AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70101


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 254 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAGTGACAGAGAGATTT+AGG 0.125238 4.1:-6809481 MS.gene70101:CDS
TTCAGTATTTGTATGGTTTC+AGG 0.145881 4.1:+6811378 None:intergenic
TTCTTTCCCTCTATGGTTTC+GGG 0.165534 4.1:+6812158 None:intergenic
CAGATTCTATTGGGTCTTAT+TGG 0.178181 4.1:-6813313 MS.gene70101:CDS
AGCACGTGTTCTTGAAAATT+TGG 0.179133 4.1:-6812723 MS.gene70101:CDS
CGGATCTGAGCACTTGCTTT+TGG 0.186791 4.1:-6812774 MS.gene70101:CDS
GTCAAAATCACAGGGAAAAT+TGG 0.189560 4.1:-6812333 MS.gene70101:intron
AAAATAATCCTTGTCTTATT+GGG 0.195129 4.1:-6812247 MS.gene70101:CDS
CTCTGCTAGCTTGGTCAAAT+TGG 0.202101 4.1:+6812448 None:intergenic
ACATTACACAAACGCATTAT+TGG 0.214703 4.1:-6810199 MS.gene70101:CDS
ATTACGTACTTTGAATTCTT+TGG 0.223172 4.1:-6813533 MS.gene70101:CDS
CTTCTTTCCCTCTATGGTTT+CGG 0.225647 4.1:+6812157 None:intergenic
CACTGAGAGTTCAATCTCTT+TGG 0.226936 4.1:+6809496 None:intergenic
CTGTTAGCCTCCCATCTTCT+AGG 0.244391 4.1:+6809813 None:intergenic
ACCAACCTTCTTTCCCTCTA+TGG 0.244485 4.1:+6812151 None:intergenic
TCAAGACCTCTTGCCTCTTC+AGG 0.272725 4.1:+6810784 None:intergenic
AGGAATCATGTCGAGGGTTT+TGG 0.273755 4.1:-6813695 MS.gene70101:CDS
GATGAAGTGCACACTCTAAT+TGG 0.276610 4.1:-6811817 MS.gene70101:CDS
ACGAGCCATAATGCGACTTT+TGG 0.309688 4.1:-6809405 MS.gene70101:CDS
GTTGGCTCTGGCACTTTAAC+AGG 0.313503 4.1:+6811405 None:intergenic
AAGCTGGCGATTGGCCTGTT+AGG 0.315733 4.1:+6810112 None:intergenic
AGCTGTCGCATCAATATATT+AGG 0.322138 4.1:-6811284 MS.gene70101:intron
CGCATTATGGCTCGTCTTAG+AGG 0.322921 4.1:+6809413 None:intergenic
TCTTGATATGAGTGAATTCA+TGG 0.325696 4.1:-6809999 MS.gene70101:CDS
TCAGGAGGAGGCAAGGCGGC+TGG 0.337825 4.1:-6813359 MS.gene70101:CDS
TGGAACTGAACAGATTCTAT+TGG 0.339561 4.1:-6813323 MS.gene70101:CDS
GTCCTCCAAAAGTCGCATTA+TGG 0.346892 4.1:+6809400 None:intergenic
GTCGAGGTAGAGAAGATAAT+TGG 0.347679 4.1:-6813226 MS.gene70101:CDS
GCACGTGTTCTTGAAAATTT+GGG 0.360653 4.1:-6812722 MS.gene70101:CDS
TGAAATGTAGCGAACAATTC+AGG 0.365193 4.1:-6813715 None:intergenic
GTAGGTTATAACCCTAGATA+TGG 0.368738 4.1:-6811941 MS.gene70101:intron
CTACAAGTAGACCCATATCT+AGG 0.370031 4.1:+6811929 None:intergenic
TTTCAGGCAACTCACTAAAC+TGG 0.370563 4.1:-6809573 MS.gene70101:CDS
GTGAGGGTGCTGATAGTGTT+GGG 0.370689 4.1:-6812529 MS.gene70101:CDS
CTCAGTGACAGAGAGATTTA+GGG 0.374480 4.1:-6809480 MS.gene70101:CDS
TGAACGTGTCACTCAAATCT+TGG 0.375274 4.1:-6812282 MS.gene70101:CDS
TGGAGGTGAACCAATGAGTT+TGG 0.375955 4.1:+6809961 None:intergenic
CTCTTGGCACGTGGGGTAAA+CGG 0.377703 4.1:+6813172 None:intergenic
AGAGCATCTGGCAATGAATC+TGG 0.383859 4.1:+6809269 None:intergenic
TTTCCAGGTCACAATTATAT+CGG 0.383974 4.1:-6812794 MS.gene70101:intron
GGAACTGAACAGATTCTATT+GGG 0.395625 4.1:-6813322 MS.gene70101:CDS
CCTTGTCTTATTGGGGAACC+TGG 0.397535 4.1:-6812239 MS.gene70101:CDS
TCCCGAGTAACTAGACAGTC+TGG 0.401943 4.1:+6813555 None:intergenic
AAGTCCTTTCAGTATTTGTA+TGG 0.403240 4.1:+6811371 None:intergenic
AAGGTTATAATCCTAGTTAT+GGG 0.408036 4.1:-6809442 MS.gene70101:CDS
CCACAACTCTAGATGAATAT+AGG 0.408234 4.1:-6811470 MS.gene70101:CDS
AAGATAATTGGAAGGGGAAG+TGG 0.413810 4.1:-6813214 MS.gene70101:CDS
AAAATACTTATGCAGTGTAT+AGG 0.417632 4.1:-6811495 MS.gene70101:intron
GAAGGTTATAATCCTAGTTA+TGG 0.419366 4.1:-6809443 MS.gene70101:CDS
GTTGGGGCTACCGTTGGCTC+TGG 0.423794 4.1:-6812512 MS.gene70101:CDS
GGTCTTATTGGTGAAGGAAC+TGG 0.424307 4.1:-6813301 MS.gene70101:CDS
TGGGAGGCTAACAGATAGTA+AGG 0.426292 4.1:-6809804 MS.gene70101:CDS
TTAGGCCAGAGTTCTTGAAT+AGG 0.427859 4.1:-6809613 MS.gene70101:CDS
ATGCCAACTTTGGAGGAGTA+TGG 0.429557 4.1:-6812473 MS.gene70101:CDS
GAGAGTCTTGGAACTCTCAT+TGG 0.431062 4.1:-6813152 MS.gene70101:CDS
TACAACATATTGTTGCCTCT+TGG 0.434175 4.1:-6810285 MS.gene70101:CDS
CATATTGTTGCCTCTTGGAC+TGG 0.442718 4.1:-6810280 MS.gene70101:CDS
GAGGTCTTGAAAAGGAAGTT+AGG 0.443885 4.1:-6810771 MS.gene70101:CDS
AAGCAGTAGAAGCCATTAGC+AGG 0.446141 4.1:-6810168 MS.gene70101:CDS
GCATTGGCCTCATACTACTT+TGG 0.446338 4.1:-6810043 MS.gene70101:CDS
GCCTGGGTGCGAATATTAGT+TGG 0.447285 4.1:+6812692 None:intergenic
CAGGAGGAGGCAAGGCGGCT+GGG 0.447536 4.1:-6813358 MS.gene70101:CDS
TCAACCGAGACTTTGTCAAC+AGG 0.449665 4.1:+6810253 None:intergenic
TGGAATCGCCTCTCCAAAGC+TGG 0.451335 4.1:+6811429 None:intergenic
ATCAAATCTATAGCTTTGTC+AGG 0.451675 4.1:+6810935 None:intergenic
GGTGAGGGTGCTGATAGTGT+TGG 0.456497 4.1:-6812530 MS.gene70101:CDS
AGTTACCTCCTCTGCTAGCT+TGG 0.457680 4.1:+6812439 None:intergenic
TAACAATAAGATGCCAACTT+TGG 0.458624 4.1:-6812483 MS.gene70101:CDS
TTGGACTTAAGAACCCTAAC+AGG 0.460747 4.1:-6810126 MS.gene70101:CDS
GTGCATGTTGAAGTCGGACT+CGG 0.460857 4.1:+6810897 None:intergenic
AACAAGGCAGAGAGTGAGGC+AGG 0.463527 4.1:-6810340 MS.gene70101:CDS
AGCATCATGTTGAAGACATC+AGG 0.464962 4.1:+6809842 None:intergenic
AGCTGGCGATTGGCCTGTTA+GGG 0.465113 4.1:+6810113 None:intergenic
TCGACGGATAGCCCTGCTAA+TGG 0.465463 4.1:+6810156 None:intergenic
AGGAACTGGTATTGCGGCTA+AGG 0.466745 4.1:-6813287 MS.gene70101:CDS
AAACTCATTGGTTCACCTCC+AGG 0.469560 4.1:-6809959 MS.gene70101:CDS
AGGAGCTGAAACAATACTTT+AGG 0.470372 4.1:-6809631 MS.gene70101:CDS
GAGAGTGAGGCAGGAGATGT+AGG 0.476103 4.1:-6810331 MS.gene70101:CDS
GATAGCGGATATAATGTTGA+AGG 0.477705 4.1:-6809540 MS.gene70101:CDS
GTCAACTGACTGAGGCAGTT+CGG 0.478584 4.1:-6809913 MS.gene70101:CDS
TGGCTGAAAAGATGCTTGCT+AGG 0.481331 4.1:-6809373 MS.gene70101:CDS
ATGCTTCAAATCCTAGAAGA+TGG 0.482486 4.1:-6809824 MS.gene70101:CDS
AGAGCTAAGGGATAAAGAAA+TGG 0.482796 4.1:-6810410 MS.gene70101:CDS
AGAGGCCTGGCCCCATAACT+AGG 0.483439 4.1:+6809431 None:intergenic
TGTGGCTGCCTACCCACAAC+AGG 0.484594 4.1:+6812308 None:intergenic
GAACGTGTCACTCAAATCTT+GGG 0.488197 4.1:-6812281 MS.gene70101:CDS
ACCCAGACTGTCTAGTTACT+CGG 0.490173 4.1:-6813557 MS.gene70101:CDS
CACACAGTCTCCAAACTCAT+TGG 0.490778 4.1:-6809971 MS.gene70101:CDS
ACTCATATCAAGACGAATCA+TGG 0.492017 4.1:+6810009 None:intergenic
CAAAGTAATTATGTTGGCTC+AGG 0.492161 4.1:-6813377 MS.gene70101:CDS
ACTCACTAAACTGGAGGTTA+AGG 0.492407 4.1:-6809564 MS.gene70101:CDS
CTTGCTCAACGGATTGCAAA+TGG 0.493862 4.1:-6812188 MS.gene70101:CDS
TATGGCTCGTCTTAGAGGCC+TGG 0.495631 4.1:+6809418 None:intergenic
GTCTGAATTGGCTAAGGCAT+TGG 0.499413 4.1:-6810059 MS.gene70101:CDS
GCACCTTAGAATGAAAATCT+TGG 0.499615 4.1:+6813491 None:intergenic
TGAGTGACACGTTCAATTTG+TGG 0.499806 4.1:+6812290 None:intergenic
ATAGATTTGATTGATGAAGC+TGG 0.500246 4.1:-6810923 MS.gene70101:CDS
TCAAAGAGTACAACCGTGTA+GGG 0.502030 4.1:+6809884 None:intergenic
CCTATATTCATCTAGAGTTG+TGG 0.502316 4.1:+6811470 None:intergenic
GGAAGTTAGGCAGATAGTAA+AGG 0.502653 4.1:-6810758 MS.gene70101:CDS
TCTAAGGTGCTCACTCAGAT+TGG 0.504328 4.1:-6813478 MS.gene70101:CDS
GGGAAAATTGGATCCTGTTG+TGG 0.505719 4.1:-6812321 MS.gene70101:CDS
AGAGGGCGACTCTGTTATAG+TGG 0.506335 4.1:-6809342 MS.gene70101:CDS
TGGTGTGGGGAAGTCTGAAT+TGG 0.506886 4.1:-6810071 MS.gene70101:CDS
GTTTCAGGAACAGTTGGCTC+TGG 0.507634 4.1:+6811393 None:intergenic
GGAAAATTGGATCCTGTTGT+GGG 0.508304 4.1:-6812320 MS.gene70101:CDS
AATGTCCCTGGTCTAGTGGC+TGG 0.508918 4.1:-6813661 MS.gene70101:CDS
ATCTGATCGTCTTCTCAAGA+TGG 0.509066 4.1:-6810227 MS.gene70101:CDS
CAATAAGATGCCAACTTTGG+AGG 0.509184 4.1:-6812480 MS.gene70101:CDS
CTTCGACCAGCCACTAGACC+AGG 0.509991 4.1:+6813655 None:intergenic
GGAAGCAGTGTGATCGAGAA+AGG 0.510531 4.1:-6809731 MS.gene70101:CDS
TGAGAGTTCCAAGACTCTCT+TGG 0.510742 4.1:+6813156 None:intergenic
ATACTTGCAGTTACCTGAAG+AGG 0.512391 4.1:-6810797 MS.gene70101:intron
TCAGTATAACCAACATATCC+TGG 0.513853 4.1:+6809941 None:intergenic
CTGAATAGGCTGGAGAGCTA+AGG 0.514789 4.1:-6810423 MS.gene70101:intron
CTTATAATGACATCAAATGT+TGG 0.515383 4.1:-6809752 MS.gene70101:CDS
AGTAATTATGTTGGCTCAGG+AGG 0.515651 4.1:-6813374 MS.gene70101:CDS
GCTCTGGCACTTTAACAGGT+TGG 0.519765 4.1:+6811409 None:intergenic
TTCAGATCCAAAGTAGTATG+AGG 0.520690 4.1:+6810036 None:intergenic
GGTTCACCTCCAGGATATGT+TGG 0.521392 4.1:-6809950 MS.gene70101:CDS
CTATTGGGTCTTATTGGTGA+AGG 0.521471 4.1:-6813307 MS.gene70101:CDS
GTGCCATACTCCTCCAAAGT+TGG 0.521933 4.1:+6812470 None:intergenic
TTGGAGGAAGCTCGTCAACT+TGG 0.522024 4.1:-6813133 MS.gene70101:intron
AAAGTATTGTTTCAGCTCCT+CGG 0.523545 4.1:+6809634 None:intergenic
CTCTGTAAAACGCTCAAACA+TGG 0.524422 4.1:+6813408 None:intergenic
GAAAAGATGAAGCTGGCGAT+TGG 0.524522 4.1:+6810103 None:intergenic
GATTGGTACTAATCGAGCTA+AGG 0.525728 4.1:-6813461 MS.gene70101:CDS
AATTATGTTGGCTCAGGAGG+AGG 0.526333 4.1:-6813371 MS.gene70101:CDS
TGTATGGTTTCAGGAACAGT+TGG 0.528654 4.1:+6811387 None:intergenic
GCGCAGTCGATTAATGTCCC+TGG 0.531046 4.1:-6813673 MS.gene70101:CDS
ATGGCTGTCTTTCCGACACC+AGG 0.532374 4.1:+6812221 None:intergenic
CTGGTCTAGTGGCTGGTCGA+AGG 0.533789 4.1:-6813654 MS.gene70101:CDS
AAATAATCCTTGTCTTATTG+GGG 0.534007 4.1:-6812246 MS.gene70101:CDS
GAGAAAGGAGGCCGTCGCAT+AGG 0.534709 4.1:-6809716 MS.gene70101:CDS
TCTTGCTAGAGGTGAACTAC+AGG 0.537146 4.1:-6811743 MS.gene70101:intron
TCCAAGACTCTCTTGGCACG+TGG 0.537851 4.1:+6813163 None:intergenic
GGTAGAGAAGATAATTGGAA+GGG 0.540976 4.1:-6813221 MS.gene70101:CDS
ATTGTGCTCAACGGTAGTAC+TGG 0.541363 4.1:-6809296 MS.gene70101:CDS
GTTATTCGCATGGTTGGTGA+GGG 0.544259 4.1:-6812545 MS.gene70101:CDS
ATAATCCTAGTTATGGGGCC+AGG 0.544978 4.1:-6809436 MS.gene70101:CDS
AGGTAGAGAAGATAATTGGA+AGG 0.545059 4.1:-6813222 MS.gene70101:CDS
GTAGAGAAGATAATTGGAAG+GGG 0.545295 4.1:-6813220 MS.gene70101:CDS
ATCTTTCTTCAAATTCTCCA+CGG 0.545588 4.1:+6811893 None:intergenic
CAAGAGCCTCATCAGTATAA+CGG 0.549394 4.1:+6811319 None:intergenic
AGAGGCAAGAGGTCTTGAAA+AGG 0.550450 4.1:-6810779 MS.gene70101:CDS
TGAATAGGCTGGAGAGCTAA+GGG 0.551002 4.1:-6810422 MS.gene70101:intron
GTGCACACTCTAATTGGAGC+AGG 0.551279 4.1:-6811811 MS.gene70101:CDS
TTAGAATGAAAATCTTGGCC+AGG 0.551842 4.1:+6813496 None:intergenic
AATCGAGCTAAGGGTGGTAG+AGG 0.552487 4.1:-6813451 MS.gene70101:CDS
CGAAACCATAGAGGGAAAGA+AGG 0.554723 4.1:-6812156 MS.gene70101:intron
GATAGTGTTGGGGCTACCGT+TGG 0.556248 4.1:-6812518 MS.gene70101:CDS
GGCTGAAAAGATGCTTGCTA+GGG 0.556352 4.1:-6809372 MS.gene70101:CDS
TGCATGTTGAAGTCGGACTC+GGG 0.557579 4.1:+6810898 None:intergenic
AGCTATCAAAGTAATTATGT+TGG 0.558080 4.1:-6813383 MS.gene70101:CDS
GGTTATTCGCATGGTTGGTG+AGG 0.559144 4.1:-6812546 MS.gene70101:CDS
TCGCAACCAAGAGTTTGAAA+AGG 0.559598 4.1:-6810719 MS.gene70101:intron
TGCTTCAAATCCTAGAAGAT+GGG 0.561107 4.1:-6809823 MS.gene70101:CDS
AGTCTTGGAACTCTCATTGG+AGG 0.561170 4.1:-6813149 MS.gene70101:CDS
TCAAGCCTATTCAAGAACTC+TGG 0.561431 4.1:+6809608 None:intergenic
CCCACGTGCCAAGAGAGTCT+TGG 0.563576 4.1:-6813164 MS.gene70101:CDS
TTGCTGAAGGTCTTGCTCAA+CGG 0.563976 4.1:-6812199 MS.gene70101:CDS
GATGAACAAGGCAGAGAGTG+AGG 0.564477 4.1:-6810344 MS.gene70101:CDS
CCCAGACTGTCTAGTTACTC+GGG 0.564773 4.1:-6813556 MS.gene70101:CDS
TACAAGTAGACCCATATCTA+GGG 0.567209 4.1:+6811930 None:intergenic
GATTAATGTCCCTGGTCTAG+TGG 0.568714 4.1:-6813665 MS.gene70101:CDS
TGACCTTGACTATGATGAGA+AGG 0.570760 4.1:-6809690 MS.gene70101:CDS
ATTGGAGCAGGAGCAGCTGA+AGG 0.572423 4.1:-6811799 MS.gene70101:CDS
TTGGAGCAGGAGCAGCTGAA+GGG 0.573404 4.1:-6811798 MS.gene70101:CDS
GGTCTTCTTAGAGAGGGTGA+AGG 0.574148 4.1:-6812752 MS.gene70101:CDS
GAACAGGTTATTCGCATGGT+TGG 0.577586 4.1:-6812551 MS.gene70101:intron
AGCTGAAGGGGCAATTGATG+CGG 0.578062 4.1:-6811785 MS.gene70101:CDS
AGAGAGATTTAGGGAGAGAG+TGG 0.578335 4.1:-6809471 MS.gene70101:CDS
CAGGCAACTCACTAAACTGG+AGG 0.580885 4.1:-6809570 MS.gene70101:CDS
ATGGGAACAGGTTATTCGCA+TGG 0.580936 4.1:-6812555 MS.gene70101:intron
ATTGGTACTAATCGAGCTAA+GGG 0.582672 4.1:-6813460 MS.gene70101:CDS
TTTCTGGCCCTACTGGTGTG+GGG 0.583111 4.1:-6810084 MS.gene70101:CDS
AGTTCACCTCTAGCAAGAGC+TGG 0.583470 4.1:+6811748 None:intergenic
TGGAGCAGGAGCAGCTGAAG+GGG 0.584707 4.1:-6811797 MS.gene70101:CDS
TAGGTTATAACCCTAGATAT+GGG 0.587092 4.1:-6811940 MS.gene70101:CDS
CATCAGTATAACGGAGCTTG+TGG 0.587701 4.1:+6811328 None:intergenic
GCTATCCGTCGAGCTCGTGT+TGG 0.588676 4.1:-6810145 MS.gene70101:CDS
TTGGATTCAATGTTTAGACC+TGG 0.588863 4.1:-6813514 MS.gene70101:CDS
CTTATTGGGGAACCTGGTGT+CGG 0.589543 4.1:-6812233 MS.gene70101:CDS
GATATGGGTCTACTTGTAGC+GGG 0.589741 4.1:-6811925 MS.gene70101:CDS
TTATAACAGAATCAAGAGCT+TGG 0.591045 4.1:-6809660 MS.gene70101:CDS
GCTTGCTAGGGAGATTAAAG+AGG 0.591894 4.1:-6809360 MS.gene70101:CDS
GGATATGTTGGTTATACTGA+GGG 0.591922 4.1:-6809938 MS.gene70101:CDS
AGGGCCAGAAAAGATGAAGC+TGG 0.593390 4.1:+6810096 None:intergenic
TGATGTCCCCGAAACCATAG+AGG 0.595369 4.1:-6812165 MS.gene70101:CDS
TCAGACTTCCCCACACCAGT+AGG 0.597091 4.1:+6810076 None:intergenic
GGAAAGACAGCCATTGCTGA+AGG 0.598239 4.1:-6812212 MS.gene70101:CDS
TCTTAGAGAGGGTGAAGGTG+TGG 0.599604 4.1:-6812747 MS.gene70101:CDS
AGTTCGGCGTCGTCCCTACA+CGG 0.600953 4.1:-6809897 MS.gene70101:CDS
TGAGGGTGCTGATAGTGTTG+GGG 0.601686 4.1:-6812528 MS.gene70101:CDS
GGGGAAGTCTGAATTGGCTA+AGG 0.601878 4.1:-6810065 MS.gene70101:CDS
TAAGTCCAACACGAGCTCGA+CGG 0.602184 4.1:+6810140 None:intergenic
TCTTTCCCTCTATGGTTTCG+GGG 0.604706 4.1:+6812159 None:intergenic
CAATTCAGGAATCATGTCGA+GGG 0.605004 4.1:-6813701 MS.gene70101:CDS
CCCGAGTAACTAGACAGTCT+GGG 0.606554 4.1:+6813556 None:intergenic
TATCCCTGTTGACAAAGTCT+CGG 0.606924 4.1:-6810257 MS.gene70101:CDS
TGTTGGCTCAGGAGGAGGCA+AGG 0.607258 4.1:-6813366 MS.gene70101:CDS
TTTGACCAAGCTAGCAGAGG+AGG 0.607369 4.1:-6812444 MS.gene70101:intron
CAGACTTCCCCACACCAGTA+GGG 0.610250 4.1:+6810077 None:intergenic
AGCGGATATAATGTTGAAGG+AGG 0.610347 4.1:-6809537 MS.gene70101:CDS
CATGTTGAAGACATCAGGAT+GGG 0.610516 4.1:+6809847 None:intergenic
GAAACCATACAAATACTGAA+AGG 0.611115 4.1:-6811375 MS.gene70101:CDS
CCTAAAAGATGCACGTGTCG+AGG 0.614327 4.1:-6813242 MS.gene70101:CDS
AGTCCGACTTCAACATGCAC+AGG 0.614688 4.1:-6810894 MS.gene70101:intron
TGGTGAAGGAACTGGTATTG+CGG 0.615599 4.1:-6813293 MS.gene70101:CDS
CAGTTACCTGAAGAGGCAAG+AGG 0.619646 4.1:-6810790 MS.gene70101:CDS
GTTACTACTTCCAGAGCCAA+CGG 0.622846 4.1:+6812502 None:intergenic
CCAAGACTCTCTTGGCACGT+GGG 0.623311 4.1:+6813164 None:intergenic
TTGAAGCCAGCTCTTGCTAG+AGG 0.624182 4.1:-6811754 MS.gene70101:CDS
CAAGACTCTCTTGGCACGTG+GGG 0.624750 4.1:+6813165 None:intergenic
AATTGGATCCTGTTGTGGGT+AGG 0.625477 4.1:-6812316 MS.gene70101:CDS
TTGAGCAAGACCTTCAGCAA+TGG 0.626338 4.1:+6812202 None:intergenic
TCATGTTGAAGACATCAGGA+TGG 0.628699 4.1:+6809846 None:intergenic
AAGGAGCAGCTAGATCAAGA+AGG 0.632838 4.1:-6813615 MS.gene70101:CDS
TGTCCTTCTCATCATAGTCA+AGG 0.633612 4.1:+6809687 None:intergenic
CAAGCTCCGTTATACTGATG+AGG 0.634549 4.1:-6811325 MS.gene70101:CDS
ATCAAAGAGTACAACCGTGT+AGG 0.635792 4.1:+6809883 None:intergenic
AATCAAGAGCTTGGTGACCG+AGG 0.635925 4.1:-6809651 MS.gene70101:CDS
AGGGAGAGAGTGGTCGACGA+AGG 0.636473 4.1:-6809461 MS.gene70101:CDS
AGGATATGTTGGTTATACTG+AGG 0.636582 4.1:-6809939 MS.gene70101:CDS
AGATATGGGTCTACTTGTAG+CGG 0.638102 4.1:-6811926 MS.gene70101:CDS
CAAGGTCAAATCCTATGCGA+CGG 0.639546 4.1:+6809705 None:intergenic
CAACCGAGACTTTGTCAACA+GGG 0.642126 4.1:+6810254 None:intergenic
ACTGGAGGTTAAGGAGATAG+CGG 0.642477 4.1:-6809555 MS.gene70101:CDS
ACAATTCAGGAATCATGTCG+AGG 0.643511 4.1:-6813702 MS.gene70101:CDS
CTTGCTAGGGAGATTAAAGA+GGG 0.645642 4.1:-6809359 MS.gene70101:CDS
TTCGACCAGCCACTAGACCA+GGG 0.645722 4.1:+6813656 None:intergenic
ATACCTGTGCATGTTGAAGT+CGG 0.645864 4.1:+6810891 None:intergenic
AGCAGTAGAAGCCATTAGCA+GGG 0.646108 4.1:-6810167 MS.gene70101:CDS
TCTGGGTGCAGCAGTTCGTG+TGG 0.646472 4.1:+6813573 None:intergenic
AGGTTATAATCCTAGTTATG+GGG 0.648482 4.1:-6809441 MS.gene70101:CDS
GATGTCCCCGAAACCATAGA+GGG 0.650692 4.1:-6812164 MS.gene70101:CDS
TATGTTGGTTATACTGAGGG+TGG 0.650997 4.1:-6809935 MS.gene70101:CDS
CCAGGTTCCCCAATAAGACA+AGG 0.651573 4.1:+6812239 None:intergenic
ATATGAGTGAATTCATGGAA+AGG 0.652142 4.1:-6809994 MS.gene70101:CDS
GGGAGGCTAACAGATAGTAA+GGG 0.655267 4.1:-6809803 MS.gene70101:CDS
AACAGGGATACCAGTCCAAG+AGG 0.658998 4.1:+6810270 None:intergenic
ATAGTGGATGCTGATTCTGA+TGG 0.662089 4.1:-6809326 MS.gene70101:CDS
AGGCATGTCAATAACAACAA+AGG 0.662987 4.1:-6813634 MS.gene70101:CDS
TTCAAATCCTAGAAGATGGG+AGG 0.665767 4.1:-6809820 MS.gene70101:CDS
TCCAACTAATATTCGCACCC+AGG 0.666203 4.1:-6812693 MS.gene70101:intron
CAATTTGACCAAGCTAGCAG+AGG 0.667069 4.1:-6812447 MS.gene70101:CDS
AGATAGTAAGGGAAGAACTG+TGG 0.671130 4.1:-6809792 MS.gene70101:CDS
TGAGGGTGGTCAACTGACTG+AGG 0.676897 4.1:-6809921 MS.gene70101:CDS
AGCAGTGTGATCGAGAAAGG+AGG 0.677611 4.1:-6809728 MS.gene70101:CDS
GGTACTAATCGAGCTAAGGG+TGG 0.687277 4.1:-6813457 MS.gene70101:CDS
GGAAACGTGATTGTGCTCAA+CGG 0.722695 4.1:-6809305 MS.gene70101:CDS
GTATAACCAACATATCCTGG+AGG 0.727417 4.1:+6809944 None:intergenic
TGGCTCAGGAGGAGGCAAGG+CGG 0.734449 4.1:-6813363 MS.gene70101:CDS
GTAGCGGGAACTAAATACCG+TGG 0.739992 4.1:-6811910 MS.gene70101:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATCAAAAACAATTTA+TGG + chr4.1:6810858-6810877 None:intergenic 10.0%
!! TAAAATCAAAAACAATTTAT+GGG + chr4.1:6810857-6810876 None:intergenic 10.0%
!! TCATAAATTAAAATTGAAAA+CGG + chr4.1:6811740-6811759 None:intergenic 10.0%
!! ATTTGGATATATATAATTGA+AGG + chr4.1:6812473-6812492 None:intergenic 15.0%
!! CATAAATTAAAATTGAAAAC+GGG + chr4.1:6811739-6811758 None:intergenic 15.0%
!!! AATTGTTTTTGATTTTATTC+AGG - chr4.1:6810860-6810879 MS.gene70101:intron 15.0%
!!! ATTGTTTTACAACATTATTT+TGG - chr4.1:6811859-6811878 MS.gene70101:CDS 15.0%
!!! ATTGTTTTTGATTTTATTCA+GGG - chr4.1:6810861-6810880 MS.gene70101:intron 15.0%
!!! GTTCTTTTGTTTATTTTATT+TGG - chr4.1:6810075-6810094 MS.gene70101:CDS 15.0%
!!! TAAATTCTTAATGATCATTT+TGG - chr4.1:6811411-6811430 MS.gene70101:CDS 15.0%
!!! TTCAATTTTAATTTATGATG+TGG - chr4.1:6811742-6811761 MS.gene70101:intron 15.0%
!! AAAAATAATCCTTGTCTTAT+TGG - chr4.1:6810716-6810735 MS.gene70101:intron 20.0%
!! AAAATATAATGTAATCTCAC+TGG + chr4.1:6812347-6812366 None:intergenic 20.0%
!! AAATAAACAAAAGAACAGAA+AGG + chr4.1:6810071-6810090 None:intergenic 20.0%
!! AATGTTGTAAAACAATTCAA+AGG + chr4.1:6811855-6811874 None:intergenic 20.0%
!! AGAAAGATTGAAAAAACTAA+TGG - chr4.1:6811086-6811105 MS.gene70101:intron 20.0%
!!! AAAATAATCCTTGTCTTATT+GGG - chr4.1:6810717-6810736 MS.gene70101:intron 20.0%
!!! AATAAGACAAGGATTATTTT+TGG + chr4.1:6810717-6810736 None:intergenic 20.0%
!!! AGAGAATTTTTTTATAGTTC+TGG - chr4.1:6811768-6811787 MS.gene70101:CDS 20.0%
!!! TTGTTTTTGATTTTATTCAG+GGG - chr4.1:6810862-6810881 MS.gene70101:intron 20.0%
! AAAATACTTATGCAGTGTAT+AGG - chr4.1:6811469-6811488 MS.gene70101:CDS 25.0%
! AAATTCCAGATGATTAACTT+CGG + chr4.1:6811823-6811842 None:intergenic 25.0%
! AAGATTGAAAAAACTAATGG+AGG - chr4.1:6811089-6811108 MS.gene70101:intron 25.0%
! AAGGTTATAATCCTAGTTAT+GGG - chr4.1:6813522-6813541 MS.gene70101:CDS 25.0%
! AGCACTTATAGAAAAAAACA+AGG - chr4.1:6812596-6812615 MS.gene70101:intron 25.0%
! AGCTATCAAAGTAATTATGT+TGG - chr4.1:6809581-6809600 MS.gene70101:CDS 25.0%
! ATTACGTACTTTGAATTCTT+TGG - chr4.1:6809431-6809450 MS.gene70101:CDS 25.0%
! ATTTATTACCCAGAATGTAA+AGG + chr4.1:6812497-6812516 None:intergenic 25.0%
! CTGATTATAATTCTTAGATG+TGG - chr4.1:6810946-6810965 MS.gene70101:CDS 25.0%
! CTGGTATTACATGTTTAAAT+GGG - chr4.1:6811787-6811806 MS.gene70101:CDS 25.0%
! CTTATAATGACATCAAATGT+TGG - chr4.1:6813212-6813231 MS.gene70101:CDS 25.0%
! GTTGAAATTTATCCATGAAT+TGG - chr4.1:6810024-6810043 MS.gene70101:CDS 25.0%
! TCTGGTATTACATGTTTAAA+TGG - chr4.1:6811786-6811805 MS.gene70101:CDS 25.0%
! TGATACCTTAATTTCTGAAT+AGG - chr4.1:6812527-6812546 MS.gene70101:CDS 25.0%
!! AAATAATCCTTGTCTTATTG+GGG - chr4.1:6810718-6810737 MS.gene70101:intron 25.0%
!! TTGATGAAATGATTGTTTTC+AGG - chr4.1:6813375-6813394 MS.gene70101:CDS 25.0%
!!! ATGTGGAATTTTAGTACTTT+CGG - chr4.1:6810963-6810982 MS.gene70101:intron 25.0%
!!! TGTTTTTGATTTTATTCAGG+GGG - chr4.1:6810863-6810882 MS.gene70101:intron 25.0%
AAAAAACAAGGAGATGAACA+AGG - chr4.1:6812608-6812627 MS.gene70101:intron 30.0%
AAGTCCTTTCAGTATTTGTA+TGG + chr4.1:6811596-6811615 None:intergenic 30.0%
ACATCACGAAAGAGAAAAAT+TGG + chr4.1:6810613-6810632 None:intergenic 30.0%
ACATTACACAAACGCATTAT+TGG - chr4.1:6812765-6812784 MS.gene70101:CDS 30.0%
ACATTCTGGGTAATAAATAG+TGG - chr4.1:6812499-6812518 MS.gene70101:CDS 30.0%
AGCAAAAATCAAGTCATGTT+TGG + chr4.1:6809955-6809974 None:intergenic 30.0%
AGGTTATAATCCTAGTTATG+GGG - chr4.1:6813523-6813542 MS.gene70101:CDS 30.0%
ATAGATTTGATTGATGAAGC+TGG - chr4.1:6812041-6812060 MS.gene70101:intron 30.0%
ATATGAGTGAATTCATGGAA+AGG - chr4.1:6812970-6812989 MS.gene70101:intron 30.0%
ATCCAAATTCCTTTACATTC+TGG - chr4.1:6812485-6812504 MS.gene70101:CDS 30.0%
ATCTTTCTTCAAATTCTCCA+CGG + chr4.1:6811074-6811093 None:intergenic 30.0%
ATGTAATCTCACTGGAAAAA+AGG + chr4.1:6812339-6812358 None:intergenic 30.0%
CATTCTGGGTAATAAATAGT+GGG - chr4.1:6812500-6812519 MS.gene70101:CDS 30.0%
CTATGAAATGTAAAGACTGA+AGG - chr4.1:6811439-6811458 MS.gene70101:CDS 30.0%
GAAACCATACAAATACTGAA+AGG - chr4.1:6811589-6811608 MS.gene70101:intron 30.0%
GAAGATAACAAGATAGAAGA+AGG + chr4.1:6811939-6811958 None:intergenic 30.0%
GAAGGTTATAATCCTAGTTA+TGG - chr4.1:6813521-6813540 MS.gene70101:CDS 30.0%
GTTGAGTATCCTAAAAATGT+GGG + chr4.1:6812314-6812333 None:intergenic 30.0%
TAACAATAAGATGCCAACTT+TGG - chr4.1:6810481-6810500 MS.gene70101:intron 30.0%
TAGGTTATAACCCTAGATAT+GGG - chr4.1:6811024-6811043 MS.gene70101:intron 30.0%
TCCAAATTCCTTTACATTCT+GGG - chr4.1:6812486-6812505 MS.gene70101:CDS 30.0%
TCTTGATATGAGTGAATTCA+TGG - chr4.1:6812965-6812984 MS.gene70101:intron 30.0%
TCTTTCCTAAAGTTCTATAG+CGG - chr4.1:6812403-6812422 MS.gene70101:intron 30.0%
TTAAACCGAAGTTAATCATC+TGG - chr4.1:6811815-6811834 MS.gene70101:CDS 30.0%
TTATAACAGAATCAAGAGCT+TGG - chr4.1:6813304-6813323 MS.gene70101:CDS 30.0%
TTCAGTATTTGTATGGTTTC+AGG + chr4.1:6811589-6811608 None:intergenic 30.0%
TTGAGTATCCTAAAAATGTG+GGG + chr4.1:6812313-6812332 None:intergenic 30.0%
TTTCCAGGTCACAATTATAT+CGG - chr4.1:6810170-6810189 MS.gene70101:CDS 30.0%
TTTGTTTGAAGACATTGTAG+TGG - chr4.1:6812441-6812460 MS.gene70101:intron 30.0%
! CTACAGGTAATGTTTTCTTT+TGG - chr4.1:6811237-6811256 MS.gene70101:intron 30.0%
! TAACATAACCCCACATTTTT+AGG - chr4.1:6812302-6812321 MS.gene70101:CDS 30.0%
! TTCTTTTGGCATCTCAAAAA+TGG - chr4.1:6811251-6811270 MS.gene70101:intron 30.0%
!! ATCAAATCTATAGCTTTGTC+AGG + chr4.1:6812032-6812051 None:intergenic 30.0%
!! TGTGGAATTTTAGTACTTTC+GGG - chr4.1:6810964-6810983 MS.gene70101:intron 30.0%
AAACAAAAGAACAGAAAGGC+CGG + chr4.1:6810067-6810086 None:intergenic 35.0%
AAAGATAAAACAGCCTTACG+TGG + chr4.1:6812388-6812407 None:intergenic 35.0%
AATCTTGTACTCCACTTGAT+GGG - chr4.1:6810391-6810410 MS.gene70101:CDS 35.0%
ACATAAATCACGCCAATTCA+TGG + chr4.1:6810039-6810058 None:intergenic 35.0%
ACCCAGAATGTAAAGGAATT+TGG + chr4.1:6812490-6812509 None:intergenic 35.0%
ACCTTAATTTCTGAATAGGC+TGG - chr4.1:6812531-6812550 MS.gene70101:CDS 35.0%
ACTCATATCAAGACGAATCA+TGG + chr4.1:6812958-6812977 None:intergenic 35.0%
AGAGCTAAGGGATAAAGAAA+TGG - chr4.1:6812554-6812573 MS.gene70101:intron 35.0%
AGCACGTGTTCTTGAAAATT+TGG - chr4.1:6810241-6810260 MS.gene70101:CDS 35.0%
AGCTGTCGCATCAATATATT+AGG - chr4.1:6811680-6811699 MS.gene70101:intron 35.0%
AGGAGCTGAAACAATACTTT+AGG - chr4.1:6813333-6813352 MS.gene70101:CDS 35.0%
AGGCATGTCAATAACAACAA+AGG - chr4.1:6809330-6809349 MS.gene70101:CDS 35.0%
AGGTAGAGAAGATAATTGGA+AGG - chr4.1:6809742-6809761 MS.gene70101:CDS 35.0%
ATGATGACATAATACTTGCC+TGG + chr4.1:6810292-6810311 None:intergenic 35.0%
ATGCTTCAAATCCTAGAAGA+TGG - chr4.1:6813140-6813159 MS.gene70101:CDS 35.0%
ATTGGTACTAATCGAGCTAA+GGG - chr4.1:6809504-6809523 MS.gene70101:CDS 35.0%
CATCTGTCATGAAGAAAACT+AGG + chr4.1:6810558-6810577 None:intergenic 35.0%
CATTGAAAAAGATCCAGCTT+TGG - chr4.1:6811522-6811541 MS.gene70101:intron 35.0%
CCACAACTCTAGATGAATAT+AGG - chr4.1:6811494-6811513 MS.gene70101:intron 35.0%
CCTGGAAATTGCAAAATGTA+AGG + chr4.1:6810158-6810177 None:intergenic 35.0%
GAGCAAGTTAAACATGTTCA+AGG + chr4.1:6810917-6810936 None:intergenic 35.0%
GCACCTTAGAATGAAAATCT+TGG + chr4.1:6809476-6809495 None:intergenic 35.0%
GCACGTGTTCTTGAAAATTT+GGG - chr4.1:6810242-6810261 MS.gene70101:CDS 35.0%
GGAACTGAACAGATTCTATT+GGG - chr4.1:6809642-6809661 MS.gene70101:CDS 35.0%
GGTAGAGAAGATAATTGGAA+GGG - chr4.1:6809743-6809762 MS.gene70101:CDS 35.0%
GGTTGAGTATCCTAAAAATG+TGG + chr4.1:6812315-6812334 None:intergenic 35.0%
GTAGAGAAGATAATTGGAAG+GGG - chr4.1:6809744-6809763 MS.gene70101:CDS 35.0%
GTAGGTTATAACCCTAGATA+TGG - chr4.1:6811023-6811042 MS.gene70101:intron 35.0%
GTCAAAATCACAGGGAAAAT+TGG - chr4.1:6810631-6810650 MS.gene70101:intron 35.0%
TAATCTCACTGGAAAAAAGG+TGG + chr4.1:6812336-6812355 None:intergenic 35.0%
TAATCTTGTACTCCACTTGA+TGG - chr4.1:6810390-6810409 MS.gene70101:CDS 35.0%
TACAACATATTGTTGCCTCT+TGG - chr4.1:6812679-6812698 MS.gene70101:intron 35.0%
TACAAGTAGACCCATATCTA+GGG + chr4.1:6811037-6811056 None:intergenic 35.0%
TCAGTATAACCAACATATCC+TGG + chr4.1:6813026-6813045 None:intergenic 35.0%
TCCAGCCTATTCAGAAATTA+AGG + chr4.1:6812535-6812554 None:intergenic 35.0%
TGATGACATAATACTTGCCT+GGG + chr4.1:6810291-6810310 None:intergenic 35.0%
TGCTTCAAATCCTAGAAGAT+GGG - chr4.1:6813141-6813160 MS.gene70101:CDS 35.0%
TGGAACTGAACAGATTCTAT+TGG - chr4.1:6809641-6809660 MS.gene70101:CDS 35.0%
TTAGAATGAAAATCTTGGCC+AGG + chr4.1:6809471-6809490 None:intergenic 35.0%
TTCAGATCCAAAGTAGTATG+AGG + chr4.1:6812931-6812950 None:intergenic 35.0%
TTCGTGATGTCAAAATCACA+GGG - chr4.1:6810623-6810642 MS.gene70101:intron 35.0%
TTGGATTCAATGTTTAGACC+TGG - chr4.1:6809450-6809469 MS.gene70101:CDS 35.0%
TTTCGTGATGTCAAAATCAC+AGG - chr4.1:6810622-6810641 MS.gene70101:intron 35.0%
! AGGATATGTTGGTTATACTG+AGG - chr4.1:6813025-6813044 MS.gene70101:intron 35.0%
! CAGATTCTATTGGGTCTTAT+TGG - chr4.1:6809651-6809670 MS.gene70101:CDS 35.0%
! CCTATATTCATCTAGAGTTG+TGG + chr4.1:6811497-6811516 None:intergenic 35.0%
! CCTTACATTTTGCAATTTCC+AGG - chr4.1:6810155-6810174 MS.gene70101:CDS 35.0%
! GCATTACCTTTTCAAACTCT+TGG + chr4.1:6812254-6812273 None:intergenic 35.0%
! GGATATGTTGGTTATACTGA+GGG - chr4.1:6813026-6813045 MS.gene70101:intron 35.0%
! TGATTTTATTCAGGGGGTAA+GGG - chr4.1:6810869-6810888 MS.gene70101:intron 35.0%
! TGGCCAAGATTTTCATTCTA+AGG - chr4.1:6809470-6809489 MS.gene70101:CDS 35.0%
! TTGATTTTATTCAGGGGGTA+AGG - chr4.1:6810868-6810887 MS.gene70101:intron 35.0%
!! AAAGTATTGTTTCAGCTCCT+CGG + chr4.1:6813333-6813352 None:intergenic 35.0%
!! CAAAGTAATTATGTTGGCTC+AGG - chr4.1:6809587-6809606 MS.gene70101:CDS 35.0%
!! CTAGTTTTCTTCATGACAGA+TGG - chr4.1:6810556-6810575 MS.gene70101:intron 35.0%
!! GATAGCGGATATAATGTTGA+AGG - chr4.1:6813424-6813443 MS.gene70101:CDS 35.0%
!! TTTTGCTTTGAGTGATCTGT+CGG - chr4.1:6809968-6809987 MS.gene70101:CDS 35.0%
!!! ATCTTTTAGGTTAATCCCCA+TGG + chr4.1:6809712-6809731 None:intergenic 35.0%
AACCTACATCATGCAGAACA+AGG + chr4.1:6811010-6811029 None:intergenic 40.0%
AAGATAATTGGAAGGGGAAG+TGG - chr4.1:6809750-6809769 MS.gene70101:CDS 40.0%
AATAACCTGTTCCCATCAAG+TGG + chr4.1:6810405-6810424 None:intergenic 40.0%
ACAATTCAGGAATCATGTCG+AGG - chr4.1:6809262-6809281 MS.gene70101:CDS 40.0%
ACTCACTAAACTGGAGGTTA+AGG - chr4.1:6813400-6813419 MS.gene70101:CDS 40.0%
AGATAGTAAGGGAAGAACTG+TGG - chr4.1:6813172-6813191 MS.gene70101:CDS 40.0%
AGATATGGGTCTACTTGTAG+CGG - chr4.1:6811038-6811057 MS.gene70101:intron 40.0%
AGCATCATGTTGAAGACATC+AGG + chr4.1:6813125-6813144 None:intergenic 40.0%
AGCGGATATAATGTTGAAGG+AGG - chr4.1:6813427-6813446 MS.gene70101:CDS 40.0%
ATACCTGTGCATGTTGAAGT+CGG + chr4.1:6812076-6812095 None:intergenic 40.0%
ATACTTGCAGTTACCTGAAG+AGG - chr4.1:6812167-6812186 MS.gene70101:CDS 40.0%
ATAGACGAGAAAAGAACTGC+TGG + chr4.1:6812121-6812140 None:intergenic 40.0%
ATCTGATCGTCTTCTCAAGA+TGG - chr4.1:6812737-6812756 MS.gene70101:CDS 40.0%
CAAAGCCGCTATAGAACTTT+AGG + chr4.1:6812411-6812430 None:intergenic 40.0%
CAAGAGCCTCATCAGTATAA+CGG + chr4.1:6811648-6811667 None:intergenic 40.0%
CAATAAGATGCCAACTTTGG+AGG - chr4.1:6810484-6810503 MS.gene70101:intron 40.0%
CAATTCAGGAATCATGTCGA+GGG - chr4.1:6809263-6809282 MS.gene70101:CDS 40.0%
CACTGAGAGTTCAATCTCTT+TGG + chr4.1:6813471-6813490 None:intergenic 40.0%
CATGTTGAAGACATCAGGAT+GGG + chr4.1:6813120-6813139 None:intergenic 40.0%
CTACAAGTAGACCCATATCT+AGG + chr4.1:6811038-6811057 None:intergenic 40.0%
CTCAGTGACAGAGAGATTTA+GGG - chr4.1:6813484-6813503 MS.gene70101:CDS 40.0%
CTCTGTAAAACGCTCAAACA+TGG + chr4.1:6809559-6809578 None:intergenic 40.0%
CTTCTTTCCCTCTATGGTTT+CGG + chr4.1:6810810-6810829 None:intergenic 40.0%
CTTGCTAGGGAGATTAAAGA+GGG - chr4.1:6813605-6813624 MS.gene70101:CDS 40.0%
GAAGAAAAGTAAGCCACGTA+AGG - chr4.1:6812372-6812391 MS.gene70101:intron 40.0%
GAGGTCTTGAAAAGGAAGTT+AGG - chr4.1:6812193-6812212 MS.gene70101:CDS 40.0%
GATCCGATATAATTGTGACC+TGG + chr4.1:6810176-6810195 None:intergenic 40.0%
GATGAAGTGCACACTCTAAT+TGG - chr4.1:6811147-6811166 MS.gene70101:intron 40.0%
GATTGGTACTAATCGAGCTA+AGG - chr4.1:6809503-6809522 MS.gene70101:CDS 40.0%
GGAAAATTGGATCCTGTTGT+GGG - chr4.1:6810644-6810663 MS.gene70101:intron 40.0%
GGAAGTTAGGCAGATAGTAA+AGG - chr4.1:6812206-6812225 MS.gene70101:CDS 40.0%
GTATAACCAACATATCCTGG+AGG + chr4.1:6813023-6813042 None:intergenic 40.0%
GTCGAGGTAGAGAAGATAAT+TGG - chr4.1:6809738-6809757 MS.gene70101:CDS 40.0%
TATCCCTGTTGACAAAGTCT+CGG - chr4.1:6812707-6812726 MS.gene70101:CDS 40.0%
TCAAGCCTATTCAAGAACTC+TGG + chr4.1:6813359-6813378 None:intergenic 40.0%
TCATGTTGAAGACATCAGGA+TGG + chr4.1:6813121-6813140 None:intergenic 40.0%
TCGCAACCAAGAGTTTGAAA+AGG - chr4.1:6812245-6812264 MS.gene70101:CDS 40.0%
TCTCAGTGACAGAGAGATTT+AGG - chr4.1:6813483-6813502 MS.gene70101:CDS 40.0%
TGACCTTGACTATGATGAGA+AGG - chr4.1:6813274-6813293 MS.gene70101:CDS 40.0%
TGAGTGACACGTTCAATTTG+TGG + chr4.1:6810677-6810696 None:intergenic 40.0%
TGTATGGTTTCAGGAACAGT+TGG + chr4.1:6811580-6811599 None:intergenic 40.0%
TGTCCTTCTCATCATAGTCA+AGG + chr4.1:6813280-6813299 None:intergenic 40.0%
TTAGGCCAGAGTTCTTGAAT+AGG - chr4.1:6813351-6813370 MS.gene70101:CDS 40.0%
TTCAAATCCTAGAAGATGGG+AGG - chr4.1:6813144-6813163 MS.gene70101:CDS 40.0%
TTCTTTCCCTCTATGGTTTC+GGG + chr4.1:6810809-6810828 None:intergenic 40.0%
TTGGACTTAAGAACCCTAAC+AGG - chr4.1:6812838-6812857 MS.gene70101:intron 40.0%
TTTCAGGCAACTCACTAAAC+TGG - chr4.1:6813391-6813410 MS.gene70101:CDS 40.0%
! ATCAAAGAGTACAACCGTGT+AGG + chr4.1:6813084-6813103 None:intergenic 40.0%
! GAACGTGTCACTCAAATCTT+GGG - chr4.1:6810683-6810702 MS.gene70101:intron 40.0%
! GATTTTATTCAGGGGGTAAG+GGG - chr4.1:6810870-6810889 MS.gene70101:intron 40.0%
! GGCGTGATTTATGTTTTGTC+CGG - chr4.1:6810045-6810064 MS.gene70101:CDS 40.0%
! TATGTTGGTTATACTGAGGG+TGG - chr4.1:6813029-6813048 MS.gene70101:intron 40.0%
! TCAAAGAGTACAACCGTGTA+GGG + chr4.1:6813083-6813102 None:intergenic 40.0%
! TGAACGTGTCACTCAAATCT+TGG - chr4.1:6810682-6810701 MS.gene70101:intron 40.0%
!! AAAAAGATCCAGCTTTGGAG+AGG - chr4.1:6811527-6811546 MS.gene70101:intron 40.0%
!! AGAAAAGAACTGCTGGTTCA+GGG + chr4.1:6812114-6812133 None:intergenic 40.0%
!! AGTAATTATGTTGGCTCAGG+AGG - chr4.1:6809590-6809609 MS.gene70101:CDS 40.0%
!! ATAGTGGATGCTGATTCTGA+TGG - chr4.1:6813638-6813657 MS.gene70101:CDS 40.0%
!! CTATTGGGTCTTATTGGTGA+AGG - chr4.1:6809657-6809676 MS.gene70101:CDS 40.0%
!! CTTTTGGGTCTTCTTAGAGA+GGG - chr4.1:6810206-6810225 MS.gene70101:CDS 40.0%
!!! CTAAGGTTTTGAAGTCCATG+GGG - chr4.1:6809694-6809713 MS.gene70101:CDS 40.0%
!!! GCTAAGGTTTTGAAGTCCAT+GGG - chr4.1:6809693-6809712 MS.gene70101:CDS 40.0%
AAGCAGTAGAAGCCATTAGC+AGG - chr4.1:6812796-6812815 MS.gene70101:intron 45.0%
AAGGAGCAGCTAGATCAAGA+AGG - chr4.1:6809349-6809368 MS.gene70101:CDS 45.0%
AATTGGATCCTGTTGTGGGT+AGG - chr4.1:6810648-6810667 MS.gene70101:intron 45.0%
ACAAGGCTTTCACGTCATTC+AGG + chr4.1:6810993-6811012 None:intergenic 45.0%
ACCAACCTTCTTTCCCTCTA+TGG + chr4.1:6810816-6810835 None:intergenic 45.0%
ACCATAGAGGGAAAGAAGGT+TGG - chr4.1:6810812-6810831 MS.gene70101:intron 45.0%
ACCCAGACTGTCTAGTTACT+CGG - chr4.1:6809407-6809426 MS.gene70101:CDS 45.0%
ACTGGAGGTTAAGGAGATAG+CGG - chr4.1:6813409-6813428 MS.gene70101:CDS 45.0%
AGAGAGATTTAGGGAGAGAG+TGG - chr4.1:6813493-6813512 MS.gene70101:CDS 45.0%
AGAGGCAAGAGGTCTTGAAA+AGG - chr4.1:6812185-6812204 MS.gene70101:CDS 45.0%
AGCAGTAGAAGCCATTAGCA+GGG - chr4.1:6812797-6812816 MS.gene70101:intron 45.0%
AGTCTTGGAACTCTCATTGG+AGG - chr4.1:6809815-6809834 MS.gene70101:CDS 45.0%
ATAATCCTAGTTATGGGGCC+AGG - chr4.1:6813528-6813547 MS.gene70101:CDS 45.0%
ATGGGAACAGGTTATTCGCA+TGG - chr4.1:6810409-6810428 MS.gene70101:CDS 45.0%
ATTGTGCTCAACGGTAGTAC+TGG - chr4.1:6813668-6813687 MS.gene70101:CDS 45.0%
CAACCGAGACTTTGTCAACA+GGG + chr4.1:6812713-6812732 None:intergenic 45.0%
CAAGCTCCGTTATACTGATG+AGG - chr4.1:6811639-6811658 MS.gene70101:intron 45.0%
CAAGGTCAAATCCTATGCGA+CGG + chr4.1:6813262-6813281 None:intergenic 45.0%
CAATTTGACCAAGCTAGCAG+AGG - chr4.1:6810517-6810536 MS.gene70101:intron 45.0%
CACACAGTCTCCAAACTCAT+TGG - chr4.1:6812993-6813012 MS.gene70101:intron 45.0%
CATATTGTTGCCTCTTGGAC+TGG - chr4.1:6812684-6812703 MS.gene70101:intron 45.0%
CGAAACCATAGAGGGAAAGA+AGG - chr4.1:6810808-6810827 MS.gene70101:intron 45.0%
GAAAAGATGAAGCTGGCGAT+TGG + chr4.1:6812864-6812883 None:intergenic 45.0%
GAACAGGTTATTCGCATGGT+TGG - chr4.1:6810413-6810432 MS.gene70101:CDS 45.0%
GAGAGTCTTGGAACTCTCAT+TGG - chr4.1:6809812-6809831 MS.gene70101:CDS 45.0%
GATATGGGTCTACTTGTAGC+GGG - chr4.1:6811039-6811058 MS.gene70101:intron 45.0%
GATTAATGTCCCTGGTCTAG+TGG - chr4.1:6809299-6809318 MS.gene70101:CDS 45.0%
GGAAACGTGATTGTGCTCAA+CGG - chr4.1:6813659-6813678 MS.gene70101:CDS 45.0%
GGGAAAATTGGATCCTGTTG+TGG - chr4.1:6810643-6810662 MS.gene70101:intron 45.0%
GGGAGGCTAACAGATAGTAA+GGG - chr4.1:6813161-6813180 MS.gene70101:CDS 45.0%
GTCCTCCAAAAGTCGCATTA+TGG + chr4.1:6813567-6813586 None:intergenic 45.0%
GTCTCGCATAGTGCTTGTAT+GGG - chr4.1:6811897-6811916 MS.gene70101:CDS 45.0%
GTCTGAATTGGCTAAGGCAT+TGG - chr4.1:6812905-6812924 MS.gene70101:intron 45.0%
GTTACTACTTCCAGAGCCAA+CGG + chr4.1:6810465-6810484 None:intergenic 45.0%
TCAACCGAGACTTTGTCAAC+AGG + chr4.1:6812714-6812733 None:intergenic 45.0%
TCCAACTAATATTCGCACCC+AGG - chr4.1:6810271-6810290 MS.gene70101:CDS 45.0%
TCTTGCTAGAGGTGAACTAC+AGG - chr4.1:6811221-6811240 MS.gene70101:intron 45.0%
TCTTTCCCTCTATGGTTTCG+GGG + chr4.1:6810808-6810827 None:intergenic 45.0%
TGAATAGGCTGGAGAGCTAA+GGG - chr4.1:6812542-6812561 MS.gene70101:CDS 45.0%
TGAGAGTTCCAAGACTCTCT+TGG + chr4.1:6809811-6809830 None:intergenic 45.0%
TGGAGGTGAACCAATGAGTT+TGG + chr4.1:6813006-6813025 None:intergenic 45.0%
TGGCTGAAAAGATGCTTGCT+AGG - chr4.1:6813591-6813610 MS.gene70101:CDS 45.0%
TGGGAGGCTAACAGATAGTA+AGG - chr4.1:6813160-6813179 MS.gene70101:CDS 45.0%
TGGTGAAGGAACTGGTATTG+CGG - chr4.1:6809671-6809690 MS.gene70101:CDS 45.0%
TGTCTCGCATAGTGCTTGTA+TGG - chr4.1:6811896-6811915 MS.gene70101:CDS 45.0%
TTGAGCAAGACCTTCAGCAA+TGG + chr4.1:6810765-6810784 None:intergenic 45.0%
TTGCTGAAGGTCTTGCTCAA+CGG - chr4.1:6810765-6810784 MS.gene70101:CDS 45.0%
! ACGAGCCATAATGCGACTTT+TGG - chr4.1:6813559-6813578 MS.gene70101:CDS 45.0%
! AGAGCATCTGGCAATGAATC+TGG + chr4.1:6813698-6813717 None:intergenic 45.0%
! AGCCATAATGCGACTTTTGG+AGG - chr4.1:6813562-6813581 MS.gene70101:CDS 45.0%
! AGGAATCATGTCGAGGGTTT+TGG - chr4.1:6809269-6809288 MS.gene70101:CDS 45.0%
! ATCGCCAGCTTCATCTTTTC+TGG - chr4.1:6812864-6812883 MS.gene70101:intron 45.0%
! ATGCCAACTTTGGAGGAGTA+TGG - chr4.1:6810491-6810510 MS.gene70101:intron 45.0%
! CATCAGTATAACGGAGCTTG+TGG + chr4.1:6811639-6811658 None:intergenic 45.0%
! CTCTGCTAGCTTGGTCAAAT+TGG + chr4.1:6810519-6810538 None:intergenic 45.0%
! GCATTGGCCTCATACTACTT+TGG - chr4.1:6812921-6812940 MS.gene70101:intron 45.0%
! GCTTGCTAGGGAGATTAAAG+AGG - chr4.1:6813604-6813623 MS.gene70101:CDS 45.0%
! GGCTGAAAAGATGCTTGCTA+GGG - chr4.1:6813592-6813611 MS.gene70101:CDS 45.0%
! TCTAAGGTGCTCACTCAGAT+TGG - chr4.1:6809486-6809505 MS.gene70101:CDS 45.0%
!! AAACTCATTGGTTCACCTCC+AGG - chr4.1:6813005-6813024 MS.gene70101:intron 45.0%
!! AATTATGTTGGCTCAGGAGG+AGG - chr4.1:6809593-6809612 MS.gene70101:CDS 45.0%
!! AGCCTTGTTCTGCATGATGT+AGG - chr4.1:6811005-6811024 MS.gene70101:intron 45.0%
!! CTTGCTCAACGGATTGCAAA+TGG - chr4.1:6810776-6810795 MS.gene70101:CDS 45.0%
!! GAGAAAAGAACTGCTGGTTC+AGG + chr4.1:6812115-6812134 None:intergenic 45.0%
!! GCTTTTGGGTCTTCTTAGAG+AGG - chr4.1:6810205-6810224 MS.gene70101:CDS 45.0%
!! GGATCTGAGCACTTGCTTTT+GGG - chr4.1:6810191-6810210 MS.gene70101:CDS 45.0%
!! GGTCTTATTGGTGAAGGAAC+TGG - chr4.1:6809663-6809682 MS.gene70101:CDS 45.0%
!! GTTATTCGCATGGTTGGTGA+GGG - chr4.1:6810419-6810438 MS.gene70101:intron 45.0%
!! TTCATCTTTTCTGGCCCTAC+TGG - chr4.1:6812873-6812892 MS.gene70101:intron 45.0%
!!! GGCTAAGGTTTTGAAGTCCA+TGG - chr4.1:6809692-6809711 MS.gene70101:CDS 45.0%
!! ATATAATAAAAATACATAAA+AGG + chr4.1:6810320-6810339 None:intergenic 5.0%
AACAGGGATACCAGTCCAAG+AGG + chr4.1:6812697-6812716 None:intergenic 50.0%
AATCGAGCTAAGGGTGGTAG+AGG - chr4.1:6809513-6809532 MS.gene70101:CDS 50.0%
AGAGGGCGACTCTGTTATAG+TGG - chr4.1:6813622-6813641 MS.gene70101:CDS 50.0%
AGCTGAAGGGGCAATTGATG+CGG - chr4.1:6811179-6811198 MS.gene70101:intron 50.0%
AGGAACTGGTATTGCGGCTA+AGG - chr4.1:6809677-6809696 MS.gene70101:CDS 50.0%
AGGGCCAGAAAAGATGAAGC+TGG + chr4.1:6812871-6812890 None:intergenic 50.0%
AGTCCGACTTCAACATGCAC+AGG - chr4.1:6812070-6812089 MS.gene70101:intron 50.0%
AGTTACCTCCTCTGCTAGCT+TGG + chr4.1:6810528-6810547 None:intergenic 50.0%
AGTTCACCTCTAGCAAGAGC+TGG + chr4.1:6811219-6811238 None:intergenic 50.0%
CAGGCAACTCACTAAACTGG+AGG - chr4.1:6813394-6813413 MS.gene70101:CDS 50.0%
CAGTTACCTGAAGAGGCAAG+AGG - chr4.1:6812174-6812193 MS.gene70101:CDS 50.0%
CCAGGTTCCCCAATAAGACA+AGG + chr4.1:6810728-6810747 None:intergenic 50.0%
CCCAGACTGTCTAGTTACTC+GGG - chr4.1:6809408-6809427 MS.gene70101:CDS 50.0%
CCCGAGTAACTAGACAGTCT+GGG + chr4.1:6809411-6809430 None:intergenic 50.0%
CCTAAAAGATGCACGTGTCG+AGG - chr4.1:6809722-6809741 MS.gene70101:CDS 50.0%
CGCATTATGGCTCGTCTTAG+AGG + chr4.1:6813554-6813573 None:intergenic 50.0%
CTGAATAGGCTGGAGAGCTA+AGG - chr4.1:6812541-6812560 MS.gene70101:CDS 50.0%
CTTATTGGGGAACCTGGTGT+CGG - chr4.1:6810731-6810750 MS.gene70101:CDS 50.0%
GATGAACAAGGCAGAGAGTG+AGG - chr4.1:6812620-6812639 MS.gene70101:intron 50.0%
GATGTCCCCGAAACCATAGA+GGG - chr4.1:6810800-6810819 MS.gene70101:intron 50.0%
GCCTGGGTGCGAATATTAGT+TGG + chr4.1:6810275-6810294 None:intergenic 50.0%
GCTCTGGCACTTTAACAGGT+TGG + chr4.1:6811558-6811577 None:intergenic 50.0%
GGAAAGACAGCCATTGCTGA+AGG - chr4.1:6810752-6810771 MS.gene70101:CDS 50.0%
GGAAGCAGTGTGATCGAGAA+AGG - chr4.1:6813233-6813252 MS.gene70101:CDS 50.0%
GGGGAAGTCTGAATTGGCTA+AGG - chr4.1:6812899-6812918 MS.gene70101:intron 50.0%
GGTACTAATCGAGCTAAGGG+TGG - chr4.1:6809507-6809526 MS.gene70101:CDS 50.0%
GGTCTTCTTAGAGAGGGTGA+AGG - chr4.1:6810212-6810231 MS.gene70101:CDS 50.0%
GGTTCACCTCCAGGATATGT+TGG - chr4.1:6813014-6813033 MS.gene70101:intron 50.0%
GTACTCCACTTGATGGGAAC+AGG - chr4.1:6810397-6810416 MS.gene70101:CDS 50.0%
GTCAACTGACTGAGGCAGTT+CGG - chr4.1:6813051-6813070 MS.gene70101:intron 50.0%
GTGCACACTCTAATTGGAGC+AGG - chr4.1:6811153-6811172 MS.gene70101:intron 50.0%
GTGCATGTTGAAGTCGGACT+CGG + chr4.1:6812070-6812089 None:intergenic 50.0%
GTGCCATACTCCTCCAAAGT+TGG + chr4.1:6810497-6810516 None:intergenic 50.0%
TAAGTCCAACACGAGCTCGA+CGG + chr4.1:6812827-6812846 None:intergenic 50.0%
TCAAGACCTCTTGCCTCTTC+AGG + chr4.1:6812183-6812202 None:intergenic 50.0%
TCCCGAGTAACTAGACAGTC+TGG + chr4.1:6809412-6809431 None:intergenic 50.0%
TCTTAGAGAGGGTGAAGGTG+TGG - chr4.1:6810217-6810236 MS.gene70101:CDS 50.0%
TGATGTCCCCGAAACCATAG+AGG - chr4.1:6810799-6810818 MS.gene70101:intron 50.0%
TGCATGTTGAAGTCGGACTC+GGG + chr4.1:6812069-6812088 None:intergenic 50.0%
TGGTGTGGGGAAGTCTGAAT+TGG - chr4.1:6812893-6812912 MS.gene70101:intron 50.0%
TTGAAGCCAGCTCTTGCTAG+AGG - chr4.1:6811210-6811229 MS.gene70101:intron 50.0%
TTGGAGGAAGCTCGTCAACT+TGG - chr4.1:6809831-6809850 MS.gene70101:CDS 50.0%
TTTGACCAAGCTAGCAGAGG+AGG - chr4.1:6810520-6810539 MS.gene70101:intron 50.0%
! AATCAAGAGCTTGGTGACCG+AGG - chr4.1:6813313-6813332 MS.gene70101:CDS 50.0%
! CCTCGACACGTGCATCTTTT+AGG + chr4.1:6809725-6809744 None:intergenic 50.0%
! CCTTGTCTTATTGGGGAACC+TGG - chr4.1:6810725-6810744 MS.gene70101:CDS 50.0%
! CGGATCTGAGCACTTGCTTT+TGG - chr4.1:6810190-6810209 MS.gene70101:CDS 50.0%
! CGGCTGGGACACAATTTTGT+TGG - chr4.1:6809621-6809640 MS.gene70101:CDS 50.0%
! CTGTTAGCCTCCCATCTTCT+AGG + chr4.1:6813154-6813173 None:intergenic 50.0%
! GGTTATTCGCATGGTTGGTG+AGG - chr4.1:6810418-6810437 MS.gene70101:CDS 50.0%
! GTAGCGGGAACTAAATACCG+TGG - chr4.1:6811054-6811073 MS.gene70101:intron 50.0%
! GTTTCAGGAACAGTTGGCTC+TGG + chr4.1:6811574-6811593 None:intergenic 50.0%
!! AGAACTGCTGGTTCAGGGAA+TGG + chr4.1:6812109-6812128 None:intergenic 50.0%
!! GTGAGGGTGCTGATAGTGTT+GGG - chr4.1:6810435-6810454 MS.gene70101:intron 50.0%
!! GTTGGCTCTGGCACTTTAAC+AGG + chr4.1:6811562-6811581 None:intergenic 50.0%
!! TGAGGGTGCTGATAGTGTTG+GGG - chr4.1:6810436-6810455 MS.gene70101:intron 50.0%
!! TTTTCTGGCCCTACTGGTGT+GGG - chr4.1:6812879-6812898 MS.gene70101:intron 50.0%
AACAAGGCAGAGAGTGAGGC+AGG - chr4.1:6812624-6812643 MS.gene70101:intron 55.0%
AATGTCCCTGGTCTAGTGGC+TGG - chr4.1:6809303-6809322 MS.gene70101:CDS 55.0%
ATGGCTGTCTTTCCGACACC+AGG + chr4.1:6810746-6810765 None:intergenic 55.0%
ATTGGAGCAGGAGCAGCTGA+AGG - chr4.1:6811165-6811184 MS.gene70101:intron 55.0%
CAAGACTCTCTTGGCACGTG+GGG + chr4.1:6809802-6809821 None:intergenic 55.0%
CAGACTTCCCCACACCAGTA+GGG + chr4.1:6812890-6812909 None:intergenic 55.0%
CCAAGACTCTCTTGGCACGT+GGG + chr4.1:6809803-6809822 None:intergenic 55.0%
CTCTTGGCACGTGGGGTAAA+CGG + chr4.1:6809795-6809814 None:intergenic 55.0%
GAGAGTGAGGCAGGAGATGT+AGG - chr4.1:6812633-6812652 MS.gene70101:intron 55.0%
GCGCAGTCGATTAATGTCCC+TGG - chr4.1:6809291-6809310 MS.gene70101:CDS 55.0%
TATGGCTCGTCTTAGAGGCC+TGG + chr4.1:6813549-6813568 None:intergenic 55.0%
TCAGACTTCCCCACACCAGT+AGG + chr4.1:6812891-6812910 None:intergenic 55.0%
TCCAAGACTCTCTTGGCACG+TGG + chr4.1:6809804-6809823 None:intergenic 55.0%
TCGACGGATAGCCCTGCTAA+TGG + chr4.1:6812811-6812830 None:intergenic 55.0%
TGAGGGTGGTCAACTGACTG+AGG - chr4.1:6813043-6813062 MS.gene70101:intron 55.0%
TGGAATCGCCTCTCCAAAGC+TGG + chr4.1:6811538-6811557 None:intergenic 55.0%
TTCGACCAGCCACTAGACCA+GGG + chr4.1:6809311-6809330 None:intergenic 55.0%
TTGGAGCAGGAGCAGCTGAA+GGG - chr4.1:6811166-6811185 MS.gene70101:intron 55.0%
! GATAGTGTTGGGGCTACCGT+TGG - chr4.1:6810446-6810465 MS.gene70101:intron 55.0%
! TTTCTGGCCCTACTGGTGTG+GGG - chr4.1:6812880-6812899 MS.gene70101:intron 55.0%
!! AAGCTGGCGATTGGCCTGTT+AGG + chr4.1:6812855-6812874 None:intergenic 55.0%
!! ACTGCTGGTTCAGGGAATGG+TGG + chr4.1:6812106-6812125 None:intergenic 55.0%
!! AGCTGGCGATTGGCCTGTTA+GGG + chr4.1:6812854-6812873 None:intergenic 55.0%
!! CTTTTCTGGCCCTACTGGTG+TGG - chr4.1:6812878-6812897 MS.gene70101:intron 55.0%
!! GCGACTTTTGGAGGACAGCA+TGG - chr4.1:6813571-6813590 MS.gene70101:CDS 55.0%
!! GGTGAGGGTGCTGATAGTGT+TGG - chr4.1:6810434-6810453 MS.gene70101:intron 55.0%
AGAGGCCTGGCCCCATAACT+AGG + chr4.1:6813536-6813555 None:intergenic 60.0%
AGGGAGAGAGTGGTCGACGA+AGG - chr4.1:6813503-6813522 MS.gene70101:CDS 60.0%
AGTTCGGCGTCGTCCCTACA+CGG - chr4.1:6813067-6813086 MS.gene70101:intron 60.0%
CCCACGTGCCAAGAGAGTCT+TGG - chr4.1:6809800-6809819 MS.gene70101:CDS 60.0%
CTTCGACCAGCCACTAGACC+AGG + chr4.1:6809312-6809331 None:intergenic 60.0%
GCTATCCGTCGAGCTCGTGT+TGG - chr4.1:6812819-6812838 MS.gene70101:intron 60.0%
TCTGGGTGCAGCAGTTCGTG+TGG + chr4.1:6809394-6809413 None:intergenic 60.0%
TGGAGCAGGAGCAGCTGAAG+GGG - chr4.1:6811167-6811186 MS.gene70101:intron 60.0%
TGTGGCTGCCTACCCACAAC+AGG + chr4.1:6810659-6810678 None:intergenic 60.0%
! CTGGTCTAGTGGCTGGTCGA+AGG - chr4.1:6809310-6809329 MS.gene70101:CDS 60.0%
!! TGTTGGCTCAGGAGGAGGCA+AGG - chr4.1:6809598-6809617 MS.gene70101:CDS 60.0%
TGGCTCAGGAGGAGGCAAGG+CGG - chr4.1:6809601-6809620 MS.gene70101:CDS 65.0%
!! GTTGGGGCTACCGTTGGCTC+TGG - chr4.1:6810452-6810471 MS.gene70101:intron 65.0%
CAGGAGGAGGCAAGGCGGCT+GGG - chr4.1:6809606-6809625 MS.gene70101:CDS 70.0%
TCAGGAGGAGGCAAGGCGGC+TGG - chr4.1:6809605-6809624 MS.gene70101:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 6809259 6813727 6809259 ID=MS.gene70101
chr4.1 mRNA 6809259 6813727 6809259 ID=MS.gene70101.t1;Parent=MS.gene70101
chr4.1 exon 6813134 6813727 6813134 ID=MS.gene70101.t1.exon1;Parent=MS.gene70101.t1
chr4.1 CDS 6813134 6813727 6813134 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
chr4.1 exon 6812694 6812809 6812694 ID=MS.gene70101.t1.exon2;Parent=MS.gene70101.t1
chr4.1 CDS 6812694 6812809 6812694 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
chr4.1 exon 6812445 6812567 6812445 ID=MS.gene70101.t1.exon3;Parent=MS.gene70101.t1
chr4.1 CDS 6812445 6812567 6812445 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
chr4.1 exon 6812157 6812342 6812157 ID=MS.gene70101.t1.exon4;Parent=MS.gene70101.t1
chr4.1 CDS 6812157 6812342 6812157 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
chr4.1 exon 6811744 6811959 6811744 ID=MS.gene70101.t1.exon5;Parent=MS.gene70101.t1
chr4.1 CDS 6811744 6811959 6811744 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
chr4.1 exon 6811285 6811502 6811285 ID=MS.gene70101.t1.exon6;Parent=MS.gene70101.t1
chr4.1 CDS 6811285 6811502 6811285 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
chr4.1 exon 6810895 6810970 6810895 ID=MS.gene70101.t1.exon7;Parent=MS.gene70101.t1
chr4.1 CDS 6810895 6810970 6810895 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
chr4.1 exon 6810720 6810809 6810720 ID=MS.gene70101.t1.exon8;Parent=MS.gene70101.t1
chr4.1 CDS 6810720 6810809 6810720 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
chr4.1 exon 6809259 6810437 6809259 ID=MS.gene70101.t1.exon9;Parent=MS.gene70101.t1
chr4.1 CDS 6809259 6810437 6809259 ID=cds.MS.gene70101.t1;Parent=MS.gene70101.t1
Gene Sequence

>MS.gene70101

CGAACAATTCAGGAATCATGTCGAGGGTTTTGGCGCAGTCGATTAATGTCCCTGGTCTAGTGGCTGGTCGAAGGCATGTCAATAACAACAAAGGAGCAGCTAGATCAAGAAGGTCTGTCAGAATGATGTTTACCACACGAACTGCTGCACCCAGACTGTCTAGTTACTCGGGATTACGTACTTTGAATTCTTTGGATTCAATGTTTAGACCTGGCCAAGATTTTCATTCTAAGGTGCTCACTCAGATTGGTACTAATCGAGCTAAGGGTGGTAGAGGTAGCAGATGCGTTACTAAAGCCATGTTTGAGCGTTTTACAGAGAAAGCTATCAAAGTAATTATGTTGGCTCAGGAGGAGGCAAGGCGGCTGGGACACAATTTTGTTGGAACTGAACAGATTCTATTGGGTCTTATTGGTGAAGGAACTGGTATTGCGGCTAAGGTTTTGAAGTCCATGGGGATTAACCTAAAAGATGCACGTGTCGAGGTAGAGAAGATAATTGGAAGGGGAAGTGGTTTTGTCGCTGTTGAGATTCCGTTTACCCCACGTGCCAAGAGAGTCTTGGAACTCTCATTGGAGGAAGCTCGTCAACTTGGTAAACGATAGCATACTTTTATAATGTCGTTTTGCATATCTAATCAATTACTTTGTTTACAAAAAATGTGTTCACGACTTATTATTTGTATGATATATTCCAAACATGACTTGATTTTTGCTTTGAGTGATCTGTCGGTTGACTAATTTGAATTATTTTCATTCAAAGTGAGTTGAAATTTATCCATGAATTGGCGTGATTTATGTTTTGTCCGGCCTTTCTGTTCTTTTGTTTATTTTATTTGGAGTGTTTAAAAATTAGTATTCACGTGCAATACTTTGCTTGTGCTTGCTGAAAGTTTGCCTTACATTTTGCAATTTCCAGGTCACAATTATATCGGATCTGAGCACTTGCTTTTGGGTCTTCTTAGAGAGGGTGAAGGTGTGGCAGCACGTGTTCTTGAAAATTTGGGTGCTGATCCAACTAATATTCGCACCCAGGCAAGTATTATGTCATCATTTATTCCTTTTATGTATTTTTATTATATAAGAACATGTTTTCATTTCACTTTTTATCTGAATTTATGTTTTTGTGTGTTAATCTTGTACTCCACTTGATGGGAACAGGTTATTCGCATGGTTGGTGAGGGTGCTGATAGTGTTGGGGCTACCGTTGGCTCTGGAAGTAGTAACAATAAGATGCCAACTTTGGAGGAGTATGGCACCAATTTGACCAAGCTAGCAGAGGAGGTAACTTACAATTCCTAGTTTTCTTCATGACAGATGGTAGATAATGTCTCAGTCTGTGTTGATGCTTACCAATTTTTCTCTTTCGTGATGTCAAAATCACAGGGAAAATTGGATCCTGTTGTGGGTAGGCAGCCACAAATTGAACGTGTCACTCAAATCTTGGGTCGTCGTACCAAAAATAATCCTTGTCTTATTGGGGAACCTGGTGTCGGAAAGACAGCCATTGCTGAAGGTCTTGCTCAACGGATTGCAAATGGTGATGTCCCCGAAACCATAGAGGGAAAGAAGGTTGGTGTTTGTTTCTATCTCTAGCCCATAAATTGTTTTTGATTTTATTCAGGGGGTAAGGGGTTTGCTCTTTCATTTTCAGCACCTTGAACATGTTTAACTTGCTCAATCTTGATCTGATTATAATTCTTAGATGTGGAATTTTAGTACTTTCGGGTGTCCTGAATGACGTGAAAGCCTTGTTCTGCATGATGTAGGTTATAACCCTAGATATGGGTCTACTTGTAGCGGGAACTAAATACCGTGGAGAATTTGAAGAAAGATTGAAAAAACTAATGGAGGAAATCAAACAAAGTGATGAAATAATACTTTTCATTGATGAAGTGCACACTCTAATTGGAGCAGGAGCAGCTGAAGGGGCAATTGATGCGGCAAACATATTGAAGCCAGCTCTTGCTAGAGGTGAACTACAGGTAATGTTTTCTTTTGGCATCTCAAAAATGGATACGCTGCACTTTTGACTTGCAGATCAATGAAAATATGTATGCAGAAGTTTCAATAATAAGCTTTTGATTACTTCTATCTATAAAAAAGTGTACACATTTTCACAGTTCATTTTTAATCAATAGTATTAAAAAATTTAAATTCTTAATGATCATTTTGGATTGTCTATGAAATGTAAAGACTGAAGGCATAATTAAAATACTTATGCAGTGTATAGGAGCCACAACTCTAGATGAATATAGGAAGCACATTGAAAAAGATCCAGCTTTGGAGAGGCGATTCCAACCTGTTAAAGTGCCAGAGCCAACTGTTCCTGAAACCATACAAATACTGAAAGGACTTAGAGAGCGCTATGAGATTCACCACAAGCTCCGTTATACTGATGAGGCTCTTGTAGCTGCTGCAGAGCTGTCGCATCAATATATTAGGTTTGTCATAATTTATATTTATGCACATTCTCTGCCCGTTTTCAATTTTAATTTATGATGTGGAAAAGAGAATTTTTTTATAGTTCTGGTATTACATGTTTAAATGGGAATTTTTAAACCGAAGTTAATCATCTGGAATTTAGTATTATGCCTTTGAATTGTTTTACAACATTATTTTGGAACTCTCACGTAGTTGTCTCGCATAGTGCTTGTATGGGAATGAATCAAACTGCACCTTCTTCTATCTTGTTATCTTCTACTTGCTGTTTATCTCAAGTGTTTTCTCGCTCATAAAATAATTATGATTTTTGCAGTGATCGATTTTTGCCTGACAAAGCTATAGATTTGATTGATGAAGCTGGTTCCCGAGTCCGACTTCAACATGCACAGGTATTGTTCATCCACCATTCCCTGAACCAGCAGTTCTTTTCTCGTCTATTATTGAGCTAATTGTGTCAGATTTACATACTTGCAGTTACCTGAAGAGGCAAGAGGTCTTGAAAAGGAAGTTAGGCAGATAGTAAAGGAGAAAGATGAAGCTGTTCGCAACCAAGAGTTTGAAAAGGTAATGCTTTAATTTAAAACTTAACTTGTAAACTTTAACATAACCCCACATTTTTAGGATACTCAACCACCTTTTTTCCAGTGAGATTACATTATATTTTTCAAAGAAGAAAAGTAAGCCACGTAAGGCTGTTTTATCTTTCCTAAAGTTCTATAGCGGCTTTGTTCTCTAGTTTTTGTTTGAAGACATTGTAGTGGTTTGTTCCTTCAATTATATATATCCAAATTCCTTTACATTCTGGGTAATAAATAGTGGGCTGATGATACCTTAATTTCTGAATAGGCTGGAGAGCTAAGGGATAAAGAAATGGATCTCAAGACTCAGATATCAGCACTTATAGAAAAAAACAAGGAGATGAACAAGGCAGAGAGTGAGGCAGGAGATGTAGGTGCACTTGTGACTGAAGTTGACATACAACATATTGTTGCCTCTTGGACTGGTATCCCTGTTGACAAAGTCTCGGTTGACGAATCTGATCGTCTTCTCAAGATGGAAGACACATTACACAAACGCATTATTGGTCAGCATGAAGCAGTAGAAGCCATTAGCAGGGCTATCCGTCGAGCTCGTGTTGGACTTAAGAACCCTAACAGGCCAATCGCCAGCTTCATCTTTTCTGGCCCTACTGGTGTGGGGAAGTCTGAATTGGCTAAGGCATTGGCCTCATACTACTTTGGATCTGAAGAAGCCATGATTCGTCTTGATATGAGTGAATTCATGGAAAGGCACACAGTCTCCAAACTCATTGGTTCACCTCCAGGATATGTTGGTTATACTGAGGGTGGTCAACTGACTGAGGCAGTTCGGCGTCGTCCCTACACGGTTGTACTCTTTGATGAGATTGAGAAAGCCCATCCTGATGTCTTCAACATGATGCTTCAAATCCTAGAAGATGGGAGGCTAACAGATAGTAAGGGAAGAACTGTGGACTTCAAGAACACACTTCTTATAATGACATCAAATGTTGGAAGCAGTGTGATCGAGAAAGGAGGCCGTCGCATAGGATTTGACCTTGACTATGATGAGAAGGACAGCAGTTATAACAGAATCAAGAGCTTGGTGACCGAGGAGCTGAAACAATACTTTAGGCCAGAGTTCTTGAATAGGCTTGATGAAATGATTGTTTTCAGGCAACTCACTAAACTGGAGGTTAAGGAGATAGCGGATATAATGTTGAAGGAGGTGTTCGAGAGACTGAAAACCAAAGAGATTGAACTCTCAGTGACAGAGAGATTTAGGGAGAGAGTGGTCGACGAAGGTTATAATCCTAGTTATGGGGCCAGGCCTCTAAGACGAGCCATAATGCGACTTTTGGAGGACAGCATGGCTGAAAAGATGCTTGCTAGGGAGATTAAAGAGGGCGACTCTGTTATAGTGGATGCTGATTCTGATGGAAACGTGATTGTGCTCAACGGTAGTACTGGTGCTCCAGATTCATTGCCAGATGCTCTTCCTGTGTAA

Protein sequence

>MS.gene70101.t1

RTIQESCRGFWRSRLMSLVUWLVEGMSITTKEQLDQEGLSEUCLPHELLHPDCLVTRDYVLUILWIQCLDLAKIFILRCSLRLVLIELRVVEVADALLKPCLSVLQRKLSKULCWLRRRQGGWDTILLELNRFYWVLLVKELVLRLRFUSPWGLTUKMHVSRURRULEGEVVLSLLRFRLPHVPRESWNSHWRKLVNLVTIISDLSTCFWVFLERVKVWQHVFLKIWVLIQLIFAPRLFAWLVRVLIVLGLPLALEVVTIRCQLWRSMAPIUPSUQRRENWILLWVGSHKLNVSLKSWVVVPKIILVLLGNLVSERQPLLKVLLNGLQMVMSPKPURERRLUPUIWVYLURELNTVENLKKDUKNUWRKSNKVMKUYFSLMKCTLULEQEQLKGQLMRQTYUSQLLLEVNYSVUEPQLUMNIGSTLKKIQLWRGDSNLLKCQSQLFLKPYKYUKDLESAMRFTTSSVILMRLLULLQSCRINILVIDFCLTKLUIULMKLVPESDFNMHSYLKRQEVLKRKLGRUURRKMKLFATKSLKRLESUGIKKWISRLRYQHLUKKTRRUTRQRVRQEMUVHLULKLTYNILLPLGLVSLLTKSRLTNLIVFSRWKTHYTNALLVSMKQUKPLAGLSVELVLDLRTLTGQSPASSFLALLVWGSLNWLRHWPHTTLDLKKPUFVLIUVNSWKGTQSPNSLVHLQDMLVILRVVNULRQFGVVPTRLYSLMRLRKPILMSSTUCFKSUKMGGUQIVREELWTSRTHFLUUHQMLEAVUSRKEAVAUDLTLTMMRRTAVITESRAWUPRSUNNTLGQSSUIGLMKULFSGNSLNWRLRRURIUCURRCSRDUKPKRLNSQUQRDLGREWSTKVIILVMGPGLUDEPUCDFWRTAWLKRCLLGRLKRATLLUWMLILMETULCSTVVLVLQIHCQMLFLC