Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56857.t1 | XP_013457783.1 | 96.2 | 262 | 8 | 1 | 1 | 260 | 1 | 262 | 8.30E-136 | 493 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56857.t1 | Q9CWP6 | 27.9 | 229 | 152 | 8 | 38 | 257 | 6 | 230 | 7.3e-16 | 85.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56857.t1 | A0A072UPQ7 | 96.2 | 262 | 8 | 1 | 1 | 260 | 1 | 262 | 6.0e-136 | 493.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene56857 | 0.804467 | 2.13E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene56857 | 0.817639 | 2.97E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene56857 | 0.826357 | 2.84E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene56857 | 0.826748 | 2.29E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene56857 | 0.813523 | 2.45E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene56857 | 0.813269 | 2.79E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene56857 | 0.803289 | 3.74E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene56857 | 0.802037 | 6.78E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene56857 | 0.857351 | 1.73E-62 | -1.69E-46 |
| MS.gene050076 | MS.gene56857 | 0.80095 | 1.13E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene56857 | 0.807749 | 4.34E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene56857 | 0.8328 | 7.69E-56 | -1.69E-46 |
| MS.gene050432 | MS.gene56857 | 0.832203 | 1.08E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene56857 | 0.837302 | 5.63E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene56857 | 0.840014 | 1.12E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene56857 | 0.867372 | 1.44E-65 | -1.69E-46 |
| MS.gene050670 | MS.gene56857 | 0.856853 | 2.43E-62 | -1.69E-46 |
| MS.gene050686 | MS.gene56857 | 0.802665 | 5.04E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene56857 | 0.806244 | 9.04E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene56857 | 0.81985 | 9.35E-53 | -1.69E-46 |
| MS.gene050971 | MS.gene56857 | 0.805471 | 1.31E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene56857 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene56857 | 0.830388 | 3.02E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene56857 | 0.852037 | 6.00E-61 | -1.69E-46 |
| MS.gene051525 | MS.gene56857 | 0.801421 | 9.07E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene56857 | 0.85739 | 1.69E-62 | -1.69E-46 |
| MS.gene051692 | MS.gene56857 | 0.839684 | 1.37E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene56857 | 0.82793 | 1.19E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene56857 | 0.808622 | 2.83E-50 | -1.69E-46 |
| MS.gene051877 | MS.gene56857 | 0.833973 | 3.92E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene56857 | 0.81529 | 9.97E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene56857 | 0.835335 | 1.78E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene56857 | 0.821405 | 4.11E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene56857 | 0.849389 | 3.34E-60 | -1.69E-46 |
| MS.gene052322 | MS.gene56857 | 0.803761 | 2.99E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene56857 | 0.830385 | 3.02E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene56857 | 0.821704 | 3.50E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene56857 | 0.834294 | 3.26E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene56857 | 0.842195 | 3.00E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene56857 | 0.846801 | 1.73E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene56857 | 0.855551 | 5.85E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene56857 | 0.864764 | 9.61E-65 | -1.69E-46 |
| MS.gene053209 | MS.gene56857 | 0.812885 | 3.39E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene56857 | 0.833963 | 3.94E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene56857 | 0.869833 | 2.30E-66 | -1.69E-46 |
| MS.gene053557 | MS.gene56857 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene56857 | 0.801763 | 7.72E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene56857 | 0.819186 | 1.33E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene56857 | 0.80643 | 8.26E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene56857 | 0.813102 | 3.03E-51 | -1.69E-46 |
| MS.gene054955 | MS.gene56857 | 0.876297 | 1.56E-68 | -1.69E-46 |
| MS.gene05505 | MS.gene56857 | 0.836331 | 9.96E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene56857 | 0.835372 | 1.74E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene56857 | 0.830903 | 2.26E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene56857 | 0.819414 | 1.18E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene56857 | 0.810111 | 1.36E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene56857 | 0.808206 | 3.47E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene56857 | 0.816221 | 6.18E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene56857 | 0.840799 | 6.99E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene56857 | 0.852923 | 3.36E-61 | -1.69E-46 |
| MS.gene056191 | MS.gene56857 | 0.806872 | 6.66E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene56857 | 0.831997 | 1.22E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene56857 | 0.824809 | 6.60E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene56857 | 0.839939 | 1.17E-57 | -1.69E-46 |
| MS.gene056511 | MS.gene56857 | 0.887738 | 1.10E-72 | -1.69E-46 |
| MS.gene056609 | MS.gene56857 | 0.818948 | 1.50E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene56857 | 0.828748 | 7.57E-55 | -1.69E-46 |
| MS.gene057123 | MS.gene56857 | 0.818432 | 1.97E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene56857 | 0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene56857 | 0.874991 | 4.38E-68 | -1.69E-46 |
| MS.gene057285 | MS.gene56857 | 0.811596 | 6.47E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene56857 | 0.823945 | 1.05E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene56857 | 0.8061 | 9.69E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene56857 | 0.838829 | 2.28E-57 | -1.69E-46 |
| MS.gene057448 | MS.gene56857 | 0.83505 | 2.10E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene56857 | 0.84019 | 1.01E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene56857 | 0.838321 | 3.08E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene56857 | 0.827177 | 1.81E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene56857 | 0.806068 | 9.84E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene56857 | 0.821976 | 3.03E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene56857 | 0.83654 | 8.81E-57 | -1.69E-46 |
| MS.gene057927 | MS.gene56857 | 0.823514 | 1.33E-53 | -1.69E-46 |
| MS.gene058006 | MS.gene56857 | 0.832872 | 7.38E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene56857 | 0.805803 | 1.12E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene56857 | 0.82816 | 1.05E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene56857 | 0.826565 | 2.53E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene56857 | 0.820502 | 6.63E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene56857 | 0.805001 | 1.65E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene56857 | 0.805585 | 1.24E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene56857 | 0.852451 | 4.58E-61 | -1.69E-46 |
| MS.gene058700 | MS.gene56857 | 0.812288 | 4.57E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene56857 | 0.855638 | 5.51E-62 | -1.69E-46 |
| MS.gene05907 | MS.gene56857 | 0.853151 | 2.89E-61 | -1.69E-46 |
| MS.gene059326 | MS.gene56857 | 0.805006 | 1.64E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene56857 | 0.821195 | 4.59E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene56857 | 0.84379 | 1.13E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene56857 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene56857 | 0.874243 | 7.86E-68 | -1.69E-46 |
| MS.gene059597 | MS.gene56857 | 0.84218 | 3.03E-58 | -1.69E-46 |
| MS.gene05959 | MS.gene56857 | 0.80259 | 5.22E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene56857 | 0.864832 | 9.15E-65 | -1.69E-46 |
| MS.gene059688 | MS.gene56857 | 0.856659 | 2.77E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene56857 | 0.839941 | 1.17E-57 | -1.69E-46 |
| MS.gene059695 | MS.gene56857 | 0.8366 | 8.51E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene56857 | 0.833114 | 6.42E-56 | -1.69E-46 |
| MS.gene059807 | MS.gene56857 | 0.847211 | 1.33E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene56857 | 0.808899 | 2.47E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene56857 | 0.829216 | 5.83E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene56857 | 0.843772 | 1.14E-58 | -1.69E-46 |
| MS.gene060193 | MS.gene56857 | 0.829741 | 4.34E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene56857 | 0.862646 | 4.37E-64 | -1.69E-46 |
| MS.gene060804 | MS.gene56857 | 0.874631 | 5.81E-68 | -1.69E-46 |
| MS.gene060818 | MS.gene56857 | 0.912464 | 1.89E-83 | -1.69E-46 |
| MS.gene060835 | MS.gene56857 | 0.813231 | 2.84E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene56857 | 0.866604 | 2.52E-65 | -1.69E-46 |
| MS.gene061041 | MS.gene56857 | 0.86493 | 8.53E-65 | -1.69E-46 |
| MS.gene061049 | MS.gene56857 | 0.811747 | 6.00E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene56857 | -0.850429 | 1.71E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene56857 | 0.828412 | 9.12E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene56857 | 0.831346 | 1.76E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56857.t1 | MTR_4g105460 | 96.183 | 262 | 8 | 1 | 1 | 260 | 1 | 262 | 0.0 | 512 |
| MS.gene56857.t1 | MTR_4g105450 | 79.771 | 262 | 49 | 3 | 1 | 260 | 1 | 260 | 1.41e-152 | 426 |
| MS.gene56857.t1 | MTR_4g105460 | 93.659 | 205 | 10 | 2 | 1 | 203 | 1 | 204 | 1.87e-135 | 380 |
| MS.gene56857.t1 | MTR_6g037460 | 55.172 | 116 | 37 | 2 | 142 | 257 | 2 | 102 | 2.69e-30 | 110 |
| MS.gene56857.t1 | MTR_3g098530 | 34.146 | 164 | 104 | 3 | 68 | 229 | 66 | 227 | 1.27e-25 | 102 |
| MS.gene56857.t1 | MTR_8g096180 | 29.878 | 164 | 113 | 2 | 67 | 229 | 45 | 207 | 1.72e-24 | 98.6 |
| MS.gene56857.t1 | MTR_8g096170 | 29.268 | 164 | 114 | 2 | 67 | 229 | 48 | 210 | 7.11e-24 | 97.1 |
| MS.gene56857.t1 | MTR_8g096180 | 29.885 | 174 | 110 | 3 | 67 | 229 | 45 | 217 | 4.37e-23 | 95.1 |
| MS.gene56857.t1 | MTR_3g074050 | 28.662 | 157 | 110 | 1 | 75 | 231 | 55 | 209 | 9.74e-22 | 92.8 |
| MS.gene56857.t1 | MTR_3g074050 | 28.025 | 157 | 110 | 1 | 75 | 231 | 55 | 208 | 4.19e-21 | 90.9 |
| MS.gene56857.t1 | MTR_5g062310 | 29.341 | 167 | 113 | 3 | 75 | 239 | 52 | 215 | 1.46e-19 | 86.7 |
| MS.gene56857.t1 | MTR_3g074050 | 28.873 | 142 | 99 | 1 | 90 | 231 | 2 | 141 | 3.44e-19 | 84.3 |
| MS.gene56857.t1 | MTR_7g087500 | 29.560 | 159 | 110 | 1 | 72 | 230 | 47 | 203 | 1.77e-17 | 80.9 |
| MS.gene56857.t1 | MTR_5g062310 | 29.032 | 155 | 105 | 3 | 90 | 242 | 2 | 153 | 8.44e-17 | 78.2 |
| MS.gene56857.t1 | MTR_1g022185 | 28.042 | 189 | 125 | 5 | 75 | 255 | 49 | 234 | 7.95e-16 | 75.9 |
| MS.gene56857.t1 | MTR_8g077700 | 27.320 | 194 | 126 | 6 | 75 | 258 | 49 | 237 | 3.04e-14 | 71.2 |
| MS.gene56857.t1 | MTR_1g032580 | 26.486 | 185 | 127 | 5 | 51 | 229 | 12 | 193 | 5.02e-14 | 70.1 |
| MS.gene56857.t1 | MTR_8g077700 | 26.923 | 156 | 105 | 3 | 75 | 226 | 77 | 227 | 7.62e-14 | 70.5 |
| MS.gene56857.t1 | MTR_1g032580 | 27.132 | 129 | 88 | 3 | 105 | 229 | 19 | 145 | 1.73e-11 | 62.4 |
| MS.gene56857.t1 | MTR_1g104540 | 25.478 | 157 | 115 | 2 | 75 | 230 | 45 | 200 | 2.94e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56857.t1 | AT5G63060 | 65.984 | 244 | 78 | 1 | 16 | 259 | 24 | 262 | 3.59e-122 | 349 |
| MS.gene56857.t1 | AT5G63060 | 70.968 | 217 | 63 | 0 | 43 | 259 | 11 | 227 | 5.71e-119 | 339 |
| MS.gene56857.t1 | AT4G08690 | 27.778 | 162 | 115 | 1 | 69 | 230 | 43 | 202 | 2.00e-20 | 88.6 |
| MS.gene56857.t1 | AT4G08690 | 27.778 | 162 | 115 | 1 | 69 | 230 | 43 | 202 | 2.00e-20 | 88.6 |
| MS.gene56857.t1 | AT4G08690 | 27.778 | 162 | 115 | 1 | 69 | 230 | 43 | 202 | 2.00e-20 | 88.6 |
| MS.gene56857.t1 | AT1G01630 | 25.455 | 165 | 121 | 2 | 68 | 231 | 49 | 212 | 2.79e-19 | 84.7 |
| MS.gene56857.t1 | AT4G36640 | 26.702 | 191 | 131 | 4 | 75 | 258 | 47 | 235 | 2.06e-15 | 74.7 |
| MS.gene56857.t1 | AT4G36640 | 26.702 | 191 | 131 | 4 | 75 | 258 | 47 | 235 | 2.06e-15 | 74.7 |
| MS.gene56857.t1 | AT1G75170 | 27.317 | 205 | 139 | 6 | 62 | 258 | 36 | 238 | 2.80e-15 | 74.3 |
| MS.gene56857.t1 | AT1G75170 | 27.317 | 205 | 139 | 6 | 62 | 258 | 36 | 238 | 2.80e-15 | 74.3 |
| MS.gene56857.t1 | AT1G22180 | 26.994 | 163 | 117 | 1 | 72 | 234 | 49 | 209 | 6.80e-15 | 73.6 |
| MS.gene56857.t1 | AT1G22180 | 26.994 | 163 | 117 | 1 | 72 | 234 | 49 | 209 | 6.80e-15 | 73.6 |
| MS.gene56857.t1 | AT1G22180 | 26.897 | 145 | 104 | 1 | 90 | 234 | 2 | 144 | 4.84e-13 | 67.4 |
| MS.gene56857.t1 | AT1G22180 | 26.897 | 145 | 104 | 1 | 90 | 234 | 2 | 144 | 4.84e-13 | 67.4 |
| MS.gene56857.t1 | AT3G22410 | 26.316 | 171 | 123 | 3 | 68 | 236 | 30 | 199 | 5.61e-13 | 68.6 |
| MS.gene56857.t1 | AT1G05370 | 25.405 | 185 | 131 | 2 | 45 | 223 | 12 | 195 | 2.17e-12 | 66.6 |
Find 46 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCACAAACTTGGTTCTA+AGG | 0.250088 | 8.1:-17485838 | None:intergenic |
| TCTTAAATACTTAACGTTCT+TGG | 0.272685 | 8.1:+17487552 | MS.gene56857:CDS |
| AACTTTCAATCTCTGAAGTT+TGG | 0.282042 | 8.1:-17488822 | None:intergenic |
| ATATTTGATCTCAGAGGTTT+TGG | 0.288687 | 8.1:+17487514 | MS.gene56857:CDS |
| ATGATGAAGATATGATATTA+TGG | 0.341339 | 8.1:+17486119 | MS.gene56857:CDS |
| GGCTTGGTAAGCTGCCAAAT+TGG | 0.365127 | 8.1:-17487809 | None:intergenic |
| GTTAAAATCATATGCTTCTC+TGG | 0.375363 | 8.1:+17487835 | MS.gene56857:CDS |
| AGTCTTCCCCTTGGTAGAAA+TGG | 0.395833 | 8.1:+17486091 | MS.gene56857:CDS |
| AACATCTTTAACAGATTCTT+CGG | 0.397936 | 8.1:-17487001 | None:intergenic |
| GTGAGTCATTCGATTGCATT+TGG | 0.407407 | 8.1:-17485883 | None:intergenic |
| TCGATTGCATTTGGAGTTGA+AGG | 0.411981 | 8.1:-17485874 | None:intergenic |
| GCATTGAGTAAGCTTCCAAC+TGG | 0.432756 | 8.1:+17487472 | MS.gene56857:CDS |
| GTTAAAGATGTTGCTCAAAC+CGG | 0.436945 | 8.1:+17487012 | MS.gene56857:CDS |
| ATCCCTTAGAACCAAGTTTG+TGG | 0.438222 | 8.1:+17485835 | MS.gene56857:CDS |
| CAAATTGGTTTAAACACAAA+AGG | 0.442517 | 8.1:-17487794 | None:intergenic |
| TACAATGGCTTTAGTCAACT+TGG | 0.445382 | 8.1:-17486182 | None:intergenic |
| ATCTAGAAAGTCATGAATAT+AGG | 0.466876 | 8.1:-17487040 | None:intergenic |
| TTTCAATCTCTGAAGTTTGG+TGG | 0.495937 | 8.1:-17488819 | None:intergenic |
| TGAAGAAAGACGAGGAAGAG+TGG | 0.506217 | 8.1:-17485813 | None:intergenic |
| CATAACTTCTCATCGTCCGC+AGG | 0.519330 | 8.1:-17487430 | None:intergenic |
| ACTGGGAAAGAACAGATACT+TGG | 0.523097 | 8.1:+17487490 | MS.gene56857:CDS |
| GTAGTTAATTCTGGAAGTGA+AGG | 0.524383 | 8.1:+17486045 | MS.gene56857:intron |
| AGTACTTGAGACAGTCGCTT+CGG | 0.526049 | 8.1:-17487758 | None:intergenic |
| CTCTGCAGAGACGGTGAGGA+AGG | 0.526947 | 8.1:+17488773 | MS.gene56857:CDS |
| AGAGCTTCGAACCACAAACT+TGG | 0.531030 | 8.1:-17485846 | None:intergenic |
| GCTGCGACCACCACAAGCAC+AGG | 0.533870 | 8.1:-17487075 | None:intergenic |
| AAGACTGAATTGAATGGCGC+TGG | 0.535827 | 8.1:+17485769 | None:intergenic |
| AACCACAAACTTGGTTCTAA+GGG | 0.538296 | 8.1:-17485837 | None:intergenic |
| AGTATCTGTTCTTTCCCAGT+TGG | 0.541349 | 8.1:-17487487 | None:intergenic |
| ATCCCTACCATTTCTACCAA+GGG | 0.554955 | 8.1:-17486098 | None:intergenic |
| TCCCCTTGGTAGAAATGGTA+GGG | 0.561283 | 8.1:+17486096 | MS.gene56857:CDS |
| ACTGTCTCAAGTACTATTTG+TGG | 0.570730 | 8.1:+17487766 | MS.gene56857:CDS |
| GAATACTATAGTCTTCCCCT+TGG | 0.574819 | 8.1:+17486082 | MS.gene56857:CDS |
| CTTGGAATATTTGATCTCAG+AGG | 0.594486 | 8.1:+17487508 | MS.gene56857:CDS |
| TTCCCCTTGGTAGAAATGGT+AGG | 0.595469 | 8.1:+17486095 | MS.gene56857:CDS |
| CATCCCTACCATTTCTACCA+AGG | 0.611445 | 8.1:-17486099 | None:intergenic |
| ATAACTTCTCATCGTCCGCA+GGG | 0.626723 | 8.1:-17487429 | None:intergenic |
| CATTGAGTAAGCTTCCAACT+GGG | 0.632302 | 8.1:+17487473 | MS.gene56857:CDS |
| CAATGACAGACCTGTGCTTG+TGG | 0.634407 | 8.1:+17487065 | MS.gene56857:CDS |
| TTTGCTCTGCAGAGACGGTG+AGG | 0.644052 | 8.1:+17488769 | MS.gene56857:CDS |
| TCCCTACCATTTCTACCAAG+GGG | 0.670451 | 8.1:-17486097 | None:intergenic |
| TGACAGACCTGTGCTTGTGG+TGG | 0.674493 | 8.1:+17487068 | MS.gene56857:CDS |
| AGAAAGACGAGGAAGAGTGG+TGG | 0.678032 | 8.1:-17485810 | None:intergenic |
| GTCACAGGCACAGGACCCTG+CGG | 0.691722 | 8.1:+17487414 | MS.gene56857:intron |
| GCAATCGAATGACTCACGCA+AGG | 0.697867 | 8.1:+17485889 | MS.gene56857:CDS |
| CTAAGGGATGAAGAAAGACG+AGG | 0.703850 | 8.1:-17485821 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATATTTATATTGGT+GGG | + | chr8.1:17488557-17488576 | MS.gene56857:intron | 10.0% |
| !! | ACCAATATAAATATAAATTT+GGG | - | chr8.1:17488557-17488576 | None:intergenic | 10.0% |
| !! | ATAAAATTTATAAACATAGA+GGG | - | chr8.1:17486916-17486935 | None:intergenic | 10.0% |
| !! | GATATAAAGTAATTATAAAA+GGG | - | chr8.1:17487159-17487178 | None:intergenic | 10.0% |
| !! | TAATAAAAATCAATATTAAC+AGG | - | chr8.1:17486839-17486858 | None:intergenic | 10.0% |
| !! | TGATATAAAGTAATTATAAA+AGG | - | chr8.1:17487160-17487179 | None:intergenic | 10.0% |
| !! | AATTTATATTTATATTGGTG+GGG | + | chr8.1:17488558-17488577 | MS.gene56857:intron | 15.0% |
| !! | ATGAACATAAATTTATAAGT+GGG | + | chr8.1:17486621-17486640 | MS.gene56857:intron | 15.0% |
| !! | ATTAGTATATATTATGCTAA+GGG | + | chr8.1:17488475-17488494 | MS.gene56857:intron | 15.0% |
| !! | CAAATTTATATTTATATTGG+TGG | + | chr8.1:17488556-17488575 | MS.gene56857:intron | 15.0% |
| !! | CACCAATATAAATATAAATT+TGG | - | chr8.1:17488558-17488577 | None:intergenic | 15.0% |
| !! | CATAAAATTTATAAACATAG+AGG | - | chr8.1:17486917-17486936 | None:intergenic | 15.0% |
| !! | TATAATTAATAATTTCTCCT+GGG | + | chr8.1:17487301-17487320 | MS.gene56857:intron | 15.0% |
| !! | TATTAGTATATATTATGCTA+AGG | + | chr8.1:17488474-17488493 | MS.gene56857:intron | 15.0% |
| !! | TCCCAAATTTATATTTATAT+TGG | + | chr8.1:17488553-17488572 | MS.gene56857:intron | 15.0% |
| !! | TTATAATTAATAATTTCTCC+TGG | + | chr8.1:17487300-17487319 | MS.gene56857:intron | 15.0% |
| !!! | TAAGTTGAATAATTGTTATT+GGG | - | chr8.1:17485954-17485973 | None:intergenic | 15.0% |
| !! | AAATATACATCTATAAGTGA+GGG | + | chr8.1:17486425-17486444 | MS.gene56857:intron | 20.0% |
| !! | AATCAAAGAGAATATAAATG+TGG | + | chr8.1:17487204-17487223 | MS.gene56857:intron | 20.0% |
| !! | ATGATGAAGATATGATATTA+TGG | + | chr8.1:17486119-17486138 | MS.gene56857:CDS | 20.0% |
| !! | ATTTATATTTATATTGGTGG+GGG | + | chr8.1:17488559-17488578 | MS.gene56857:intron | 20.0% |
| !! | CATGAACATAAATTTATAAG+TGG | + | chr8.1:17486620-17486639 | MS.gene56857:intron | 20.0% |
| !! | CCTGTAAAAGAAAATAAAAA+TGG | - | chr8.1:17488743-17488762 | None:intergenic | 20.0% |
| !! | GGACACAAATATTAAAATTT+GGG | - | chr8.1:17486696-17486715 | None:intergenic | 20.0% |
| !! | GTCATAGATCTTAAATTTAA+GGG | + | chr8.1:17487359-17487378 | MS.gene56857:intron | 20.0% |
| !! | TAAATATACATCTATAAGTG+AGG | + | chr8.1:17486424-17486443 | MS.gene56857:intron | 20.0% |
| !! | TGAACATAAATTTATAAGTG+GGG | + | chr8.1:17486622-17486641 | MS.gene56857:intron | 20.0% |
| !! | TGGACACAAATATTAAAATT+TGG | - | chr8.1:17486697-17486716 | None:intergenic | 20.0% |
| !! | TGTCATAGATCTTAAATTTA+AGG | + | chr8.1:17487358-17487377 | MS.gene56857:intron | 20.0% |
| !!! | CAAATTTTTCAATTTTATGC+AGG | + | chr8.1:17487269-17487288 | MS.gene56857:intron | 20.0% |
| !!! | CCATTTTTATTTTCTTTTAC+AGG | + | chr8.1:17488740-17488759 | MS.gene56857:intron | 20.0% |
| !!! | GAGTTCTAACTATAAATATT+TGG | - | chr8.1:17487597-17487616 | None:intergenic | 20.0% |
| !!! | GTAAGTTGAATAATTGTTAT+TGG | - | chr8.1:17485955-17485974 | None:intergenic | 20.0% |
| !!! | TGATATTTTGTAGTTAATTC+TGG | + | chr8.1:17486036-17486055 | MS.gene56857:intron | 20.0% |
| ! | AAAAAGATTGGAGTGATATA+AGG | - | chr8.1:17488599-17488618 | None:intergenic | 25.0% |
| ! | AAAAGTCAAACATAACAAGT+AGG | - | chr8.1:17487988-17488007 | None:intergenic | 25.0% |
| ! | AAACTCTCTTAACATCTAAA+AGG | + | chr8.1:17485981-17486000 | MS.gene56857:intron | 25.0% |
| ! | AAAGATTATTCAAGATCCAT+TGG | + | chr8.1:17486516-17486535 | MS.gene56857:intron | 25.0% |
| ! | AAAGTCAAACATAACAAGTA+GGG | - | chr8.1:17487987-17488006 | None:intergenic | 25.0% |
| ! | AACATCTTTAACAGATTCTT+CGG | - | chr8.1:17487004-17487023 | None:intergenic | 25.0% |
| ! | AACTCTCTTAACATCTAAAA+GGG | + | chr8.1:17485982-17486001 | MS.gene56857:intron | 25.0% |
| ! | AAGATTATTCAAGATCCATT+GGG | + | chr8.1:17486517-17486536 | MS.gene56857:intron | 25.0% |
| ! | ATCTAGAAAGTCATGAATAT+AGG | - | chr8.1:17487043-17487062 | None:intergenic | 25.0% |
| ! | ATGAAAGTAATCAAATGTGT+CGG | - | chr8.1:17486740-17486759 | None:intergenic | 25.0% |
| ! | CACATAAATAATTATGTCAC+AGG | + | chr8.1:17487399-17487418 | MS.gene56857:intron | 25.0% |
| ! | CCATTTCTAATAATGTAGAA+GGG | - | chr8.1:17486953-17486972 | None:intergenic | 25.0% |
| ! | CTAACATGTTTCTTTACTTT+GGG | + | chr8.1:17487708-17487727 | MS.gene56857:intron | 25.0% |
| ! | CTATAATTATGATGAGAAGA+AGG | - | chr8.1:17486209-17486228 | None:intergenic | 25.0% |
| ! | GAACATAAATTTATAAGTGG+GGG | + | chr8.1:17486623-17486642 | MS.gene56857:intron | 25.0% |
| ! | TACCATGATAAAATTTGAGT+TGG | - | chr8.1:17486494-17486513 | None:intergenic | 25.0% |
| ! | TATTTATAGTTAGAACTCCA+TGG | + | chr8.1:17487599-17487618 | MS.gene56857:intron | 25.0% |
| ! | TCTAACATGTTTCTTTACTT+TGG | + | chr8.1:17487707-17487726 | MS.gene56857:intron | 25.0% |
| ! | TCTTAAATACTTAACGTTCT+TGG | + | chr8.1:17487552-17487571 | MS.gene56857:CDS | 25.0% |
| ! | TTGTTTGATGAAGTTATTCA+TGG | + | chr8.1:17488069-17488088 | MS.gene56857:intron | 25.0% |
| ! | TTTATATTTATATTGGTGGG+GGG | + | chr8.1:17488560-17488579 | MS.gene56857:intron | 25.0% |
| !! | ACCATGATAAAATTTGAGTT+GGG | - | chr8.1:17486493-17486512 | None:intergenic | 25.0% |
| !! | ATGTGTTTTCTTAATTGAGA+AGG | + | chr8.1:17487450-17487469 | MS.gene56857:CDS | 25.0% |
| !! | ATTTAGAGTTTGCTTTATTG+AGG | + | chr8.1:17486259-17486278 | MS.gene56857:intron | 25.0% |
| !! | CAAATTGGTTTAAACACAAA+AGG | - | chr8.1:17487797-17487816 | None:intergenic | 25.0% |
| !! | CTTTTGTGTTTAAACCAATT+TGG | + | chr8.1:17487795-17487814 | MS.gene56857:CDS | 25.0% |
| !! | GAATAATTGTTATTGGGATA+TGG | - | chr8.1:17485948-17485967 | None:intergenic | 25.0% |
| !!! | ATCTTATAAGTTGGTATTGT+AGG | + | chr8.1:17486654-17486673 | MS.gene56857:intron | 25.0% |
| !!! | GAAGCATATGATTTTAACAT+CGG | - | chr8.1:17487833-17487852 | None:intergenic | 25.0% |
| !!! | TCTTATAAGTTGGTATTGTA+GGG | + | chr8.1:17486655-17486674 | MS.gene56857:intron | 25.0% |
| AGACACTTAACAACAAACAT+TGG | - | chr8.1:17486383-17486402 | None:intergenic | 30.0% | |
| AGATATTGAGGTTGTTAAGA+TGG | + | chr8.1:17488041-17488060 | MS.gene56857:intron | 30.0% | |
| AGTATATATTATGCTAAGGG+TGG | + | chr8.1:17488478-17488497 | MS.gene56857:intron | 30.0% | |
| ATGAAACCAAAACTTTCTCT+AGG | + | chr8.1:17487235-17487254 | MS.gene56857:intron | 30.0% | |
| ATGCCAAAATAGGAGTTATA+AGG | - | chr8.1:17488647-17488666 | None:intergenic | 30.0% | |
| ATTACCTTGCTGGAAATAAA+TGG | + | chr8.1:17487658-17487677 | MS.gene56857:intron | 30.0% | |
| ATTTATAAACATAGAGGGTC+TGG | - | chr8.1:17486911-17486930 | None:intergenic | 30.0% | |
| CAACAATCTTATGCCAAAAT+AGG | - | chr8.1:17488657-17488676 | None:intergenic | 30.0% | |
| CAAGTATACTCAAGATATTG+AGG | + | chr8.1:17488029-17488048 | MS.gene56857:intron | 30.0% | |
| CAATACCAACTTATAAGATG+AGG | - | chr8.1:17486653-17486672 | None:intergenic | 30.0% | |
| CCCTTCTACATTATTAGAAA+TGG | + | chr8.1:17486950-17486969 | MS.gene56857:intron | 30.0% | |
| CTAACTCAACCAAACAATAT+CGG | - | chr8.1:17486469-17486488 | None:intergenic | 30.0% | |
| GCCATTTCTAATAATGTAGA+AGG | - | chr8.1:17486954-17486973 | None:intergenic | 30.0% | |
| GGGATATAAAGTTAACTTAG+TGG | - | chr8.1:17488537-17488556 | None:intergenic | 30.0% | |
| GTATATATTATGCTAAGGGT+GGG | + | chr8.1:17488479-17488498 | MS.gene56857:intron | 30.0% | |
| GTTAAAATCATATGCTTCTC+TGG | + | chr8.1:17487835-17487854 | MS.gene56857:CDS | 30.0% | |
| TAACCTTCTACACTTACTTT+AGG | - | chr8.1:17487111-17487130 | None:intergenic | 30.0% | |
| TATAACCGATCTCTATGTAT+CGG | + | chr8.1:17486767-17486786 | MS.gene56857:intron | 30.0% | |
| TATATATTATGCTAAGGGTG+GGG | + | chr8.1:17488480-17488499 | MS.gene56857:intron | 30.0% | |
| TCATGAACACAAATCAAGTT+AGG | - | chr8.1:17487633-17487652 | None:intergenic | 30.0% | |
| TTTCCTAAAGTAAGTGTAGA+AGG | + | chr8.1:17487105-17487124 | MS.gene56857:intron | 30.0% | |
| ! | ACCCAACTCAAATTTTATCA+TGG | + | chr8.1:17486489-17486508 | MS.gene56857:intron | 30.0% |
| ! | ATATTTGATCTCAGAGGTTT+TGG | + | chr8.1:17487514-17487533 | MS.gene56857:CDS | 30.0% |
| ! | GACTTTTGCGTTTTTAATCA+TGG | + | chr8.1:17488001-17488020 | MS.gene56857:intron | 30.0% |
| ! | TCACCTTATAACTCCTATTT+TGG | + | chr8.1:17488641-17488660 | MS.gene56857:intron | 30.0% |
| !! | ATATGATTTTAACATCGGCT+TGG | - | chr8.1:17487828-17487847 | None:intergenic | 30.0% |
| !!! | CTATTTTGGCATAAGATTGT+TGG | + | chr8.1:17488655-17488674 | MS.gene56857:intron | 30.0% |
| AAGTGTGGCTTATATATGTC+TGG | + | chr8.1:17487920-17487939 | MS.gene56857:intron | 35.0% | |
| AATAATTATGTCACAGGCAC+AGG | + | chr8.1:17487405-17487424 | MS.gene56857:intron | 35.0% | |
| AATTCACAAGGTGAATGGTA+TGG | - | chr8.1:17488183-17488202 | None:intergenic | 35.0% | |
| ACATACCGATACATAGAGAT+CGG | - | chr8.1:17486775-17486794 | None:intergenic | 35.0% | |
| ACATAGAGATCGGTTATACA+AGG | - | chr8.1:17486765-17486784 | None:intergenic | 35.0% | |
| ACTGGGAAATGAGTGAAAAT+TGG | + | chr8.1:17486289-17486308 | MS.gene56857:intron | 35.0% | |
| ACTGTCTCAAGTACTATTTG+TGG | + | chr8.1:17487766-17487785 | MS.gene56857:CDS | 35.0% | |
| ACTTGAACCTCAAATTCACA+AGG | - | chr8.1:17488195-17488214 | None:intergenic | 35.0% | |
| ATACCTATGATTCAGTGAGA+CGG | - | chr8.1:17486810-17486829 | None:intergenic | 35.0% | |
| ATTCAAATCGAGACGTCATT+GGG | + | chr8.1:17488097-17488116 | MS.gene56857:intron | 35.0% | |
| CCAAAACTTTCTCTAGGTAA+AGG | + | chr8.1:17487241-17487260 | MS.gene56857:intron | 35.0% | |
| CTTGGAATATTTGATCTCAG+AGG | + | chr8.1:17487508-17487527 | MS.gene56857:CDS | 35.0% | |
| GAGTTATAAGGTGAATGAGT+TGG | - | chr8.1:17488635-17488654 | None:intergenic | 35.0% | |
| GCAATCCTCATCTTATAAGT+TGG | + | chr8.1:17486645-17486664 | MS.gene56857:intron | 35.0% | |
| GTTAAAGATGTTGCTCAAAC+CGG | + | chr8.1:17487012-17487031 | MS.gene56857:CDS | 35.0% | |
| TATTCAAATCGAGACGTCAT+TGG | + | chr8.1:17488096-17488115 | MS.gene56857:intron | 35.0% | |
| TGATGAGAAGAAGGATACAA+TGG | - | chr8.1:17486200-17486219 | None:intergenic | 35.0% | |
| TGTAGTGTAACTCGTGTTAA+TGG | - | chr8.1:17486717-17486736 | None:intergenic | 35.0% | |
| TGTTGTTAAGTGTCTCACTT+TGG | + | chr8.1:17486388-17486407 | MS.gene56857:intron | 35.0% | |
| TTAAGATCTATGACACACAC+TGG | - | chr8.1:17487353-17487372 | None:intergenic | 35.0% | |
| TTATAGTTAGAACTCCATGG+TGG | + | chr8.1:17487602-17487621 | MS.gene56857:intron | 35.0% | |
| ! | ATTTTCAGCACTGTTTGACA+TGG | + | chr8.1:17488712-17488731 | MS.gene56857:intron | 35.0% |
| ! | CCTTTACCTAGAGAAAGTTT+TGG | - | chr8.1:17487244-17487263 | None:intergenic | 35.0% |
| ! | GTAGTTAATTCTGGAAGTGA+AGG | + | chr8.1:17486045-17486064 | MS.gene56857:intron | 35.0% |
| ! | GTCATGAATATAGGCTTTTC+CGG | - | chr8.1:17487034-17487053 | None:intergenic | 35.0% |
| ! | TAGAGTTTGCTTTATTGAGG+AGG | + | chr8.1:17486262-17486281 | MS.gene56857:intron | 35.0% |
| ! | TTGCGTTTTTAATCATGGCA+TGG | + | chr8.1:17488006-17488025 | MS.gene56857:intron | 35.0% |
| !! | AACCACAAACTTGGTTCTAA+GGG | - | chr8.1:17485840-17485859 | None:intergenic | 35.0% |
| !! | ATAAGGTGAATGAGTTGGTT+TGG | - | chr8.1:17488630-17488649 | None:intergenic | 35.0% |
| !! | TAAGGTGAATGAGTTGGTTT+GGG | - | chr8.1:17488629-17488648 | None:intergenic | 35.0% |
| !! | TACAATGGCTTTAGTCAACT+TGG | - | chr8.1:17486185-17486204 | None:intergenic | 35.0% |
| !!! | GCATCAATTTTTAAGACCGA+AGG | + | chr8.1:17486352-17486371 | MS.gene56857:intron | 35.0% |
| AAGCCACACTTCAGTACAAA+GGG | - | chr8.1:17487911-17487930 | None:intergenic | 40.0% | |
| ACAAACATTGGACATGCCTT+CGG | - | chr8.1:17486371-17486390 | None:intergenic | 40.0% | |
| ACTGGGAAAGAACAGATACT+TGG | + | chr8.1:17487490-17487509 | MS.gene56857:CDS | 40.0% | |
| ACTTTCTCTAGGTAAAGGAC+AGG | + | chr8.1:17487246-17487265 | MS.gene56857:intron | 40.0% | |
| AGAACCTCCCTATTAAGATC+AGG | + | chr8.1:17488218-17488237 | MS.gene56857:intron | 40.0% | |
| AGTATCTGTTCTTTCCCAGT+TGG | - | chr8.1:17487490-17487509 | None:intergenic | 40.0% | |
| ATAAACATAGAGGGTCTGGT+TGG | - | chr8.1:17486907-17486926 | None:intergenic | 40.0% | |
| ATCCCTACCATTTCTACCAA+GGG | - | chr8.1:17486101-17486120 | None:intergenic | 40.0% | |
| ATCCCTTAGAACCAAGTTTG+TGG | + | chr8.1:17485835-17485854 | MS.gene56857:CDS | 40.0% | |
| CATGAACTACATTACCTTGC+TGG | + | chr8.1:17487648-17487667 | MS.gene56857:intron | 40.0% | |
| CATTGAGTAAGCTTCCAACT+GGG | + | chr8.1:17487473-17487492 | MS.gene56857:CDS | 40.0% | |
| CCATTCACCTTGTGAATTTG+AGG | + | chr8.1:17488185-17488204 | MS.gene56857:intron | 40.0% | |
| CCTCAAATTCACAAGGTGAA+TGG | - | chr8.1:17488188-17488207 | None:intergenic | 40.0% | |
| CCTTACAAGCCGATATTGTT+TGG | + | chr8.1:17486457-17486476 | MS.gene56857:intron | 40.0% | |
| GAATACTATAGTCTTCCCCT+TGG | + | chr8.1:17486082-17486101 | MS.gene56857:CDS | 40.0% | |
| GGAACCACCTGATCTTAATA+GGG | - | chr8.1:17488228-17488247 | None:intergenic | 40.0% | |
| GGAACCATTTATTTCCAGCA+AGG | - | chr8.1:17487665-17487684 | None:intergenic | 40.0% | |
| GTGAGTCATTCGATTGCATT+TGG | - | chr8.1:17485886-17485905 | None:intergenic | 40.0% | |
| TAAGCCACACTTCAGTACAA+AGG | - | chr8.1:17487912-17487931 | None:intergenic | 40.0% | |
| TGGAACCACCTGATCTTAAT+AGG | - | chr8.1:17488229-17488248 | None:intergenic | 40.0% | |
| TGGTATTGTAGGGTTGAGTT+AGG | + | chr8.1:17486665-17486684 | MS.gene56857:intron | 40.0% | |
| TGGTTCGAGTGAAAGAGTTA+AGG | - | chr8.1:17488517-17488536 | None:intergenic | 40.0% | |
| TGGTTGAGTAGGTGGAAATT+AGG | - | chr8.1:17486887-17486906 | None:intergenic | 40.0% | |
| TTCAAATCGAGACGTCATTG+GGG | + | chr8.1:17488098-17488117 | MS.gene56857:intron | 40.0% | |
| TTGGGGGAGAGAAAAAAGAT+TGG | - | chr8.1:17488611-17488630 | None:intergenic | 40.0% | |
| TTTATTGAGGAGGTGGAACT+GGG | + | chr8.1:17486272-17486291 | MS.gene56857:intron | 40.0% | |
| ! | AAGATTTTGCTCTGCAGAGA+CGG | + | chr8.1:17488764-17488783 | MS.gene56857:CDS | 40.0% |
| ! | AGTTTGCTTTATTGAGGAGG+TGG | + | chr8.1:17486265-17486284 | MS.gene56857:intron | 40.0% |
| ! | ATGGTTGGCTACCAACATTA+GGG | - | chr8.1:17488164-17488183 | None:intergenic | 40.0% |
| ! | CACGAGTTCCTCTTTTCTTT+GGG | + | chr8.1:17488287-17488306 | MS.gene56857:intron | 40.0% |
| ! | GAAATGGCGTCAAGATTTTG+AGG | + | chr8.1:17486966-17486985 | MS.gene56857:intron | 40.0% |
| ! | TATGGTTGGCTACCAACATT+AGG | - | chr8.1:17488165-17488184 | None:intergenic | 40.0% |
| ! | TCGATTGCATTTGGAGTTGA+AGG | - | chr8.1:17485877-17485896 | None:intergenic | 40.0% |
| !! | AAGGTGAATGAGTTGGTTTG+GGG | - | chr8.1:17488628-17488647 | None:intergenic | 40.0% |
| !! | AATATCGGCTTGTAAGGTGA+GGG | - | chr8.1:17486454-17486473 | None:intergenic | 40.0% |
| !! | AGTTCCTCTTTTCTTTGGGA+TGG | + | chr8.1:17488291-17488310 | MS.gene56857:intron | 40.0% |
| !! | CCAAACAATATCGGCTTGTA+AGG | - | chr8.1:17486460-17486479 | None:intergenic | 40.0% |
| !! | GAACCACAAACTTGGTTCTA+AGG | - | chr8.1:17485841-17485860 | None:intergenic | 40.0% |
| AATTGTGATGGCCTGATAGC+AGG | - | chr8.1:17486546-17486565 | None:intergenic | 45.0% | |
| ACACTCCAGATGTCCATTTC+TGG | + | chr8.1:17486571-17486590 | MS.gene56857:intron | 45.0% | |
| ACCACCTGATCTTAATAGGG+AGG | - | chr8.1:17488225-17488244 | None:intergenic | 45.0% | |
| ACCTCCCTATTAAGATCAGG+TGG | + | chr8.1:17488221-17488240 | MS.gene56857:intron | 45.0% | |
| AGAGCTTCGAACCACAAACT+TGG | - | chr8.1:17485849-17485868 | None:intergenic | 45.0% | |
| AGTACTTGAGACAGTCGCTT+CGG | - | chr8.1:17487761-17487780 | None:intergenic | 45.0% | |
| AGTCTTCCCCTTGGTAGAAA+TGG | + | chr8.1:17486091-17486110 | MS.gene56857:CDS | 45.0% | |
| ATAACTTCTCATCGTCCGCA+GGG | - | chr8.1:17487432-17487451 | None:intergenic | 45.0% | |
| CACAAGGTGAATGGTATGGT+TGG | - | chr8.1:17488179-17488198 | None:intergenic | 45.0% | |
| CACTCCAGATGTCCATTTCT+GGG | + | chr8.1:17486572-17486591 | MS.gene56857:intron | 45.0% | |
| CATCCCTACCATTTCTACCA+AGG | - | chr8.1:17486102-17486121 | None:intergenic | 45.0% | |
| CATTGGGGGTAGAGAGAAAT+AGG | + | chr8.1:17488113-17488132 | MS.gene56857:intron | 45.0% | |
| CCAAAGAAAAGAGGAACTCG+TGG | - | chr8.1:17488289-17488308 | None:intergenic | 45.0% | |
| CTAAGGGATGAAGAAAGACG+AGG | - | chr8.1:17485824-17485843 | None:intergenic | 45.0% | |
| CTTCCCTTTGTACTGAAGTG+TGG | + | chr8.1:17487905-17487924 | MS.gene56857:intron | 45.0% | |
| CTTGCCATCCCAAAGAAAAG+AGG | - | chr8.1:17488298-17488317 | None:intergenic | 45.0% | |
| CTTTATTGAGGAGGTGGAAC+TGG | + | chr8.1:17486271-17486290 | MS.gene56857:intron | 45.0% | |
| GAAAAGAGGAACTCGTGGAT+AGG | - | chr8.1:17488284-17488303 | None:intergenic | 45.0% | |
| GAAATTAGGACTCGAACAGG+TGG | - | chr8.1:17486873-17486892 | None:intergenic | 45.0% | |
| GATCCGTCTCACTGAATCAT+AGG | + | chr8.1:17486804-17486823 | MS.gene56857:intron | 45.0% | |
| GATCTATGACACACACTGGT+AGG | - | chr8.1:17487349-17487368 | None:intergenic | 45.0% | |
| GCATTGAGTAAGCTTCCAAC+TGG | + | chr8.1:17487472-17487491 | MS.gene56857:CDS | 45.0% | |
| GCTATCAGGCCATCACAATT+GGG | + | chr8.1:17486546-17486565 | MS.gene56857:intron | 45.0% | |
| GTGGAAATTAGGACTCGAAC+AGG | - | chr8.1:17486876-17486895 | None:intergenic | 45.0% | |
| TCAAATCGAGACGTCATTGG+GGG | + | chr8.1:17488099-17488118 | MS.gene56857:intron | 45.0% | |
| TCCCCTTGGTAGAAATGGTA+GGG | + | chr8.1:17486096-17486115 | MS.gene56857:CDS | 45.0% | |
| TCCCTACCATTTCTACCAAG+GGG | - | chr8.1:17486100-17486119 | None:intergenic | 45.0% | |
| TGAAGAAAGACGAGGAAGAG+TGG | - | chr8.1:17485816-17485835 | None:intergenic | 45.0% | |
| TGCTATCAGGCCATCACAAT+TGG | + | chr8.1:17486545-17486564 | MS.gene56857:intron | 45.0% | |
| TGTTGGGGTAACCCTAATGT+TGG | + | chr8.1:17488150-17488169 | MS.gene56857:intron | 45.0% | |
| TTCCCCTTGGTAGAAATGGT+AGG | + | chr8.1:17486095-17486114 | MS.gene56857:CDS | 45.0% | |
| ! | AGAAATGGACATCTGGAGTG+TGG | - | chr8.1:17486572-17486591 | None:intergenic | 45.0% |
| ! | ATGTCCATTTCTGGGAGTGA+AGG | + | chr8.1:17486580-17486599 | MS.gene56857:intron | 45.0% |
| ! | CCACGAGTTCCTCTTTTCTT+TGG | + | chr8.1:17488286-17488305 | MS.gene56857:intron | 45.0% |
| ! | GGGCGAGAGTGTACATAATT+TGG | - | chr8.1:17487967-17487986 | None:intergenic | 45.0% |
| ! | TCTAGCTCACCTGATGATTC+TGG | - | chr8.1:17488254-17488273 | None:intergenic | 45.0% |
| ! | TGTCCATTTCTGGGAGTGAA+GGG | + | chr8.1:17486581-17486600 | MS.gene56857:intron | 45.0% |
| ! | TGTTACTAATCAGAGTGCCC+AGG | - | chr8.1:17487321-17487340 | None:intergenic | 45.0% |
| !! | AGGTGAATGAGTTGGTTTGG+GGG | - | chr8.1:17488627-17488646 | None:intergenic | 45.0% |
| !! | CAATATCGGCTTGTAAGGTG+AGG | - | chr8.1:17486455-17486474 | None:intergenic | 45.0% |
| AGAAAGACGAGGAAGAGTGG+TGG | - | chr8.1:17485813-17485832 | None:intergenic | 50.0% | |
| AGGAGGTAACTGCTCACTGT+TGG | + | chr8.1:17488133-17488152 | MS.gene56857:intron | 50.0% | |
| CAAGTTAGGCAATGCCACCA+TGG | - | chr8.1:17487619-17487638 | None:intergenic | 50.0% | |
| CAATGACAGACCTGTGCTTG+TGG | + | chr8.1:17487065-17487084 | MS.gene56857:CDS | 50.0% | |
| CACTCCCAGAAATGGACATC+TGG | - | chr8.1:17486579-17486598 | None:intergenic | 50.0% | |
| CATAACTTCTCATCGTCCGC+AGG | - | chr8.1:17487433-17487452 | None:intergenic | 50.0% | |
| CTCACCTGATGATTCTGGCA+TGG | - | chr8.1:17488249-17488268 | None:intergenic | 50.0% | |
| GAGGTAACTGCTCACTGTTG+GGG | + | chr8.1:17488135-17488154 | MS.gene56857:intron | 50.0% | |
| GCAATCGAATGACTCACGCA+AGG | + | chr8.1:17485889-17485908 | MS.gene56857:CDS | 50.0% | |
| GGAGGTAACTGCTCACTGTT+GGG | + | chr8.1:17488134-17488153 | MS.gene56857:intron | 50.0% | |
| GGTTCCATGCCAGAATCATC+AGG | + | chr8.1:17488242-17488261 | MS.gene56857:intron | 50.0% | |
| TGGGGGTAGAGAGAAATAGG+AGG | + | chr8.1:17488116-17488135 | MS.gene56857:intron | 50.0% | |
| TTCATGACGCTGTCAGCTCT+TGG | - | chr8.1:17487686-17487705 | None:intergenic | 50.0% | |
| ! | GGCTTGGTAAGCTGCCAAAT+TGG | - | chr8.1:17487812-17487831 | None:intergenic | 50.0% |
| ! | GTCCATTTCTGGGAGTGAAG+GGG | + | chr8.1:17486582-17486601 | MS.gene56857:intron | 50.0% |
| CACCCCTTCACTCCCAGAAA+TGG | - | chr8.1:17486587-17486606 | None:intergenic | 55.0% | |
| GGAGTGTGGCCCAATTGTGA+TGG | - | chr8.1:17486558-17486577 | None:intergenic | 55.0% | |
| TGACAGACCTGTGCTTGTGG+TGG | + | chr8.1:17487068-17487087 | MS.gene56857:CDS | 55.0% | |
| TGTGATGGCCTGATAGCAGG+TGG | - | chr8.1:17486543-17486562 | None:intergenic | 55.0% | |
| TTTGCTCTGCAGAGACGGTG+AGG | + | chr8.1:17488769-17488788 | MS.gene56857:CDS | 55.0% | |
| ! | GAGGGTCTGGTTGGTTGAGT+AGG | - | chr8.1:17486898-17486917 | None:intergenic | 55.0% |
| ! | GGTCTGGTTGGTTGAGTAGG+TGG | - | chr8.1:17486895-17486914 | None:intergenic | 55.0% |
| ! | TGAAGGGGTGTGTCGAGAGT+AGG | + | chr8.1:17486597-17486616 | MS.gene56857:intron | 55.0% |
| CCATTGGGCCACCTGCTATC+AGG | + | chr8.1:17486532-17486551 | MS.gene56857:intron | 60.0% | |
| CCTGATAGCAGGTGGCCCAA+TGG | - | chr8.1:17486535-17486554 | None:intergenic | 60.0% | |
| CTCTGCAGAGACGGTGAGGA+AGG | + | chr8.1:17488773-17488792 | MS.gene56857:CDS | 60.0% | |
| GCTGCGACCACCACAAGCAC+AGG | - | chr8.1:17487078-17487097 | None:intergenic | 65.0% | |
| GTCACAGGCACAGGACCCTG+CGG | + | chr8.1:17487414-17487433 | MS.gene56857:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 17485782 | 17488839 | 17485782 | ID=MS.gene56857 |
| chr8.1 | mRNA | 17485782 | 17488839 | 17485782 | ID=MS.gene56857.t1;Parent=MS.gene56857 |
| chr8.1 | exon | 17485782 | 17485910 | 17485782 | ID=MS.gene56857.t1.exon1;Parent=MS.gene56857.t1 |
| chr8.1 | CDS | 17485782 | 17485910 | 17485782 | ID=cds.MS.gene56857.t1;Parent=MS.gene56857.t1 |
| chr8.1 | exon | 17486049 | 17486201 | 17486049 | ID=MS.gene56857.t1.exon2;Parent=MS.gene56857.t1 |
| chr8.1 | CDS | 17486049 | 17486201 | 17486049 | ID=cds.MS.gene56857.t1;Parent=MS.gene56857.t1 |
| chr8.1 | exon | 17486967 | 17487113 | 17486967 | ID=MS.gene56857.t1.exon3;Parent=MS.gene56857.t1 |
| chr8.1 | CDS | 17486967 | 17487113 | 17486967 | ID=cds.MS.gene56857.t1;Parent=MS.gene56857.t1 |
| chr8.1 | exon | 17487421 | 17487573 | 17487421 | ID=MS.gene56857.t1.exon4;Parent=MS.gene56857.t1 |
| chr8.1 | CDS | 17487421 | 17487573 | 17487421 | ID=cds.MS.gene56857.t1;Parent=MS.gene56857.t1 |
| chr8.1 | exon | 17487734 | 17487856 | 17487734 | ID=MS.gene56857.t1.exon5;Parent=MS.gene56857.t1 |
| chr8.1 | CDS | 17487734 | 17487856 | 17487734 | ID=cds.MS.gene56857.t1;Parent=MS.gene56857.t1 |
| chr8.1 | exon | 17488762 | 17488839 | 17488762 | ID=MS.gene56857.t1.exon6;Parent=MS.gene56857.t1 |
| chr8.1 | CDS | 17488762 | 17488839 | 17488762 | ID=cds.MS.gene56857.t1;Parent=MS.gene56857.t1 |
| Gene Sequence |
| Protein sequence |
