Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59005.t1 | XP_013453855.1 | 96.2 | 159 | 6 | 0 | 1 | 159 | 1 | 159 | 7.70E-84 | 319.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59005.t1 | Q39224 | 51.9 | 158 | 72 | 3 | 6 | 159 | 10 | 167 | 2.1e-42 | 173.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59005.t1 | A0A072UER0 | 96.2 | 159 | 6 | 0 | 1 | 159 | 1 | 159 | 5.5e-84 | 319.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene59005 | -0.804861 | 1.76E-49 | -1.69E-46 |
| MS.gene049259 | MS.gene59005 | 0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene59005 | 0.807543 | 4.80E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene59005 | 0.840835 | 6.84E-58 | -1.69E-46 |
| MS.gene049634 | MS.gene59005 | 0.862825 | 3.85E-64 | -1.69E-46 |
| MS.gene049710 | MS.gene59005 | 0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene050095 | MS.gene59005 | 0.823751 | 1.17E-53 | -1.69E-46 |
| MS.gene050096 | MS.gene59005 | 0.822698 | 2.06E-53 | -1.69E-46 |
| MS.gene050216 | MS.gene59005 | -0.826377 | 2.81E-54 | -1.69E-46 |
| MS.gene050380 | MS.gene59005 | 0.835949 | 1.25E-56 | -1.69E-46 |
| MS.gene050381 | MS.gene59005 | 0.872756 | 2.49E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene59005 | -0.805828 | 1.11E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene59005 | -0.812956 | 3.26E-51 | -1.69E-46 |
| MS.gene05079 | MS.gene59005 | 0.821204 | 4.57E-53 | -1.69E-46 |
| MS.gene050809 | MS.gene59005 | 0.819321 | 1.23E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene59005 | -0.827654 | 1.39E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene59005 | -0.827927 | 1.19E-54 | -1.69E-46 |
| MS.gene050883 | MS.gene59005 | 0.814447 | 1.53E-51 | -1.69E-46 |
| MS.gene051044 | MS.gene59005 | 0.8294 | 5.26E-55 | -1.69E-46 |
| MS.gene05104 | MS.gene59005 | 0.836784 | 7.64E-57 | -1.69E-46 |
| MS.gene051127 | MS.gene59005 | 0.867807 | 1.04E-65 | -1.69E-46 |
| MS.gene051138 | MS.gene59005 | 0.844658 | 6.60E-59 | -1.69E-46 |
| MS.gene051632 | MS.gene59005 | 0.830545 | 2.77E-55 | -1.69E-46 |
| MS.gene051863 | MS.gene59005 | 0.810072 | 1.38E-50 | -1.69E-46 |
| MS.gene051874 | MS.gene59005 | -0.801029 | 1.09E-48 | -1.69E-46 |
| MS.gene052211 | MS.gene59005 | 0.812482 | 4.15E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene59005 | 0.836145 | 1.11E-56 | -1.69E-46 |
| MS.gene052805 | MS.gene59005 | 0.820907 | 5.35E-53 | -1.69E-46 |
| MS.gene053031 | MS.gene59005 | 0.821089 | 4.86E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene59005 | 0.82428 | 8.79E-54 | -1.69E-46 |
| MS.gene053069 | MS.gene59005 | 0.811609 | 6.43E-51 | -1.69E-46 |
| MS.gene053406 | MS.gene59005 | 0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene59005 | 0.885584 | 7.17E-72 | -1.69E-46 |
| MS.gene053488 | MS.gene59005 | 0.857885 | 1.20E-62 | -1.69E-46 |
| MS.gene053561 | MS.gene59005 | 0.847297 | 1.26E-59 | -1.69E-46 |
| MS.gene053887 | MS.gene59005 | 0.841287 | 5.21E-58 | -1.69E-46 |
| MS.gene054054 | MS.gene59005 | 0.803153 | 3.99E-49 | -1.69E-46 |
| MS.gene054056 | MS.gene59005 | 0.816091 | 6.61E-52 | -1.69E-46 |
| MS.gene054146 | MS.gene59005 | 0.803912 | 2.78E-49 | -1.69E-46 |
| MS.gene054181 | MS.gene59005 | 0.802381 | 5.76E-49 | -1.69E-46 |
| MS.gene054290 | MS.gene59005 | 0.804058 | 2.59E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene59005 | 0.807616 | 4.63E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene59005 | 0.815999 | 6.93E-52 | -1.69E-46 |
| MS.gene05483 | MS.gene59005 | 0.803789 | 2.95E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene59005 | 0.899269 | 2.34E-77 | -1.69E-46 |
| MS.gene055139 | MS.gene59005 | 0.809966 | 1.46E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene59005 | 0.873942 | 9.94E-68 | -1.69E-46 |
| MS.gene055202 | MS.gene59005 | 0.846614 | 1.94E-59 | -1.69E-46 |
| MS.gene055240 | MS.gene59005 | 0.80344 | 3.48E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene59005 | 0.842862 | 1.99E-58 | -1.69E-46 |
| MS.gene055959 | MS.gene59005 | 0.888697 | 4.69E-73 | -1.69E-46 |
| MS.gene056224 | MS.gene59005 | 0.840053 | 1.10E-57 | -1.69E-46 |
| MS.gene056311 | MS.gene59005 | 0.810518 | 1.11E-50 | -1.69E-46 |
| MS.gene056313 | MS.gene59005 | 0.809297 | 2.03E-50 | -1.69E-46 |
| MS.gene056359 | MS.gene59005 | 0.804129 | 2.50E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene59005 | -0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene59005 | -0.81902 | 1.45E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene59005 | 0.805084 | 1.58E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene59005 | 0.804443 | 2.15E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene59005 | 0.80314 | 4.02E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene59005 | 0.861878 | 7.53E-64 | -1.69E-46 |
| MS.gene056857 | MS.gene59005 | 0.801175 | 1.02E-48 | -1.69E-46 |
| MS.gene057544 | MS.gene59005 | 0.839097 | 1.94E-57 | -1.69E-46 |
| MS.gene057549 | MS.gene59005 | 0.836219 | 1.06E-56 | -1.69E-46 |
| MS.gene057550 | MS.gene59005 | 0.848428 | 6.17E-60 | -1.69E-46 |
| MS.gene057768 | MS.gene59005 | 0.809247 | 2.08E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene59005 | 0.896586 | 3.20E-76 | -1.69E-46 |
| MS.gene058099 | MS.gene59005 | 0.889056 | 3.41E-73 | -1.69E-46 |
| MS.gene058108 | MS.gene59005 | 0.859171 | 4.97E-63 | -1.69E-46 |
| MS.gene058109 | MS.gene59005 | 0.879757 | 9.60E-70 | -1.69E-46 |
| MS.gene058111 | MS.gene59005 | 0.813932 | 1.99E-51 | -1.69E-46 |
| MS.gene058117 | MS.gene59005 | 0.810369 | 1.19E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene59005 | 0.880374 | 5.79E-70 | -1.69E-46 |
| MS.gene058173 | MS.gene59005 | 0.873657 | 1.24E-67 | -1.69E-46 |
| MS.gene058175 | MS.gene59005 | 0.88252 | 9.73E-71 | -1.69E-46 |
| MS.gene058177 | MS.gene59005 | 0.800392 | 1.47E-48 | -1.69E-46 |
| MS.gene058179 | MS.gene59005 | 0.874467 | 6.60E-68 | -1.69E-46 |
| MS.gene058180 | MS.gene59005 | 0.860612 | 1.83E-63 | -1.69E-46 |
| MS.gene058268 | MS.gene59005 | 0.83234 | 9.99E-56 | -1.69E-46 |
| MS.gene058269 | MS.gene59005 | 0.828525 | 8.57E-55 | -1.69E-46 |
| MS.gene058341 | MS.gene59005 | 0.804728 | 1.88E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene59005 | 0.826205 | 3.08E-54 | -1.69E-46 |
| MS.gene058840 | MS.gene59005 | 0.842284 | 2.84E-58 | -1.69E-46 |
| MS.gene059037 | MS.gene59005 | 0.894446 | 2.45E-75 | -1.69E-46 |
| MS.gene059038 | MS.gene59005 | 0.876732 | 1.11E-68 | -1.69E-46 |
| MS.gene059044 | MS.gene59005 | 0.806158 | 9.42E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene59005 | 0.878859 | 2.00E-69 | -1.69E-46 |
| MS.gene05913 | MS.gene59005 | -0.803168 | 3.97E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene59005 | -0.80657 | 7.72E-50 | -1.69E-46 |
| MS.gene059690 | MS.gene59005 | 0.81901 | 1.45E-52 | -1.69E-46 |
| MS.gene059691 | MS.gene59005 | 0.801502 | 8.74E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene59005 | 0.826647 | 2.42E-54 | -1.69E-46 |
| MS.gene059697 | MS.gene59005 | 0.828242 | 1.00E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene59005 | -0.833518 | 5.09E-56 | -1.69E-46 |
| MS.gene059916 | MS.gene59005 | 0.812255 | 4.65E-51 | -1.69E-46 |
| MS.gene059953 | MS.gene59005 | 0.819709 | 1.01E-52 | -1.69E-46 |
| MS.gene059955 | MS.gene59005 | 0.818087 | 2.35E-52 | -1.69E-46 |
| MS.gene060205 | MS.gene59005 | 0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene59005 | -0.81111 | 8.25E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene59005 | 0.802877 | 4.55E-49 | -1.69E-46 |
| MS.gene060778 | MS.gene59005 | -0.803341 | 3.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59005.t1 | MTR_5g048550 | 96.226 | 159 | 6 | 0 | 1 | 159 | 1 | 159 | 1.80e-110 | 318 |
| MS.gene59005.t1 | MTR_0009s0050 | 72.956 | 159 | 43 | 0 | 1 | 159 | 1 | 159 | 5.54e-81 | 243 |
| MS.gene59005.t1 | MTR_0009s0050 | 72.956 | 159 | 43 | 0 | 1 | 159 | 1 | 159 | 6.49e-81 | 243 |
| MS.gene59005.t1 | MTR_5g055900 | 72.327 | 159 | 44 | 0 | 1 | 159 | 1 | 159 | 1.58e-78 | 237 |
| MS.gene59005.t1 | MTR_5g055680 | 73.585 | 159 | 42 | 0 | 1 | 159 | 1 | 159 | 1.97e-78 | 236 |
| MS.gene59005.t1 | MTR_5g048570 | 72.956 | 159 | 41 | 1 | 1 | 159 | 1 | 157 | 4.63e-78 | 236 |
| MS.gene59005.t1 | MTR_5g048850 | 66.038 | 159 | 54 | 0 | 1 | 159 | 1 | 159 | 1.70e-75 | 227 |
| MS.gene59005.t1 | MTR_5g048850 | 66.038 | 159 | 54 | 0 | 1 | 159 | 1 | 159 | 7.52e-75 | 228 |
| MS.gene59005.t1 | MTR_5g055820 | 66.038 | 159 | 54 | 0 | 1 | 159 | 1 | 159 | 2.27e-74 | 226 |
| MS.gene59005.t1 | MTR_0328s0030 | 65.584 | 154 | 53 | 0 | 6 | 159 | 4 | 157 | 1.48e-70 | 216 |
| MS.gene59005.t1 | MTR_5g055690 | 63.750 | 160 | 57 | 1 | 1 | 159 | 1 | 160 | 1.77e-70 | 214 |
| MS.gene59005.t1 | MTR_5g055690 | 63.750 | 160 | 57 | 1 | 1 | 159 | 1 | 160 | 6.75e-70 | 215 |
| MS.gene59005.t1 | MTR_0009s0410 | 63.576 | 151 | 55 | 0 | 9 | 159 | 8 | 158 | 4.67e-69 | 206 |
| MS.gene59005.t1 | MTR_8g064200 | 65.625 | 160 | 54 | 1 | 1 | 159 | 6 | 165 | 5.33e-66 | 205 |
| MS.gene59005.t1 | MTR_8g064200 | 65.625 | 160 | 54 | 1 | 1 | 159 | 11 | 170 | 5.97e-66 | 205 |
| MS.gene59005.t1 | MTR_0009s0480 | 61.589 | 151 | 58 | 0 | 9 | 159 | 8 | 158 | 4.32e-65 | 200 |
| MS.gene59005.t1 | MTR_0009s0480 | 61.589 | 151 | 58 | 0 | 9 | 159 | 8 | 158 | 1.56e-64 | 201 |
| MS.gene59005.t1 | MTR_5g055800 | 61.146 | 157 | 59 | 1 | 5 | 159 | 3 | 159 | 1.83e-64 | 201 |
| MS.gene59005.t1 | MTR_5g048470 | 63.975 | 161 | 56 | 2 | 1 | 159 | 6 | 166 | 5.28e-64 | 200 |
| MS.gene59005.t1 | MTR_5g048740 | 61.039 | 154 | 60 | 0 | 6 | 159 | 4 | 157 | 5.79e-64 | 199 |
| MS.gene59005.t1 | MTR_2g072930 | 56.209 | 153 | 65 | 1 | 5 | 155 | 9 | 161 | 4.48e-58 | 179 |
| MS.gene59005.t1 | MTR_2g072910 | 55.414 | 157 | 68 | 1 | 5 | 159 | 9 | 165 | 9.30e-56 | 176 |
| MS.gene59005.t1 | MTR_2g072910 | 55.414 | 157 | 68 | 1 | 5 | 159 | 9 | 165 | 4.38e-55 | 177 |
| MS.gene59005.t1 | MTR_2g072890 | 53.797 | 158 | 70 | 2 | 5 | 159 | 9 | 166 | 1.98e-53 | 173 |
| MS.gene59005.t1 | MTR_1g033810 | 53.459 | 159 | 66 | 3 | 4 | 159 | 8 | 161 | 1.74e-49 | 162 |
| MS.gene59005.t1 | MTR_7g062580 | 39.375 | 160 | 90 | 2 | 4 | 159 | 11 | 167 | 6.58e-36 | 127 |
| MS.gene59005.t1 | MTR_7g062600 | 40.260 | 154 | 85 | 2 | 4 | 153 | 7 | 157 | 4.53e-35 | 125 |
| MS.gene59005.t1 | MTR_7g045650 | 38.961 | 154 | 87 | 2 | 4 | 153 | 16 | 166 | 4.59e-34 | 122 |
| MS.gene59005.t1 | MTR_7g063730 | 40.690 | 145 | 85 | 1 | 10 | 153 | 26 | 170 | 5.51e-34 | 122 |
| MS.gene59005.t1 | MTR_3g026150 | 40.789 | 152 | 84 | 3 | 6 | 153 | 17 | 166 | 1.83e-33 | 119 |
| MS.gene59005.t1 | MTR_7g062570 | 38.217 | 157 | 96 | 1 | 4 | 159 | 11 | 167 | 3.28e-33 | 120 |
| MS.gene59005.t1 | MTR_7g062550 | 38.312 | 154 | 88 | 2 | 4 | 153 | 16 | 166 | 5.10e-33 | 120 |
| MS.gene59005.t1 | MTR_3g026150 | 40.789 | 152 | 84 | 3 | 6 | 153 | 17 | 166 | 5.17e-33 | 120 |
| MS.gene59005.t1 | MTR_2g437380 | 38.926 | 149 | 84 | 3 | 10 | 153 | 14 | 160 | 7.00e-28 | 106 |
| MS.gene59005.t1 | MTR_7g062560 | 36.111 | 144 | 84 | 2 | 11 | 153 | 25 | 161 | 8.86e-28 | 106 |
| MS.gene59005.t1 | MTR_0009s0050 | 75.410 | 61 | 15 | 0 | 99 | 159 | 1 | 61 | 1.55e-26 | 100 |
| MS.gene59005.t1 | MTR_0009s0050 | 75.410 | 61 | 15 | 0 | 99 | 159 | 1 | 61 | 1.74e-26 | 100 |
| MS.gene59005.t1 | MTR_4g015790 | 32.948 | 173 | 98 | 3 | 1 | 155 | 2 | 174 | 3.38e-26 | 102 |
| MS.gene59005.t1 | MTR_7g068650 | 35.099 | 151 | 89 | 3 | 13 | 154 | 15 | 165 | 3.73e-26 | 102 |
| MS.gene59005.t1 | MTR_3g070860 | 31.757 | 148 | 94 | 3 | 13 | 154 | 15 | 161 | 1.67e-25 | 100 |
| MS.gene59005.t1 | MTR_3g117420 | 39.831 | 118 | 69 | 1 | 38 | 153 | 43 | 160 | 7.76e-24 | 95.5 |
| MS.gene59005.t1 | MTR_5g082750 | 31.757 | 148 | 96 | 2 | 13 | 155 | 14 | 161 | 6.36e-23 | 93.2 |
| MS.gene59005.t1 | MTR_8g074070 | 40.000 | 110 | 64 | 1 | 46 | 153 | 51 | 160 | 1.49e-22 | 91.7 |
| MS.gene59005.t1 | MTR_8g074070 | 40.000 | 110 | 64 | 1 | 46 | 153 | 51 | 160 | 2.04e-22 | 91.7 |
| MS.gene59005.t1 | MTR_5g011250 | 32.237 | 152 | 92 | 3 | 13 | 153 | 8 | 159 | 1.44e-21 | 89.4 |
| MS.gene59005.t1 | MTR_8g074050 | 38.182 | 110 | 66 | 1 | 46 | 153 | 51 | 160 | 7.03e-20 | 84.7 |
| MS.gene59005.t1 | MTR_4g116010 | 36.054 | 147 | 90 | 3 | 8 | 153 | 11 | 154 | 8.15e-20 | 84.7 |
| MS.gene59005.t1 | MTR_3g063180 | 32.653 | 147 | 91 | 5 | 13 | 153 | 10 | 154 | 3.30e-18 | 80.1 |
| MS.gene59005.t1 | MTR_0056s0160 | 77.273 | 44 | 10 | 0 | 116 | 159 | 1 | 44 | 5.55e-16 | 72.8 |
| MS.gene59005.t1 | MTR_3g092890 | 31.008 | 129 | 84 | 3 | 23 | 149 | 14 | 139 | 3.68e-15 | 71.6 |
| MS.gene59005.t1 | MTR_3g072810 | 30.201 | 149 | 93 | 4 | 10 | 153 | 3 | 145 | 1.73e-14 | 69.7 |
| MS.gene59005.t1 | MTR_3g117485 | 31.013 | 158 | 96 | 5 | 12 | 159 | 12 | 166 | 2.46e-14 | 69.3 |
| MS.gene59005.t1 | MTR_8g024120 | 32.061 | 131 | 86 | 3 | 19 | 146 | 13 | 143 | 5.72e-14 | 68.2 |
| MS.gene59005.t1 | MTR_3g072820 | 32.000 | 150 | 94 | 5 | 7 | 153 | 4 | 148 | 5.83e-14 | 68.2 |
| MS.gene59005.t1 | MTR_2g102570 | 29.457 | 129 | 85 | 2 | 19 | 146 | 23 | 146 | 8.97e-14 | 67.8 |
| MS.gene59005.t1 | MTR_8g009110 | 27.632 | 152 | 101 | 4 | 12 | 157 | 27 | 175 | 1.02e-13 | 67.8 |
| MS.gene59005.t1 | MTR_1g102070 | 32.090 | 134 | 84 | 5 | 22 | 151 | 36 | 166 | 2.06e-13 | 67.0 |
| MS.gene59005.t1 | MTR_1g093110 | 30.201 | 149 | 89 | 6 | 20 | 157 | 39 | 183 | 3.34e-13 | 66.2 |
| MS.gene59005.t1 | MTR_5g032870 | 30.952 | 126 | 81 | 3 | 27 | 146 | 18 | 143 | 4.65e-13 | 65.9 |
| MS.gene59005.t1 | MTR_2g069300 | 27.007 | 137 | 95 | 3 | 12 | 143 | 18 | 154 | 5.31e-13 | 65.5 |
| MS.gene59005.t1 | MTR_8g009090 | 30.894 | 123 | 75 | 4 | 42 | 157 | 55 | 174 | 8.29e-13 | 65.1 |
| MS.gene59005.t1 | MTR_5g022020 | 32.203 | 118 | 70 | 3 | 41 | 153 | 36 | 148 | 8.88e-13 | 65.1 |
| MS.gene59005.t1 | MTR_1g062110 | 26.797 | 153 | 101 | 5 | 7 | 150 | 21 | 171 | 1.08e-12 | 64.7 |
| MS.gene59005.t1 | MTR_1g011580 | 30.973 | 113 | 72 | 2 | 47 | 159 | 63 | 169 | 1.18e-12 | 64.7 |
| MS.gene59005.t1 | MTR_1g062110 | 26.797 | 153 | 101 | 5 | 7 | 150 | 21 | 171 | 1.31e-12 | 64.3 |
| MS.gene59005.t1 | MTR_5g065010 | 31.293 | 147 | 86 | 5 | 4 | 143 | 2 | 140 | 1.37e-12 | 64.3 |
| MS.gene59005.t1 | MTR_7g102820 | 29.078 | 141 | 88 | 5 | 14 | 144 | 28 | 166 | 1.43e-12 | 64.3 |
| MS.gene59005.t1 | MTR_3g026150 | 44.068 | 59 | 33 | 0 | 95 | 153 | 5 | 63 | 1.49e-12 | 63.5 |
| MS.gene59005.t1 | MTR_3g088565 | 37.615 | 109 | 64 | 2 | 47 | 154 | 3 | 108 | 1.55e-12 | 63.9 |
| MS.gene59005.t1 | MTR_8g009160 | 30.894 | 123 | 75 | 4 | 42 | 157 | 55 | 174 | 1.56e-12 | 64.3 |
| MS.gene59005.t1 | MTR_4g027020 | 63.415 | 41 | 14 | 1 | 78 | 117 | 14 | 54 | 1.89e-12 | 59.3 |
| MS.gene59005.t1 | MTR_8g008930 | 30.328 | 122 | 78 | 3 | 42 | 157 | 55 | 175 | 3.03e-12 | 63.5 |
| MS.gene59005.t1 | MTR_8g009170 | 28.105 | 153 | 99 | 4 | 12 | 157 | 27 | 175 | 5.53e-12 | 62.8 |
| MS.gene59005.t1 | MTR_8g009170 | 28.105 | 153 | 99 | 4 | 12 | 157 | 27 | 175 | 6.18e-12 | 62.4 |
| MS.gene59005.t1 | MTR_1g093140 | 30.303 | 165 | 102 | 7 | 2 | 157 | 26 | 186 | 6.73e-12 | 62.4 |
| MS.gene59005.t1 | MTR_7g105070 | 30.833 | 120 | 77 | 3 | 12 | 128 | 23 | 139 | 8.12e-12 | 62.4 |
| MS.gene59005.t1 | MTR_8g075830 | 27.027 | 148 | 103 | 2 | 10 | 154 | 4 | 149 | 8.14e-12 | 62.4 |
| MS.gene59005.t1 | MTR_3g058610 | 27.193 | 114 | 83 | 0 | 41 | 154 | 36 | 149 | 9.46e-12 | 62.0 |
| MS.gene59005.t1 | MTR_4g117880 | 29.870 | 154 | 95 | 5 | 12 | 157 | 27 | 175 | 1.18e-11 | 61.6 |
| MS.gene59005.t1 | MTR_7g102720 | 32.727 | 110 | 70 | 3 | 34 | 141 | 24 | 131 | 1.73e-11 | 61.2 |
| MS.gene59005.t1 | MTR_3g043900 | 28.000 | 150 | 101 | 4 | 12 | 157 | 17 | 163 | 1.88e-11 | 61.2 |
| MS.gene59005.t1 | MTR_8g062600 | 27.273 | 165 | 107 | 5 | 4 | 159 | 26 | 186 | 1.93e-11 | 61.2 |
| MS.gene59005.t1 | MTR_8g075890 | 27.660 | 141 | 97 | 2 | 16 | 153 | 10 | 148 | 2.55e-11 | 60.8 |
| MS.gene59005.t1 | MTR_8g028435 | 30.400 | 125 | 79 | 4 | 39 | 157 | 52 | 174 | 2.86e-11 | 60.8 |
| MS.gene59005.t1 | MTR_1g093120 | 35.484 | 93 | 55 | 2 | 23 | 110 | 41 | 133 | 3.00e-11 | 60.5 |
| MS.gene59005.t1 | MTR_4g024660 | 27.950 | 161 | 103 | 5 | 4 | 155 | 26 | 182 | 4.23e-11 | 60.1 |
| MS.gene59005.t1 | MTR_3g088745 | 30.252 | 119 | 76 | 3 | 23 | 137 | 15 | 130 | 5.14e-11 | 60.1 |
| MS.gene59005.t1 | MTR_2g437380 | 39.394 | 66 | 40 | 0 | 88 | 153 | 1 | 66 | 5.48e-11 | 59.3 |
| MS.gene59005.t1 | MTR_8g009150 | 28.571 | 140 | 82 | 5 | 25 | 157 | 47 | 175 | 6.51e-11 | 59.7 |
| MS.gene59005.t1 | MTR_1g034140 | 37.838 | 74 | 44 | 1 | 46 | 119 | 26 | 97 | 8.95e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59005.t1 | AT1G17020 | 51.899 | 158 | 72 | 3 | 6 | 159 | 10 | 167 | 5.00e-52 | 169 |
| MS.gene59005.t1 | AT1G17010 | 50.314 | 159 | 74 | 3 | 6 | 159 | 10 | 168 | 3.33e-49 | 162 |
| MS.gene59005.t1 | AT4G25300 | 46.835 | 158 | 80 | 3 | 6 | 159 | 9 | 166 | 3.90e-47 | 156 |
| MS.gene59005.t1 | AT1G78550 | 43.038 | 158 | 86 | 3 | 6 | 159 | 10 | 167 | 2.43e-43 | 147 |
| MS.gene59005.t1 | AT4G25310 | 44.937 | 158 | 80 | 3 | 6 | 159 | 9 | 163 | 1.97e-40 | 138 |
| MS.gene59005.t1 | AT4G25310 | 44.937 | 158 | 80 | 3 | 6 | 159 | 9 | 163 | 3.92e-40 | 138 |
| MS.gene59005.t1 | AT2G38240 | 37.931 | 145 | 87 | 3 | 12 | 154 | 11 | 154 | 9.86e-31 | 114 |
| MS.gene59005.t1 | AT3G21420 | 41.830 | 153 | 81 | 3 | 10 | 154 | 14 | 166 | 3.39e-30 | 112 |
| MS.gene59005.t1 | AT5G20550 | 35.507 | 138 | 83 | 2 | 24 | 155 | 19 | 156 | 5.30e-24 | 95.9 |
| MS.gene59005.t1 | AT1G78550 | 42.391 | 92 | 49 | 1 | 68 | 159 | 2 | 89 | 2.81e-23 | 92.8 |
| MS.gene59005.t1 | AT3G11180 | 31.081 | 148 | 97 | 1 | 13 | 155 | 56 | 203 | 4.52e-23 | 94.0 |
| MS.gene59005.t1 | AT3G11180 | 31.081 | 148 | 97 | 1 | 13 | 155 | 56 | 203 | 5.03e-23 | 94.0 |
| MS.gene59005.t1 | AT5G05600 | 29.252 | 147 | 99 | 2 | 13 | 154 | 27 | 173 | 1.83e-22 | 90.9 |
| MS.gene59005.t1 | AT5G05600 | 29.252 | 147 | 99 | 2 | 13 | 154 | 27 | 173 | 3.97e-22 | 91.3 |
| MS.gene59005.t1 | AT3G55970 | 30.464 | 151 | 97 | 3 | 13 | 155 | 14 | 164 | 7.06e-22 | 89.7 |
| MS.gene59005.t1 | AT3G55970 | 30.464 | 151 | 97 | 3 | 13 | 155 | 14 | 164 | 1.07e-21 | 89.7 |
| MS.gene59005.t1 | AT4G22880 | 32.692 | 156 | 93 | 3 | 10 | 153 | 4 | 159 | 1.61e-21 | 89.4 |
| MS.gene59005.t1 | AT4G22880 | 32.692 | 156 | 93 | 3 | 10 | 153 | 4 | 159 | 1.61e-21 | 89.4 |
| MS.gene59005.t1 | AT4G22880 | 32.692 | 156 | 93 | 3 | 10 | 153 | 4 | 159 | 1.61e-21 | 89.4 |
| MS.gene59005.t1 | AT5G20400 | 34.783 | 138 | 84 | 3 | 24 | 155 | 19 | 156 | 9.48e-21 | 87.0 |
| MS.gene59005.t1 | AT1G49390 | 31.655 | 139 | 87 | 4 | 24 | 155 | 19 | 156 | 7.59e-20 | 84.7 |
| MS.gene59005.t1 | AT5G54000 | 35.135 | 111 | 69 | 1 | 46 | 153 | 45 | 155 | 4.68e-19 | 82.4 |
| MS.gene59005.t1 | AT1G55290 | 33.824 | 136 | 79 | 5 | 13 | 140 | 26 | 158 | 4.47e-15 | 71.6 |
| MS.gene59005.t1 | AT4G10500 | 30.469 | 128 | 86 | 3 | 22 | 146 | 18 | 145 | 6.70e-14 | 68.2 |
| MS.gene59005.t1 | AT5G43440 | 30.464 | 151 | 94 | 4 | 12 | 153 | 23 | 171 | 9.08e-14 | 67.4 |
| MS.gene59005.t1 | AT3G13610 | 34.307 | 137 | 78 | 6 | 12 | 140 | 26 | 158 | 9.86e-14 | 67.8 |
| MS.gene59005.t1 | AT5G43440 | 30.464 | 151 | 94 | 4 | 12 | 153 | 23 | 171 | 1.02e-13 | 67.8 |
| MS.gene59005.t1 | AT5G24530 | 29.508 | 122 | 83 | 2 | 24 | 144 | 15 | 134 | 1.07e-13 | 67.4 |
| MS.gene59005.t1 | AT1G49390 | 33.766 | 77 | 51 | 0 | 79 | 155 | 1 | 77 | 4.67e-13 | 65.1 |
| MS.gene59005.t1 | AT5G54000 | 36.000 | 75 | 48 | 0 | 79 | 153 | 1 | 75 | 4.82e-13 | 65.1 |
| MS.gene59005.t1 | AT3G19000 | 39.583 | 96 | 47 | 5 | 19 | 108 | 6 | 96 | 1.56e-12 | 63.9 |
| MS.gene59005.t1 | AT3G19000 | 39.583 | 96 | 47 | 5 | 19 | 108 | 6 | 96 | 2.16e-12 | 63.9 |
| MS.gene59005.t1 | AT1G06650 | 30.061 | 163 | 88 | 6 | 12 | 157 | 25 | 178 | 2.30e-12 | 63.9 |
| MS.gene59005.t1 | AT1G06650 | 30.625 | 160 | 85 | 6 | 13 | 155 | 26 | 176 | 2.48e-12 | 63.5 |
| MS.gene59005.t1 | AT2G36690 | 27.703 | 148 | 95 | 4 | 13 | 150 | 21 | 166 | 2.64e-12 | 63.5 |
| MS.gene59005.t1 | AT2G36690 | 27.703 | 148 | 95 | 4 | 13 | 150 | 21 | 166 | 2.64e-12 | 63.5 |
| MS.gene59005.t1 | AT3G19010 | 30.303 | 132 | 79 | 4 | 33 | 158 | 10 | 134 | 3.57e-12 | 63.2 |
| MS.gene59005.t1 | AT3G19010 | 30.303 | 132 | 79 | 4 | 33 | 158 | 10 | 134 | 4.68e-12 | 62.8 |
| MS.gene59005.t1 | AT3G19010 | 30.303 | 132 | 79 | 4 | 33 | 158 | 10 | 134 | 4.68e-12 | 62.8 |
| MS.gene59005.t1 | AT1G06640 | 30.061 | 163 | 88 | 6 | 12 | 157 | 25 | 178 | 5.08e-12 | 62.4 |
| MS.gene59005.t1 | AT3G19010 | 30.303 | 132 | 79 | 4 | 33 | 158 | 10 | 134 | 5.11e-12 | 62.8 |
| MS.gene59005.t1 | AT1G06640 | 33.065 | 124 | 67 | 4 | 44 | 157 | 61 | 178 | 5.14e-12 | 62.8 |
| MS.gene59005.t1 | AT1G06640 | 30.435 | 161 | 86 | 6 | 12 | 155 | 25 | 176 | 7.93e-12 | 62.0 |
| MS.gene59005.t1 | AT4G25420 | 31.304 | 115 | 74 | 3 | 24 | 135 | 40 | 152 | 1.67e-11 | 61.2 |
| MS.gene59005.t1 | AT4G25420 | 31.304 | 115 | 74 | 3 | 24 | 135 | 40 | 152 | 1.78e-11 | 61.2 |
| MS.gene59005.t1 | AT5G07200 | 32.540 | 126 | 77 | 4 | 15 | 135 | 28 | 150 | 2.48e-11 | 60.8 |
| MS.gene59005.t1 | AT1G15550 | 33.663 | 101 | 62 | 2 | 46 | 146 | 56 | 151 | 2.59e-11 | 60.8 |
| MS.gene59005.t1 | AT1G06645 | 41.667 | 72 | 38 | 1 | 44 | 111 | 74 | 145 | 3.55e-11 | 60.5 |
| MS.gene59005.t1 | AT5G08640 | 26.174 | 149 | 103 | 4 | 10 | 153 | 3 | 149 | 4.48e-11 | 60.1 |
| MS.gene59005.t1 | AT5G08640 | 26.174 | 149 | 103 | 4 | 10 | 153 | 3 | 149 | 4.48e-11 | 60.1 |
| MS.gene59005.t1 | AT2G44800 | 32.867 | 143 | 85 | 7 | 12 | 146 | 15 | 154 | 9.90e-11 | 59.3 |
Find 41 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGAGAAGAAGAAATTT+TGG | 0.275911 | 5.3:+37080670 | MS.gene59005:CDS |
| CGAGGATTCCTTTCATCTAA+TGG | 0.295402 | 5.3:-37080789 | None:intergenic |
| CCAAATCCTTCCATGTCATT+TGG | 0.354285 | 5.3:-37080699 | None:intergenic |
| CAAAATAAAATGTCAAGGTT+TGG | 0.372951 | 5.3:+37079663 | None:intergenic |
| GAGTAGGAAACAAACCTAAA+TGG | 0.377754 | 5.3:-37080834 | None:intergenic |
| CCAAATGACATGGAAGGATT+TGG | 0.380420 | 5.3:+37080699 | MS.gene59005:CDS |
| ATCGACCTTGGTAAATTGTT+AGG | 0.381623 | 5.3:+37079819 | MS.gene59005:CDS |
| AGACCTTGCTTGTAAAGAAT+GGG | 0.400804 | 5.3:+37079869 | MS.gene59005:CDS |
| CTAAATGGTTGGAAAATACT+TGG | 0.413891 | 5.3:-37080819 | None:intergenic |
| GTTGATTGAAAAGGTAAAGA+TGG | 0.428723 | 5.3:+37080620 | MS.gene59005:CDS |
| ACATGAGTAGGGTCTTGATT+TGG | 0.433810 | 5.3:-37079762 | None:intergenic |
| AATTTACCAAGGTCGATAAC+TGG | 0.453044 | 5.3:-37079813 | None:intergenic |
| CAACACTTCGTTGATTGAAA+AGG | 0.453373 | 5.3:+37080611 | MS.gene59005:CDS |
| TAGACCTTGCTTGTAAAGAA+TGG | 0.454171 | 5.3:+37079868 | MS.gene59005:CDS |
| TTGCTCTGGAACTTCAATGA+TGG | 0.454680 | 5.3:-37079730 | None:intergenic |
| TTGATTGAAAAGGTAAAGAT+GGG | 0.477556 | 5.3:+37080621 | MS.gene59005:CDS |
| TTTGGACGAAGAAATTGCTC+TGG | 0.479151 | 5.3:-37079744 | None:intergenic |
| TCTTCTTCTCTTCCACTGGT+AGG | 0.479236 | 5.3:-37080662 | None:intergenic |
| AATTTCTTCTTCTCTTCCAC+TGG | 0.489167 | 5.3:-37080666 | None:intergenic |
| CTGATGATCAGAAATTAGAA+TGG | 0.510997 | 5.3:+37080739 | MS.gene59005:CDS |
| TGATGATCAGAAATTAGAAT+GGG | 0.530679 | 5.3:+37080740 | MS.gene59005:CDS |
| CTAATGGAAGTGTGGTAATG+AGG | 0.530737 | 5.3:-37080773 | None:intergenic |
| AACCCCATTCTTTACAAGCA+AGG | 0.534883 | 5.3:-37079872 | None:intergenic |
| AGGAAACAAACCTAAATGGT+TGG | 0.537689 | 5.3:-37080830 | None:intergenic |
| CCACACTTCCATTAGATGAA+AGG | 0.547315 | 5.3:+37080781 | MS.gene59005:CDS |
| TTGTGTTGAGCACATGAGTA+GGG | 0.549234 | 5.3:-37079773 | None:intergenic |
| CTTATGCAGATAATCAATCA+TGG | 0.550366 | 5.3:+37080585 | MS.gene59005:intron |
| TTTGCAAGCTCGTGCACAGA+AGG | 0.571239 | 5.3:-37079702 | None:intergenic |
| AAGGTTTGGAACCTCTCGAT+TGG | 0.588147 | 5.3:+37079677 | MS.gene59005:CDS |
| AGAATTCTTAAGCCTACCAG+TGG | 0.596497 | 5.3:+37080650 | MS.gene59005:CDS |
| GACCTTGCTTGTAAAGAATG+GGG | 0.599209 | 5.3:+37079870 | MS.gene59005:CDS |
| CCTTTCATCTAATGGAAGTG+TGG | 0.601777 | 5.3:-37080781 | None:intergenic |
| CAAGTACCAGTTATCGACCT+TGG | 0.604034 | 5.3:+37079807 | MS.gene59005:CDS |
| TATAACAAAATAAAATGTCA+AGG | 0.607650 | 5.3:+37079658 | None:intergenic |
| AAAATACTTGGAAATAAGCG+AGG | 0.612315 | 5.3:-37080807 | None:intergenic |
| TTGGCAAACTCCAAATGACA+TGG | 0.613342 | 5.3:+37080689 | MS.gene59005:CDS |
| TTTGTGTTGAGCACATGAGT+AGG | 0.618384 | 5.3:-37079774 | None:intergenic |
| CAAACTCCAAATGACATGGA+AGG | 0.624198 | 5.3:+37080693 | MS.gene59005:CDS |
| CACAGAAGGTACCAATCGAG+AGG | 0.663153 | 5.3:-37079688 | None:intergenic |
| CTTCACCTAACAATTTACCA+AGG | 0.680448 | 5.3:-37079824 | None:intergenic |
| AGGTCGATAACTGGTACTTG+TGG | 0.691439 | 5.3:-37079804 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATCTATATGATAATCA+TGG | - | chr5.3:37079981-37080000 | None:intergenic | 15.0% |
| !!! | AAATATACAAGTGTTTTTTA+CGG | - | chr5.3:37080060-37080079 | None:intergenic | 15.0% |
| !! | GATTAATAATAATTCAAACC+TGG | - | chr5.3:37079902-37079921 | None:intergenic | 20.0% |
| !! | TATAGATACAAGTTAATGAA+GGG | + | chr5.3:37080517-37080536 | MS.gene59005:intron | 20.0% |
| !! | TATGTAAGTTGCAAAATAAA+TGG | + | chr5.3:37079953-37079972 | MS.gene59005:intron | 20.0% |
| !!! | TTTAATTTGTAACACATCAT+TGG | + | chr5.3:37080315-37080334 | MS.gene59005:intron | 20.0% |
| ! | CAATAAGTTGTGATATATGT+TGG | + | chr5.3:37080204-37080223 | MS.gene59005:intron | 25.0% |
| ! | CTATAGATACAAGTTAATGA+AGG | + | chr5.3:37080516-37080535 | MS.gene59005:intron | 25.0% |
| ! | TGATGATCAGAAATTAGAAT+GGG | + | chr5.3:37080740-37080759 | MS.gene59005:CDS | 25.0% |
| ! | TTGATTGAAAAGGTAAAGAT+GGG | + | chr5.3:37080621-37080640 | MS.gene59005:CDS | 25.0% |
| !!! | TTTTGAAACAACAATAGTCT+TGG | - | chr5.3:37080436-37080455 | None:intergenic | 25.0% |
| AAAATACTTGGAAATAAGCG+AGG | - | chr5.3:37080810-37080829 | None:intergenic | 30.0% | |
| ATCAAGTTCGTGAAGAAAAA+TGG | - | chr5.3:37080545-37080564 | None:intergenic | 30.0% | |
| CTAAATGGTTGGAAAATACT+TGG | - | chr5.3:37080822-37080841 | None:intergenic | 30.0% | |
| CTGATGATCAGAAATTAGAA+TGG | + | chr5.3:37080739-37080758 | MS.gene59005:CDS | 30.0% | |
| CTTATGCAGATAATCAATCA+TGG | + | chr5.3:37080585-37080604 | MS.gene59005:intron | 30.0% | |
| GTTGATTGAAAAGGTAAAGA+TGG | + | chr5.3:37080620-37080639 | MS.gene59005:CDS | 30.0% | |
| TTATGAATATGCCATTCAAC+AGG | + | chr5.3:37080463-37080482 | MS.gene59005:intron | 30.0% | |
| ! | TGGAAGAGAAGAAGAAATTT+TGG | + | chr5.3:37080670-37080689 | MS.gene59005:CDS | 30.0% |
| AATTTACCAAGGTCGATAAC+TGG | - | chr5.3:37079816-37079835 | None:intergenic | 35.0% | |
| AATTTCTTCTTCTCTTCCAC+TGG | - | chr5.3:37080669-37080688 | None:intergenic | 35.0% | |
| AGACCTTGCTTGTAAAGAAT+GGG | + | chr5.3:37079869-37079888 | MS.gene59005:CDS | 35.0% | |
| ATCGACCTTGGTAAATTGTT+AGG | + | chr5.3:37079819-37079838 | MS.gene59005:CDS | 35.0% | |
| CTTCACCTAACAATTTACCA+AGG | - | chr5.3:37079827-37079846 | None:intergenic | 35.0% | |
| GTATAAACTCGCATGTTGAA+CGG | + | chr5.3:37080156-37080175 | MS.gene59005:intron | 35.0% | |
| TAGACCTTGCTTGTAAAGAA+TGG | + | chr5.3:37079868-37079887 | MS.gene59005:CDS | 35.0% | |
| TCACAACTTATTGTCATTCG+TGG | - | chr5.3:37080197-37080216 | None:intergenic | 35.0% | |
| TGATATTTGTGTATGCTGAG+TGG | - | chr5.3:37080494-37080513 | None:intergenic | 35.0% | |
| ! | CAACACTTCGTTGATTGAAA+AGG | + | chr5.3:37080611-37080630 | MS.gene59005:CDS | 35.0% |
| ! | TAATTGTGTTGACCAATGCA+GGG | - | chr5.3:37080240-37080259 | None:intergenic | 35.0% |
| ! | TTAATTGTGTTGACCAATGC+AGG | - | chr5.3:37080241-37080260 | None:intergenic | 35.0% |
| !!! | TAAAGAATGGGGTTTTTTCC+AGG | + | chr5.3:37079881-37079900 | MS.gene59005:CDS | 35.0% |
| AACCCCATTCTTTACAAGCA+AGG | - | chr5.3:37079875-37079894 | None:intergenic | 40.0% | |
| ACATGAGTAGGGTCTTGATT+TGG | - | chr5.3:37079765-37079784 | None:intergenic | 40.0% | |
| ACATGCGAGTTTATACAGAG+CGG | - | chr5.3:37080152-37080171 | None:intergenic | 40.0% | |
| AGAATTCTTAAGCCTACCAG+TGG | + | chr5.3:37080650-37080669 | MS.gene59005:CDS | 40.0% | |
| CAAACTCCAAATGACATGGA+AGG | + | chr5.3:37080693-37080712 | MS.gene59005:CDS | 40.0% | |
| CCAAATCCTTCCATGTCATT+TGG | - | chr5.3:37080702-37080721 | None:intergenic | 40.0% | |
| CCAAATGACATGGAAGGATT+TGG | + | chr5.3:37080699-37080718 | MS.gene59005:CDS | 40.0% | |
| CCACACTTCCATTAGATGAA+AGG | + | chr5.3:37080781-37080800 | MS.gene59005:CDS | 40.0% | |
| CCTTTCATCTAATGGAAGTG+TGG | - | chr5.3:37080784-37080803 | None:intergenic | 40.0% | |
| CGAGGATTCCTTTCATCTAA+TGG | - | chr5.3:37080792-37080811 | None:intergenic | 40.0% | |
| GACCTTGCTTGTAAAGAATG+GGG | + | chr5.3:37079870-37079889 | MS.gene59005:CDS | 40.0% | |
| TTGGCAAACTCCAAATGACA+TGG | + | chr5.3:37080689-37080708 | MS.gene59005:CDS | 40.0% | |
| TTGTGTTGAGCACATGAGTA+GGG | - | chr5.3:37079776-37079795 | None:intergenic | 40.0% | |
| TTTGGACGAAGAAATTGCTC+TGG | - | chr5.3:37079747-37079766 | None:intergenic | 40.0% | |
| TTTGTGTTGAGCACATGAGT+AGG | - | chr5.3:37079777-37079796 | None:intergenic | 40.0% | |
| ! | CTAATGGAAGTGTGGTAATG+AGG | - | chr5.3:37080776-37080795 | None:intergenic | 40.0% |
| !! | TTATACAGAGCGGGTTAAAC+TGG | - | chr5.3:37080142-37080161 | None:intergenic | 40.0% |
| !! | TTGCTCTGGAACTTCAATGA+TGG | - | chr5.3:37079733-37079752 | None:intergenic | 40.0% |
| AGGTCGATAACTGGTACTTG+TGG | - | chr5.3:37079807-37079826 | None:intergenic | 45.0% | |
| CAAGTACCAGTTATCGACCT+TGG | + | chr5.3:37079807-37079826 | MS.gene59005:CDS | 45.0% | |
| CATGCGAGTTTATACAGAGC+GGG | - | chr5.3:37080151-37080170 | None:intergenic | 45.0% | |
| TCTTCTTCTCTTCCACTGGT+AGG | - | chr5.3:37080665-37080684 | None:intergenic | 45.0% | |
| ! | AAGGTTTGGAACCTCTCGAT+TGG | + | chr5.3:37079677-37079696 | MS.gene59005:CDS | 45.0% |
| !! | GAGTGGACTAACCTGTTGAA+TGG | - | chr5.3:37080477-37080496 | None:intergenic | 45.0% |
| TTTGCAAGCTCGTGCACAGA+AGG | - | chr5.3:37079705-37079724 | None:intergenic | 50.0% | |
| !! | CACAGAAGGTACCAATCGAG+AGG | - | chr5.3:37079691-37079710 | None:intergenic | 50.0% |
| GGTCTGAGTCTGCCCTGCAT+TGG | + | chr5.3:37080225-37080244 | MS.gene59005:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 37079672 | 37080841 | 37079672 | ID=MS.gene59005 |
| chr5.3 | mRNA | 37079672 | 37080841 | 37079672 | ID=MS.gene59005.t1;Parent=MS.gene59005 |
| chr5.3 | exon | 37079672 | 37079902 | 37079672 | ID=MS.gene59005.t1.exon1;Parent=MS.gene59005.t1 |
| chr5.3 | CDS | 37079672 | 37079902 | 37079672 | ID=cds.MS.gene59005.t1;Parent=MS.gene59005.t1 |
| chr5.3 | exon | 37080594 | 37080841 | 37080594 | ID=MS.gene59005.t1.exon2;Parent=MS.gene59005.t1 |
| chr5.3 | CDS | 37080594 | 37080841 | 37080594 | ID=cds.MS.gene59005.t1;Parent=MS.gene59005.t1 |
| Gene Sequence |
| Protein sequence |
