50.0% |
| !! | CCTTCCTCCTTCTGAAGTTC+AGG | + | chr7.4:5791696-5791715 | None:intergenic | 50.0% |
| !! | CTAGCTGGCTTTGTATCTGG+TGG | - | chr7.4:5794089-5794108 | MS.gene28820:CDS | 50.0% |
| !!! | GTGGATTTTGGCTTGGGCAT+TGG | - | chr7.4:5793885-5793904 | MS.gene28820:CDS | 50.0% |
| AAAGGCAAAGGCAGAGGTGG+GGG | - | chr7.4:5793837-5793856 | MS.gene28820:CDS | 55.0% | |
| AAAGGCGAAGGCCATCAGGT+TGG | - | chr7.4:5794338-5794357 | MS.gene28820:CDS | 55.0% | |
| AAGAGCAAGGTTTGGCGGTC+CGG | + | chr7.4:5792029-5792048 | None:intergenic | 55.0% | |
| AAGGCGAAGGCCATCAGGTT+GGG | - | chr7.4:5794339-5794358 | MS.gene28820:CDS | 55.0% | |
| ACCGAAGCCGAAGGAGAAAG+TGG | - | chr7.4:5790626-5790645 | MS.gene28820:CDS | 55.0% | |
| ACTTTCTCCTTCGGCTTCGG+TGG | + | chr7.4:5790627-5790646 | None:intergenic | 55.0% | |
| AGAGAAAGGCGAAGGCCATC+AGG | - | chr7.4:5794334-5794353 | MS.gene28820:CDS | 55.0% | |
| AGAGTGACAGTGGGAGAGGT+GGG | - | chr7.4:5792110-5792129 | MS.gene28820:CDS | 55.0% | |
| ATTGGAAGAACAGGCCGTGC+TGG | - | chr7.4:5792494-5792513 | MS.gene28820:CDS | 55.0% | |
| CCGCAAGTAAGGTCCATCGT+TGG | - | chr7.4:5791993-5792012 | MS.gene28820:intron | 55.0% | |
| CGGCCTAATCTGACCAACGA+TGG | + | chr7.4:5792009-5792028 | None:intergenic | 55.0% | |
| CGTGTCTCTGCTGTCTATGG+TGG | - | chr7.4:5791804-5791823 | MS.gene28820:intron | 55.0% | |
| CTCTTCACAACCACCACCAC+CGG | + | chr7.4:5790541-5790560 | None:intergenic | 55.0% | |
| GATCAGCCTCATCAAGCACC+AGG | + | chr7.4:5791950-5791969 | None:intergenic | 55.0% | |
| GATGGCCTTCGCCTTTCTCT+AGG | + | chr7.4:5794334-5794353 | None:intergenic | 55.0% | |
| GGGAGAAAAGGCAAAGGCAG+AGG | - | chr7.4:5793831-5793850 | MS.gene28820:CDS | 55.0% | |
| TGCTGCCCTGCATGGTGATA+AGG | - | chr7.4:5792313-5792332 | MS.gene28820:CDS | 55.0% | |
| TTTACAGCAGCAGACCGACC+TGG | + | chr7.4:5793951-5793970 | None:intergenic | 55.0% | |
| ! | AACGATGATAACGCCGGTGG+TGG | - | chr7.4:5790525-5790544 | MS.gene28820:CDS | 55.0% |
| !!! | CGCGGAGTGGATTTTGGCTT+GGG | - | chr7.4:5793879-5793898 | MS.gene28820:CDS | 55.0% |
| CAGAGTGACAGTGGGAGAGG+TGG | - | chr7.4:5792109-5792128 | MS.gene28820:CDS | 60.0% | |
| CTCCGTCCTTGTCACCAGCA+CGG | + | chr7.4:5792511-5792530 | None:intergenic | 60.0% | |
| GACCTGAATCTCCCGTCCTG+CGG | + | chr7.4:5793618-5793637 | None:intergenic | 60.0% | |
| GAGTGACAGTGGGAGAGGTG+GGG | - | chr7.4:5792111-5792130 | MS.gene28820:CDS | 60.0% | |
| GCTACTGATGTTGCCGCTCG+TGG | - | chr7.4:5792398-5792417 | MS.gene28820:CDS | 60.0% | |
| GCTGCTAAAGCCGTGGATGC+TGG | - | chr7.4:5790780-5790799 | MS.gene28820:CDS | 60.0% | |
| TTCCGCAGGACGGGAGATTC+AGG | - | chr7.4:5793613-5793632 | MS.gene28820:intron | 60.0% | |
| TTCTCCTTCGGCTTCGGTGG+CGG | + | chr7.4:5790624-5790643 | None:intergenic | 60.0% | |
| ! | AACAGGCCGTGCTGGTGACA+AGG | - | chr7.4:5792502-5792521 | MS.gene28820:CDS | 60.0% |
| ! | GATGATAACGCCGGTGGTGG+TGG | - | chr7.4:5790528-5790547 | MS.gene28820:CDS | 60.0% |
| !! | CGGTGGTGGTGGTTGTGAAG+AGG | - | chr7.4:5790539-5790558 | MS.gene28820:CDS | 60.0% |
| !! | GGTGTGCGCGGAGTGGATTT+TGG | - | chr7.4:5793873-5793892 | MS.gene28820:CDS | 60.0% |
| !!! | GCGCGGAGTGGATTTTGGCT+TGG | - | chr7.4:5793878-5793897 | MS.gene28820:CDS | 60.0% |
| GACAGTGGGAGAGGTGGGGA+TGG | - | chr7.4:5792115-5792134 | MS.gene28820:CDS | 65.0% | |
| GCGTCGGATGCGTTGCATGC+TGG | - | chr7.4:5790729-5790748 | MS.gene28820:CDS | 65.0% | |
| ! | AAAGGCAGAGGTGGGGGTGC+AGG | - | chr7.4:5793843-5793862 | MS.gene28820:CDS | 65.0% |
| ! | GCAGGTGGCAAAGGTGTGCG+CGG | - | chr7.4:5793861-5793880 | MS.gene28820:CDS | 65.0% |
| ! | GGCCGTGCTGGTGACAAGGA+CGG | - | chr7.4:5792506-5792525 | MS.gene28820:CDS | 65.0% |
| ! | TGGCAAAGGTGTGCGCGGAG+TGG | - | chr7.4:5793866-5793885 | MS.gene28820:CDS | 65.0% |
| ! | GGTGGGGGTGCAGGTGGCAA+AGG | - | chr7.4:5793852-5793871 | MS.gene28820:CDS | 70.0% |
| ! | GGCAGAGGTGGGGGTGCAGG+TGG | - | chr7.4:5793846-5793865 | MS.gene28820:CDS | 75.0% |
| ! | GGCGCCGCCACCGAAGCCGA+AGG | - | chr7.4:5790617-5790636 | MS.gene28820:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 5790327 | 5794369 | 5790327 | ID=MS.gene28820 |
| chr7.4 | mRNA | 5790327 | 5794369 | 5790327 | ID=MS.gene28820.t1;Parent=MS.gene28820 |
| chr7.4 | exon | 5793754 | 5794369 | 5793754 | ID=MS.gene28820.t1.exon1;Parent=MS.gene28820.t1 |
| chr7.4 | CDS | 5793754 | 5794369 | 5793754 | ID=cds.MS.gene28820.t1;Parent=MS.gene28820.t1 |
| chr7.4 | exon | 5792053 | 5793281 | 5792053 | ID=MS.gene28820.t1.exon2;Parent=MS.gene28820.t1 |
| chr7.4 | CDS | 5792053 | 5793281 | 5792053 | ID=cds.MS.gene28820.t1;Parent=MS.gene28820.t1 |
| chr7.4 | exon | 5791036 | 5791075 | 5791036 | ID=MS.gene28820.t1.exon3;Parent=MS.gene28820.t1 |
| chr7.4 | CDS | 5791036 | 5791075 | 5791036 | ID=cds.MS.gene28820.t1;Parent=MS.gene28820.t1 |
| chr7.4 | exon | 5790465 | 5790867 | 5790465 | ID=MS.gene28820.t1.exon4;Parent=MS.gene28820.t1 |
| chr7.4 | CDS | 5790465 | 5790867 | 5790465 | ID=cds.MS.gene28820.t1;Parent=MS.gene28820.t1 |
| chr7.4 | exon | 5790327 | 5790372 | 5790327 | ID=MS.gene28820.t1.exon5;Parent=MS.gene28820.t1 |
| chr7.4 | CDS | 5790327 | 5790372 | 5790327 | ID=cds.MS.gene28820.t1;Parent=MS.gene28820.t1 |
| Gene Sequence |
| Protein sequence |
