Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79506.t1 | XP_024637160.1 | 97.8 | 459 | 9 | 1 | 1 | 458 | 1 | 459 | 1.20E-254 | 888.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79506.t1 | Q9FMF5 | 31.6 | 547 | 259 | 11 | 12 | 458 | 215 | 746 | 3.7e-63 | 243.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79506.t1 | A0A072UH38 | 97.8 | 448 | 9 | 1 | 1 | 447 | 1 | 448 | 4.6e-248 | 866.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene79506 | 0.805243 | 1.47E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene79506 | 0.825488 | 4.56E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene79506 | 0.841865 | 3.67E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene79506 | 0.800461 | 1.43E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene79506 | 0.825882 | 3.68E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene79506 | 0.808563 | 2.91E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene79506 | 0.837073 | 6.45E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene79506 | 0.833795 | 4.34E-56 | -1.69E-46 |
| MS.gene049681 | MS.gene79506 | 0.809091 | 2.25E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene79506 | 0.805341 | 1.40E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene79506 | 0.830563 | 2.74E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene79506 | 0.882874 | 7.22E-71 | -1.69E-46 |
| MS.gene050397 | MS.gene79506 | 0.822329 | 2.51E-53 | -1.69E-46 |
| MS.gene050404 | MS.gene79506 | 0.829577 | 4.76E-55 | -1.69E-46 |
| MS.gene050406 | MS.gene79506 | 0.846429 | 2.18E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene79506 | 0.84168 | 4.10E-58 | -1.69E-46 |
| MS.gene050464 | MS.gene79506 | 0.807108 | 5.94E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene79506 | 0.832935 | 7.11E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene79506 | 0.834404 | 3.06E-56 | -1.69E-46 |
| MS.gene050783 | MS.gene79506 | 0.834327 | 3.20E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene79506 | 0.850505 | 1.63E-60 | -1.69E-46 |
| MS.gene05101 | MS.gene79506 | 0.856906 | 2.34E-62 | -1.69E-46 |
| MS.gene05105 | MS.gene79506 | 0.832014 | 1.20E-55 | -1.69E-46 |
| MS.gene051171 | MS.gene79506 | 0.849813 | 2.54E-60 | -1.69E-46 |
| MS.gene051242 | MS.gene79506 | 0.818003 | 2.46E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene79506 | 0.801856 | 7.39E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene79506 | 0.838423 | 2.90E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene79506 | 0.811678 | 6.21E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene79506 | 0.8585 | 7.89E-63 | -1.69E-46 |
| MS.gene051666 | MS.gene79506 | 0.800608 | 1.33E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene79506 | 0.803605 | 3.22E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene79506 | -0.829171 | 5.98E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene79506 | 0.861808 | 7.91E-64 | -1.69E-46 |
| MS.gene052178 | MS.gene79506 | 0.811349 | 7.32E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene79506 | 0.859978 | 2.84E-63 | -1.69E-46 |
| MS.gene052253 | MS.gene79506 | 0.867521 | 1.29E-65 | -1.69E-46 |
| MS.gene052310 | MS.gene79506 | 0.878417 | 2.86E-69 | -1.69E-46 |
| MS.gene052322 | MS.gene79506 | 0.85259 | 4.18E-61 | -1.69E-46 |
| MS.gene052326 | MS.gene79506 | 0.82546 | 4.63E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene79506 | 0.877323 | 6.89E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene79506 | 0.816098 | 6.59E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene79506 | 0.836534 | 8.85E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene79506 | 0.847587 | 1.05E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene79506 | 0.820473 | 6.73E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene79506 | 0.84626 | 2.43E-59 | -1.69E-46 |
| MS.gene053330 | MS.gene79506 | 0.818619 | 1.78E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene79506 | 0.822597 | 2.18E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene79506 | 0.854988 | 8.53E-62 | -1.69E-46 |
| MS.gene053928 | MS.gene79506 | 0.848158 | 7.32E-60 | -1.69E-46 |
| MS.gene053971 | MS.gene79506 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene79506 | 0.801829 | 7.49E-49 | -1.69E-46 |
| MS.gene054012 | MS.gene79506 | 0.802178 | 6.35E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene79506 | 0.848948 | 4.43E-60 | -1.69E-46 |
| MS.gene054183 | MS.gene79506 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene79506 | 0.809365 | 1.96E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene79506 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene79506 | 0.810932 | 9.01E-51 | -1.69E-46 |
| MS.gene054719 | MS.gene79506 | 0.811954 | 5.41E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene79506 | 0.814727 | 1.33E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene79506 | 0.865606 | 5.23E-65 | -1.69E-46 |
| MS.gene055277 | MS.gene79506 | 0.851431 | 8.91E-61 | -1.69E-46 |
| MS.gene055390 | MS.gene79506 | 0.807893 | 4.05E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene79506 | 0.833603 | 4.85E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene79506 | 0.845453 | 4.02E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene79506 | 0.881773 | 1.82E-70 | -1.69E-46 |
| MS.gene055539 | MS.gene79506 | 0.802635 | 5.11E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene79506 | 0.855328 | 6.79E-62 | -1.69E-46 |
| MS.gene055604 | MS.gene79506 | 0.831374 | 1.73E-55 | -1.69E-46 |
| MS.gene055712 | MS.gene79506 | 0.80411 | 2.53E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene79506 | 0.820583 | 6.35E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene79506 | 0.857193 | 1.93E-62 | -1.69E-46 |
| MS.gene056497 | MS.gene79506 | 0.806644 | 7.44E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene79506 | 0.810269 | 1.25E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene79506 | 0.842632 | 2.30E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene79506 | 0.84554 | 3.81E-59 | -1.69E-46 |
| MS.gene056664 | MS.gene79506 | 0.813935 | 1.99E-51 | -1.69E-46 |
| MS.gene056723 | MS.gene79506 | 0.804641 | 1.96E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene79506 | 0.843712 | 1.18E-58 | -1.69E-46 |
| MS.gene056899 | MS.gene79506 | -0.802568 | 5.27E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene79506 | 0.809088 | 2.25E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene79506 | 0.889462 | 2.37E-73 | -1.69E-46 |
| MS.gene057121 | MS.gene79506 | 0.829553 | 4.83E-55 | -1.69E-46 |
| MS.gene057123 | MS.gene79506 | 0.80938 | 1.95E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene79506 | 0.832502 | 9.11E-56 | -1.69E-46 |
| MS.gene057196 | MS.gene79506 | 0.80708 | 6.02E-50 | -1.69E-46 |
| MS.gene057245 | MS.gene79506 | 0.80869 | 2.74E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene79506 | 0.820682 | 6.03E-53 | -1.69E-46 |
| MS.gene05733 | MS.gene79506 | 0.866812 | 2.17E-65 | -1.69E-46 |
| MS.gene057396 | MS.gene79506 | 0.815605 | 8.49E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene79506 | 0.876686 | 1.15E-68 | -1.69E-46 |
| MS.gene057823 | MS.gene79506 | 0.865457 | 5.82E-65 | -1.69E-46 |
| MS.gene057825 | MS.gene79506 | 0.842389 | 2.66E-58 | -1.69E-46 |
| MS.gene058002 | MS.gene79506 | 0.877488 | 6.04E-69 | -1.69E-46 |
| MS.gene05811 | MS.gene79506 | 0.841693 | 4.07E-58 | -1.69E-46 |
| MS.gene058142 | MS.gene79506 | 0.861839 | 7.74E-64 | -1.69E-46 |
| MS.gene058233 | MS.gene79506 | 0.86954 | 2.87E-66 | -1.69E-46 |
| MS.gene058276 | MS.gene79506 | 0.857785 | 1.29E-62 | -1.69E-46 |
| MS.gene058293 | MS.gene79506 | 0.846397 | 2.23E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene79506 | 0.874175 | 8.29E-68 | -1.69E-46 |
| MS.gene058660 | MS.gene79506 | 0.86364 | 2.15E-64 | -1.69E-46 |
| MS.gene058710 | MS.gene79506 | 0.828953 | 6.75E-55 | -1.69E-46 |
| MS.gene058746 | MS.gene79506 | 0.815276 | 1.00E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene79506 | 0.814992 | 1.16E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene79506 | 0.846107 | 2.67E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene79506 | 0.827088 | 1.90E-54 | -1.69E-46 |
| MS.gene058949 | MS.gene79506 | 0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene79506 | 0.832048 | 1.18E-55 | -1.69E-46 |
| MS.gene059011 | MS.gene79506 | 0.826887 | 2.12E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene79506 | 0.864401 | 1.25E-64 | -1.69E-46 |
| MS.gene059141 | MS.gene79506 | 0.839081 | 1.96E-57 | -1.69E-46 |
| MS.gene059285 | MS.gene79506 | 0.816754 | 4.70E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene79506 | 0.836539 | 8.82E-57 | -1.69E-46 |
| MS.gene059518 | MS.gene79506 | 0.82912 | 6.15E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene79506 | 0.874494 | 6.46E-68 | -1.69E-46 |
| MS.gene059676 | MS.gene79506 | 0.848546 | 5.72E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene79506 | 0.854639 | 1.08E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene79506 | 0.873028 | 2.02E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene79506 | 0.875873 | 2.19E-68 | -1.69E-46 |
| MS.gene05984 | MS.gene79506 | 0.84417 | 8.92E-59 | -1.69E-46 |
| MS.gene059894 | MS.gene79506 | 0.872977 | 2.10E-67 | -1.69E-46 |
| MS.gene059960 | MS.gene79506 | 0.803667 | 3.13E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene79506 | 0.834734 | 2.53E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene79506 | 0.845862 | 3.12E-59 | -1.69E-46 |
| MS.gene060407 | MS.gene79506 | 0.886631 | 2.89E-72 | -1.69E-46 |
| MS.gene06090 | MS.gene79506 | 0.80727 | 5.49E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene79506 | 0.880992 | 3.47E-70 | -1.69E-46 |
| MS.gene061051 | MS.gene79506 | -0.827784 | 1.29E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene79506 | 0.818308 | 2.10E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79506.t1 | MTR_4g011530 | 97.768 | 448 | 9 | 1 | 1 | 447 | 1 | 448 | 0.0 | 909 |
| MS.gene79506.t1 | MTR_2g102730 | 70.159 | 439 | 113 | 8 | 22 | 458 | 1 | 423 | 0.0 | 573 |
| MS.gene79506.t1 | MTR_2g009340 | 35.084 | 419 | 215 | 6 | 27 | 391 | 214 | 629 | 2.91e-78 | 257 |
| MS.gene79506.t1 | MTR_4g093850 | 37.065 | 402 | 193 | 8 | 44 | 391 | 228 | 623 | 9.16e-78 | 255 |
| MS.gene79506.t1 | MTR_4g022330 | 36.386 | 415 | 215 | 10 | 46 | 426 | 211 | 610 | 1.94e-67 | 227 |
| MS.gene79506.t1 | MTR_5g032780 | 37.864 | 309 | 151 | 4 | 46 | 313 | 211 | 519 | 3.29e-65 | 221 |
| MS.gene79506.t1 | MTR_8g078900 | 34.794 | 388 | 208 | 7 | 42 | 387 | 183 | 567 | 1.04e-63 | 217 |
| MS.gene79506.t1 | MTR_8g078900 | 34.794 | 388 | 208 | 7 | 42 | 387 | 193 | 577 | 1.24e-63 | 217 |
| MS.gene79506.t1 | MTR_8g078900 | 34.794 | 388 | 208 | 7 | 42 | 387 | 223 | 607 | 2.14e-63 | 217 |
| MS.gene79506.t1 | MTR_2g018750 | 32.258 | 403 | 239 | 9 | 21 | 402 | 187 | 576 | 2.78e-63 | 215 |
| MS.gene79506.t1 | MTR_8g090220 | 36.860 | 293 | 150 | 5 | 46 | 306 | 215 | 504 | 5.86e-63 | 213 |
| MS.gene79506.t1 | MTR_1g088885 | 34.243 | 403 | 217 | 12 | 33 | 402 | 201 | 588 | 2.63e-62 | 213 |
| MS.gene79506.t1 | MTR_8g090220 | 36.700 | 297 | 153 | 5 | 46 | 310 | 215 | 508 | 2.82e-62 | 213 |
| MS.gene79506.t1 | MTR_7g073980 | 34.588 | 425 | 232 | 11 | 44 | 437 | 203 | 612 | 2.03e-61 | 211 |
| MS.gene79506.t1 | MTR_7g108290 | 34.250 | 400 | 219 | 10 | 33 | 401 | 204 | 590 | 2.72e-61 | 211 |
| MS.gene79506.t1 | MTR_1g064360 | 35.599 | 309 | 176 | 3 | 28 | 314 | 173 | 480 | 5.25e-60 | 206 |
| MS.gene79506.t1 | MTR_5g016060 | 39.007 | 282 | 153 | 4 | 46 | 314 | 105 | 380 | 1.59e-58 | 201 |
| MS.gene79506.t1 | MTR_1g094850 | 33.156 | 377 | 220 | 6 | 46 | 402 | 212 | 576 | 7.15e-58 | 201 |
| MS.gene79506.t1 | MTR_5g016060 | 39.007 | 282 | 153 | 4 | 46 | 314 | 219 | 494 | 1.56e-57 | 200 |
| MS.gene79506.t1 | MTR_1g106430 | 33.099 | 426 | 238 | 11 | 40 | 433 | 207 | 617 | 3.74e-57 | 199 |
| MS.gene79506.t1 | MTR_5g015790 | 33.484 | 442 | 235 | 11 | 46 | 455 | 212 | 626 | 4.10e-56 | 197 |
| MS.gene79506.t1 | MTR_4g095430 | 35.411 | 353 | 195 | 8 | 46 | 387 | 195 | 525 | 2.55e-54 | 191 |
| MS.gene79506.t1 | MTR_2g084595 | 36.519 | 293 | 161 | 4 | 43 | 314 | 209 | 497 | 4.85e-54 | 191 |
| MS.gene79506.t1 | MTR_1g014070 | 39.931 | 288 | 139 | 8 | 46 | 312 | 213 | 487 | 5.38e-54 | 191 |
| MS.gene79506.t1 | MTR_1g082690 | 30.484 | 351 | 207 | 10 | 33 | 376 | 208 | 528 | 4.78e-50 | 179 |
| MS.gene79506.t1 | MTR_4g134210 | 36.207 | 290 | 168 | 5 | 46 | 323 | 201 | 485 | 9.84e-50 | 179 |
| MS.gene79506.t1 | MTR_4g093850 | 36.027 | 297 | 136 | 5 | 21 | 272 | 213 | 500 | 2.03e-49 | 176 |
| MS.gene79506.t1 | MTR_8g069330 | 34.323 | 303 | 147 | 5 | 46 | 313 | 199 | 484 | 1.73e-48 | 175 |
| MS.gene79506.t1 | MTR_3g062540 | 33.221 | 298 | 179 | 4 | 30 | 314 | 129 | 419 | 3.98e-48 | 173 |
| MS.gene79506.t1 | MTR_3g062540 | 33.221 | 298 | 179 | 4 | 30 | 314 | 171 | 461 | 6.65e-48 | 173 |
| MS.gene79506.t1 | MTR_5g075640 | 31.579 | 304 | 185 | 5 | 30 | 314 | 129 | 428 | 3.48e-41 | 154 |
| MS.gene79506.t1 | MTR_5g075640 | 31.579 | 304 | 185 | 5 | 30 | 314 | 172 | 471 | 5.31e-41 | 154 |
| MS.gene79506.t1 | MTR_2g048390 | 33.740 | 246 | 142 | 2 | 38 | 262 | 207 | 452 | 1.99e-39 | 148 |
| MS.gene79506.t1 | MTR_2g027410 | 34.629 | 283 | 152 | 6 | 46 | 313 | 129 | 393 | 2.02e-38 | 146 |
| MS.gene79506.t1 | MTR_2g027410 | 34.629 | 283 | 152 | 6 | 46 | 313 | 201 | 465 | 2.90e-38 | 146 |
| MS.gene79506.t1 | MTR_8g078900 | 34.568 | 243 | 135 | 4 | 42 | 262 | 183 | 423 | 9.99e-36 | 137 |
| MS.gene79506.t1 | MTR_2g084595 | 34.025 | 241 | 134 | 4 | 43 | 262 | 209 | 445 | 1.11e-35 | 137 |
| MS.gene79506.t1 | MTR_8g078900 | 34.568 | 243 | 135 | 4 | 42 | 262 | 223 | 463 | 1.78e-35 | 137 |
| MS.gene79506.t1 | MTR_4g045767 | 30.769 | 286 | 186 | 4 | 126 | 401 | 257 | 540 | 4.07e-33 | 132 |
| MS.gene79506.t1 | MTR_4g074190 | 32.364 | 275 | 173 | 4 | 46 | 319 | 164 | 426 | 4.32e-33 | 131 |
| MS.gene79506.t1 | MTR_4g074190 | 32.364 | 275 | 173 | 4 | 46 | 319 | 210 | 472 | 5.81e-33 | 131 |
| MS.gene79506.t1 | MTR_1g035720 | 28.779 | 344 | 213 | 10 | 46 | 387 | 210 | 523 | 1.17e-31 | 127 |
| MS.gene79506.t1 | MTR_4g134160 | 50.292 | 171 | 48 | 9 | 270 | 434 | 26 | 165 | 1.34e-29 | 114 |
| MS.gene79506.t1 | MTR_4g074190 | 30.909 | 220 | 139 | 4 | 46 | 264 | 210 | 417 | 7.95e-21 | 95.1 |
| MS.gene79506.t1 | MTR_2g010890 | 26.354 | 277 | 186 | 6 | 39 | 314 | 114 | 373 | 2.05e-18 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79506.t1 | AT1G52770 | 58.621 | 464 | 155 | 10 | 22 | 458 | 1 | 454 | 0.0 | 517 |
| MS.gene79506.t1 | AT3G15570 | 59.913 | 459 | 155 | 10 | 22 | 458 | 1 | 452 | 7.89e-180 | 511 |
| MS.gene79506.t1 | AT5G03250 | 35.620 | 379 | 197 | 9 | 46 | 401 | 107 | 461 | 2.89e-66 | 220 |
| MS.gene79506.t1 | AT5G03250 | 35.620 | 379 | 197 | 9 | 46 | 401 | 219 | 573 | 5.01e-65 | 220 |
| MS.gene79506.t1 | AT5G64330 | 40.317 | 315 | 148 | 5 | 112 | 386 | 373 | 687 | 1.16e-64 | 222 |
| MS.gene79506.t1 | AT5G64330 | 44.444 | 63 | 30 | 1 | 32 | 94 | 243 | 300 | 1.21e-11 | 67.4 |
| MS.gene79506.t1 | AT1G30440 | 33.248 | 391 | 221 | 5 | 38 | 393 | 208 | 593 | 6.99e-63 | 216 |
| MS.gene79506.t1 | AT5G64330 | 42.361 | 288 | 130 | 4 | 112 | 363 | 314 | 601 | 8.28e-63 | 214 |
| MS.gene79506.t1 | AT5G64330 | 44.444 | 63 | 30 | 1 | 32 | 94 | 184 | 241 | 1.01e-11 | 67.4 |
| MS.gene79506.t1 | AT5G48800 | 35.897 | 390 | 192 | 8 | 46 | 406 | 221 | 581 | 1.03e-62 | 214 |
| MS.gene79506.t1 | AT5G64330 | 42.361 | 288 | 130 | 4 | 112 | 363 | 373 | 660 | 2.58e-62 | 214 |
| MS.gene79506.t1 | AT5G64330 | 44.444 | 63 | 30 | 1 | 32 | 94 | 243 | 300 | 1.21e-11 | 67.4 |
| MS.gene79506.t1 | AT5G13600 | 33.656 | 413 | 230 | 11 | 12 | 402 | 176 | 566 | 1.51e-61 | 211 |
| MS.gene79506.t1 | AT5G66560 | 35.938 | 384 | 195 | 10 | 36 | 381 | 206 | 576 | 1.07e-60 | 209 |
| MS.gene79506.t1 | AT5G66560 | 35.938 | 384 | 195 | 10 | 36 | 381 | 216 | 586 | 1.15e-60 | 209 |
| MS.gene79506.t1 | AT5G66560 | 35.938 | 384 | 195 | 10 | 36 | 381 | 245 | 615 | 1.62e-60 | 209 |
| MS.gene79506.t1 | AT2G47860 | 39.394 | 297 | 143 | 5 | 46 | 314 | 90 | 377 | 5.69e-59 | 202 |
| MS.gene79506.t1 | AT2G47860 | 39.394 | 297 | 143 | 5 | 46 | 314 | 90 | 377 | 5.69e-59 | 202 |
| MS.gene79506.t1 | AT2G47860 | 39.394 | 297 | 143 | 5 | 46 | 314 | 208 | 495 | 5.79e-58 | 202 |
| MS.gene79506.t1 | AT2G47860 | 39.394 | 297 | 143 | 5 | 46 | 314 | 231 | 518 | 6.48e-58 | 202 |
| MS.gene79506.t1 | AT3G08660 | 33.421 | 380 | 209 | 8 | 44 | 403 | 136 | 491 | 2.36e-57 | 197 |
| MS.gene79506.t1 | AT5G67385 | 37.716 | 289 | 163 | 5 | 46 | 324 | 158 | 439 | 4.30e-57 | 198 |
| MS.gene79506.t1 | AT5G67385 | 37.716 | 289 | 163 | 5 | 46 | 324 | 158 | 439 | 4.30e-57 | 198 |
| MS.gene79506.t1 | AT5G67385 | 37.716 | 289 | 163 | 5 | 46 | 324 | 158 | 439 | 4.30e-57 | 198 |
| MS.gene79506.t1 | AT5G67385 | 37.716 | 289 | 163 | 5 | 46 | 324 | 158 | 439 | 4.30e-57 | 198 |
| MS.gene79506.t1 | AT3G08660 | 33.421 | 380 | 209 | 8 | 44 | 403 | 196 | 551 | 5.76e-57 | 198 |
| MS.gene79506.t1 | AT5G67385 | 37.716 | 289 | 163 | 5 | 46 | 324 | 203 | 484 | 9.81e-57 | 198 |
| MS.gene79506.t1 | AT1G03010 | 36.422 | 313 | 164 | 6 | 32 | 314 | 170 | 477 | 4.67e-56 | 196 |
| MS.gene79506.t1 | AT1G03010 | 36.422 | 313 | 164 | 6 | 32 | 314 | 197 | 504 | 8.43e-56 | 196 |
| MS.gene79506.t1 | AT1G03010 | 36.422 | 313 | 164 | 6 | 32 | 314 | 196 | 503 | 1.02e-55 | 196 |
| MS.gene79506.t1 | AT3G26490 | 36.278 | 317 | 146 | 6 | 46 | 322 | 220 | 520 | 5.87e-53 | 187 |
| MS.gene79506.t1 | AT3G26490 | 36.278 | 317 | 146 | 6 | 46 | 322 | 220 | 520 | 5.87e-53 | 187 |
| MS.gene79506.t1 | AT3G26490 | 36.278 | 317 | 146 | 6 | 46 | 322 | 220 | 520 | 5.87e-53 | 187 |
| MS.gene79506.t1 | AT3G44820 | 36.093 | 302 | 162 | 4 | 43 | 314 | 210 | 510 | 9.70e-53 | 188 |
| MS.gene79506.t1 | AT2G30520 | 36.519 | 293 | 167 | 5 | 36 | 314 | 135 | 422 | 1.10e-52 | 186 |
| MS.gene79506.t1 | AT2G30520 | 36.519 | 293 | 167 | 5 | 36 | 314 | 135 | 422 | 1.10e-52 | 186 |
| MS.gene79506.t1 | AT2G30520 | 36.519 | 293 | 167 | 5 | 36 | 314 | 183 | 470 | 1.44e-52 | 186 |
| MS.gene79506.t1 | AT5G10250 | 30.051 | 396 | 234 | 8 | 35 | 401 | 202 | 583 | 3.78e-52 | 186 |
| MS.gene79506.t1 | AT1G67900 | 37.013 | 308 | 154 | 5 | 46 | 313 | 202 | 509 | 4.61e-52 | 186 |
| MS.gene79506.t1 | AT1G67900 | 37.013 | 308 | 154 | 5 | 46 | 313 | 202 | 509 | 4.61e-52 | 186 |
| MS.gene79506.t1 | AT1G67900 | 37.013 | 308 | 154 | 5 | 46 | 313 | 202 | 509 | 4.61e-52 | 186 |
| MS.gene79506.t1 | AT1G67900 | 37.013 | 308 | 154 | 5 | 46 | 313 | 202 | 509 | 4.61e-52 | 186 |
| MS.gene79506.t1 | AT1G67900 | 37.013 | 308 | 154 | 5 | 46 | 313 | 202 | 509 | 4.61e-52 | 186 |
| MS.gene79506.t1 | AT1G67900 | 37.013 | 308 | 154 | 5 | 46 | 313 | 202 | 509 | 4.61e-52 | 186 |
| MS.gene79506.t1 | AT4G31820 | 37.374 | 297 | 142 | 8 | 32 | 315 | 152 | 417 | 7.59e-52 | 183 |
| MS.gene79506.t1 | AT2G14820 | 33.714 | 350 | 194 | 6 | 46 | 367 | 209 | 548 | 8.31e-52 | 185 |
| MS.gene79506.t1 | AT2G14820 | 33.714 | 350 | 194 | 6 | 46 | 367 | 209 | 548 | 8.31e-52 | 185 |
| MS.gene79506.t1 | AT4G31820 | 37.374 | 297 | 142 | 8 | 32 | 315 | 205 | 470 | 2.08e-51 | 183 |
| MS.gene79506.t1 | AT4G37590 | 34.731 | 334 | 192 | 7 | 36 | 367 | 206 | 515 | 3.37e-51 | 182 |
| MS.gene79506.t1 | AT5G10250 | 30.052 | 386 | 232 | 8 | 35 | 401 | 202 | 568 | 5.01e-51 | 182 |
| MS.gene79506.t1 | AT3G50840 | 33.509 | 379 | 220 | 10 | 36 | 402 | 150 | 508 | 3.73e-50 | 179 |
| MS.gene79506.t1 | AT3G50840 | 33.509 | 379 | 220 | 10 | 36 | 402 | 150 | 508 | 3.73e-50 | 179 |
| MS.gene79506.t1 | AT3G08570 | 31.980 | 394 | 228 | 11 | 42 | 409 | 208 | 587 | 5.00e-50 | 180 |
| MS.gene79506.t1 | AT3G50840 | 33.509 | 379 | 220 | 10 | 36 | 402 | 186 | 544 | 8.10e-50 | 178 |
| MS.gene79506.t1 | AT2G23050 | 35.055 | 271 | 148 | 5 | 46 | 315 | 93 | 336 | 1.35e-47 | 168 |
| MS.gene79506.t1 | AT2G23050 | 34.686 | 271 | 149 | 4 | 46 | 315 | 209 | 452 | 1.32e-46 | 168 |
| MS.gene79506.t1 | AT5G47800 | 34.420 | 276 | 169 | 3 | 46 | 311 | 201 | 474 | 2.97e-45 | 166 |
| MS.gene79506.t1 | AT5G47800 | 34.420 | 276 | 169 | 3 | 46 | 311 | 201 | 474 | 2.97e-45 | 166 |
| MS.gene79506.t1 | AT5G47800 | 34.420 | 276 | 169 | 3 | 46 | 311 | 201 | 474 | 2.97e-45 | 166 |
| MS.gene79506.t1 | AT5G47800 | 34.420 | 276 | 169 | 3 | 46 | 311 | 314 | 587 | 1.10e-44 | 166 |
| MS.gene79506.t1 | AT3G49970 | 33.788 | 293 | 163 | 7 | 46 | 318 | 151 | 432 | 5.14e-44 | 162 |
| MS.gene79506.t1 | AT3G49970 | 33.788 | 293 | 163 | 7 | 46 | 318 | 151 | 432 | 5.14e-44 | 162 |
| MS.gene79506.t1 | AT5G67440 | 35.379 | 277 | 163 | 5 | 46 | 313 | 170 | 439 | 5.20e-44 | 162 |
| MS.gene79506.t1 | AT5G67440 | 35.379 | 277 | 163 | 5 | 46 | 313 | 207 | 476 | 1.18e-43 | 162 |
| MS.gene79506.t1 | AT5G67440 | 35.379 | 277 | 163 | 5 | 46 | 313 | 207 | 476 | 1.18e-43 | 162 |
| MS.gene79506.t1 | AT2G47860 | 36.327 | 245 | 119 | 5 | 46 | 262 | 231 | 466 | 6.21e-36 | 138 |
| MS.gene79506.t1 | AT2G47860 | 36.327 | 245 | 119 | 5 | 46 | 262 | 208 | 443 | 6.58e-36 | 138 |
| MS.gene79506.t1 | AT5G66560 | 36.667 | 240 | 134 | 6 | 36 | 262 | 245 | 479 | 4.16e-34 | 134 |
| MS.gene79506.t1 | AT3G19850 | 31.868 | 273 | 169 | 4 | 42 | 311 | 205 | 463 | 4.15e-33 | 132 |
| MS.gene79506.t1 | AT3G26490 | 33.465 | 254 | 117 | 5 | 46 | 263 | 220 | 457 | 7.12e-32 | 127 |
| MS.gene79506.t1 | AT3G08660 | 32.922 | 243 | 132 | 6 | 44 | 270 | 196 | 423 | 1.64e-31 | 125 |
| MS.gene79506.t1 | AT3G03510 | 33.333 | 246 | 144 | 7 | 73 | 314 | 133 | 362 | 3.98e-28 | 116 |
| MS.gene79506.t1 | AT3G22104 | 35.979 | 189 | 115 | 3 | 111 | 298 | 162 | 345 | 1.22e-27 | 114 |
| MS.gene79506.t1 | AT3G22104 | 35.979 | 189 | 115 | 3 | 111 | 298 | 162 | 345 | 1.22e-27 | 114 |
| MS.gene79506.t1 | AT3G22104 | 35.979 | 189 | 115 | 3 | 111 | 298 | 162 | 345 | 1.22e-27 | 114 |
| MS.gene79506.t1 | AT3G22104 | 35.567 | 194 | 119 | 3 | 106 | 298 | 232 | 420 | 1.89e-27 | 115 |
| MS.gene79506.t1 | AT5G17580 | 30.116 | 259 | 161 | 4 | 62 | 314 | 214 | 458 | 2.38e-26 | 112 |
| MS.gene79506.t1 | AT5G17580 | 30.116 | 259 | 161 | 4 | 62 | 314 | 199 | 443 | 3.73e-26 | 111 |
| MS.gene79506.t1 | AT1G50280 | 28.881 | 277 | 176 | 4 | 42 | 309 | 198 | 462 | 7.49e-26 | 110 |
| MS.gene79506.t1 | AT1G50280 | 28.041 | 296 | 192 | 4 | 23 | 309 | 146 | 429 | 8.30e-26 | 110 |
| MS.gene79506.t1 | AT5G48130 | 25.073 | 343 | 199 | 11 | 18 | 338 | 196 | 502 | 2.34e-21 | 97.4 |
Find 92 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTGTGAAAACACTTTC+TGG | 0.134013 | 4.2:-88813578 | MS.gene79506:CDS |
| GAGAAGTTTGATGGTGATTT+TGG | 0.203132 | 4.2:+88813644 | None:intergenic |
| TGTTAAGAGGTTTGTTAGTT+TGG | 0.247451 | 4.2:-88813171 | MS.gene79506:CDS |
| TCACACTTGTGGGACTCTTT+TGG | 0.252553 | 4.2:-88813216 | MS.gene79506:CDS |
| GATGAGTTTGTTACTCTTGC+TGG | 0.253315 | 4.2:-88813050 | MS.gene79506:CDS |
| ACTTCTTGTGATGCTCATTA+TGG | 0.274016 | 4.2:+88811830 | None:intergenic |
| ATAGATTTCCTCCACCTATT+AGG | 0.281581 | 4.2:+88811465 | None:intergenic |
| CTTTCTTGCTTTGATACACT+TGG | 0.322090 | 4.2:+88812020 | None:intergenic |
| GGTGTTCGAGCCGACTTAAT+CGG | 0.338282 | 4.2:-88813542 | MS.gene79506:CDS |
| CATGGAATTGAATCTTTCTC+TGG | 0.346759 | 4.2:+88813374 | None:intergenic |
| AGAAGAGGAGAAGGTGTTGA+TGG | 0.353384 | 4.2:-88811570 | MS.gene79506:CDS |
| GATGGAGATGAAGTTGAGTT+TGG | 0.358964 | 4.2:-88811552 | MS.gene79506:CDS |
| AGAAGTCCAACAAATGGATT+TGG | 0.363197 | 4.2:-88811813 | MS.gene79506:CDS |
| ACTTGTATTACTGCTCTTAC+CGG | 0.366047 | 4.2:+88811918 | None:intergenic |
| AGCACAAAACGAACGATTCC+CGG | 0.370478 | 4.2:-88811937 | MS.gene79506:CDS |
| AGGTTTGGTGTGCATGGTTT+TGG | 0.374755 | 4.2:-88811615 | MS.gene79506:CDS |
| TCTAGTCCAAATCCATTTGT+TGG | 0.382148 | 4.2:+88811807 | None:intergenic |
| TTATTTGTTCTGTGTTGGTT+TGG | 0.393593 | 4.2:+88813675 | None:intergenic |
| TGCTAAAAGTGGTGCTGCTT+TGG | 0.397041 | 4.2:-88813138 | MS.gene79506:CDS |
| AAGTGGTGCTGCTTTGGTTA+AGG | 0.398353 | 4.2:-88813132 | MS.gene79506:CDS |
| TGGTAAAGGAGAGAGTGTTA+TGG | 0.398752 | 4.2:-88811595 | MS.gene79506:CDS |
| AAATAATGTAGTGGAACAAT+TGG | 0.399223 | 4.2:+88813721 | None:intergenic |
| CATTCTGAGGAGAAGTTTGA+TGG | 0.400975 | 4.2:+88813635 | None:intergenic |
| GCCAACATGGTTGGTGTTGA+TGG | 0.404173 | 4.2:-88813323 | MS.gene79506:CDS |
| TCAAAGGTAGGACTCCTAAT+AGG | 0.421712 | 4.2:-88811479 | MS.gene79506:CDS |
| AATATTTATTTGTTCTGTGT+TGG | 0.432251 | 4.2:+88813670 | None:intergenic |
| AGAATGGTTGAGAAGAAGAA+AGG | 0.437986 | 4.2:-88811657 | MS.gene79506:CDS |
| TATGCAGACTAATAGATTGC+AGG | 0.439967 | 4.2:-88811989 | MS.gene79506:CDS |
| CATGATGTTGTTACACTCTC+AGG | 0.440841 | 4.2:+88813443 | None:intergenic |
| TTCCATGTAACTTTCTCCTT+AGG | 0.442375 | 4.2:-88813358 | MS.gene79506:CDS |
| CTGCTGTTGATGCTAATTTG+AGG | 0.442702 | 4.2:-88813076 | MS.gene79506:CDS |
| TTTGGTTAAGGTTGCTAAGT+TGG | 0.446507 | 4.2:-88813120 | MS.gene79506:CDS |
| GAATGGTTGAGAAGAAGAAA+GGG | 0.448107 | 4.2:-88811656 | MS.gene79506:CDS |
| GCTCCCTGACGTAGCCGAAA+AGG | 0.449136 | 4.2:-88813489 | MS.gene79506:CDS |
| CAACATCATGGATGAAGAAA+AGG | 0.449234 | 4.2:-88813430 | MS.gene79506:CDS |
| GGCTACGTCAGGGAGCCATT+TGG | 0.450333 | 4.2:+88813496 | None:intergenic |
| TTTGTTAGTTTGGATAATGA+AGG | 0.466879 | 4.2:-88813161 | MS.gene79506:CDS |
| TTTAAGTGGAGTAAGAGGTT+TGG | 0.480562 | 4.2:-88811630 | MS.gene79506:CDS |
| AGCTAGAGAAGAGAATTTCA+TGG | 0.481388 | 4.2:-88813286 | MS.gene79506:CDS |
| CTCCCTGACGTAGCCGAAAA+GGG | 0.489441 | 4.2:-88813488 | MS.gene79506:CDS |
| AGTAAGAGGTTTGGTGTGCA+TGG | 0.489469 | 4.2:-88811621 | MS.gene79506:CDS |
| AGATAGAGATAAAGAAGCTA+AGG | 0.489951 | 4.2:-88811734 | MS.gene79506:CDS |
| CTACTTCTGATATGAAAACT+AGG | 0.495642 | 4.2:-88811512 | MS.gene79506:CDS |
| TTGTTATTAGGCTTGTTAAG+AGG | 0.498185 | 4.2:-88813184 | MS.gene79506:CDS |
| ATATCAATCACAACATGGAT+TGG | 0.500377 | 4.2:-88811860 | MS.gene79506:CDS |
| CAATGCAATGCAAGTTCAGA+TGG | 0.501974 | 4.2:-88811682 | MS.gene79506:CDS |
| AGCTAAGGGAAGATGTTCAT+AGG | 0.502264 | 4.2:-88811719 | MS.gene79506:CDS |
| TTCATATCAGAAGTAGTAGC+AGG | 0.504839 | 4.2:+88811519 | None:intergenic |
| GCAAGTTCAGATGGAGAGAA+TGG | 0.512626 | 4.2:-88811673 | MS.gene79506:CDS |
| CTTTCTGGAATCAAAGCAAA+AGG | 0.519347 | 4.2:-88813563 | MS.gene79506:CDS |
| GCTTTGTTTGCTCTGAGAGA+AGG | 0.520683 | 4.2:+88811895 | None:intergenic |
| TTCTGATATGAAAACTAGGT+TGG | 0.521166 | 4.2:-88811508 | MS.gene79506:CDS |
| TGGTGGTAGAACATTAACTA+AGG | 0.523325 | 4.2:+88813394 | None:intergenic |
| TGTATCAAAGCAAGAAAGGA+AGG | 0.526676 | 4.2:-88812015 | MS.gene79506:CDS |
| ATCACAAGAAGTCCAACAAA+TGG | 0.526697 | 4.2:-88811819 | MS.gene79506:CDS |
| CAAGTGTATCAAAGCAAGAA+AGG | 0.527406 | 4.2:-88812019 | MS.gene79506:CDS |
| CATGCTAGAGCTACTGATGA+TGG | 0.529678 | 4.2:-88813014 | MS.gene79506:CDS |
| TGTTGATGCTAATTTGAGGT+TGG | 0.530669 | 4.2:-88813072 | MS.gene79506:CDS |
| GTTATGGAGAGAAGAGGAGA+AGG | 0.531293 | 4.2:-88811579 | MS.gene79506:CDS |
| TTTGATAAACATCGTGCCGT+TGG | 0.533299 | 4.2:+88811777 | None:intergenic |
| CAAACTTCTCCTCAGAATGC+TGG | 0.537316 | 4.2:-88813631 | MS.gene79506:CDS |
| TCACAAAGTAGTCCATGTCT+AGG | 0.539545 | 4.2:+88813591 | None:intergenic |
| GGAGGCATAGTGTGTGATGA+TGG | 0.542827 | 4.2:+88813517 | None:intergenic |
| TCAGTAGCTCTAGCATGACT+TGG | 0.558700 | 4.2:+88813020 | None:intergenic |
| CCACAAGTGTGACTAAAAGA+AGG | 0.559006 | 4.2:+88813227 | None:intergenic |
| CTTGTATTACTGCTCTTACC+GGG | 0.560113 | 4.2:+88811919 | None:intergenic |
| TCACACACTATGCCTCCAAA+TGG | 0.565296 | 4.2:-88813511 | MS.gene79506:CDS |
| GAGAGTGTTATGGAGAGAAG+AGG | 0.565489 | 4.2:-88811585 | MS.gene79506:CDS |
| CTGAGAGTGTAACAACATCA+TGG | 0.565826 | 4.2:-88813442 | MS.gene79506:CDS |
| ACTAGGTTGGTGAATGTCAA+AGG | 0.568083 | 4.2:-88811495 | MS.gene79506:CDS |
| TGGCTGTTCTCAATAGCCTA+AGG | 0.576412 | 4.2:+88813342 | None:intergenic |
| TACGTCAGGGAGCCATTTGG+AGG | 0.580124 | 4.2:+88813499 | None:intergenic |
| GTAGGACTCCTAATAGGTGG+AGG | 0.587068 | 4.2:-88811473 | MS.gene79506:CDS |
| GGAATTGAATCTTTCTCTGG+TGG | 0.592373 | 4.2:+88813377 | None:intergenic |
| AGCCTAAGGAGAAAGTTACA+TGG | 0.596046 | 4.2:+88813356 | None:intergenic |
| GATAGAGATAAAGAAGCTAA+GGG | 0.596543 | 4.2:-88811733 | MS.gene79506:CDS |
| CGACGCATGCATCCTAGACA+TGG | 0.605500 | 4.2:-88813603 | MS.gene79506:CDS |
| ATGTTCATAGGCTGCAAAGT+CGG | 0.610029 | 4.2:-88811707 | MS.gene79506:CDS |
| GCTATTGAGAACAGCCAACA+TGG | 0.614379 | 4.2:-88813336 | MS.gene79506:CDS |
| TCCATCAACACCAACCATGT+TGG | 0.615204 | 4.2:+88813322 | None:intergenic |
| GATAATGAAGGTGCTAAAAG+TGG | 0.616365 | 4.2:-88813149 | MS.gene79506:CDS |
| GGTTGGTGAATGTCAAAGGT+AGG | 0.618637 | 4.2:-88811491 | MS.gene79506:CDS |
| TTGAGAACAGCCAACATGGT+TGG | 0.624834 | 4.2:-88813332 | MS.gene79506:CDS |
| AAGTAGCTCAAATAATGTAG+TGG | 0.626420 | 4.2:+88813712 | None:intergenic |
| AAGGTAGGACTCCTAATAGG+TGG | 0.629028 | 4.2:-88811476 | MS.gene79506:CDS |
| AATCACAACATGGATTGGAG+TGG | 0.633303 | 4.2:-88811855 | MS.gene79506:CDS |
| TGGACTAGAAGCAGTTCCAA+CGG | 0.644451 | 4.2:-88811793 | MS.gene79506:CDS |
| CATCAACAGCAGCTTCACAA+AGG | 0.652375 | 4.2:+88813087 | None:intergenic |
| GTATCAAAGCAAGAAAGGAA+GGG | 0.653582 | 4.2:-88812014 | MS.gene79506:CDS |
| GATGATGGAACCGATTAAGT+CGG | 0.654225 | 4.2:+88813532 | None:intergenic |
| GTCGTCGAACCAGCATTCTG+AGG | 0.664519 | 4.2:+88813622 | None:intergenic |
| ACACAATATCAATCACAACA+TGG | 0.716723 | 4.2:-88811865 | MS.gene79506:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATGCAAAAATAAAAA+AGG | - | chr4.2:88812866-88812885 | MS.gene79506:intron | 10.0% |
| !! | TTTATATATGAAAATATTAG+TGG | - | chr4.2:88812288-88812307 | MS.gene79506:intron | 10.0% |
| !! | ATATTAGTGGTTAATTTATT+AGG | - | chr4.2:88812301-88812320 | MS.gene79506:intron | 15.0% |
| !! | TATTAGTGGTTAATTTATTA+GGG | - | chr4.2:88812302-88812321 | MS.gene79506:intron | 15.0% |
| !!! | ATTATTTGTTGAGTAAATTT+TGG | + | chr4.2:88812980-88812999 | None:intergenic | 15.0% |
| !! | AATATTTATTTGTTCTGTGT+TGG | + | chr4.2:88811537-88811556 | None:intergenic | 20.0% |
| !! | ATAAGAATATTCAAACAAAC+AGG | - | chr4.2:88812650-88812669 | MS.gene79506:intron | 20.0% |
| !! | ATTAGTGGTTAATTTATTAG+GGG | - | chr4.2:88812303-88812322 | MS.gene79506:intron | 20.0% |
| !!! | AAAGTATGTTTTCTTTATCT+TGG | - | chr4.2:88812241-88812260 | MS.gene79506:intron | 20.0% |
| !!! | GATAAAGAAAACATACTTTT+AGG | + | chr4.2:88812240-88812259 | None:intergenic | 20.0% |
| ! | ATATAAAATCCCTTGATATG+GGG | - | chr4.2:88812706-88812725 | MS.gene79506:intron | 25.0% |
| ! | ATATTCAAACAAACAGGAAT+AGG | - | chr4.2:88812656-88812675 | MS.gene79506:intron | 25.0% |
| ! | ATGTTGAAGGATTATTAAGA+AGG | + | chr4.2:88812370-88812389 | None:intergenic | 25.0% |
| ! | ATTATTAAGAAGGATGTCTA+AGG | + | chr4.2:88812360-88812379 | None:intergenic | 25.0% |
| ! | ATTTCTACAATCATTGTACT+CGG | - | chr4.2:88812998-88813017 | MS.gene79506:CDS | 25.0% |
| ! | GATATAAAATCCCTTGATAT+GGG | - | chr4.2:88812705-88812724 | MS.gene79506:intron | 25.0% |
| ! | GTTAATCAAGTGCTTATTAA+TGG | + | chr4.2:88812926-88812945 | None:intergenic | 25.0% |
| ! | TATTCAAACAAACAGGAATA+GGG | - | chr4.2:88812657-88812676 | MS.gene79506:intron | 25.0% |
| ! | TGATATAAAATCCCTTGATA+TGG | - | chr4.2:88812704-88812723 | MS.gene79506:intron | 25.0% |
| ! | TTGTTTGAATATTCTTATGC+TGG | + | chr4.2:88812648-88812667 | None:intergenic | 25.0% |
| !! | AAATAATGTAGTGGAACAAT+TGG | + | chr4.2:88811486-88811505 | None:intergenic | 25.0% |
| !! | AAATCCAAAAAGCCTATTTT+TGG | + | chr4.2:88812599-88812618 | None:intergenic | 25.0% |
| !! | AAATTGTGTTATACCCTTTT+CGG | + | chr4.2:88811732-88811751 | None:intergenic | 25.0% |
| !! | TTTGTTAGTTTGGATAATGA+AGG | - | chr4.2:88812043-88812062 | MS.gene79506:intron | 25.0% |
| !!! | TACTTTTAGGTAAGTATCAA+TGG | + | chr4.2:88812227-88812246 | None:intergenic | 25.0% |
| AAGTAGCTCAAATAATGTAG+TGG | + | chr4.2:88811495-88811514 | None:intergenic | 30.0% | |
| AATCCTTGTATTTATGTGGT+TGG | - | chr4.2:88812488-88812507 | MS.gene79506:intron | 30.0% | |
| ACACAATATCAATCACAACA+TGG | - | chr4.2:88813339-88813358 | MS.gene79506:CDS | 30.0% | |
| AGATAGAGATAAAGAAGCTA+AGG | - | chr4.2:88813470-88813489 | MS.gene79506:CDS | 30.0% | |
| AGGAGATTTAAACTCTCTTA+AGG | - | chr4.2:88812447-88812466 | MS.gene79506:intron | 30.0% | |
| ATAAGCTTGTAATCTACATG+TGG | - | chr4.2:88812739-88812758 | MS.gene79506:intron | 30.0% | |
| ATATCAATCACAACATGGAT+TGG | - | chr4.2:88813344-88813363 | MS.gene79506:CDS | 30.0% | |
| CCACATAAATACAAGGATTA+AGG | + | chr4.2:88812487-88812506 | None:intergenic | 30.0% | |
| CCTTAATCCTTGTATTTATG+TGG | - | chr4.2:88812484-88812503 | MS.gene79506:intron | 30.0% | |
| CTACTTCTGATATGAAAACT+AGG | - | chr4.2:88813692-88813711 | MS.gene79506:CDS | 30.0% | |
| GATAGAGATAAAGAAGCTAA+GGG | - | chr4.2:88813471-88813490 | MS.gene79506:CDS | 30.0% | |
| GTTAATTTATTAGGGGAAGA+GGG | - | chr4.2:88812310-88812329 | MS.gene79506:intron | 30.0% | |
| TAAGAGAGTTTAAATCTCCT+CGG | + | chr4.2:88812447-88812466 | None:intergenic | 30.0% | |
| TACTTTGTGAAAACACTTTC+TGG | - | chr4.2:88811626-88811645 | MS.gene79506:CDS | 30.0% | |
| TTCTGATATGAAAACTAGGT+TGG | - | chr4.2:88813696-88813715 | MS.gene79506:CDS | 30.0% | |
| ! | ACTATGTCTTTTTGTGTAAC+AGG | - | chr4.2:88813156-88813175 | MS.gene79506:CDS | 30.0% |
| ! | GAAACCAAAAATAGGCTTTT+TGG | - | chr4.2:88812592-88812611 | MS.gene79506:intron | 30.0% |
| ! | TCTCTTTGGAAACCAAAAAT+AGG | - | chr4.2:88812584-88812603 | MS.gene79506:intron | 30.0% |
| !! | ATTTTGGTCCAACTTCTATA+AGG | + | chr4.2:88812964-88812983 | None:intergenic | 30.0% |
| !! | TGTTAAGAGGTTTGTTAGTT+TGG | - | chr4.2:88812033-88812052 | MS.gene79506:intron | 30.0% |
| !! | TTATTTGTTCTGTGTTGGTT+TGG | + | chr4.2:88811532-88811551 | None:intergenic | 30.0% |
| !! | TTGTTATTAGGCTTGTTAAG+AGG | - | chr4.2:88812020-88812039 | MS.gene79506:CDS | 30.0% |
| !!! | AGAAGAAAGGGTTTTTTAAG+TGG | - | chr4.2:88813560-88813579 | MS.gene79506:CDS | 30.0% |
| !!! | TGGATTTTGAGCTTGTTATT+AGG | - | chr4.2:88812008-88812027 | MS.gene79506:CDS | 30.0% |
| ACTTCTTGTGATGCTCATTA+TGG | + | chr4.2:88813377-88813396 | None:intergenic | 35.0% | |
| ACTTGTATTACTGCTCTTAC+CGG | + | chr4.2:88813289-88813308 | None:intergenic | 35.0% | |
| AGAATGGTTGAGAAGAAGAA+AGG | - | chr4.2:88813547-88813566 | MS.gene79506:CDS | 35.0% | |
| AGCTAGAGAAGAGAATTTCA+TGG | - | chr4.2:88811918-88811937 | MS.gene79506:CDS | 35.0% | |
| ATAGATTTCCTCCACCTATT+AGG | + | chr4.2:88813742-88813761 | None:intergenic | 35.0% | |
| ATCACAAGAAGTCCAACAAA+TGG | - | chr4.2:88813385-88813404 | MS.gene79506:CDS | 35.0% | |
| CAAAGAGATTCTAATCTCCT+TGG | + | chr4.2:88812572-88812591 | None:intergenic | 35.0% | |
| CAACATCATGGATGAAGAAA+AGG | - | chr4.2:88811774-88811793 | MS.gene79506:CDS | 35.0% | |
| CAAGGAGATTAGAATCTCTT+TGG | - | chr4.2:88812570-88812589 | MS.gene79506:intron | 35.0% | |
| CAAGTGTATCAAAGCAAGAA+AGG | - | chr4.2:88813185-88813204 | MS.gene79506:CDS | 35.0% | |
| CATGGAATTGAATCTTTCTC+TGG | + | chr4.2:88811833-88811852 | None:intergenic | 35.0% | |
| CTTTCTTGCTTTGATACACT+TGG | + | chr4.2:88813187-88813206 | None:intergenic | 35.0% | |
| CTTTGACACTTATAGTACCA+AGG | - | chr4.2:88812552-88812571 | MS.gene79506:intron | 35.0% | |
| GAATGGTTGAGAAGAAGAAA+GGG | - | chr4.2:88813548-88813567 | MS.gene79506:CDS | 35.0% | |
| GGTTAATTTATTAGGGGAAG+AGG | - | chr4.2:88812309-88812328 | MS.gene79506:intron | 35.0% | |
| GTATCAAAGCAAGAAAGGAA+GGG | - | chr4.2:88813190-88813209 | MS.gene79506:CDS | 35.0% | |
| GTTAGACACCTTATAGAAGT+TGG | - | chr4.2:88812953-88812972 | MS.gene79506:intron | 35.0% | |
| TATGCAGACTAATAGATTGC+AGG | - | chr4.2:88813215-88813234 | MS.gene79506:CDS | 35.0% | |
| TCTAGTCCAAATCCATTTGT+TGG | + | chr4.2:88813400-88813419 | None:intergenic | 35.0% | |
| TGGTGGTAGAACATTAACTA+AGG | + | chr4.2:88811813-88811832 | None:intergenic | 35.0% | |
| TGTATCAAAGCAAGAAAGGA+AGG | - | chr4.2:88813189-88813208 | MS.gene79506:CDS | 35.0% | |
| TTCATATCAGAAGTAGTAGC+AGG | + | chr4.2:88813688-88813707 | None:intergenic | 35.0% | |
| TTCCATGTAACTTTCTCCTT+AGG | - | chr4.2:88811846-88811865 | MS.gene79506:CDS | 35.0% | |
| TTGCCAACCACATAAATACA+AGG | + | chr4.2:88812494-88812513 | None:intergenic | 35.0% | |
| TTTAAGTGGAGTAAGAGGTT+TGG | - | chr4.2:88813574-88813593 | MS.gene79506:CDS | 35.0% | |
| TTTGGTTAAGGTTGCTAAGT+TGG | - | chr4.2:88812084-88812103 | MS.gene79506:intron | 35.0% | |
| ! | AATAGGCTTTTTGGATTTCC+TGG | - | chr4.2:88812601-88812620 | MS.gene79506:intron | 35.0% |
| ! | AGAAGTCCAACAAATGGATT+TGG | - | chr4.2:88813391-88813410 | MS.gene79506:CDS | 35.0% |
| ! | CTTCTTTTAGTCACACTTGT+GGG | - | chr4.2:88811978-88811997 | MS.gene79506:CDS | 35.0% |
| ! | TGTTGATGCTAATTTGAGGT+TGG | - | chr4.2:88812132-88812151 | MS.gene79506:intron | 35.0% |
| !! | CTTTCTGGAATCAAAGCAAA+AGG | - | chr4.2:88811641-88811660 | MS.gene79506:CDS | 35.0% |
| !! | GATAATGAAGGTGCTAAAAG+TGG | - | chr4.2:88812055-88812074 | MS.gene79506:intron | 35.0% |
| !!! | GAGAAGTTTGATGGTGATTT+TGG | + | chr4.2:88811563-88811582 | None:intergenic | 35.0% |
| !!! | GGTTTTTTAAGTGGAGTAAG+AGG | - | chr4.2:88813569-88813588 | MS.gene79506:CDS | 35.0% |
| AAGATTAGATGGCTGAGACT+CGG | + | chr4.2:88813087-88813106 | None:intergenic | 40.0% | |
| AGCCTAAGGAGAAAGTTACA+TGG | + | chr4.2:88811851-88811870 | None:intergenic | 40.0% | |
| AGCTAAGGGAAGATGTTCAT+AGG | - | chr4.2:88813485-88813504 | MS.gene79506:CDS | 40.0% | |
| AGTATGAGTCGAGATGTTGA+AGG | + | chr4.2:88812383-88812402 | None:intergenic | 40.0% | |
| ATGTTCATAGGCTGCAAAGT+CGG | - | chr4.2:88813497-88813516 | MS.gene79506:CDS | 40.0% | |
| CAACACATGAAACAGTTTCC+AGG | + | chr4.2:88812622-88812641 | None:intergenic | 40.0% | |
| CAATGCAATGCAAGTTCAGA+TGG | - | chr4.2:88813522-88813541 | MS.gene79506:CDS | 40.0% | |
| CATGATGTTGTTACACTCTC+AGG | + | chr4.2:88811764-88811783 | None:intergenic | 40.0% | |
| CCACAAGTGTGACTAAAAGA+AGG | + | chr4.2:88811980-88811999 | None:intergenic | 40.0% | |
| CTAGCTAGGCTATAGCTTAA+CGG | - | chr4.2:88812404-88812423 | MS.gene79506:intron | 40.0% | |
| CTCTCTTAAGGACATCTCAT+AGG | - | chr4.2:88812459-88812478 | MS.gene79506:intron | 40.0% | |
| CTGCTGTTGATGCTAATTTG+AGG | - | chr4.2:88812128-88812147 | MS.gene79506:intron | 40.0% | |
| CTTGTATTACTGCTCTTACC+GGG | + | chr4.2:88813288-88813307 | None:intergenic | 40.0% | |
| GAACGTCGATGAAGATTAGA+TGG | + | chr4.2:88813098-88813117 | None:intergenic | 40.0% | |
| GATGGAGATGAAGTTGAGTT+TGG | - | chr4.2:88813652-88813671 | MS.gene79506:CDS | 40.0% | |
| GGAATTGAATCTTTCTCTGG+TGG | + | chr4.2:88811830-88811849 | None:intergenic | 40.0% | |
| TAGTCCACATACTCATGCAT+GGG | - | chr4.2:88812770-88812789 | MS.gene79506:intron | 40.0% | |
| TCAAAGGTAGGACTCCTAAT+AGG | - | chr4.2:88813725-88813744 | MS.gene79506:CDS | 40.0% | |
| TCACAAAGTAGTCCATGTCT+AGG | + | chr4.2:88811616-88811635 | None:intergenic | 40.0% | |
| TTTGATAAACATCGTGCCGT+TGG | + | chr4.2:88813430-88813449 | None:intergenic | 40.0% | |
| ! | CATTCTGAGGAGAAGTTTGA+TGG | + | chr4.2:88811572-88811591 | None:intergenic | 40.0% |
| ! | CCTTCTTTTAGTCACACTTG+TGG | - | chr4.2:88811977-88811996 | MS.gene79506:CDS | 40.0% |
| ! | CTAAAGTGTCCCCATATCAA+GGG | + | chr4.2:88812718-88812737 | None:intergenic | 40.0% |
| ! | CTGAGAGTGTAACAACATCA+TGG | - | chr4.2:88811762-88811781 | MS.gene79506:CDS | 40.0% |
| ! | TCATTTTACAACTGTCTCCG+AGG | - | chr4.2:88812427-88812446 | MS.gene79506:intron | 40.0% |
| ! | TTTTCCCATGCATGAGTATG+TGG | + | chr4.2:88812777-88812796 | None:intergenic | 40.0% |
| !! | AATCACAACATGGATTGGAG+TGG | - | chr4.2:88813349-88813368 | MS.gene79506:CDS | 40.0% |
| !! | ACTAGGTTGGTGAATGTCAA+AGG | - | chr4.2:88813709-88813728 | MS.gene79506:CDS | 40.0% |
| !! | GATGAGTTTGTTACTCTTGC+TGG | - | chr4.2:88812154-88812173 | MS.gene79506:intron | 40.0% |
| !! | GATGATGGAACCGATTAAGT+CGG | + | chr4.2:88811675-88811694 | None:intergenic | 40.0% |
| !! | TGGTAAAGGAGAGAGTGTTA+TGG | - | chr4.2:88813609-88813628 | MS.gene79506:CDS | 40.0% |
| AAGGTAGGACTCCTAATAGG+TGG | - | chr4.2:88813728-88813747 | MS.gene79506:CDS | 45.0% | |
| AGCACAAAACGAACGATTCC+CGG | - | chr4.2:88813267-88813286 | MS.gene79506:CDS | 45.0% | |
| CAAACTTCTCCTCAGAATGC+TGG | - | chr4.2:88811573-88811592 | MS.gene79506:CDS | 45.0% | |
| CATCAACAGCAGCTTCACAA+AGG | + | chr4.2:88812120-88812139 | None:intergenic | 45.0% | |
| CATGCTAGAGCTACTGATGA+TGG | - | chr4.2:88812190-88812209 | MS.gene79506:intron | 45.0% | |
| CCTTGATATGGGGACACTTT+AGG | - | chr4.2:88812716-88812735 | MS.gene79506:intron | 45.0% | |
| CTAGTCCACATACTCATGCA+TGG | - | chr4.2:88812769-88812788 | MS.gene79506:intron | 45.0% | |
| GCAAGTTCAGATGGAGAGAA+TGG | - | chr4.2:88813531-88813550 | MS.gene79506:CDS | 45.0% | |
| GCTATTGAGAACAGCCAACA+TGG | - | chr4.2:88811868-88811887 | MS.gene79506:CDS | 45.0% | |
| GTTATGGAGAGAAGAGGAGA+AGG | - | chr4.2:88813625-88813644 | MS.gene79506:CDS | 45.0% | |
| TCACACACTATGCCTCCAAA+TGG | - | chr4.2:88811693-88811712 | MS.gene79506:CDS | 45.0% | |
| TCCATCAACACCAACCATGT+TGG | + | chr4.2:88811885-88811904 | None:intergenic | 45.0% | |
| TGGCTGTTCTCAATAGCCTA+AGG | + | chr4.2:88811865-88811884 | None:intergenic | 45.0% | |
| TTGAGAACAGCCAACATGGT+TGG | - | chr4.2:88811872-88811891 | MS.gene79506:CDS | 45.0% | |
| ! | CCTAAAGTGTCCCCATATCA+AGG | + | chr4.2:88812719-88812738 | None:intergenic | 45.0% |
| ! | TCACACTTGTGGGACTCTTT+TGG | - | chr4.2:88811988-88812007 | MS.gene79506:CDS | 45.0% |
| ! | TGGACTAGAAGCAGTTCCAA+CGG | - | chr4.2:88813411-88813430 | MS.gene79506:CDS | 45.0% |
| !! | AAGTGGTGCTGCTTTGGTTA+AGG | - | chr4.2:88812072-88812091 | MS.gene79506:intron | 45.0% |
| !! | AGAAGAGGAGAAGGTGTTGA+TGG | - | chr4.2:88813634-88813653 | MS.gene79506:CDS | 45.0% |
| !! | AGTAAGAGGTTTGGTGTGCA+TGG | - | chr4.2:88813583-88813602 | MS.gene79506:CDS | 45.0% |
| !! | GAGAGTGTTATGGAGAGAAG+AGG | - | chr4.2:88813619-88813638 | MS.gene79506:CDS | 45.0% |
| !! | GCTTTGTTTGCTCTGAGAGA+AGG | + | chr4.2:88813312-88813331 | None:intergenic | 45.0% |
| !! | GGTTGGTGAATGTCAAAGGT+AGG | - | chr4.2:88813713-88813732 | MS.gene79506:CDS | 45.0% |
| !! | TCAGTAGCTCTAGCATGACT+TGG | + | chr4.2:88812187-88812206 | None:intergenic | 45.0% |
| !! | TGCTAAAAGTGGTGCTGCTT+TGG | - | chr4.2:88812066-88812085 | MS.gene79506:intron | 45.0% |
| !!! | AGGTTTGGTGTGCATGGTTT+TGG | - | chr4.2:88813589-88813608 | MS.gene79506:CDS | 45.0% |
| !!! | GGTGTGCATGGTTTTGGTAA+AGG | - | chr4.2:88813595-88813614 | MS.gene79506:CDS | 45.0% |
| CTCGACTCATACTGCTAGCT+AGG | - | chr4.2:88812390-88812409 | MS.gene79506:intron | 50.0% | |
| GTAGGACTCCTAATAGGTGG+AGG | - | chr4.2:88813731-88813750 | MS.gene79506:CDS | 50.0% | |
| ! | ATACCCTTTTCGGCTACGTC+AGG | + | chr4.2:88811722-88811741 | None:intergenic | 50.0% |
| ! | GGAGGCATAGTGTGTGATGA+TGG | + | chr4.2:88811690-88811709 | None:intergenic | 50.0% |
| ! | GGTGTTCGAGCCGACTTAAT+CGG | - | chr4.2:88811662-88811681 | MS.gene79506:CDS | 50.0% |
| ! | TACCCTTTTCGGCTACGTCA+GGG | + | chr4.2:88811721-88811740 | None:intergenic | 50.0% |
| !! | GCCAACATGGTTGGTGTTGA+TGG | - | chr4.2:88811881-88811900 | MS.gene79506:CDS | 50.0% |
| CGACGCATGCATCCTAGACA+TGG | - | chr4.2:88811601-88811620 | MS.gene79506:CDS | 55.0% | |
| CTCCCTGACGTAGCCGAAAA+GGG | - | chr4.2:88811716-88811735 | MS.gene79506:CDS | 55.0% | |
| GTCGTCGAACCAGCATTCTG+AGG | + | chr4.2:88811585-88811604 | None:intergenic | 55.0% | |
| TACGTCAGGGAGCCATTTGG+AGG | + | chr4.2:88811708-88811727 | None:intergenic | 55.0% | |
| GCTCCCTGACGTAGCCGAAA+AGG | - | chr4.2:88811715-88811734 | MS.gene79506:CDS | 60.0% | |
| GGCTACGTCAGGGAGCCATT+TGG | + | chr4.2:88811711-88811730 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 88811458 | 88813768 | 88811458 | ID=MS.gene79506 |
| chr4.2 | mRNA | 88811458 | 88813768 | 88811458 | ID=MS.gene79506.t1;Parent=MS.gene79506 |
| chr4.2 | exon | 88812983 | 88813768 | 88812983 | ID=MS.gene79506.t1.exon1;Parent=MS.gene79506.t1 |
| chr4.2 | CDS | 88812983 | 88813768 | 88812983 | ID=cds.MS.gene79506.t1;Parent=MS.gene79506.t1 |
| chr4.2 | exon | 88811458 | 88812048 | 88811458 | ID=MS.gene79506.t1.exon2;Parent=MS.gene79506.t1 |
| chr4.2 | CDS | 88811458 | 88812048 | 88811458 | ID=cds.MS.gene79506.t1;Parent=MS.gene79506.t1 |
| Gene Sequence |
| Protein sequence |
