AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48151


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48151.t1 MTR_6g035305 98.820 339 4 0 1 339 1 339 0.0 697
MS.gene48151.t1 MTR_2g008030 84.179 335 53 0 1 335 1 335 0.0 597
MS.gene48151.t1 MTR_7g066120 50.000 342 153 2 11 335 71 411 8.60e-114 336
MS.gene48151.t1 MTR_0776s0010 41.337 329 185 5 7 328 284 611 1.60e-83 276
MS.gene48151.t1 MTR_4g093620 40.836 311 161 6 32 332 87 384 9.99e-73 231
MS.gene48151.t1 MTR_3g070100 28.253 269 165 8 67 327 116 364 9.18e-19 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48151.t1 AT1G43670 85.251 339 50 0 1 339 1 339 0.0 614
MS.gene48151.t1 AT3G54050 50.292 342 150 3 11 335 79 417 2.00e-114 338
MS.gene48151.t1 AT3G54050 50.292 342 150 3 11 335 79 417 2.00e-114 338
MS.gene48151.t1 AT5G64380 40.836 311 165 7 32 332 89 390 5.29e-74 234
MS.gene48151.t1 AT3G55800 29.670 273 156 9 67 327 123 371 1.20e-19 89.4

Find 80 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAAATCTTGCCTTTCTT+TGG 0.224320 6.4:-8843236 None:intergenic
TTGCTTAATAACATTGTTCT+TGG 0.232374 6.4:+8839383 MS.gene48151:CDS
ACCACTGGAAGTGGTGTTAA+TGG 0.234751 6.4:+8842436 MS.gene48151:CDS
GCAAAGTCTCTTAGATATAT+TGG 0.276844 6.4:+8843432 MS.gene48151:CDS
CCTAACTCACCCTGACATTA+AGG 0.279021 6.4:+8842492 MS.gene48151:CDS
GAAAGATCTCCGATATTTCT+TGG 0.282491 6.4:+8845320 MS.gene48151:CDS
CTTCCCAATGTCCTTCTTGA+TGG 0.290934 6.4:+8844568 MS.gene48151:CDS
GTAAAATCTCCACGTGATTC+AGG 0.312460 6.4:-8839356 None:intergenic
ATGCATTACCCTTTCCTTGC+CGG 0.313636 6.4:-8844615 None:intergenic
GCAAAGCTCATTGGACTTGC+TGG 0.331186 6.4:+8840807 MS.gene48151:CDS
AATAAATCTTGCCTTTCTTT+GGG 0.337209 6.4:-8843235 None:intergenic
ATTCAACACAAAACGTGTTA+TGG 0.348871 6.4:-8839318 None:intergenic
CCTTAATGTCAGGGTGAGTT+AGG 0.353076 6.4:-8842492 None:intergenic
GTTCATCGTACATTGCTATA+TGG 0.377460 6.4:+8844379 MS.gene48151:CDS
TTCACTCTCGACCCTTCTCT+TGG 0.387036 6.4:+8842460 MS.gene48151:CDS
GGTAGGACCATCCCAGTTCT+TGG 0.411498 6.4:-8843276 None:intergenic
TGCTGGAGAGACCAATGTTC+AGG 0.415049 6.4:+8840824 MS.gene48151:CDS
ATGAAGGGAATGCCAAGAAC+TGG 0.427423 6.4:+8843264 MS.gene48151:CDS
CATCATCTATGATTGGTTCA+TGG 0.429120 6.4:-8842225 None:intergenic
TGCAGAACATCATCTATGAT+TGG 0.429779 6.4:-8842232 None:intergenic
ATGTTGGAGGAGCCGTCTAA+TGG 0.431159 6.4:-8841820 None:intergenic
GCAGAATATACCTTAATGTC+AGG 0.435699 6.4:-8842502 None:intergenic
TTTGTCAGCAGGGTACAAAA+AGG 0.440471 6.4:-8844407 None:intergenic
GCTGGTCTTGCAAAGCTCAT+TGG 0.453630 6.4:+8840798 MS.gene48151:CDS
AATGTCCTTCTTGATGGAAC+AGG 0.459315 6.4:+8844574 MS.gene48151:CDS
AAGATTTATTCAGTGAATGA+AGG 0.460520 6.4:+8843248 MS.gene48151:CDS
GGGTGAAGAGCAGAAGAAGC+TGG 0.462335 6.4:+8841263 MS.gene48151:intron
TCATAGCTACCAAGAAATAT+CGG 0.462666 6.4:-8845329 None:intergenic
GGCTTTCACCGGCAAGGAAA+GGG 0.474657 6.4:+8844607 MS.gene48151:CDS
AGCCTTGCAAAACACCTCAT+TGG 0.482303 6.4:-8841295 None:intergenic
AGATGAGGATGCAATATTTG+TGG 0.495684 6.4:+8841442 MS.gene48151:CDS
ATTGATTGTGGTGTTTCCAT+TGG 0.496286 6.4:+8841841 MS.gene48151:CDS
AACAATGTTATTAAGCAAGA+TGG 0.502314 6.4:-8839378 None:intergenic
GTTCCATCAAGAAGGACATT+GGG 0.503823 6.4:-8844571 None:intergenic
GATGGAACAGGCAGGAGGAC+AGG 0.504743 6.4:+8844586 MS.gene48151:CDS
GCTGCTAACATGTTCTTCCC+TGG 0.509552 6.4:-8842256 None:intergenic
AGGCTTTCACCGGCAAGGAA+AGG 0.509795 6.4:+8844606 MS.gene48151:CDS
ATATATCTAAGAGACTTTGC+TGG 0.512421 6.4:-8843429 None:intergenic
AGGATAAACTCGCCAAGAGA+AGG 0.516852 6.4:-8842472 None:intergenic
AACAACTTTCCACGCTGCTT+AGG 0.518664 6.4:-8841467 None:intergenic
GCAGCTGGTTATTGCATGTA+CGG 0.523788 6.4:+8842274 MS.gene48151:CDS
AAATGCAAGTTTCCAACAGA+TGG 0.529309 6.4:+8843402 MS.gene48151:CDS
TAGATGATGTTCTGCAACCA+GGG 0.531413 6.4:+8842239 MS.gene48151:CDS
TCTTTGCAGATCCCAAAGAA+AGG 0.537179 6.4:+8843224 MS.gene48151:intron
TGTTCCATCAAGAAGGACAT+TGG 0.542151 6.4:-8844572 None:intergenic
GGAAACACTTACCTGAACAT+TGG 0.543127 6.4:-8840835 None:intergenic
ATAGATGATGTTCTGCAACC+AGG 0.548458 6.4:+8842238 MS.gene48151:CDS
GCAGGAGGACAGGCTTTCAC+CGG 0.548518 6.4:+8844596 MS.gene48151:CDS
TTTGCTGGTGAACCATCTGT+TGG 0.549730 6.4:-8843414 None:intergenic
TCCTGCCTGTTCCATCAAGA+AGG 0.554789 6.4:-8844579 None:intergenic
GGGAAGAACATGTTAGCAGC+TGG 0.562041 6.4:+8842259 MS.gene48151:CDS
GGAAACACCACAATCAATGT+TGG 0.562157 6.4:-8841836 None:intergenic
TTGCAGTTTGTGATAACCAC+TGG 0.562279 6.4:+8842421 MS.gene48151:intron
TAGGGATCATACAGTTCCAA+TGG 0.562520 6.4:-8841857 None:intergenic
CAAAGCTCTTTATGCTGCAG+AGG 0.565129 6.4:+8845367 MS.gene48151:CDS
CTTGGTTTCTGAAGAAGATG+AGG 0.575814 6.4:+8841427 MS.gene48151:CDS
TGCAAGGCTTTGATAAGCAG+TGG 0.579114 6.4:+8841309 MS.gene48151:CDS
AGATTTATTCAGTGAATGAA+GGG 0.580033 6.4:+8843249 MS.gene48151:CDS
ACCATTAACACCACTTCCAG+TGG 0.586134 6.4:-8842437 None:intergenic
GGATAAACTCGCCAAGAGAA+GGG 0.588099 6.4:-8842471 None:intergenic
TCCTTCTTGATGGAACAGGC+AGG 0.593282 6.4:+8844578 MS.gene48151:CDS
CATGTACGGAAGCTCTTGCA+CGG 0.593772 6.4:+8842288 MS.gene48151:CDS
TTTGTGATAACCACTGGAAG+TGG 0.598951 6.4:+8842427 MS.gene48151:CDS
CAGAATATACCTTAATGTCA+GGG 0.600106 6.4:-8842501 None:intergenic
AACACCACAATCAATGTTGG+AGG 0.603640 6.4:-8841833 None:intergenic
AGAGTCCAAATGGAAAACTT+CGG 0.610193 6.4:+8844431 MS.gene48151:CDS
GGGAATGCCAAGAACTGGGA+TGG 0.611887 6.4:+8843269 MS.gene48151:CDS
TGTTTGTTCTGCTGTTAACA+AGG 0.612661 6.4:+8839415 MS.gene48151:CDS
GGCTCCTCCAACATTGATTG+TGG 0.614292 6.4:+8841829 MS.gene48151:CDS
AGTCTCTTAGATATATTGGA+AGG 0.616044 6.4:+8843436 MS.gene48151:CDS
ATTCATACGTACGCAGCGGT+AGG 0.620838 6.4:-8843293 None:intergenic
AGGACAGGCTTTCACCGGCA+AGG 0.624102 6.4:+8844601 MS.gene48151:CDS
GCTGGATGTTCTTTCCAATG+AGG 0.626395 6.4:+8841281 MS.gene48151:CDS
TGAAGGGAATGCCAAGAACT+GGG 0.636555 6.4:+8843265 MS.gene48151:CDS
TACGATGTGCATCTGCGCTG+TGG 0.637166 6.4:-8839283 None:intergenic
CATCGTACATTGCTATATGG+AGG 0.654004 6.4:+8844382 MS.gene48151:CDS
TGGTAGCTATGATGATATCG+AGG 0.676941 6.4:+8845340 MS.gene48151:CDS
TTCTTGATGGAACAGGCAGG+AGG 0.688021 6.4:+8844581 MS.gene48151:CDS
TCTAAGCATCCTGAATCACG+TGG 0.704682 6.4:+8839347 MS.gene48151:CDS
TTTGTGGATCCTAAGCAGCG+TGG 0.736390 6.4:+8841458 MS.gene48151:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAACAACTTAATTTTATT+TGG + chr6.4:8840211-8840230 MS.gene48151:intron 10.0%
!!! TCTAATTATTTTAATTTTGA+TGG + chr6.4:8844502-8844521 MS.gene48151:intron 10.0%
!!! TTAAAAAGTGATTTTTATTA+TGG - chr6.4:8844701-8844720 None:intergenic 10.0%
!!! TTGAAAAGAATTTATTTTTA+CGG + chr6.4:8844917-8844936 MS.gene48151:intron 10.0%
!! ACTTATTGTAATATTCAAAT+AGG + chr6.4:8843148-8843167 MS.gene48151:intron 15.0%
!! ATCTTACTAAATTAATTGTT+AGG + chr6.4:8841041-8841060 MS.gene48151:intron 15.0%
!! CTTATTGTAATATTCAAATA+GGG + chr6.4:8843149-8843168 MS.gene48151:intron 15.0%
!! TAAGATTGAAAATTTAACAA+TGG + chr6.4:8843345-8843364 MS.gene48151:intron 15.0%
!!! AACAATTTCTCATTTTAAAT+AGG + chr6.4:8844734-8844753 MS.gene48151:intron 15.0%
!!! AAGCTAATATAATTTGTATT+TGG + chr6.4:8844479-8844498 MS.gene48151:intron 15.0%
!!! TAAAACACTTTTTTTATTGA+AGG - chr6.4:8839592-8839611 None:intergenic 15.0%
!!! TTTTGTGAATAAAAAAAATG+CGG - chr6.4:8844130-8844149 None:intergenic 15.0%
!!! TTTTTCTTCGAAAAATATAT+AGG + chr6.4:8844657-8844676 MS.gene48151:intron 15.0%
!! AAGAGATTTCAATAAAAGTA+TGG + chr6.4:8844987-8845006 MS.gene48151:intron 20.0%
!! AATAAGTTTGCATTATAGAT+AGG - chr6.4:8843135-8843154 None:intergenic 20.0%
!! CTAGAGTCTATAATTATTAA+TGG + chr6.4:8843791-8843810 MS.gene48151:intron 20.0%
!! CTTATTAGACATTTATAAGA+AGG - chr6.4:8845138-8845157 None:intergenic 20.0%
!! CTTCTTATAAATGTCTAATA+AGG + chr6.4:8845136-8845155 MS.gene48151:intron 20.0%
!! GAAGGAAAAAAAAAATATGA+TGG - chr6.4:8845120-8845139 None:intergenic 20.0%
!! GATATTTGCATGATTAAAAA+AGG + chr6.4:8839825-8839844 MS.gene48151:intron 20.0%
!! TTAATTACTCCATTACAATA+CGG + chr6.4:8842387-8842406 MS.gene48151:intron 20.0%
!! TTCAATGTAACAATTTATGT+CGG - chr6.4:8839929-8839948 None:intergenic 20.0%
!!! AAAAACAACTTATTTCTTAC+AGG - chr6.4:8843708-8843727 None:intergenic 20.0%
!!! AAAATACTACTTTTTCATGA+TGG + chr6.4:8840955-8840974 MS.gene48151:intron 20.0%
!!! AAATATCGTTTTATTGGATT+AGG - chr6.4:8844896-8844915 None:intergenic 20.0%
!!! AATATCGTTTTATTGGATTA+GGG - chr6.4:8844895-8844914 None:intergenic 20.0%
!!! ATGATTAAAAAAGGTTGATA+TGG + chr6.4:8839834-8839853 MS.gene48151:intron 20.0%
!!! ATGTACTTTTCTTTATTGTT+TGG + chr6.4:8841234-8841253 MS.gene48151:intron 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG - chr6.4:8840205-8840224 None:intergenic 20.0%
!!! TCTATTTTTTATTACGATTC+AGG + chr6.4:8841779-8841798 MS.gene48151:intron 20.0%
!!! TGAAAGATAATTGATGATTT+TGG - chr6.4:8843845-8843864 None:intergenic 20.0%
!!! TTAAGTTGTTTATCCAAATA+GGG - chr6.4:8840204-8840223 None:intergenic 20.0%
!!! TTATATTAGCTTAAACATTG+AGG - chr6.4:8844471-8844490 None:intergenic 20.0%
!!! TTCAACAAATATCGTTTTAT+TGG - chr6.4:8844902-8844921 None:intergenic 20.0%
!!! TTGTTTATTTTATCCAAACA+AGG - chr6.4:8843519-8843538 None:intergenic 20.0%
!!! TTTTTCTTATTACAGTTATG+TGG + chr6.4:8843377-8843396 MS.gene48151:intron 20.0%
! AAAACAAGTATACATCACAT+TGG - chr6.4:8844202-8844221 None:intergenic 25.0%
! AAACATAGAATTATGATCAG+TGG - chr6.4:8839539-8839558 None:intergenic 25.0%
! AAACCTTCTTAGAGAATATA+TGG - chr6.4:8841527-8841546 None:intergenic 25.0%
! AACAATGTTATTAAGCAAGA+TGG - chr6.4:8839381-8839400 None:intergenic 25.0%
! AACCTTCTTAGAGAATATAT+GGG - chr6.4:8841526-8841545 None:intergenic 25.0%
! AAGATTTATTCAGTGAATGA+AGG + chr6.4:8843248-8843267 MS.gene48151:CDS 25.0%
! AATAAATCTTGCCTTTCTTT+GGG - chr6.4:8843238-8843257 None:intergenic 25.0%
! ACAAAACAAAAAAAGAGTGA+AGG - chr6.4:8839450-8839469 None:intergenic 25.0%
! ACACCAACAATTAACATAAA+TGG - chr6.4:8843197-8843216 None:intergenic 25.0%
! ACACCATTTATGTTAATTGT+TGG + chr6.4:8843191-8843210 MS.gene48151:intron 25.0%
! ACCAAACTAGGATAAAAATA+AGG - chr6.4:8843062-8843081 None:intergenic 25.0%
! AGATTTATTCAGTGAATGAA+GGG + chr6.4:8843249-8843268 MS.gene48151:CDS 25.0%
! ATAATAAGAGTAGAGATACA+TGG + chr6.4:8844964-8844983 MS.gene48151:intron 25.0%
! CAATCAAGACTTCAATATAT+TGG - chr6.4:8840659-8840678 None:intergenic 25.0%
! CATTTAGTACCAAACATAAA+AGG + chr6.4:8840172-8840191 MS.gene48151:intron 25.0%
! CCATAATTGTATATCAATCA+CGG - chr6.4:8840027-8840046 None:intergenic 25.0%
! GAAAACAACTTATAGCTTAT+TGG - chr6.4:8843657-8843676 None:intergenic 25.0%
! GGATTTCACTAAAAGTTAAT+CGG - chr6.4:8844097-8844116 None:intergenic 25.0%
! TAAAAGTTAATCGGTAAAGT+CGG - chr6.4:8844088-8844107 None:intergenic 25.0%
! TAATTACTCCATTACAATAC+GGG + chr6.4:8842388-8842407 MS.gene48151:intron 25.0%
! TATCAAATTATTAGCAGTGT+CGG + chr6.4:8839693-8839712 MS.gene48151:intron 25.0%
! TCTATTTGCTTAAAACTTCA+TGG + chr6.4:8842621-8842640 MS.gene48151:intron 25.0%
! TGAATAAAAAAAATGCGGTT+GGG - chr6.4:8844125-8844144 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+CGG - chr6.4:8839654-8839673 None:intergenic 25.0%
! TTGCTTAATAACATTGTTCT+TGG + chr6.4:8839383-8839402 MS.gene48151:CDS 25.0%
!! ACTTCTAAGGAATTCAAAAA+AGG - chr6.4:8845164-8845183 None:intergenic 25.0%
!! AGTTTAATAGCTTTTGATGA+TGG + chr6.4:8841382-8841401 MS.gene48151:intron 25.0%
!! GCAAACTTATAAGTTTGTTT+GGG - chr6.4:8840859-8840878 None:intergenic 25.0%
!! TAGATTTTTCTTTTTTCTGC+AGG + chr6.4:8844760-8844779 MS.gene48151:intron 25.0%
!! TCTTTATTGTTTGGAATGAA+GGG + chr6.4:8841243-8841262 MS.gene48151:intron 25.0%
!! TGAACATTTTGCAGATTTTT+GGG + chr6.4:8842182-8842201 MS.gene48151:intron 25.0%
!! TGCAAACTTATAAGTTTGTT+TGG - chr6.4:8840860-8840879 None:intergenic 25.0%
!! TGTTATCAAGATTCATTTTG+TGG + chr6.4:8839783-8839802 MS.gene48151:intron 25.0%
!! TGTTTTCGTATAAGCTATTT+TGG + chr6.4:8840440-8840459 MS.gene48151:intron 25.0%
!! TTCTTTATTGTTTGGAATGA+AGG + chr6.4:8841242-8841261 MS.gene48151:intron 25.0%
!! TTGAACATTTTGCAGATTTT+TGG + chr6.4:8842181-8842200 MS.gene48151:intron 25.0%
!! TTTTTGTACATTAAACAGCA+TGG + chr6.4:8844348-8844367 MS.gene48151:intron 25.0%
!!! AAAAAGGTTGATATGGATTA+AGG + chr6.4:8839841-8839860 MS.gene48151:intron 25.0%
!!! AAATCACTTTTGATTGATGA+TGG + chr6.4:8841003-8841022 MS.gene48151:intron 25.0%
!!! GAAGTTTAACTGTGATTTTT+TGG + chr6.4:8841735-8841754 MS.gene48151:intron 25.0%
!!! TATTTTTACAACCCTGTTAT+TGG + chr6.4:8844049-8844068 MS.gene48151:intron 25.0%
!!! TGAGATTTTGTTATATGTGT+AGG + chr6.4:8840776-8840795 MS.gene48151:intron 25.0%
!!! TGCAACTAAGATTTTAATTG+TGG + chr6.4:8840611-8840630 MS.gene48151:intron 25.0%
!!! TTTTAGAAGTTTGCATCATA+TGG - chr6.4:8844816-8844835 None:intergenic 25.0%
AAATAAGGCAAATTCTACAG+TGG - chr6.4:8843047-8843066 None:intergenic 30.0%
AAGTAGTAAAATCAGCATGT+TGG - chr6.4:8845198-8845217 None:intergenic 30.0%
AAGTTGTTTATCCAAGTGAT+TGG - chr6.4:8840350-8840369 None:intergenic 30.0%
ACAAATTTGAGTAGGGATTA+GGG - chr6.4:8841878-8841897 None:intergenic 30.0%
ACCAGTGTTTAAAAATCACT+CGG + chr6.4:8842727-8842746 MS.gene48151:intron 30.0%
ACGTTGAGATGAAATCAATT+TGG + chr6.4:8841161-8841180 MS.gene48151:intron 30.0%
AGATATCTTAAGTAAGGTCT+CGG - chr6.4:8844160-8844179 None:intergenic 30.0%
AGTCTCTTAGATATATTGGA+AGG + chr6.4:8843436-8843455 MS.gene48151:CDS 30.0%
AGTTGTTTATCCAAGTGATT+GGG - chr6.4:8840349-8840368 None:intergenic 30.0%
ATACATACACTCTTCACTAA+TGG - chr6.4:8843960-8843979 None:intergenic 30.0%
ATAGCTATTGCTATAAGCTT+TGG - chr6.4:8843601-8843620 None:intergenic 30.0%
ATATATCTAAGAGACTTTGC+TGG - chr6.4:8843432-8843451 None:intergenic 30.0%
ATCCGTGCTTCATTAAATAT+GGG + chr6.4:8839755-8839774 MS.gene48151:intron 30.0%
ATTCAACACAAAACGTGTTA+TGG - chr6.4:8839321-8839340 None:intergenic 30.0%
ATTGCAAGACAAATTTGAGT+AGG - chr6.4:8841886-8841905 None:intergenic 30.0%
CAGAATATACCTTAATGTCA+GGG - chr6.4:8842504-8842523 None:intergenic 30.0%
CCGTGATTGATATACAATTA+TGG + chr6.4:8840024-8840043 MS.gene48151:intron 30.0%
CGTCAGTTCAATAAAAAACA+AGG - chr6.4:8842890-8842909 None:intergenic 30.0%
CTAAAGTTGACTACCTTAAT+AGG + chr6.4:8842691-8842710 MS.gene48151:intron 30.0%
GAACTCAGATATCTTAAGTA+AGG - chr6.4:8844166-8844185 None:intergenic 30.0%
GAATAAATCTTGCCTTTCTT+TGG - chr6.4:8843239-8843258 None:intergenic 30.0%
GATACTTTACACCAATAACA+GGG - chr6.4:8844063-8844082 None:intergenic 30.0%
GATGAATCTTCTATGATATC+AGG + chr6.4:8845268-8845287 MS.gene48151:intron 30.0%
GCAAAGTCTCTTAGATATAT+TGG + chr6.4:8843432-8843451 MS.gene48151:CDS 30.0%
GTGAATAAAAAAAATGCGGT+TGG - chr6.4:8844126-8844145 None:intergenic 30.0%
TAAACATTAATAGAGAGCAG+AGG - chr6.4:8843112-8843131 None:intergenic 30.0%
TACATACACTCTTCACTAAT+GGG - chr6.4:8843959-8843978 None:intergenic 30.0%
TAGAAGATTCATCAGTTGAT+TGG - chr6.4:8845261-8845280 None:intergenic 30.0%
TATCCGTGCTTCATTAAATA+TGG + chr6.4:8839754-8839773 MS.gene48151:intron 30.0%
TATTTAATGAAGCACGGATA+CGG - chr6.4:8839754-8839773 None:intergenic 30.0%
TCAAGACTTCAATATATTGG+TGG - chr6.4:8840656-8840675 None:intergenic 30.0%
TCATAGCTACCAAGAAATAT+CGG - chr6.4:8845332-8845351 None:intergenic 30.0%
TTATGTTAATTGTTGGTGTG+TGG + chr6.4:8843198-8843217 MS.gene48151:intron 30.0%
TTCATCCAAAAATCAAACTC+AGG + chr6.4:8840319-8840338 MS.gene48151:intron 30.0%
TTCCCATATTTAATGAAGCA+CGG - chr6.4:8839760-8839779 None:intergenic 30.0%
TTGCAAGACAAATTTGAGTA+GGG - chr6.4:8841885-8841904 None:intergenic 30.0%
TTTCATGATGGTTAGTGAAA+TGG + chr6.4:8840967-8840986 MS.gene48151:intron 30.0%
TTTGGTACTAAATGCGATAA+TGG - chr6.4:8840166-8840185 None:intergenic 30.0%
! ACTCTGATGTAAAGTTTGTT+CGG - chr6.4:8845072-8845091 None:intergenic 30.0%
! CCAATTGTTTCAACTTTTGT+GGG - chr6.4:8843999-8844018 None:intergenic 30.0%
! GATCTTTCATGCAATTTTGT+TGG - chr6.4:8845308-8845327 None:intergenic 30.0%
! GTTCTTGTTATATGTGTAGA+AGG + chr6.4:8842120-8842139 MS.gene48151:intron 30.0%
! TCCAATTGTTTCAACTTTTG+TGG - chr6.4:8844000-8844019 None:intergenic 30.0%
! TGAATTTTCATGCTTTTGTG+TGG + chr6.4:8843865-8843884 MS.gene48151:intron 30.0%
! TTCCCATATATTCTCTAAGA+AGG + chr6.4:8841521-8841540 MS.gene48151:intron 30.0%
!! ATTTTGTTATATGTGTAGGC+TGG + chr6.4:8840780-8840799 MS.gene48151:intron 30.0%
!! TGTTTTGAATAGTGTAGTTG+TGG + chr6.4:8840567-8840586 MS.gene48151:intron 30.0%
!!! GCCTTATTTTTATCCTAGTT+TGG + chr6.4:8843058-8843077 MS.gene48151:intron 30.0%
!!! GTTGTTTTTGATCCATTAGA+CGG + chr6.4:8841808-8841827 MS.gene48151:CDS 30.0%
!!! TATGTTTTAACAGTGCATCT+TGG + chr6.4:8841409-8841428 MS.gene48151:intron 30.0%
AAACCAAGTGCATAGAATAG+AGG - chr6.4:8844029-8844048 None:intergenic 35.0%
AAATGCAAGTTTCCAACAGA+TGG + chr6.4:8843402-8843421 MS.gene48151:CDS 35.0%
AAGCATGTTAGACTCTTTCT+AGG - chr6.4:8843479-8843498 None:intergenic 35.0%
ACATTGCTTTAGCTGCTATT+TGG - chr6.4:8841083-8841102 None:intergenic 35.0%
AGACTCAAGAAGCTGAAAAA+TGG - chr6.4:8843893-8843912 None:intergenic 35.0%
AGAGTCCAAATGGAAAACTT+CGG + chr6.4:8844431-8844450 MS.gene48151:CDS 35.0%
AGATGAGGATGCAATATTTG+TGG + chr6.4:8841442-8841461 MS.gene48151:CDS 35.0%
AGCATGTTAGACTCTTTCTA+GGG - chr6.4:8843478-8843497 None:intergenic 35.0%
AGTTGCTCATAGCTTAGTTA+GGG - chr6.4:8845035-8845054 None:intergenic 35.0%
ATTGATTGTGGTGTTTCCAT+TGG + chr6.4:8841841-8841860 MS.gene48151:CDS 35.0%
CAGCTTAACCACAATTACAA+CGG - chr6.4:8840087-8840106 None:intergenic 35.0%
CAGGAAAACAATAAGCTCTT+TGG - chr6.4:8843689-8843708 None:intergenic 35.0%
CCAAACACACATGAACAATT+TGG + chr6.4:8841200-8841219 MS.gene48151:intron 35.0%
CCAAATTGTTCATGTGTGTT+TGG - chr6.4:8841203-8841222 None:intergenic 35.0%
CCATACTAACTGTATATTGC+CGG + chr6.4:8842152-8842171 MS.gene48151:intron 35.0%
CCATGATGTTGTTGTAATCA+AGG + chr6.4:8841585-8841604 MS.gene48151:intron 35.0%
CCCACAAAAGTTGAAACAAT+TGG + chr6.4:8843996-8844015 MS.gene48151:intron 35.0%
CCTTGATTACAACAACATCA+TGG - chr6.4:8841588-8841607 None:intergenic 35.0%
GAAAGATCTCCGATATTTCT+TGG + chr6.4:8845320-8845339 MS.gene48151:CDS 35.0%
GACAAATTTGAGTAGGGATT+AGG - chr6.4:8841879-8841898 None:intergenic 35.0%
GATATCTTAAGTAAGGTCTC+GGG - chr6.4:8844159-8844178 None:intergenic 35.0%
GCAAAATGTTCAATTGACAC+CGG - chr6.4:8842174-8842193 None:intergenic 35.0%
GCAGAATATACCTTAATGTC+AGG - chr6.4:8842505-8842524 None:intergenic 35.0%
GGATACTTTACACCAATAAC+AGG - chr6.4:8844064-8844083 None:intergenic 35.0%
GTATGGAAATTAGCATAACG+TGG + chr6.4:8845004-8845023 MS.gene48151:intron 35.0%
GTGTCAATTCGACAAATTCA+AGG + chr6.4:8842823-8842842 MS.gene48151:intron 35.0%
GTTAGTGTTTGTGTTGTATC+TGG + chr6.4:8839986-8840005 MS.gene48151:intron 35.0%
GTTCATCGTACATTGCTATA+TGG + chr6.4:8844379-8844398 MS.gene48151:CDS 35.0%
TAAAAAAAATGCGGTTGGGA+TGG - chr6.4:8844121-8844140 None:intergenic 35.0%
TAAAAGGCTAAGACCCTATT+TGG + chr6.4:8840188-8840207 MS.gene48151:intron 35.0%
TAGTTGCTCATAGCTTAGTT+AGG - chr6.4:8845036-8845055 None:intergenic 35.0%
TGCAGAACATCATCTATGAT+TGG - chr6.4:8842235-8842254 None:intergenic 35.0%
TGTGATCTGTTCATAACTCT+TGG + chr6.4:8843916-8843935 MS.gene48151:intron 35.0%
TGTTTGTTCTGCTGTTAACA+AGG + chr6.4:8839415-8839434 MS.gene48151:CDS 35.0%
TTAAGGACACTCCTCTTATT+AGG + chr6.4:8839858-8839877 MS.gene48151:intron 35.0%
TTACATTGCCGTTGTAATTG+TGG + chr6.4:8840076-8840095 MS.gene48151:intron 35.0%
TTTGTGGGCAATAACTAATG+AGG - chr6.4:8843984-8844003 None:intergenic 35.0%
! ACATACCGAAGTTTTCCATT+TGG - chr6.4:8844439-8844458 None:intergenic 35.0%
! CATCATCTATGATTGGTTCA+TGG - chr6.4:8842228-8842247 None:intergenic 35.0%
! TAAGTGTGTGTTTGGAATTG+CGG + chr6.4:8840132-8840151 MS.gene48151:intron 35.0%
! TAGTAATCTGGAGTTTGGTT+GGG + chr6.4:8840267-8840286 MS.gene48151:intron 35.0%
! TCCGAGTGATTTTTAAACAC+TGG - chr6.4:8842731-8842750 None:intergenic 35.0%
! TGACAGTCTAAAACCTTCTA+CGG + chr6.4:8841711-8841730 MS.gene48151:intron 35.0%
!! ATACGAACTTGCTCATTTTG+AGG + chr6.4:8842662-8842681 MS.gene48151:intron 35.0%
!! GAGAACCTGAGTTTGATTTT+TGG - chr6.4:8840327-8840346 None:intergenic 35.0%
!! GGATGAGTTCTAAACTTCTA+AGG - chr6.4:8845177-8845196 None:intergenic 35.0%
!! GTCAAGCTCTAAACATATAC+TGG - chr6.4:8843090-8843109 None:intergenic 35.0%
!! TTTTAAACACTGGTCTACCA+TGG - chr6.4:8842721-8842740 None:intergenic 35.0%
!!! ATTTTGAGTTACCATGCTCA+GGG + chr6.4:8839510-8839529 MS.gene48151:intron 35.0%
!!! GATTTTCAAGTACCAGTCTA+TGG + chr6.4:8843000-8843019 MS.gene48151:intron 35.0%
AACACCACAATCAATGTTGG+AGG - chr6.4:8841836-8841855 None:intergenic 40.0%
AAGCCTCTATTCTATGCACT+TGG + chr6.4:8844023-8844042 MS.gene48151:intron 40.0%
AAGTTAATCGGTAAAGTCGG+TGG - chr6.4:8844085-8844104 None:intergenic 40.0%
AATGTCCTTCTTGATGGAAC+AGG + chr6.4:8844574-8844593 MS.gene48151:CDS 40.0%
ACCCTAGTTTCTTTGACAAG+CGG + chr6.4:8840241-8840260 MS.gene48151:intron 40.0%
ACGTCAAGTGCGAAAACTTA+TGG - chr6.4:8839482-8839501 None:intergenic 40.0%
ATAGATGATGTTCTGCAACC+AGG + chr6.4:8842238-8842257 MS.gene48151:CDS 40.0%
ATGCTTACTGCCCATGTATT+AGG + chr6.4:8843493-8843512 MS.gene48151:intron 40.0%
CAACCAAACTCCAGATTACT+AGG - chr6.4:8840268-8840287 None:intergenic 40.0%
CAGTTAAACTTCTCCGTAGA+AGG - chr6.4:8841727-8841746 None:intergenic 40.0%
CATCGTACATTGCTATATGG+AGG + chr6.4:8844382-8844401 MS.gene48151:CDS 40.0%
CATGATGGTTAGTGAAATGG+AGG + chr6.4:8840970-8840989 MS.gene48151:intron 40.0%
CCAAACAAGGCCTAATACAT+GGG - chr6.4:8843506-8843525 None:intergenic 40.0%
CCGGCAATATACAGTTAGTA+TGG - chr6.4:8842155-8842174 None:intergenic 40.0%
CTACAGTGGATCAATTCGAT+AGG - chr6.4:8843033-8843052 None:intergenic 40.0%
CTACCATGGACAACCTATTA+AGG - chr6.4:8842707-8842726 None:intergenic 40.0%
CTACCTTAATAGGTTGTCCA+TGG + chr6.4:8842701-8842720 MS.gene48151:intron 40.0%
GATTGTGACTGTTGCAGTAA+TGG + chr6.4:8840674-8840693 MS.gene48151:intron 40.0%
GCTGACAAAAAGAGTCCAAA+TGG + chr6.4:8844421-8844440 MS.gene48151:CDS 40.0%
GGAAACACCACAATCAATGT+TGG - chr6.4:8841839-8841858 None:intergenic 40.0%
GGAAACACTTACCTGAACAT+TGG - chr6.4:8840838-8840857 None:intergenic 40.0%
GGAGACTTTAAGTGTGTGTT+TGG + chr6.4:8840124-8840143 MS.gene48151:intron 40.0%
GGTCTGTTCAAATTCTGCTA+CGG - chr6.4:8841114-8841133 None:intergenic 40.0%
GTAAAATCTCCACGTGATTC+AGG - chr6.4:8839359-8839378 None:intergenic 40.0%
GTCTGAGTTCATAAGCTCTT+TGG - chr6.4:8843740-8843759 None:intergenic 40.0%
GTTCCATCAAGAAGGACATT+GGG - chr6.4:8844574-8844593 None:intergenic 40.0%
TAGATGATGTTCTGCAACCA+GGG + chr6.4:8842239-8842258 MS.gene48151:CDS 40.0%
TAGGGATCATACAGTTCCAA+TGG - chr6.4:8841860-8841879 None:intergenic 40.0%
TATCTGAGTTCAGTTCCACT+CGG + chr6.4:8844175-8844194 MS.gene48151:intron 40.0%
TATGTTCTCCTGATGAGTTG+TGG + chr6.4:8840518-8840537 MS.gene48151:intron 40.0%
TCACAGACACTTCATATCGA+AGG + chr6.4:8841920-8841939 MS.gene48151:intron 40.0%
TCATGTCTAGTGTTTGTGTC+AGG + chr6.4:8842061-8842080 MS.gene48151:intron 40.0%
TCCAAACAAGGCCTAATACA+TGG - chr6.4:8843507-8843526 None:intergenic 40.0%
TCGCAGATCACAACATATAG+TGG - chr6.4:8841135-8841154 None:intergenic 40.0%
TCTTTGCAGATCCCAAAGAA+AGG + chr6.4:8843224-8843243 MS.gene48151:intron 40.0%
TGCTTAGACAGTGACTTAAC+TGG - chr6.4:8842913-8842932 None:intergenic 40.0%
TGGTAGCTATGATGATATCG+AGG + chr6.4:8845340-8845359 MS.gene48151:CDS 40.0%
TGGTTAGTGAAATGGAGGTT+TGG + chr6.4:8840975-8840994 MS.gene48151:intron 40.0%
TGTTCCATCAAGAAGGACAT+TGG - chr6.4:8844575-8844594 None:intergenic 40.0%
TGTTCTGCTGTTAACAAGGT+TGG + chr6.4:8839419-8839438 MS.gene48151:intron 40.0%
TTCATGGAACTAGCACTACT+AGG + chr6.4:8842637-8842656 MS.gene48151:intron 40.0%
TTCCAAACTCCAAAAACGAC+AGG - chr6.4:8842979-8842998 None:intergenic 40.0%
TTGCAGTTTGTGATAACCAC+TGG + chr6.4:8842421-8842440 MS.gene48151:intron 40.0%
TTTGTCAGCAGGGTACAAAA+AGG - chr6.4:8844410-8844429 None:intergenic 40.0%
TTTGTGATAACCACTGGAAG+TGG + chr6.4:8842427-8842446 MS.gene48151:CDS 40.0%
! ATATCGAAGGCATGTATGTC+TGG + chr6.4:8841933-8841952 MS.gene48151:intron 40.0%
! ATTTTGTCGTGGTTGCATTG+TGG + chr6.4:8841562-8841581 MS.gene48151:intron 40.0%
! CTAGTAATCTGGAGTTTGGT+TGG + chr6.4:8840266-8840285 MS.gene48151:intron 40.0%
! CTCAGTTTTCAGACATGTGT+TGG + chr6.4:8839894-8839913 MS.gene48151:intron 40.0%
! CTTGGTTTCTGAAGAAGATG+AGG + chr6.4:8841427-8841446 MS.gene48151:CDS 40.0%
! TCTGAGACATGCCTAATAAG+AGG - chr6.4:8839872-8839891 None:intergenic 40.0%
! TTGGACTCTTTTTGTCAGCA+GGG - chr6.4:8844420-8844439 None:intergenic 40.0%
! TTTCAAGTACCAGTCTATGG+TGG + chr6.4:8843003-8843022 MS.gene48151:intron 40.0%
! TTTGGACTCTTTTTGTCAGC+AGG - chr6.4:8844421-8844440 None:intergenic 40.0%
!! ATACTGGTTTCGACCAAACT+AGG - chr6.4:8843074-8843093 None:intergenic 40.0%
!! GGGTCTTAGCCTTTTATGTT+TGG - chr6.4:8840184-8840203 None:intergenic 40.0%
!! TTCCAATGAGGTGTTTTGCA+AGG + chr6.4:8841293-8841312 MS.gene48151:CDS 40.0%
!!! GATTTTGAGTTACCATGCTC+AGG + chr6.4:8839509-8839528 MS.gene48151:intron 40.0%
AAAAAATGCGGTTGGGATGG+AGG - chr6.4:8844118-8844137 None:intergenic 45.0%
AACAACTTTCCACGCTGCTT+AGG - chr6.4:8841470-8841489 None:intergenic 45.0%
AACCACGACAAAATCGCTAC+TGG - chr6.4:8841556-8841575 None:intergenic 45.0%
AACTTTCGTTAGAGCTGAGC+AGG - chr6.4:8842585-8842604 None:intergenic 45.0%
AAGTCACTGTCTAAGCAACG+AGG + chr6.4:8842916-8842935 MS.gene48151:intron 45.0%
ACCAAGTCACCATAAAGACG+AGG - chr6.4:8842801-8842820 None:intergenic 45.0%
ACCATTAACACCACTTCCAG+TGG - chr6.4:8842440-8842459 None:intergenic 45.0%
AGCCTTGCAAAACACCTCAT+TGG - chr6.4:8841298-8841317 None:intergenic 45.0%
AGGATAAACTCGCCAAGAGA+AGG - chr6.4:8842475-8842494 None:intergenic 45.0%
AGTCACTGTCTAAGCAACGA+GGG + chr6.4:8842917-8842936 MS.gene48151:intron 45.0%
ATACATCACATTGGTCCGAG+TGG - chr6.4:8844193-8844212 None:intergenic 45.0%
ATAGGTGATCCACCATAGAC+TGG - chr6.4:8843015-8843034 None:intergenic 45.0%
ATCAGTGTCCATGTCATGTC+CGG + chr6.4:8839719-8839738 MS.gene48151:intron 45.0%
ATGAAGGGAATGCCAAGAAC+TGG + chr6.4:8843264-8843283 MS.gene48151:CDS 45.0%
ATGCATTACCCTTTCCTTGC+CGG - chr6.4:8844618-8844637 None:intergenic 45.0%
CAAAGCTCTTTATGCTGCAG+AGG + chr6.4:8845367-8845386 MS.gene48151:CDS 45.0%
CACACATTTCTGTGTCATGC+CGG - chr6.4:8841985-8842004 None:intergenic 45.0%
CAGCAGATCCCGTATTGTAA+TGG - chr6.4:8842399-8842418 None:intergenic 45.0%
CATGAAGCACGAACACTTCT+CGG + chr6.4:8839613-8839632 MS.gene48151:intron 45.0%
CATTACAATACGGGATCTGC+TGG + chr6.4:8842397-8842416 MS.gene48151:intron 45.0%
CCCGCTTGTCAAAGAAACTA+GGG - chr6.4:8840245-8840264 None:intergenic 45.0%
CCCTAGTTTCTTTGACAAGC+GGG + chr6.4:8840242-8840261 MS.gene48151:intron 45.0%
CCTAACTCACCCTGACATTA+AGG + chr6.4:8842492-8842511 MS.gene48151:CDS 45.0%
CCTTAATGTCAGGGTGAGTT+AGG - chr6.4:8842495-8842514 None:intergenic 45.0%
CTCTGATACCACAACTCATC+AGG - chr6.4:8840529-8840548 None:intergenic 45.0%
CTGAATTCATACGTACGCAG+CGG - chr6.4:8843300-8843319 None:intergenic 45.0%
CTTCCCAATGTCCTTCTTGA+TGG + chr6.4:8844568-8844587 MS.gene48151:CDS 45.0%
GCAGCTGGTTATTGCATGTA+CGG + chr6.4:8842274-8842293 MS.gene48151:CDS 45.0%
GCTGGATGTTCTTTCCAATG+AGG + chr6.4:8841281-8841300 MS.gene48151:CDS 45.0%
GGATAAACTCGCCAAGAGAA+GGG - chr6.4:8842474-8842493 None:intergenic 45.0%
GGCTGAAGAGACATCAAAAG+TGG + chr6.4:8840045-8840064 MS.gene48151:intron 45.0%
TCCTCGTCTTTATGGTGACT+TGG + chr6.4:8842797-8842816 MS.gene48151:intron 45.0%
TCTAAGCATCCTGAATCACG+TGG + chr6.4:8839347-8839366 MS.gene48151:CDS 45.0%
TCTGCTGTTAACAAGGTTGG+TGG + chr6.4:8839422-8839441 MS.gene48151:intron 45.0%
TGAAGGGAATGCCAAGAACT+GGG + chr6.4:8843265-8843284 MS.gene48151:CDS 45.0%
TGTGAGCTTCTACTGCCAAT+GGG - chr6.4:8842776-8842795 None:intergenic 45.0%
TGTGAGCTTCTACTTCCAGA+AGG + chr6.4:8842948-8842967 MS.gene48151:intron 45.0%
TTTCTGTGTCATGCCGGTAT+CGG - chr6.4:8841979-8841998 None:intergenic 45.0%
TTTGCTGGTGAACCATCTGT+TGG - chr6.4:8843417-8843436 None:intergenic 45.0%
! AATCTGGAGTTTGGTTGGGA+GGG + chr6.4:8840271-8840290 MS.gene48151:intron 45.0%
! ACCACTGGAAGTGGTGTTAA+TGG + chr6.4:8842436-8842455 MS.gene48151:CDS 45.0%
! ACTCTTCACTAATGGGTCAG+TGG - chr6.4:8843952-8843971 None:intergenic 45.0%
! GCTCAGCTCTAACGAAAGTT+GGG + chr6.4:8842585-8842604 MS.gene48151:intron 45.0%
! TAATCTGGAGTTTGGTTGGG+AGG + chr6.4:8840270-8840289 MS.gene48151:intron 45.0%
! TGCAAGGCTTTGATAAGCAG+TGG + chr6.4:8841309-8841328 MS.gene48151:CDS 45.0%
! TGCTCAGCTCTAACGAAAGT+TGG + chr6.4:8842584-8842603 MS.gene48151:intron 45.0%
! TTCCAGTAGCGATTTTGTCG+TGG + chr6.4:8841551-8841570 MS.gene48151:intron 45.0%
!! CCCATGTATTAGGCCTTGTT+TGG + chr6.4:8843503-8843522 MS.gene48151:intron 45.0%
!! CGAACTTGCTCATTTTGAGG+CGG + chr6.4:8842665-8842684 MS.gene48151:intron 45.0%
!!! AACTTGCTCATTTTGAGGCG+GGG + chr6.4:8842667-8842686 MS.gene48151:intron 45.0%
!!! AAGGCAATGCCTGTCGTTTT+TGG + chr6.4:8842967-8842986 MS.gene48151:intron 45.0%
!!! GAACTTGCTCATTTTGAGGC+GGG + chr6.4:8842666-8842685 MS.gene48151:intron 45.0%
!!! TGCCTGTCGTTTTTGGAGTT+TGG + chr6.4:8842974-8842993 MS.gene48151:intron 45.0%
AGCAGTGGCAGAACAGTAAG+TGG + chr6.4:8841324-8841343 MS.gene48151:intron 50.0%
ATGTTGGAGGAGCCGTCTAA+TGG - chr6.4:8841823-8841842 None:intergenic 50.0%
ATTCATACGTACGCAGCGGT+AGG - chr6.4:8843296-8843315 None:intergenic 50.0%
CATGTACGGAAGCTCTTGCA+CGG + chr6.4:8842288-8842307 MS.gene48151:CDS 50.0%
CTACTGCCAATGGGCGTATT+CGG - chr6.4:8842767-8842786 None:intergenic 50.0%
CTCAGGTTCTCCCAATCACT+TGG + chr6.4:8840336-8840355 MS.gene48151:intron 50.0%
GCAAAGCTCATTGGACTTGC+TGG + chr6.4:8840807-8840826 MS.gene48151:CDS 50.0%
GCCCGCTTGTCAAAGAAACT+AGG - chr6.4:8840246-8840265 None:intergenic 50.0%
GCTCACACTCCTCGTCTTTA+TGG + chr6.4:8842789-8842808 MS.gene48151:intron 50.0%
GCTGCTAACATGTTCTTCCC+TGG - chr6.4:8842259-8842278 None:intergenic 50.0%
GGGAAGAACATGTTAGCAGC+TGG + chr6.4:8842259-8842278 MS.gene48151:CDS 50.0%
GTCTCCACAACAACGCAGAT+TGG - chr6.4:8840110-8840129 None:intergenic 50.0%
GTGTGAGCTTCTACTGCCAA+TGG - chr6.4:8842777-8842796 None:intergenic 50.0%
TCCTGCCTGTTCCATCAAGA+AGG - chr6.4:8844582-8844601 None:intergenic 50.0%
TCCTTCTTGATGGAACAGGC+AGG + chr6.4:8844578-8844597 MS.gene48151:CDS 50.0%
TGCTGGAGAGACCAATGTTC+AGG + chr6.4:8840824-8840843 MS.gene48151:CDS 50.0%
TTCACTCTCGACCCTTCTCT+TGG + chr6.4:8842460-8842479 MS.gene48151:CDS 50.0%
TTCTTGATGGAACAGGCAGG+AGG + chr6.4:8844581-8844600 MS.gene48151:CDS 50.0%
TTTGTGGATCCTAAGCAGCG+TGG + chr6.4:8841458-8841477 MS.gene48151:CDS 50.0%
! AAACGACAGGCATTGCCTTC+TGG - chr6.4:8842966-8842985 None:intergenic 50.0%
! GGCTCCTCCAACATTGATTG+TGG + chr6.4:8841829-8841848 MS.gene48151:CDS 50.0%
! GGGCCTAGTAATCTGGAGTT+TGG + chr6.4:8840262-8840281 MS.gene48151:intron 50.0%
! GTGTGTGTTTGGAATTGCGG+TGG + chr6.4:8840135-8840154 MS.gene48151:intron 50.0%
!! GCTGGTCTTGCAAAGCTCAT+TGG + chr6.4:8840798-8840817 MS.gene48151:CDS 50.0%
ACGGATACGGACACAGACAC+CGG - chr6.4:8839741-8839760 None:intergenic 55.0%
AGGCTTTCACCGGCAAGGAA+AGG + chr6.4:8844606-8844625 MS.gene48151:CDS 55.0%
ATCAGTGGTGACCCTGAGCA+TGG - chr6.4:8839524-8839543 None:intergenic 55.0%
CAACGACCGAATACGCCCAT+TGG + chr6.4:8842758-8842777 MS.gene48151:intron 55.0%
CACAGACACCGGACATGACA+TGG - chr6.4:8839730-8839749 None:intergenic 55.0%
CGTGTGTCTGTGTCCGATAC+CGG + chr6.4:8841963-8841982 MS.gene48151:intron 55.0%
GAAGCACGAACACTTCTCGG+AGG + chr6.4:8839616-8839635 MS.gene48151:intron 55.0%
GACAAGCGGGCCTAGTAATC+TGG + chr6.4:8840255-8840274 MS.gene48151:intron 55.0%
GCTGCCAATCTGCGTTGTTG+TGG + chr6.4:8840103-8840122 MS.gene48151:intron 55.0%
GGCTTTCACCGGCAAGGAAA+GGG + chr6.4:8844607-8844626 MS.gene48151:CDS 55.0%
GGGAATGCCAAGAACTGGGA+TGG + chr6.4:8843269-8843288 MS.gene48151:CDS 55.0%
GGGTGAAGAGCAGAAGAAGC+TGG + chr6.4:8841263-8841282 MS.gene48151:intron 55.0%
GGTAGGACCATCCCAGTTCT+TGG - chr6.4:8843279-8843298 None:intergenic 55.0%
TACGATGTGCATCTGCGCTG+TGG - chr6.4:8839286-8839305 None:intergenic 55.0%
TTCGTTAGAGCTGAGCAGGC+AGG - chr6.4:8842581-8842600 None:intergenic 55.0%
AGGACAGGCTTTCACCGGCA+AGG + chr6.4:8844601-8844620 MS.gene48151:CDS 60.0%
GATGGAACAGGCAGGAGGAC+AGG + chr6.4:8844586-8844605 MS.gene48151:CDS 60.0%
GCAGGAGGACAGGCTTTCAC+CGG + chr6.4:8844596-8844615 MS.gene48151:CDS 60.0%
TTAGAGCTGAGCAGGCAGGC+AGG - chr6.4:8842577-8842596 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 8839278 8845397 8839278 ID=MS.gene48151
chr6.4 mRNA 8839278 8845397 8839278 ID=MS.gene48151.t1;Parent=MS.gene48151
chr6.4 exon 8839278 8839436 8839278 ID=MS.gene48151.t1.exon1;Parent=MS.gene48151.t1
chr6.4 CDS 8839278 8839436 8839278 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8840798 8840845 8840798 ID=MS.gene48151.t1.exon2;Parent=MS.gene48151.t1
chr6.4 CDS 8840798 8840845 8840798 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8841264 8841338 8841264 ID=MS.gene48151.t1.exon3;Parent=MS.gene48151.t1
chr6.4 CDS 8841264 8841338 8841264 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8841422 8841483 8841422 ID=MS.gene48151.t1.exon4;Parent=MS.gene48151.t1
chr6.4 CDS 8841422 8841483 8841422 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8841801 8841867 8841801 ID=MS.gene48151.t1.exon5;Parent=MS.gene48151.t1
chr6.4 CDS 8841801 8841867 8841801 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8842196 8842309 8842196 ID=MS.gene48151.t1.exon6;Parent=MS.gene48151.t1
chr6.4 CDS 8842196 8842309 8842196 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8842427 8842513 8842427 ID=MS.gene48151.t1.exon7;Parent=MS.gene48151.t1
chr6.4 CDS 8842427 8842513 8842427 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8843233 8843303 8843233 ID=MS.gene48151.t1.exon8;Parent=MS.gene48151.t1
chr6.4 CDS 8843233 8843303 8843233 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8843392 8843457 8843392 ID=MS.gene48151.t1.exon9;Parent=MS.gene48151.t1
chr6.4 CDS 8843392 8843457 8843392 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8844366 8844452 8844366 ID=MS.gene48151.t1.exon10;Parent=MS.gene48151.t1
chr6.4 CDS 8844366 8844452 8844366 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8844553 8844628 8844553 ID=MS.gene48151.t1.exon11;Parent=MS.gene48151.t1
chr6.4 CDS 8844553 8844628 8844553 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
chr6.4 exon 8845290 8845397 8845290 ID=MS.gene48151.t1.exon12;Parent=MS.gene48151.t1
chr6.4 CDS 8845290 8845397 8845290 ID=cds.MS.gene48151.t1;Parent=MS.gene48151.t1
Gene Sequence

>MS.gene48151

ATGGACCACAGCGCAGATGCACATCGTACAGACTTGATGACCATAACACGTTTTGTGTTGAATGAACAGTCTAAGCATCCTGAATCACGTGGAGATTTTACCATCTTGCTTAATAACATTGTTCTTGGTTGCAAATTTGTTTGTTCTGCTGTTAACAAGGTTGGTGGTACCTTCACTCTTTTTTTGTTTTGTTTTCATTTTCCATAAGTTTTCGCACTTGACGTAATATGAGATTTTGAGTTACCATGCTCAGGGTCACCACTGATCATAATTCTATGTTTCATAATTAATCTAATAGTGTTTTAACATTTCCTTCAATAAAAAAAGTGTTTTAACATGAAGCACGAACACTTCTCGGAGGTCGTGTCTGACACCGACACATATAATTACACTGAATCATGTGATTTTGTCAAATTATCAAATTATTAGCAGTGTCGGCGTATCAGTGTCCATGTCATGTCCGGTGTCTGTGTCCGTATCCGTGCTTCATTAAATATGGGAATATTGTTATCAAGATTCATTTTGTGGTTGTAGTGTTGTAATCTTTGATATTTGCATGATTAAAAAAGGTTGATATGGATTAAGGACACTCCTCTTATTAGGCATGTCTCAGACTCTCAGTTTTCAGACATGTGTTGGTGTCAAACACCGACATAAATTGTTACATTGAAATATGTTATTTTCTTAAATTATTATCAGTGTCGACGTGTTAGTGTTTGTGTTGTATCTGGTGTCTCTGCATGTGTCCGTGATTGATATACAATTATGGCTGAAGAGACATCAAAAGTGGTTTTACTTTTACATTGCCGTTGTAATTGTGGTTAAGCTGCCAATCTGCGTTGTTGTGGAGACTTTAAGTGTGTGTTTGGAATTGCGGTGGTTGAGCCATTATCGCATTTAGTACCAAACATAAAAGGCTAAGACCCTATTTGGATAAACAACTTAATTTTATTTGGTATTAACACCCTAGTTTCTTTGACAAGCGGGCCTAGTAATCTGGAGTTTGGTTGGGAGGGTAAGTAAAATCTAGTAAAAAATTGTTTCATCCAAAAATCAAACTCAGGTTCTCCCAATCACTTGGATAAACAACTTAGCATAAGAGCTTATCATGATAAGCGCTTATGTATAAGCTATTTCTGTAACAAAAAGATAAAATAAAAATTGTTTTCGTATAAGCTATTTTGGAGAACTTATGAAAGTAAGTTGAACACAGCTAATGAAATGTCAGAAACTGTTTTCATATGTTCTCCTGATGAGTTGTGGTATCAGAGACATCAGAAAGTGTTTTATGTTTTGAATAGTGTAGTTGTGGCAGTAATAGTATAATATAATTTGCAACTAAGATTTTAATTGTGGTCACATTGAGCTGATGCAACCACCAATATATTGAAGTCTTGATTGTGACTGTTGCAGTAATGGAACTGTGAATCTGTGATTACAACTGCAATTTCTAGTTATGTTGATGATGATAATGAGATGTTAATGATATATTAAGTTATGAGATTTTGTTATATGTGTAGGCTGGTCTTGCAAAGCTCATTGGACTTGCTGGAGAGACCAATGTTCAGGTAAGTGTTTCCCAAACAAACTTATAAGTTTGCAGTGAAATAATTTATGTAAGAATATTTTTACTTATTAAATTTGATTTAGAACTTGTGTAAAATTTTCAATTTTGAGAAAATACTACTTTTTCATGATGGTTAGTGAAATGGAGGTTTGGATATAAAATCACTTTTGATTGATGATGGTAATCAAAAGTCAGTATCTTACTAAATTAATTGTTAGGAGATGAAATCGTAATGCCAAATAGCAGCTAAAGCAATGTAGTATGTACCGTAGCAGAATTTGAACAGACCACTATATGTTGTGATCTGCGATTAACAACGTTGAGATGAAATCAATTTGGACACTCGCTATTGAAACCAAACACACATGAACAATTTGGTGTCATTTTTAATGTACTTTTCTTTATTGTTTGGAATGAAGGGTGAAGAGCAGAAGAAGCTGGATGTTCTTTCCAATGAGGTGTTTTGCAAGGCTTTGATAAGCAGTGGCAGAACAGTAAGTGGTTAATCATCATTTTTCGCAGTGTATTGAAGAACTAAGTTTAATAGCTTTTGATGATGGTAATTATGTTTTAACAGTGCATCTTGGTTTCTGAAGAAGATGAGGATGCAATATTTGTGGATCCTAAGCAGCGTGGAAAGTTGTTCACTCTCTCTGTTCTATAGTAGTGTCAATTTTTCCCATATATTCTCTAAGAAGGTTTTAAGTTCCAGTAGCGATTTTGTCGTGGTTGCATTGTGGCCATGATGTTGTTGTAATCAAGGTTTTGATTGAATTGCGATATGCACTGTGATCAAAATTGTGACTGCATCAGTTGTATTTACTTGTACTTTACATCGTCAAGCATTGTGTCGCATGACATGATGTTGACAGTCTAAAACCTTCTACGGAGAAGTTTAACTGTGATTTTTTGGTCTGATTAGTTAACACAGTCTTCTATTTTTTATTACGATTCAGGTACTGTGTTGTTTTTGATCCATTAGACGGCTCCTCCAACATTGATTGTGGTGTTTCCATTGGAACTGTATGATCCCTAATCCCTACTCAAATTTGTCTTGCAATTTTGTAACTATGTATCACAGACACTTCATATCGAAGGCATGTATGTCTGGTGTTCAACGTGTGTCTGTGTCCGATACCGGCATGACACAGAAATGTGTGTTTACATTAGATTACTTTCATTTTCTCAAATTATTACATGTGTCGATGTATCAGTTTCATGTCTAGTGTTTGTGTCAGGCTTCATAGATTTTGTTCTACTACGACTATTGTTACTGTTCTTGTTATATGTGTAGAAGGATTGATATTCCATACTAACTGTATATTGCCGGTGTCAATTGAACATTTTGCAGATTTTTGGGATTTATATGATGAAAGATAACCATGAACCAATCATAGATGATGTTCTGCAACCAGGGAAGAACATGTTAGCAGCTGGTTATTGCATGTACGGAAGCTCTTGCACGGTATAATAATATTAATAAACTTGTATGCTTGTTCATTGATTGCGATTTTTTAAGTCTTCATTCTAAAACTACAATGCTTAATTACTCCATTACAATACGGGATCTGCTGGTTTGCAGTTTGTGATAACCACTGGAAGTGGTGTTAATGGTTTCACTCTCGACCCTTCTCTTGGCGAGTTTATCCTAACTCACCCTGACATTAAGGTATATTCTGCTAACTTACAGAACACTTTATAAGTCAGTTATTTTCTCTTGATATGATTACCTGCCTGCCTGCTCAGCTCTAACGAAAGTTGGGATCTTCTTAAGTTTCTATTTGCTTAAAACTTCATGGAACTAGCACTACTAGGTTATACGAACTTGCTCATTTTGAGGCGGGGTCTAAAGTTGACTACCTTAATAGGTTGTCCATGGTAGACCAGTGTTTAAAAATCACTCGGAAATCTAACAACGACCGAATACGCCCATTGGCAGTAGAAGCTCACACTCCTCGTCTTTATGGTGACTTGGTTAGTGTCAATTCGACAAATTCAAGGAAAAACAAATATGAGTTGAGTTTGCAAGCATATTCGTTTCTCCTTGTTTTTTATTGAACTGACGCCAGTTAAGTCACTGTCTAAGCAACGAGGGCAAGAAGATGTGAGCTTCTACTTCCAGAAGGCAATGCCTGTCGTTTTTGGAGTTTGGAATGATTTTCAAGTACCAGTCTATGGTGGATCACCTATCGAATTGATCCACTGTAGAATTTGCCTTATTTTTATCCTAGTTTGGTCGAAACCAGTATATGTTTAGAGCTTGACCTCTGCTCTCTATTAATGTTTACCTATCTATAATGCAAACTTATTGTAATATTCAAATAGGGTATAAAGTCATATACATCAACACCATTTATGTTAATTGTTGGTGTGTGGTTCTCTTTGCAGATCCCAAAGAAAGGCAAGATTTATTCAGTGAATGAAGGGAATGCCAAGAACTGGGATGGTCCTACCGCTGCGTACGTATGAATTCAGTAATGTTTATAATGTTTTCAAGCACTAAGATTGAAAATTTAACAATGGTGTAATTTGTTTTTCTTATTACAGTTATGTGGAGAAATGCAAGTTTCCAACAGATGGTTCACCAGCAAAGTCTCTTAGATATATTGGAAGGTATTGCAGATTCTCAACCCTAGAAAGAGTCTAACATGCTTACTGCCCATGTATTAGGCCTTGTTTGGATAAAATAAACAAATATTCATTTTATAACATAAGCATCACGATAAGTACTTATATATAAGCTATTTCTATAACCAAAGCTTATAGCAATAGCTATTTCTACAAGCTATTTCTATAGTTAGATTGTTTTCCAATAAGCTATAAGTTGTTTTCATTAGCTAACCAAAGAGCTTATTGTTTTCCTGTAAGAAATAAGTTGTTTTTATTTGCTAACCAAAGAGCTTATGAACTCAGACAACTGCATCAAGCTGTAGACTGTGTAGAGTACTAGAGTCTATAATTATTAATGGTTGTTTTAATCAACAATTTCTAGTTTCACCAAAATCATCAATTATCTTTCATGAATTTTCATGCTTTTGTGTGGAACCATTTTTCAGCTTCTTGAGTCTGCATGTGATCTGTTCATAACTCTTGGAATTTTGTGTCCACTGACCCATTAGTGAAGAGTGTATGTATTCCTCATTAGTTATTGCCCACAAAAGTTGAAACAATTGGACTTAAGCCTCTATTCTATGCACTTGGTTTTATTTTTACAACCCTGTTATTGGTGTAAAGTATCCACCGACTTTACCGATTAACTTTTAGTGAAATCCTCCATCCCAACCGCATTTTTTTTATTCACAAAACTCGAACCCGAGACCTTACTTAAGATATCTGAGTTCAGTTCCACTCGGACCAATGTGATGTATACTTGTTTTAGTTTGTCATTTGTGATACTTAATAGTTTTTAAACAATAATTTAAGCTGAATAGTTAGTTTTTTGAGCTTCATCTACAAAAAAAAAAGTTTATTTAAGTTTCAACAACTTTTTTCATCTTATGATATTTTTGTACATTAAACAGCATGGTAGCTGATGTTCATCGTACATTGCTATATGGAGGTACCTTTTTGTACCCTGCTGACAAAAAGAGTCCAAATGGAAAACTTCGGTATGTTAAATTTAACCTCAATGTTTAAGCTAATATAATTTGTATTTGGTCTAATTATTTTAATTTTGATGGCTTAATTTAATTAATATTTTTAATGCAGTGTATTGTATGAAGTCTTCCCAATGTCCTTCTTGATGGAACAGGCAGGAGGACAGGCTTTCACCGGCAAGGAAAGGGTAATGCATCTTTATTGATTAATTTTTTTTTTTCTTCGAAAAATATATAGGTTAAATTGTGTTTGTTTACCATAATAAAAATCACTTTTTAAAAAGAAGCTACTCAACAATTTCTCATTTTAAATAGGTTTTAGATTTTTCTTTTTTCTGCAGGTTCTCTTTTTCATTTTTTAATAATATGTAACCATATGATGCAAACTTCTAAAAGCAATTGTTTTGTTTTAAAAAGTGACTTTTACAAAAAAGAAATTATAATAAACGAACCCTAATCCAATAAAACGATATTTGTTGAAAAGAATTTATTTTTACGGAAATAAACTTAGTGCATTTGATTCATAATAAGAGTAGAGATACATGGAAGAGATTTCAATAAAAGTATGGAAATTAGCATAACGTGGAGCTACCCTAACTAAGCTATGAGCAACTACATTGACTAGTCTCCGAACAAACTTTACATCAGAGTTCACTAAATCAGAAGCTAACAGACACCATCATATTTTTTTTTTCCTTCTTATAAATGTCTAATAAGGATCCTTTTTTGAATTCCTTAGAAGTTTAGAACTCATCCAACATGCTGATTTTACTACTTTAGCTGTGTGTTTTTAAACTATGATGAAAGCTTCATTTTTCCAATCAACTGATGAATCTTCTATGATATCAGGCACTTGATTTAATTCCAACAAAATTGCATGAAAGATCTCCGATATTTCTTGGTAGCTATGATGATATCGAGGAAATCAAAGCTCTTTATGCTGCAGAGGCTAAATAA

Protein sequence

>MS.gene48151.t1

MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLNNIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFCKALISSGRTCILVSEEDEDAIFVDPKQRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMMKDNHEPIIDDVLQPGKNMLAAGYCMYGSSCTFVITTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAAYVEKCKFPTDGSPAKSLRYIGSMVADVHRTLLYGGTFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKERALDLIPTKLHERSPIFLGSYDDIEEIKALYAAEAK