Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040597.01.T01 | XP_003625286.1 | 87.692 | 390 | 12 | 1 | 1 | 390 | 1 | 354 | 0 | 641 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040597.01.T01 | Q8BK64 | 30.179 | 391 | 214 | 9 | 1 | 389 | 1 | 334 | 4.07E-41 | 151 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040597.01.T01 | G7KW94 | 87.692 | 390 | 12 | 1 | 1 | 390 | 1 | 354 | 0.0 | 641 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047814.01 | MsG0780040597.01 | 0.826526 | 2.584614e-54 | 2.429875e-51 |
MsG0080048687.01 | MsG0780040597.01 | 0.819365 | 1.206821e-52 | 9.267150e-50 |
MsG0180000001.01 | MsG0780040597.01 | 0.824758 | 6.785101e-54 | 6.066235e-51 |
MsG0180000155.01 | MsG0780040597.01 | 0.813086 | 3.057714e-51 | 1.977684e-48 |
MsG0180000235.01 | MsG0780040597.01 | 0.809898 | 1.507268e-50 | 8.957732e-48 |
MsG0180000332.01 | MsG0780040597.01 | 0.807260 | 5.512734e-50 | 3.056387e-47 |
MsG0180000799.01 | MsG0780040597.01 | 0.838757 | 2.379172e-57 | 3.217715e-54 |
MsG0180001173.01 | MsG0780040597.01 | 0.813670 | 2.276224e-51 | 1.495833e-48 |
MsG0180001237.01 | MsG0780040597.01 | 0.823836 | 1.117693e-53 | 9.733023e-51 |
MsG0180001260.01 | MsG0780040597.01 | 0.803112 | 4.072879e-49 | 2.029546e-46 |
MsG0180001294.01 | MsG0780040597.01 | 0.852214 | 5.346213e-61 | 1.109220e-57 |
MsG0180001599.01 | MsG0780040597.01 | 0.804704 | 1.901468e-49 | 9.871419e-47 |
MsG0180002283.01 | MsG0780040597.01 | 0.809328 | 1.997548e-50 | 1.169408e-47 |
MsG0180003031.01 | MsG0780040597.01 | 0.869979 | 2.063101e-66 | 7.893301e-63 |
MsG0180003303.01 | MsG0780040597.01 | 0.825886 | 3.669667e-54 | 3.388033e-51 |
MsG0180003444.01 | MsG0780040597.01 | 0.805760 | 1.142400e-49 | 6.094586e-47 |
MsG0180003627.01 | MsG0780040597.01 | 0.816095 | 6.596936e-52 | 4.631093e-49 |
MsG0180003744.01 | MsG0780040597.01 | 0.824968 | 6.053410e-54 | 5.444551e-51 |
MsG0180003860.01 | MsG0780040597.01 | 0.830687 | 2.551637e-55 | 2.708197e-52 |
MsG0180003977.01 | MsG0780040597.01 | 0.829667 | 4.527537e-55 | 4.665128e-52 |
MsG0180003984.01 | MsG0780040597.01 | 0.822219 | 2.663231e-53 | 2.215162e-50 |
MsG0180004050.01 | MsG0780040597.01 | 0.877222 | 7.472195e-69 | 3.728241e-65 |
MsG0180004056.01 | MsG0780040597.01 | 0.813662 | 2.284958e-51 | 1.501279e-48 |
MsG0180004180.01 | MsG0780040597.01 | 0.828765 | 7.492553e-55 | 7.517916e-52 |
MsG0180004294.01 | MsG0780040597.01 | 0.804181 | 2.443301e-49 | 1.251467e-46 |
MsG0180004389.01 | MsG0780040597.01 | 0.802524 | 5.384891e-49 | 2.643495e-46 |
MsG0180004598.01 | MsG0780040597.01 | 0.803341 | 3.651368e-49 | 1.830252e-46 |
MsG0180004767.01 | MsG0780040597.01 | 0.801596 | 8.355030e-49 | 4.005808e-46 |
MsG0180004991.01 | MsG0780040597.01 | 0.832164 | 1.105389e-55 | 1.225418e-52 |
MsG0180005049.01 | MsG0780040597.01 | 0.812386 | 4.351355e-51 | 2.762846e-48 |
MsG0180005324.01 | MsG0780040597.01 | 0.809479 | 1.853815e-50 | 1.089612e-47 |
MsG0180005407.01 | MsG0780040597.01 | 0.839963 | 1.156683e-57 | 1.623596e-54 |
MsG0180005614.01 | MsG0780040597.01 | 0.807579 | 4.718308e-50 | 2.637498e-47 |
MsG0180005746.01 | MsG0780040597.01 | 0.802357 | 5.829282e-49 | 2.849741e-46 |
MsG0180005765.01 | MsG0780040597.01 | 0.853093 | 3.000381e-61 | 6.407793e-58 |
MsG0180005878.01 | MsG0780040597.01 | 0.811160 | 8.042487e-51 | 4.941925e-48 |
MsG0180006098.01 | MsG0780040597.01 | 0.804904 | 1.726871e-49 | 9.012303e-47 |
MsG0180006155.01 | MsG0780040597.01 | 0.815870 | 7.407403e-52 | 5.167645e-49 |
MsG0180006235.01 | MsG0780040597.01 | 0.800806 | 1.212757e-48 | 5.699692e-46 |
MsG0280006305.01 | MsG0780040597.01 | 0.854403 | 1.259894e-61 | 2.810352e-58 |
MsG0280006313.01 | MsG0780040597.01 | 0.801510 | 8.704904e-49 | 4.164690e-46 |
MsG0780040312.01 | MsG0780040597.01 | 0.845429 | 4.083057e-59 | 6.802185e-56 |
MsG0780040411.01 | MsG0780040597.01 | 0.834623 | 2.693236e-56 | 3.213787e-53 |
MsG0780040597.01 | MsG0780040691.01 | 0.811686 | 6.183763e-51 | 3.852749e-48 |
MsG0780040597.01 | MsG0780040845.01 | 0.864459 | 1.198131e-64 | 3.764749e-61 |
MsG0780040597.01 | MsG0780041222.01 | 0.806631 | 7.491273e-50 | 4.085799e-47 |
MsG0780040597.01 | MsG0780041239.01 | 0.806675 | 7.332362e-50 | 4.003799e-47 |
MsG0780040597.01 | MsG0780041295.01 | 0.815196 | 1.046319e-51 | 7.165680e-49 |
MsG0780040597.01 | MsG0780041423.01 | 0.863024 | 3.343527e-64 | 9.991171e-61 |
MsG0780040597.01 | MsG0780041469.01 | 0.811308 | 7.470399e-51 | 4.608117e-48 |
MsG0780040597.01 | MsG0780041754.01 | 0.804356 | 2.246897e-49 | 1.156076e-46 |
MsG0780040597.01 | MsG0780041796.01 | 0.872562 | 2.891472e-67 | 1.215647e-63 |
MsG0780040597.01 | MsG0880042052.01 | 0.822414 | 2.399340e-53 | 2.006968e-50 |
MsG0780040597.01 | MsG0880042552.01 | 0.847830 | 9.021882e-60 | 1.623724e-56 |
MsG0780040597.01 | MsG0880042760.01 | 0.811925 | 5.484865e-51 | 3.439082e-48 |
MsG0780040597.01 | MsG0880042779.01 | 0.806590 | 7.639466e-50 | 4.162551e-47 |
MsG0780040597.01 | MsG0880042848.01 | 0.809595 | 1.750586e-50 | 1.032175e-47 |
MsG0780040597.01 | MsG0880043532.01 | 0.830530 | 2.788431e-55 | 2.945599e-52 |
MsG0780040597.01 | MsG0880044990.01 | 0.825650 | 4.176442e-54 | 3.829778e-51 |
MsG0780040597.01 | MsG0880045393.01 | 0.839585 | 1.450695e-57 | 2.012362e-54 |
MsG0780040597.01 | MsG0880045619.01 | 0.817639 | 2.970285e-52 | 2.175038e-49 |
MsG0780040597.01 | MsG0880045656.01 | 0.816205 | 6.234986e-52 | 4.390144e-49 |
MsG0780040597.01 | MsG0880045754.01 | 0.882151 | 1.324336e-70 | 7.976893e-67 |
MsG0780040597.01 | MsG0880046047.01 | 0.802589 | 5.222218e-49 | 2.567951e-46 |
MsG0780040597.01 | MsG0880046113.01 | 0.827056 | 1.930909e-54 | 1.843389e-51 |
MsG0780040597.01 | MsG0880046177.01 | 0.804719 | 1.887703e-49 | 9.804236e-47 |
MsG0780040597.01 | MsG0880047016.01 | 0.834714 | 2.555469e-56 | 3.057281e-53 |
MsG0780040597.01 | MsG0880047192.01 | 0.838673 | 2.500547e-57 | 3.373340e-54 |
MsG0280010567.01 | MsG0780040597.01 | 0.815007 | 1.152416e-51 | 7.852544e-49 |
MsG0280011332.01 | MsG0780040597.01 | 0.862914 | 3.614437e-64 | 1.076357e-60 |
MsG0380012124.01 | MsG0780040597.01 | 0.809676 | 1.682144e-50 | 9.939299e-48 |
MsG0380013754.01 | MsG0780040597.01 | 0.805767 | 1.138926e-49 | 6.076867e-47 |
MsG0380014365.01 | MsG0780040597.01 | 0.832355 | 9.911471e-56 | 1.105091e-52 |
MsG0380014489.01 | MsG0780040597.01 | 0.853116 | 2.955870e-61 | 6.317317e-58 |
MsG0380014539.01 | MsG0780040597.01 | 0.880782 | 4.132084e-70 | 2.360949e-66 |
MsG0380014541.01 | MsG0780040597.01 | 0.877629 | 5.392478e-69 | 2.730144e-65 |
MsG0380014885.01 | MsG0780040597.01 | 0.810521 | 1.106049e-50 | 6.681681e-48 |
MsG0680031506.01 | MsG0780040597.01 | 0.806211 | 9.183067e-50 | 4.955785e-47 |
MsG0680031507.01 | MsG0780040597.01 | 0.822763 | 1.990523e-53 | 1.681644e-50 |
MsG0680031508.01 | MsG0780040597.01 | 0.805619 | 1.223023e-49 | 6.500528e-47 |
MsG0680031699.01 | MsG0780040597.01 | 0.802547 | 5.326296e-49 | 2.616329e-46 |
MsG0680034061.01 | MsG0780040597.01 | 0.819667 | 1.029649e-52 | 7.974214e-50 |
MsG0680035306.01 | MsG0780040597.01 | 0.831248 | 1.859045e-55 | 2.005840e-52 |
MsG0680035574.01 | MsG0780040597.01 | 0.815132 | 1.081262e-51 | 7.392029e-49 |
MsG0480018462.01 | MsG0780040597.01 | 0.865899 | 4.223564e-65 | 1.396796e-61 |
MsG0480018479.01 | MsG0780040597.01 | 0.803635 | 3.173734e-49 | 1.602932e-46 |
MsG0480018894.01 | MsG0780040597.01 | 0.809170 | 2.160320e-50 | 1.259359e-47 |
MsG0480019539.01 | MsG0780040597.01 | 0.805811 | 1.114897e-49 | 5.955256e-47 |
MsG0480020331.01 | MsG0780040597.01 | 0.832415 | 9.575567e-56 | 1.069591e-52 |
MsG0480020791.01 | MsG0780040597.01 | 0.808249 | 3.398341e-50 | 1.933565e-47 |
MsG0480021432.01 | MsG0780040597.01 | 0.828763 | 7.503072e-55 | 7.527871e-52 |
MsG0480021772.01 | MsG0780040597.01 | 0.835614 | 1.514155e-56 | 1.861345e-53 |
MsG0480021812.01 | MsG0780040597.01 | 0.829269 | 5.656806e-55 | 5.761820e-52 |
MsG0480022026.01 | MsG0780040597.01 | 0.801435 | 9.015523e-49 | 4.305171e-46 |
MsG0480022318.01 | MsG0780040597.01 | 0.816433 | 5.544570e-52 | 3.928028e-49 |
MsG0480022467.01 | MsG0780040597.01 | 0.804709 | 1.896869e-49 | 9.848949e-47 |
MsG0480022678.01 | MsG0780040597.01 | 0.840283 | 9.544091e-58 | 1.352957e-54 |
MsG0480022696.01 | MsG0780040597.01 | 0.850320 | 1.832778e-60 | 3.576373e-57 |
MsG0480022717.01 | MsG0780040597.01 | 0.841641 | 4.201255e-58 | 6.212190e-55 |
MsG0480022855.01 | MsG0780040597.01 | 0.807825 | 4.184197e-50 | 2.354063e-47 |
MsG0480023240.01 | MsG0780040597.01 | 0.801200 | 1.007418e-48 | 4.782229e-46 |
MsG0480023412.01 | MsG0780040597.01 | 0.809848 | 1.544400e-50 | 9.166796e-48 |
MsG0480023415.01 | MsG0780040597.01 | 0.808166 | 3.539798e-50 | 2.009624e-47 |
MsG0480023447.01 | MsG0780040597.01 | 0.837666 | 4.543013e-57 | 5.943665e-54 |
MsG0480023559.01 | MsG0780040597.01 | 0.804396 | 2.203868e-49 | 1.135063e-46 |
MsG0480023600.01 | MsG0780040597.01 | 0.856554 | 2.974108e-62 | 7.126324e-59 |
MsG0480023873.01 | MsG0780040597.01 | 0.804463 | 2.134384e-49 | 1.101178e-46 |
MsG0580024339.01 | MsG0780040597.01 | 0.813317 | 2.721170e-51 | 1.771185e-48 |
MsG0580024353.01 | MsG0780040597.01 | 0.857031 | 2.152013e-62 | 5.238626e-59 |
MsG0580024374.01 | MsG0780040597.01 | 0.830952 | 2.197761e-55 | 2.350808e-52 |
MsG0580024409.01 | MsG0780040597.01 | 0.850455 | 1.679629e-60 | 3.291984e-57 |
MsG0580024536.01 | MsG0780040597.01 | 0.838240 | 3.233585e-57 | 4.304436e-54 |
MsG0580024618.01 | MsG0780040597.01 | 0.855970 | 4.412562e-62 | 1.036853e-58 |
MsG0580024792.01 | MsG0780040597.01 | 0.813047 | 3.118229e-51 | 2.014777e-48 |
MsG0580024819.01 | MsG0780040597.01 | 0.810325 | 1.219521e-50 | 7.328970e-48 |
MsG0580025439.01 | MsG0780040597.01 | 0.801802 | 7.580997e-49 | 3.653920e-46 |
MsG0580025903.01 | MsG0780040597.01 | 0.808570 | 2.902384e-50 | 1.665201e-47 |
MsG0580025989.01 | MsG0780040597.01 | 0.812553 | 4.002112e-51 | 2.552366e-48 |
MsG0380015512.01 | MsG0780040597.01 | 0.842802 | 2.069407e-58 | 3.173404e-55 |
MsG0380015564.01 | MsG0780040597.01 | 0.815837 | 7.533032e-52 | 5.250514e-49 |
MsG0380015713.01 | MsG0780040597.01 | 0.800978 | 1.118235e-48 | 5.278990e-46 |
MsG0380015831.01 | MsG0780040597.01 | 0.829209 | 5.851125e-55 | 5.948900e-52 |
MsG0380016513.01 | MsG0780040597.01 | 0.849475 | 3.158225e-60 | 5.993843e-57 |
MsG0380016604.01 | MsG0780040597.01 | 0.812643 | 3.823466e-51 | 2.444196e-48 |
MsG0380016970.01 | MsG0780040597.01 | 0.801866 | 7.355909e-49 | 3.551293e-46 |
MsG0380016971.01 | MsG0780040597.01 | 0.822294 | 2.557840e-53 | 2.132231e-50 |
MsG0380016985.01 | MsG0780040597.01 | 0.808528 | 2.963756e-50 | 1.698600e-47 |
MsG0380017719.01 | MsG0780040597.01 | 0.838043 | 3.635135e-57 | 4.810978e-54 |
MsG0480018126.01 | MsG0780040597.01 | 0.812745 | 3.631895e-51 | 2.327991e-48 |
MsG0580026157.01 | MsG0780040597.01 | 0.825857 | 3.728244e-54 | 3.439386e-51 |
MsG0580026225.01 | MsG0780040597.01 | 0.812218 | 4.735962e-51 | 2.993541e-48 |
MsG0580028060.01 | MsG0780040597.01 | 0.809932 | 1.482079e-50 | 8.816144e-48 |
MsG0580029658.01 | MsG0780040597.01 | 0.824019 | 1.012737e-53 | 8.863474e-51 |
MsG0580029661.01 | MsG0780040597.01 | 0.807307 | 5.388794e-50 | 2.991350e-47 |
MsG0580030003.01 | MsG0780040597.01 | 0.863465 | 2.442231e-64 | 7.409620e-61 |
MsG0280007024.01 | MsG0780040597.01 | 0.819113 | 1.377392e-52 | 1.050430e-49 |
MsG0280007196.01 | MsG0780040597.01 | 0.813187 | 2.905616e-51 | 1.884458e-48 |
MsG0280007564.01 | MsG0780040597.01 | 0.801292 | 9.647041e-49 | 4.590163e-46 |
MsG0280007585.01 | MsG0780040597.01 | 0.804969 | 1.673282e-49 | 8.746822e-47 |
MsG0280007710.01 | MsG0780040597.01 | 0.805065 | 1.597904e-49 | 8.373234e-47 |
MsG0280007790.01 | MsG0780040597.01 | 0.822695 | 2.064411e-53 | 1.740625e-50 |
MsG0280007876.01 | MsG0780040597.01 | 0.801817 | 7.528750e-49 | 3.630099e-46 |
MsG0280008134.01 | MsG0780040597.01 | 0.819657 | 1.035118e-52 | 8.014421e-50 |
MsG0280008327.01 | MsG0780040597.01 | 0.824978 | 6.020347e-54 | 5.416369e-51 |
MsG0280008502.01 | MsG0780040597.01 | 0.838894 | 2.192398e-57 | 2.977475e-54 |
MsG0280008518.01 | MsG0780040597.01 | 0.802617 | 5.153951e-49 | 2.536192e-46 |
MsG0280008556.01 | MsG0780040597.01 | 0.804627 | 1.972985e-49 | 1.022209e-46 |
MsG0280008758.01 | MsG0780040597.01 | 0.809832 | 1.557191e-50 | 9.238784e-48 |
MsG0280008909.01 | MsG0780040597.01 | 0.810813 | 9.563208e-51 | 5.822566e-48 |
MsG0280010447.01 | MsG0780040597.01 | 0.833026 | 6.753552e-56 | 7.682790e-53 |
MsG0680035876.01 | MsG0780040597.01 | 0.832321 | 1.010551e-55 | 1.125457e-52 |
MsG0780036663.01 | MsG0780040597.01 | 0.806843 | 6.754492e-50 | 3.704592e-47 |
MsG0780038565.01 | MsG0780040597.01 | 0.833257 | 5.916890e-56 | 6.777268e-53 |
MsG0780038630.01 | MsG0780040597.01 | 0.804787 | 1.826972e-49 | 9.505375e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040597.01.T01 | MTR_7g093500 | 87.692 | 390 | 12 | 1 | 1 | 390 | 1 | 354 | 0.0 | 641 |
MsG0780040597.01.T01 | MTR_0136s0060 | 63.939 | 391 | 93 | 5 | 1 | 390 | 1 | 344 | 1.22e-172 | 485 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040597.01.T01 | AT3G12050 | 62.879 | 396 | 105 | 2 | 1 | 390 | 1 | 360 | 7.66e-174 | 489 |
MsG0780040597.01.T01 | AT3G12050 | 56.313 | 396 | 92 | 3 | 1 | 390 | 1 | 321 | 5.34e-144 | 412 |
Find 133 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAGGGAAGGGGTTGATTT+TGG | 0.174539 | 7:-79755744 | MsG0780040597.01.T01:CDS |
TTTGGAGAAGGTTAGGGTTT+GGG | 0.255145 | 7:-79755726 | MsG0780040597.01.T01:CDS |
AATTCGTTGTTGAAGGTTAA+TGG | 0.267141 | 7:-79755881 | MsG0780040597.01.T01:CDS |
TAGGGTTTGGGTTGATAGTA+TGG | 0.282053 | 7:-79755714 | MsG0780040597.01.T01:CDS |
ACCTCCAAATCCTCCTTAAC+AGG | 0.344484 | 7:+79755680 | None:intergenic |
TCCGATTGGGAGGAGGATTA+AGG | 0.345883 | 7:-79755780 | MsG0780040597.01.T01:CDS |
ATTGTGCAGAGGTGGAGATT+TGG | 0.349337 | 7:-79755341 | MsG0780040597.01.T01:CDS |
AAATCAATCTCACTGTTTCC+TGG | 0.353923 | 7:-79755931 | MsG0780040597.01.T01:CDS |
TGGTCCTGTTAAGGAGGATT+TGG | 0.362861 | 7:-79755684 | MsG0780040597.01.T01:CDS |
GCCGTTGAGGATGGTGAGAT+TGG | 0.362978 | 7:+79756048 | None:intergenic |
GGAGAGAAGGTTGGTGAAGA+AGG | 0.364115 | 7:+79756069 | None:intergenic |
GATGACGTTGGGTTGGTATT+CGG | 0.370561 | 7:-79755094 | MsG0780040597.01.T01:CDS |
TTGTGCAGAGGTGGAGATTT+GGG | 0.380571 | 7:-79755340 | MsG0780040597.01.T01:CDS |
CGAGGATTAGTAAGGAGGTT+GGG | 0.381108 | 7:-79755430 | MsG0780040597.01.T01:CDS |
GCAGAATAATGTTAATGTTC+CGG | 0.396349 | 7:-79755630 | MsG0780040597.01.T01:CDS |
GGTTAAGAAGCCGGCGGCTC+AGG | 0.396754 | 7:-79755660 | MsG0780040597.01.T01:CDS |
CCGATGTACCTGAGGAAGAT+AGG | 0.412013 | 7:-79753915 | MsG0780040597.01.T01:intron |
CTGATGAGGATCCTGATGTT+AGG | 0.418634 | 7:-79755823 | MsG0780040597.01.T01:CDS |
TGAAGGGAATTCGTTGTTGA+AGG | 0.423056 | 7:-79755888 | MsG0780040597.01.T01:CDS |
GCATTCTCATCAGAAATATA+CGG | 0.424227 | 7:+79755845 | None:intergenic |
ATCCTTCGCTTCACCTTCCC+AGG | 0.428288 | 7:+79755913 | None:intergenic |
TGCTTCACTGCCTGAGCCGC+CGG | 0.429850 | 7:+79755650 | None:intergenic |
CCCCTTACGGATGTTGATGT+AGG | 0.433756 | 7:+79755973 | None:intergenic |
GAAGAAGAAGGAGAGTAAGA+AGG | 0.437370 | 7:-79755558 | MsG0780040597.01.T01:CDS |
GGCGAGAGGTGGTCCTGTTA+AGG | 0.438118 | 7:-79755693 | MsG0780040597.01.T01:CDS |
ATGTTAGAATACCAATGAAC+CGG | 0.439145 | 7:+79755127 | None:intergenic |
AAGAAGAAGGAGAGTAAGAA+GGG | 0.442005 | 7:-79755557 | MsG0780040597.01.T01:CDS |
GGATTTGTTTGAGATATTGA+TGG | 0.445610 | 7:-79755489 | MsG0780040597.01.T01:CDS |
TTAGATTTGTCCCGGTTCAT+TGG | 0.450513 | 7:-79755138 | MsG0780040597.01.T01:CDS |
AGATTTGGGAGCTGGATTGA+TGG | 0.454652 | 7:-79755326 | MsG0780040597.01.T01:CDS |
GACGGAGAAGTTTAATTGTC+GGG | 0.459720 | 7:-79755516 | MsG0780040597.01.T01:CDS |
TTGTGAACGTTAGTTCCGTC+TGG | 0.461471 | 7:+79756133 | None:intergenic |
CAGGTACATCGGTATGTGTC+AGG | 0.462088 | 7:+79753926 | None:intergenic |
AGAAGGAGAGTAAGAAGGGA+AGG | 0.462970 | 7:-79755553 | MsG0780040597.01.T01:CDS |
GAAGTTTAATTGTCGGGCGA+AGG | 0.463952 | 7:-79755510 | MsG0780040597.01.T01:CDS |
TCCTGTTAAGGAGGATTTGG+AGG | 0.465113 | 7:-79755681 | MsG0780040597.01.T01:CDS |
CACCGTACGATGGCGAAATA+CGG | 0.466497 | 7:-79756190 | None:intergenic |
GGATCCTGATGTTAGGGTTA+CGG | 0.467620 | 7:-79755816 | MsG0780040597.01.T01:CDS |
GGAAGTTGATTGTGCAGAGG+TGG | 0.472069 | 7:-79755349 | MsG0780040597.01.T01:CDS |
GATTGATGGTGCTCAATCTC+AGG | 0.472231 | 7:-79755312 | MsG0780040597.01.T01:CDS |
ACAACAGTAACTCCTGGTTC+AGG | 0.472906 | 7:+79753952 | None:intergenic |
TCCTTAATCCTCCTCCCAAT+CGG | 0.476371 | 7:+79755779 | None:intergenic |
TTCTCCTCCTTCTTAACAGA+AGG | 0.482815 | 7:+79755578 | None:intergenic |
GCTGTTGTTGTCACCGTCGC+CGG | 0.485289 | 7:+79755611 | None:intergenic |
ACGGAACTAACGTTCACAAC+TGG | 0.487614 | 7:-79756129 | MsG0780040597.01.T01:CDS |
TTATAGACTATGATGACGTT+GGG | 0.493699 | 7:-79755105 | MsG0780040597.01.T01:CDS |
AATCAATCTCACTGTTTCCT+GGG | 0.495075 | 7:-79755930 | MsG0780040597.01.T01:CDS |
AGGCTTCGCCGGTGAGGCTA+CGG | 0.500973 | 7:+79755993 | None:intergenic |
TAATGCGAGGATTAGTAAGG+AGG | 0.501858 | 7:-79755435 | MsG0780040597.01.T01:CDS |
CAGGGATAATCTTCCCCTTA+CGG | 0.502173 | 7:+79755960 | None:intergenic |
AGATATTGATGGATGAGAAT+AGG | 0.505287 | 7:-79755478 | MsG0780040597.01.T01:CDS |
AGGATGCGATGTTTCAGAAA+GGG | 0.510988 | 7:-79755760 | MsG0780040597.01.T01:CDS |
GAGTAATGCGAGGATTAGTA+AGG | 0.514457 | 7:-79755438 | MsG0780040597.01.T01:CDS |
TAATGTTAATGTTCCGGCGA+CGG | 0.516023 | 7:-79755624 | MsG0780040597.01.T01:CDS |
AGAGGTGGAGATTTGGGAGC+TGG | 0.516104 | 7:-79755334 | MsG0780040597.01.T01:CDS |
GAGGATTAGTAAGGAGGTTG+GGG | 0.520662 | 7:-79755429 | MsG0780040597.01.T01:CDS |
ATGGATGAGAATAGGTGGAA+GGG | 0.522678 | 7:-79755470 | MsG0780040597.01.T01:CDS |
CGTAAGGGGAAGATTATCCC+TGG | 0.522864 | 7:-79755959 | MsG0780040597.01.T01:CDS |
ATTATAGACTATGATGACGT+TGG | 0.526965 | 7:-79755106 | MsG0780040597.01.T01:CDS |
GGATTTGGAGGTTAAGAAGC+CGG | 0.527030 | 7:-79755669 | MsG0780040597.01.T01:CDS |
GTCAAGTCCTTCTGTTAAGA+AGG | 0.528667 | 7:-79755585 | MsG0780040597.01.T01:CDS |
TAAGAAGGAGGAGAAGAAGA+AGG | 0.529157 | 7:-79755570 | MsG0780040597.01.T01:CDS |
GATGTTAGTTAGATTTGTCC+CGG | 0.529968 | 7:-79755146 | MsG0780040597.01.T01:CDS |
CTAACGTTCACAACTGGCAC+TGG | 0.530672 | 7:-79756123 | MsG0780040597.01.T01:CDS |
AGACTATGATGACGTTGGGT+TGG | 0.534694 | 7:-79755101 | MsG0780040597.01.T01:CDS |
GCGAGGATTAGTAAGGAGGT+TGG | 0.536552 | 7:-79755431 | MsG0780040597.01.T01:CDS |
GATGTTGATGTAGGCTTCGC+CGG | 0.537363 | 7:+79755982 | None:intergenic |
AATCTCACTGTTTCCTGGGA+AGG | 0.538242 | 7:-79755926 | MsG0780040597.01.T01:CDS |
TGTGGTGGAGAACACTGAAA+GGG | 0.538891 | 7:-79753792 | MsG0780040597.01.T01:CDS |
AAGGAAGAATATTGTGATGA+CGG | 0.539210 | 7:-79755534 | MsG0780040597.01.T01:CDS |
TGACGGAGAAGTTTAATTGT+CGG | 0.541011 | 7:-79755517 | MsG0780040597.01.T01:CDS |
TTGAAGATGAAAGTCCGATT+GGG | 0.541854 | 7:-79755793 | MsG0780040597.01.T01:CDS |
CGGAGACAAACTGTCTAGAA+TGG | 0.546185 | 7:-79756099 | MsG0780040597.01.T01:CDS |
GGATGGTGAGATTGGAGAGA+AGG | 0.546910 | 7:+79756056 | None:intergenic |
GATGGATGAGAATAGGTGGA+AGG | 0.547723 | 7:-79755471 | MsG0780040597.01.T01:CDS |
GTTGAAGATGAAAGTCCGAT+TGG | 0.549226 | 7:-79755794 | MsG0780040597.01.T01:CDS |
GTTACCTTCGCCGTTGAGGA+TGG | 0.556749 | 7:+79756039 | None:intergenic |
AGAACACTGAAAGGGGATGG+AGG | 0.557325 | 7:-79753784 | MsG0780040597.01.T01:CDS |
CTGTGGTGGAGAACACTGAA+AGG | 0.557979 | 7:-79753793 | MsG0780040597.01.T01:CDS |
GAACACTGAAAGGGGATGGA+GGG | 0.559482 | 7:-79753783 | MsG0780040597.01.T01:CDS |
AATACTAACCTATCTTCCTC+AGG | 0.560053 | 7:+79753907 | None:intergenic |
AAGGATGCGATGTTTCAGAA+AGG | 0.560413 | 7:-79755761 | MsG0780040597.01.T01:CDS |
AGCCTACATCAACATCCGTA+AGG | 0.561299 | 7:-79755975 | MsG0780040597.01.T01:CDS |
TATTGATGGATGAGAATAGG+TGG | 0.562657 | 7:-79755475 | MsG0780040597.01.T01:CDS |
AGGTTTACAACAGTAACTCC+TGG | 0.563635 | 7:+79753946 | None:intergenic |
ATGAAAGTCCGATTGGGAGG+AGG | 0.565459 | 7:-79755787 | MsG0780040597.01.T01:CDS |
GGTGAAGCGAAGGATAATGA+AGG | 0.566763 | 7:-79755905 | MsG0780040597.01.T01:CDS |
TTGAATACTGAAAATTGCAA+TGG | 0.568087 | 7:-79753640 | MsG0780040597.01.T01:three_prime_UTR |
GCGATGTTTCAGAAAGGGAA+GGG | 0.570524 | 7:-79755755 | MsG0780040597.01.T01:CDS |
GCAATGTGGAGTTGCAAGAA+GGG | 0.570659 | 7:-79755370 | MsG0780040597.01.T01:CDS |
TGGAGAACACTGAAAGGGGA+TGG | 0.571952 | 7:-79753787 | MsG0780040597.01.T01:CDS |
TACATTATCTTTATTACTGT+AGG | 0.571983 | 7:-79753610 | MsG0780040597.01.T01:three_prime_UTR |
GGTGAGATTGGAGAGAAGGT+TGG | 0.574769 | 7:+79756060 | None:intergenic |
AGCAATGTGGAGTTGCAAGA+AGG | 0.575330 | 7:-79755371 | MsG0780040597.01.T01:CDS |
TCAACCGTAACCCTAACATC+AGG | 0.576029 | 7:+79755812 | None:intergenic |
TGATGAGGATCCTGATGTTA+GGG | 0.576854 | 7:-79755822 | MsG0780040597.01.T01:CDS |
CGATGTTTCAGAAAGGGAAG+GGG | 0.576926 | 7:-79755754 | MsG0780040597.01.T01:CDS |
CTCACCATCCTCAACGGCGA+AGG | 0.582871 | 7:-79756043 | MsG0780040597.01.T01:CDS |
GCCTACATCAACATCCGTAA+GGG | 0.584822 | 7:-79755974 | MsG0780040597.01.T01:CDS |
TCCAATCTCACCATCCTCAA+CGG | 0.585506 | 7:-79756049 | MsG0780040597.01.T01:CDS |
TGGGTTGGTATTCGGTAATG+TGG | 0.590119 | 7:-79755086 | MsG0780040597.01.T01:intron |
AGAGGTTACCTTCGCCGTTG+AGG | 0.594117 | 7:+79756035 | None:intergenic |
TGCGATGTTTCAGAAAGGGA+AGG | 0.595442 | 7:-79755756 | MsG0780040597.01.T01:CDS |
TGAGATTGATTTCATACCCA+GGG | 0.595629 | 7:+79755942 | None:intergenic |
CCTATCTTCCTCAGGTACAT+CGG | 0.599844 | 7:+79753915 | None:intergenic |
ATCGTTGAAGAACGTCCAGA+CGG | 0.600203 | 7:-79756148 | MsG0780040597.01.T01:CDS |
ACTACTCTCCGTAGCCTCAC+CGG | 0.601939 | 7:-79756001 | MsG0780040597.01.T01:CDS |
TGGGTTGATAGTATGGCGAG+AGG | 0.616427 | 7:-79755707 | MsG0780040597.01.T01:CDS |
AAGATGAAAGTCCGATTGGG+AGG | 0.618852 | 7:-79755790 | MsG0780040597.01.T01:CDS |
GAGAGGTGGTCCTGTTAAGG+AGG | 0.620858 | 7:-79755690 | MsG0780040597.01.T01:CDS |
CGTTCACAACTGGCACTGGT+CGG | 0.625893 | 7:-79756119 | MsG0780040597.01.T01:CDS |
GGTGCTCAATCTCAGGTATG+TGG | 0.631504 | 7:-79755305 | MsG0780040597.01.T01:CDS |
GTGAAGCGAAGGATAATGAA+GGG | 0.634620 | 7:-79755904 | MsG0780040597.01.T01:CDS |
GTGAGATTGATTTCATACCC+AGG | 0.635538 | 7:+79755941 | None:intergenic |
TTCCTGGGAAGGTGAAGCGA+AGG | 0.635710 | 7:-79755915 | MsG0780040597.01.T01:CDS |
GGTGAGGCTACGGAGAGTAG+TGG | 0.639392 | 7:+79756003 | None:intergenic |
GTTGATAGTATGGCGAGAGG+TGG | 0.642074 | 7:-79755704 | MsG0780040597.01.T01:CDS |
TTCTGATGAGAATGCTGATG+AGG | 0.643664 | 7:-79755837 | MsG0780040597.01.T01:CDS |
AAGTCCTTCTGTTAAGAAGG+AGG | 0.644149 | 7:-79755582 | MsG0780040597.01.T01:CDS |
TGATGTAGGCTTCGCCGGTG+AGG | 0.647107 | 7:+79755987 | None:intergenic |
ACGGCGAAGGTGATAAACGA+TGG | 0.652154 | 7:-79756171 | MsG0780040597.01.T01:CDS |
TGTTAGAATACCAATGAACC+GGG | 0.654028 | 7:+79755128 | None:intergenic |
CCTACATCAACATCCGTAAG+GGG | 0.655539 | 7:-79755973 | MsG0780040597.01.T01:CDS |
GACACATACCGATGTACCTG+AGG | 0.657140 | 7:-79753923 | MsG0780040597.01.T01:CDS |
GTATGGGAATGCTACTGTGG+TGG | 0.667144 | 7:-79753807 | MsG0780040597.01.T01:CDS |
GTAAGGGGAAGATTATCCCT+GGG | 0.667636 | 7:-79755958 | MsG0780040597.01.T01:CDS |
ACGATGGCGAAATACGGCGA+AGG | 0.671334 | 7:-79756184 | MsG0780040597.01.T01:CDS |
AAGGGAAGTTGATTGTGCAG+AGG | 0.679090 | 7:-79755352 | MsG0780040597.01.T01:CDS |
CAGGTATGGGAATGCTACTG+TGG | 0.679562 | 7:-79753810 | MsG0780040597.01.T01:CDS |
TTTGGAGGTTAAGAAGCCGG+CGG | 0.691214 | 7:-79755666 | MsG0780040597.01.T01:CDS |
GTCTGTCACTGGAAGCAATG+TGG | 0.701493 | 7:-79755384 | MsG0780040597.01.T01:CDS |
AGGATTAGTAAGGAGGTTGG+GGG | 0.725145 | 7:-79755428 | MsG0780040597.01.T01:CDS |
GTGGTGGAGAACACTGAAAG+GGG | 0.728002 | 7:-79753791 | MsG0780040597.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATATATATGATGTCA+TGG | - | Chr7:79755584-79755603 | MsG0780040597.01.T01:CDS | 15.0% |
!! | AATCTAATTGAATAATGTTA+GGG | - | Chr7:79755241-79755260 | MsG0780040597.01.T01:intron | 15.0% |
!! | ATAAGTAAATAAATAATGCT+AGG | - | Chr7:79754866-79754885 | MsG0780040597.01.T01:intron | 15.0% |
!!! | AGGTTAGTATTTTAAATATT+GGG | - | Chr7:79755851-79755870 | MsG0780040597.01.T01:CDS | 15.0% |
!!! | TAGGTTAGTATTTTAAATAT+TGG | - | Chr7:79755850-79755869 | MsG0780040597.01.T01:CDS | 15.0% |
!!! | TGACATCATATATATTTTTT+AGG | + | Chr7:79755584-79755603 | None:intergenic | 15.0% |
!!! | TTTTTATAAGGAAAGATTAA+TGG | - | Chr7:79756076-79756095 | MsG0780040597.01.T01:CDS | 15.0% |
!! | AATGTTTATGTTATCTTTCT+GGG | - | Chr7:79755883-79755902 | MsG0780040597.01.T01:CDS | 20.0% |
!! | ATAACAAATAGTATTCACTT+CGG | + | Chr7:79755467-79755486 | None:intergenic | 20.0% |
!! | GAATCTAATTGAATAATGTT+AGG | - | Chr7:79755240-79755259 | MsG0780040597.01.T01:intron | 20.0% |
!! | TAATGAGTAAATACTCAAAT+TGG | - | Chr7:79754930-79754949 | MsG0780040597.01.T01:intron | 20.0% |
!! | TACATTATCTTTATTACTGT+AGG | - | Chr7:79756136-79756155 | MsG0780040597.01.T01:CDS | 20.0% |
!!! | AATCAAATTTTTCTTTTCCT+TGG | - | Chr7:79755040-79755059 | MsG0780040597.01.T01:intron | 20.0% |
!!! | ATTTTGAAAAAAGTCATCAA+TGG | + | Chr7:79755619-79755638 | None:intergenic | 20.0% |
!!! | TAAAGTTGATATATCATGAA+TGG | - | Chr7:79755213-79755232 | MsG0780040597.01.T01:intron | 20.0% |
!!! | TGCAGATTTTGATTTTTATA+AGG | - | Chr7:79756064-79756083 | MsG0780040597.01.T01:CDS | 20.0% |
!!! | TTTTAAATATTGGGAATGAT+TGG | - | Chr7:79755860-79755879 | MsG0780040597.01.T01:CDS | 20.0% |
! | AATTGGTACTTGAAATTGTA+AGG | - | Chr7:79754947-79754966 | MsG0780040597.01.T01:intron | 25.0% |
! | AGACTATAATTGCATTAAGT+TGG | - | Chr7:79754820-79754839 | MsG0780040597.01.T01:intron | 25.0% |
! | ATAAAATCTCGATAATCTGA+GGG | + | Chr7:79754988-79755007 | None:intergenic | 25.0% |
! | ATCAATTATAATAGCAACGA+GGG | + | Chr7:79755498-79755517 | None:intergenic | 25.0% |
! | ATTAACGTAATGATGCATAA+TGG | - | Chr7:79755737-79755756 | MsG0780040597.01.T01:CDS | 25.0% |
! | GAATGTTTATGTTATCTTTC+TGG | - | Chr7:79755882-79755901 | MsG0780040597.01.T01:CDS | 25.0% |
! | GTTAATATACGAGACAAAAT+TGG | + | Chr7:79754509-79754528 | None:intergenic | 25.0% |
! | TATAAAATCTCGATAATCTG+AGG | + | Chr7:79754989-79755008 | None:intergenic | 25.0% |
! | TATCAATTATAATAGCAACG+AGG | + | Chr7:79755499-79755518 | None:intergenic | 25.0% |
! | TCAGTGTATAAGACTAAATT+GGG | + | Chr7:79754749-79754768 | None:intergenic | 25.0% |
! | TGAGTATTTACTCATTAATC+AGG | + | Chr7:79754927-79754946 | None:intergenic | 25.0% |
! | TTAAATGTTGTTGTGTTGAA+TGG | - | Chr7:79755646-79755665 | MsG0780040597.01.T01:CDS | 25.0% |
! | TTGAATACTGAAAATTGCAA+TGG | - | Chr7:79756106-79756125 | MsG0780040597.01.T01:CDS | 25.0% |
!! | GTTAGTTTATAAGTTGAGTA+GGG | - | Chr7:79754707-79754726 | MsG0780040597.01.T01:intron | 25.0% |
!! | TGTTAGTTTATAAGTTGAGT+AGG | - | Chr7:79754706-79754725 | MsG0780040597.01.T01:intron | 25.0% |
!!! | GTGAGTTTAGTATTTTTGAT+GGG | - | Chr7:79754340-79754359 | MsG0780040597.01.T01:intron | 25.0% |
AAGGAAGAATATTGTGATGA+CGG | - | Chr7:79754212-79754231 | MsG0780040597.01.T01:intron | 30.0% | |
AATTCGTTGTTGAAGGTTAA+TGG | - | Chr7:79753865-79753884 | MsG0780040597.01.T01:intron | 30.0% | |
ATCCTACAATAAAATGTACC+GGG | + | Chr7:79754583-79754602 | None:intergenic | 30.0% | |
ATGTTAGAATACCAATGAAC+CGG | + | Chr7:79754622-79754641 | None:intergenic | 30.0% | |
CAATGAGTAAATATCGAAGT+TGG | + | Chr7:79755381-79755400 | None:intergenic | 30.0% | |
CATCCTACAATAAAATGTAC+CGG | + | Chr7:79754584-79754603 | None:intergenic | 30.0% | |
GATTGGTACTTGAAATTGTA+TGG | - | Chr7:79755073-79755092 | MsG0780040597.01.T01:intron | 30.0% | |
GCAGAATAATGTTAATGTTC+CGG | - | Chr7:79754116-79754135 | MsG0780040597.01.T01:intron | 30.0% | |
GCATTCTCATCAGAAATATA+CGG | + | Chr7:79753904-79753923 | None:intergenic | 30.0% | |
GTCAGTGTATAAGACTAAAT+TGG | + | Chr7:79754750-79754769 | None:intergenic | 30.0% | |
TCAATTATAATAGCAACGAG+GGG | + | Chr7:79755497-79755516 | None:intergenic | 30.0% | |
! | AGATATTGATGGATGAGAAT+AGG | - | Chr7:79754268-79754287 | MsG0780040597.01.T01:intron | 30.0% |
! | ATTATAGACTATGATGACGT+TGG | - | Chr7:79754640-79754659 | MsG0780040597.01.T01:intron | 30.0% |
! | GGATTTGTTTGAGATATTGA+TGG | - | Chr7:79754257-79754276 | MsG0780040597.01.T01:intron | 30.0% |
! | TAGTATCGAATCTCGATAAT+TGG | + | Chr7:79755118-79755137 | None:intergenic | 30.0% |
! | TGGTTTTCTTATACAGGTAT+GGG | - | Chr7:79755923-79755942 | MsG0780040597.01.T01:CDS | 30.0% |
! | TTATAGACTATGATGACGTT+GGG | - | Chr7:79754641-79754660 | MsG0780040597.01.T01:intron | 30.0% |
!! | GGTGAGTTTAGTATTTTTGA+TGG | - | Chr7:79754339-79754358 | MsG0780040597.01.T01:intron | 30.0% |
!! | TTCTAGAATGTTCGTTAGAT+TGG | - | Chr7:79754774-79754793 | MsG0780040597.01.T01:intron | 30.0% |
!! | TTGGTTTTCTTATACAGGTA+TGG | - | Chr7:79755922-79755941 | MsG0780040597.01.T01:CDS | 30.0% |
!!! | GCATAATGGTTTATTTTTGC+AGG | - | Chr7:79755751-79755770 | MsG0780040597.01.T01:CDS | 30.0% |
!!! | TATGGTTGGTTTTCTTATAC+AGG | - | Chr7:79755917-79755936 | MsG0780040597.01.T01:CDS | 30.0% |
AAATCAATCTCACTGTTTCC+TGG | - | Chr7:79753815-79753834 | MsG0780040597.01.T01:intron | 35.0% | |
AAGAAGAAGGAGAGTAAGAA+GGG | - | Chr7:79754189-79754208 | MsG0780040597.01.T01:intron | 35.0% | |
AATACTAACCTATCTTCCTC+AGG | + | Chr7:79755842-79755861 | None:intergenic | 35.0% | |
AATCAATCTCACTGTTTCCT+GGG | - | Chr7:79753816-79753835 | MsG0780040597.01.T01:intron | 35.0% | |
ACTTCGGTCTATGGAATTAT+AGG | + | Chr7:79755451-79755470 | None:intergenic | 35.0% | |
ATAGTATTCACTTCGGTCTA+TGG | + | Chr7:79755460-79755479 | None:intergenic | 35.0% | |
ATCGAATCTCGATAATTGGA+GGG | + | Chr7:79755114-79755133 | None:intergenic | 35.0% | |
CAATTATAATAGCAACGAGG+GGG | + | Chr7:79755496-79755515 | None:intergenic | 35.0% | |
CTAGTCCTTGCAAATACTAA+GGG | + | Chr7:79755185-79755204 | None:intergenic | 35.0% | |
GATGTTAGTTAGATTTGTCC+CGG | - | Chr7:79754562-79754581 | MsG0780040597.01.T01:intron | 35.0% | |
TATCGAATCTCGATAATTGG+AGG | + | Chr7:79755115-79755134 | None:intergenic | 35.0% | |
TCCTAGAGAATTCAGACATA+GGG | - | Chr7:79755271-79755290 | MsG0780040597.01.T01:intron | 35.0% | |
TCTAGTCCTTGCAAATACTA+AGG | + | Chr7:79755186-79755205 | None:intergenic | 35.0% | |
TGACGGAGAAGTTTAATTGT+CGG | - | Chr7:79754229-79754248 | MsG0780040597.01.T01:intron | 35.0% | |
TGATAACAGATCCAGACATA+GGG | - | Chr7:79754896-79754915 | MsG0780040597.01.T01:intron | 35.0% | |
TGATACACCTTACAATTTCG+AGG | - | Chr7:79755354-79755373 | MsG0780040597.01.T01:CDS | 35.0% | |
TGGTACTTGAAATTGTAAGG+AGG | - | Chr7:79754950-79754969 | MsG0780040597.01.T01:intron | 35.0% | |
TGGTACTTGAAATTGTATGG+TGG | - | Chr7:79755076-79755095 | MsG0780040597.01.T01:intron | 35.0% | |
TGTTAGAATACCAATGAACC+GGG | + | Chr7:79754621-79754640 | None:intergenic | 35.0% | |
TTCCTAGAGAATTCAGACAT+AGG | - | Chr7:79755270-79755289 | MsG0780040597.01.T01:intron | 35.0% | |
TTGAAGATGAAAGTCCGATT+GGG | - | Chr7:79753953-79753972 | MsG0780040597.01.T01:CDS | 35.0% | |
! | GTTGAGTAGGGAAATTTTGT+AGG | - | Chr7:79754719-79754738 | MsG0780040597.01.T01:intron | 35.0% |
! | TATTGATGGATGAGAATAGG+TGG | - | Chr7:79754271-79754290 | MsG0780040597.01.T01:intron | 35.0% |
! | TCTTTTCCTTGGTATTTGCA+AGG | - | Chr7:79755051-79755070 | MsG0780040597.01.T01:intron | 35.0% |
! | TGAGATTGATTTCATACCCA+GGG | + | Chr7:79753807-79753826 | None:intergenic | 35.0% |
! | TTGATAACAGATCCAGACAT+AGG | - | Chr7:79754895-79754914 | MsG0780040597.01.T01:intron | 35.0% |
!! | GCATTAAGTTGGTAATGATG+TGG | - | Chr7:79754831-79754850 | MsG0780040597.01.T01:intron | 35.0% |
!! | GTTGATTTTGGAGAAGGTTA+GGG | - | Chr7:79754014-79754033 | MsG0780040597.01.T01:intron | 35.0% |
AAGGATGCGATGTTTCAGAA+AGG | - | Chr7:79753985-79754004 | MsG0780040597.01.T01:intron | 40.0% | |
AAGTCCTTCTGTTAAGAAGG+AGG | - | Chr7:79754164-79754183 | MsG0780040597.01.T01:intron | 40.0% | |
ACCAATCCTTGCAAATACCA+AGG | + | Chr7:79755060-79755079 | None:intergenic | 40.0% | |
AGGATGCGATGTTTCAGAAA+GGG | - | Chr7:79753986-79754005 | MsG0780040597.01.T01:intron | 40.0% | |
AGGTTTACAACAGTAACTCC+TGG | + | Chr7:79755803-79755822 | None:intergenic | 40.0% | |
AGTTGGTCCTCGAAATTGTA+AGG | + | Chr7:79755364-79755383 | None:intergenic | 40.0% | |
ATGGATGAGAATAGGTGGAA+GGG | - | Chr7:79754276-79754295 | MsG0780040597.01.T01:intron | 40.0% | |
CAAAAACAGCACGTATCCTT+TGG | + | Chr7:79755999-79756018 | None:intergenic | 40.0% | |
GAAGAAGAAGGAGAGTAAGA+AGG | - | Chr7:79754188-79754207 | MsG0780040597.01.T01:intron | 40.0% | |
GACGGAGAAGTTTAATTGTC+GGG | - | Chr7:79754230-79754249 | MsG0780040597.01.T01:intron | 40.0% | |
GATAATTGGAGGGTCTAGAT+TGG | + | Chr7:79755104-79755123 | None:intergenic | 40.0% | |
GTCAAGTCCTTCTGTTAAGA+AGG | - | Chr7:79754161-79754180 | MsG0780040597.01.T01:intron | 40.0% | |
GTGAAGCGAAGGATAATGAA+GGG | - | Chr7:79753842-79753861 | MsG0780040597.01.T01:intron | 40.0% | |
GTTGAAGATGAAAGTCCGAT+TGG | - | Chr7:79753952-79753971 | MsG0780040597.01.T01:CDS | 40.0% | |
TAAGAAGGAGGAGAAGAAGA+AGG | - | Chr7:79754176-79754195 | MsG0780040597.01.T01:intron | 40.0% | |
TAATGTTAATGTTCCGGCGA+CGG | - | Chr7:79754122-79754141 | MsG0780040597.01.T01:intron | 40.0% | |
TAGTCACCAAGAAACGATCT+CGG | + | Chr7:79755323-79755342 | None:intergenic | 40.0% | |
TCCCTATGTCTGAATTCTCT+AGG | + | Chr7:79755275-79755294 | None:intergenic | 40.0% | |
TCCTTGCAAATACTAAGGGA+GGG | + | Chr7:79755181-79755200 | None:intergenic | 40.0% | |
TCCTTGGTATTTGCAAGGAT+TGG | - | Chr7:79755056-79755075 | MsG0780040597.01.T01:intron | 40.0% | |
TGAAGGGAATTCGTTGTTGA+AGG | - | Chr7:79753858-79753877 | MsG0780040597.01.T01:intron | 40.0% | |
TGATGAGGATCCTGATGTTA+GGG | - | Chr7:79753924-79753943 | MsG0780040597.01.T01:CDS | 40.0% | |
TTAGATTTGTCCCGGTTCAT+TGG | - | Chr7:79754608-79754627 | MsG0780040597.01.T01:intron | 40.0% | |
TTCTCCTCCTTCTTAACAGA+AGG | + | Chr7:79754171-79754190 | None:intergenic | 40.0% | |
TTCTGATGAGAATGCTGATG+AGG | - | Chr7:79753909-79753928 | MsG0780040597.01.T01:intron | 40.0% | |
TTTGGAGAAGGTTAGGGTTT+GGG | - | Chr7:79754020-79754039 | MsG0780040597.01.T01:intron | 40.0% | |
! | GAGTAATGCGAGGATTAGTA+AGG | - | Chr7:79754308-79754327 | MsG0780040597.01.T01:intron | 40.0% |
! | GTCCCGGTACATTTTATTGT+AGG | - | Chr7:79754578-79754597 | MsG0780040597.01.T01:intron | 40.0% |
! | GTGAGATTGATTTCATACCC+AGG | + | Chr7:79753808-79753827 | None:intergenic | 40.0% |
! | TAATGCGAGGATTAGTAAGG+AGG | - | Chr7:79754311-79754330 | MsG0780040597.01.T01:intron | 40.0% |
!! | ATTTTTGATGGGTCTGTCAC+TGG | - | Chr7:79754351-79754370 | MsG0780040597.01.T01:intron | 40.0% |
!! | GGAGGGAACTTATTTTCCAA+AGG | - | Chr7:79755980-79755999 | MsG0780040597.01.T01:CDS | 40.0% |
!! | GGTTGATTTTGGAGAAGGTT+AGG | - | Chr7:79754013-79754032 | MsG0780040597.01.T01:intron | 40.0% |
!! | TAGGGTTTGGGTTGATAGTA+TGG | - | Chr7:79754032-79754051 | MsG0780040597.01.T01:intron | 40.0% |
!! | TTCTGGGTGATTTGCTGATA+TGG | - | Chr7:79755899-79755918 | MsG0780040597.01.T01:CDS | 40.0% |
!! | TTTTGGAGAAGGTTAGGGTT+TGG | - | Chr7:79754019-79754038 | MsG0780040597.01.T01:intron | 40.0% |
!!! | ATACGTGCTGTTTTTGGCTT+TGG | - | Chr7:79756003-79756022 | MsG0780040597.01.T01:CDS | 40.0% |
!!! | CAAAGGATACGTGCTGTTTT+TGG | - | Chr7:79755997-79756016 | MsG0780040597.01.T01:CDS | 40.0% |
!!! | GAGTAGTGGTTTTGATGAAG+AGG | + | Chr7:79753732-79753751 | None:intergenic | 40.0% |
AAGATGAAAGTCCGATTGGG+AGG | - | Chr7:79753956-79753975 | MsG0780040597.01.T01:CDS | 45.0% | |
AATCTCACTGTTTCCTGGGA+AGG | - | Chr7:79753820-79753839 | MsG0780040597.01.T01:intron | 45.0% | |
ACAACAGTAACTCCTGGTTC+AGG | + | Chr7:79755797-79755816 | None:intergenic | 45.0% | |
ACCAAGAAACGATCTCGGAA+TGG | + | Chr7:79755318-79755337 | None:intergenic | 45.0% | |
ACCATTCCGAGATCGTTTCT+TGG | - | Chr7:79755314-79755333 | MsG0780040597.01.T01:CDS | 45.0% | |
ACCTCCAAATCCTCCTTAAC+AGG | + | Chr7:79754069-79754088 | None:intergenic | 45.0% | |
ACGGAACTAACGTTCACAAC+TGG | - | Chr7:79753617-79753636 | MsG0780040597.01.T01:three_prime_UTR | 45.0% | |
AGAAGGAGAGTAAGAAGGGA+AGG | - | Chr7:79754193-79754212 | MsG0780040597.01.T01:intron | 45.0% | |
AGATTTGGGAGCTGGATTGA+TGG | - | Chr7:79754420-79754439 | MsG0780040597.01.T01:intron | 45.0% | |
AGCAATGTGGAGTTGCAAGA+AGG | - | Chr7:79754375-79754394 | MsG0780040597.01.T01:intron | 45.0% | |
AGCCTACATCAACATCCGTA+AGG | - | Chr7:79753771-79753790 | MsG0780040597.01.T01:CDS | 45.0% | |
AGCTGATGTCGCATTAATCG+TGG | - | Chr7:79755531-79755550 | MsG0780040597.01.T01:CDS | 45.0% | |
ATCAGGTTCATCCCTATGTC+TGG | + | Chr7:79754910-79754929 | None:intergenic | 45.0% | |
ATCGTTGAAGAACGTCCAGA+CGG | - | Chr7:79753598-79753617 | MsG0780040597.01.T01:three_prime_UTR | 45.0% | |
ATTGTGCAGAGGTGGAGATT+TGG | - | Chr7:79754405-79754424 | MsG0780040597.01.T01:intron | 45.0% | |
CAGGGATAATCTTCCCCTTA+CGG | + | Chr7:79753789-79753808 | None:intergenic | 45.0% | |
CCTACATCAACATCCGTAAG+GGG | - | Chr7:79753773-79753792 | MsG0780040597.01.T01:CDS | 45.0% | |
CCTATCTTCCTCAGGTACAT+CGG | + | Chr7:79755834-79755853 | None:intergenic | 45.0% | |
CGATGTTTCAGAAAGGGAAG+GGG | - | Chr7:79753992-79754011 | MsG0780040597.01.T01:intron | 45.0% | |
CGGAGACAAACTGTCTAGAA+TGG | - | Chr7:79753647-79753666 | MsG0780040597.01.T01:three_prime_UTR | 45.0% | |
CTGATGAGGATCCTGATGTT+AGG | - | Chr7:79753923-79753942 | MsG0780040597.01.T01:CDS | 45.0% | |
GAAGTTTAATTGTCGGGCGA+AGG | - | Chr7:79754236-79754255 | MsG0780040597.01.T01:intron | 45.0% | |
GATGGATGAGAATAGGTGGA+AGG | - | Chr7:79754275-79754294 | MsG0780040597.01.T01:intron | 45.0% | |
GCAATGTGGAGTTGCAAGAA+GGG | - | Chr7:79754376-79754395 | MsG0780040597.01.T01:intron | 45.0% | |
GCCTACATCAACATCCGTAA+GGG | - | Chr7:79753772-79753791 | MsG0780040597.01.T01:CDS | 45.0% | |
GCGATGTTTCAGAAAGGGAA+GGG | - | Chr7:79753991-79754010 | MsG0780040597.01.T01:intron | 45.0% | |
GGATCCTGATGTTAGGGTTA+CGG | - | Chr7:79753930-79753949 | MsG0780040597.01.T01:CDS | 45.0% | |
GGATTTGGAGGTTAAGAAGC+CGG | - | Chr7:79754077-79754096 | MsG0780040597.01.T01:intron | 45.0% | |
GGTGAAGCGAAGGATAATGA+AGG | - | Chr7:79753841-79753860 | MsG0780040597.01.T01:intron | 45.0% | |
GTAAGGGGAAGATTATCCCT+GGG | - | Chr7:79753788-79753807 | MsG0780040597.01.T01:CDS | 45.0% | |
GTCCTTGCAAATACTAAGGG+AGG | + | Chr7:79755182-79755201 | None:intergenic | 45.0% | |
TCAACCGTAACCCTAACATC+AGG | + | Chr7:79753937-79753956 | None:intergenic | 45.0% | |
TCCAATCTCACCATCCTCAA+CGG | - | Chr7:79753697-79753716 | MsG0780040597.01.T01:three_prime_UTR | 45.0% | |
TCCCTCCCTTAGTATTTGCA+AGG | - | Chr7:79755177-79755196 | MsG0780040597.01.T01:intron | 45.0% | |
TCCTGTTAAGGAGGATTTGG+AGG | - | Chr7:79754065-79754084 | MsG0780040597.01.T01:intron | 45.0% | |
TCCTTAATCCTCCTCCCAAT+CGG | + | Chr7:79753970-79753989 | None:intergenic | 45.0% | |
TGCGATGTTTCAGAAAGGGA+AGG | - | Chr7:79753990-79754009 | MsG0780040597.01.T01:intron | 45.0% | |
TGGTCCTGTTAAGGAGGATT+TGG | - | Chr7:79754062-79754081 | MsG0780040597.01.T01:intron | 45.0% | |
TTGTGAACGTTAGTTCCGTC+TGG | + | Chr7:79753616-79753635 | None:intergenic | 45.0% | |
TTGTGCAGAGGTGGAGATTT+GGG | - | Chr7:79754406-79754425 | MsG0780040597.01.T01:intron | 45.0% | |
! | AAGGGAAGTTGATTGTGCAG+AGG | - | Chr7:79754394-79754413 | MsG0780040597.01.T01:intron | 45.0% |
! | AGACTATGATGACGTTGGGT+TGG | - | Chr7:79754645-79754664 | MsG0780040597.01.T01:intron | 45.0% |
! | AGGATTAGTAAGGAGGTTGG+GGG | - | Chr7:79754318-79754337 | MsG0780040597.01.T01:intron | 45.0% |
! | CGAGGATTAGTAAGGAGGTT+GGG | - | Chr7:79754316-79754335 | MsG0780040597.01.T01:intron | 45.0% |
! | GAGATCGTTTCTTGGTGACT+AGG | - | Chr7:79755322-79755341 | MsG0780040597.01.T01:CDS | 45.0% |
! | GAGGATTAGTAAGGAGGTTG+GGG | - | Chr7:79754317-79754336 | MsG0780040597.01.T01:intron | 45.0% |
! | GTTTTACGCAGAGTAATGCG+AGG | - | Chr7:79754298-79754317 | MsG0780040597.01.T01:intron | 45.0% |
! | TGTGGTGGAGAACACTGAAA+GGG | - | Chr7:79755954-79755973 | MsG0780040597.01.T01:CDS | 45.0% |
! | TTCTTGGTGACTAGGTTGCA+TGG | - | Chr7:79755330-79755349 | MsG0780040597.01.T01:CDS | 45.0% |
!! | GAAAGGGAAGGGGTTGATTT+TGG | - | Chr7:79754002-79754021 | MsG0780040597.01.T01:intron | 45.0% |
!! | GAAGGGGTTGATTTTGGAGA+AGG | - | Chr7:79754008-79754027 | MsG0780040597.01.T01:intron | 45.0% |
!! | GATGACGTTGGGTTGGTATT+CGG | - | Chr7:79754652-79754671 | MsG0780040597.01.T01:intron | 45.0% |
!! | GATTGATGGTGCTCAATCTC+AGG | - | Chr7:79754434-79754453 | MsG0780040597.01.T01:intron | 45.0% |
!! | GGGTGATTTGCTGATATGGT+TGG | - | Chr7:79755903-79755922 | MsG0780040597.01.T01:CDS | 45.0% |
!! | TGGGTTGGTATTCGGTAATG+TGG | - | Chr7:79754660-79754679 | MsG0780040597.01.T01:intron | 45.0% |
!!! | TTAATTTTTTACAATTTTAA+AGG | - | Chr7:79755402-79755421 | MsG0780040597.01.T01:CDS | 5.0% |
ACGGCGAAGGTGATAAACGA+TGG | - | Chr7:79753575-79753594 | MsG0780040597.01.T01:three_prime_UTR | 50.0% | |
AGAACACTGAAAGGGGATGG+AGG | - | Chr7:79755962-79755981 | MsG0780040597.01.T01:CDS | 50.0% | |
ATGAAAGTCCGATTGGGAGG+AGG | - | Chr7:79753959-79753978 | MsG0780040597.01.T01:CDS | 50.0% | |
CAGGTACATCGGTATGTGTC+AGG | + | Chr7:79755823-79755842 | None:intergenic | 50.0% | |
CAGGTATGGGAATGCTACTG+TGG | - | Chr7:79755936-79755955 | MsG0780040597.01.T01:CDS | 50.0% | |
CCCCTTACGGATGTTGATGT+AGG | + | Chr7:79753776-79753795 | None:intergenic | 50.0% | |
CCGATGTACCTGAGGAAGAT+AGG | - | Chr7:79755831-79755850 | MsG0780040597.01.T01:CDS | 50.0% | |
CGTAAGGGGAAGATTATCCC+TGG | - | Chr7:79753787-79753806 | MsG0780040597.01.T01:CDS | 50.0% | |
CTAACGTTCACAACTGGCAC+TGG | - | Chr7:79753623-79753642 | MsG0780040597.01.T01:three_prime_UTR | 50.0% | |
GAACACTGAAAGGGGATGGA+GGG | - | Chr7:79755963-79755982 | MsG0780040597.01.T01:CDS | 50.0% | |
GACACATACCGATGTACCTG+AGG | - | Chr7:79755823-79755842 | MsG0780040597.01.T01:CDS | 50.0% | |
GATGTTGATGTAGGCTTCGC+CGG | + | Chr7:79753767-79753786 | None:intergenic | 50.0% | |
GGATGGTGAGATTGGAGAGA+AGG | + | Chr7:79753693-79753712 | None:intergenic | 50.0% | |
GGTGAGATTGGAGAGAAGGT+TGG | + | Chr7:79753689-79753708 | None:intergenic | 50.0% | |
GGTGCTCAATCTCAGGTATG+TGG | - | Chr7:79754441-79754460 | MsG0780040597.01.T01:intron | 50.0% | |
GTATGGGAATGCTACTGTGG+TGG | - | Chr7:79755939-79755958 | MsG0780040597.01.T01:CDS | 50.0% | |
GTCTGTCACTGGAAGCAATG+TGG | - | Chr7:79754362-79754381 | MsG0780040597.01.T01:intron | 50.0% | |
TCCGATTGGGAGGAGGATTA+AGG | - | Chr7:79753966-79753985 | MsG0780040597.01.T01:CDS | 50.0% | |
TGGAGAACACTGAAAGGGGA+TGG | - | Chr7:79755959-79755978 | MsG0780040597.01.T01:CDS | 50.0% | |
TTTGGAGGTTAAGAAGCCGG+CGG | - | Chr7:79754080-79754099 | MsG0780040597.01.T01:intron | 50.0% | |
! | CTGTGGTGGAGAACACTGAA+AGG | - | Chr7:79755953-79755972 | MsG0780040597.01.T01:CDS | 50.0% |
! | GCGAGGATTAGTAAGGAGGT+TGG | - | Chr7:79754315-79754334 | MsG0780040597.01.T01:intron | 50.0% |
! | GGAAGTTGATTGTGCAGAGG+TGG | - | Chr7:79754397-79754416 | MsG0780040597.01.T01:intron | 50.0% |
! | GTGGTGGAGAACACTGAAAG+GGG | - | Chr7:79755955-79755974 | MsG0780040597.01.T01:CDS | 50.0% |
!! | GCAGGTGAGACTTGTTTTCG+AGG | - | Chr7:79755769-79755788 | MsG0780040597.01.T01:CDS | 50.0% |
!! | GGAGAGAAGGTTGGTGAAGA+AGG | + | Chr7:79753680-79753699 | None:intergenic | 50.0% |
!! | GTTGATAGTATGGCGAGAGG+TGG | - | Chr7:79754042-79754061 | MsG0780040597.01.T01:intron | 50.0% |
!! | TGGGTTGATAGTATGGCGAG+AGG | - | Chr7:79754039-79754058 | MsG0780040597.01.T01:intron | 50.0% |
ACTACTCTCCGTAGCCTCAC+CGG | - | Chr7:79753745-79753764 | MsG0780040597.01.T01:CDS | 55.0% | |
AGAGGTGGAGATTTGGGAGC+TGG | - | Chr7:79754412-79754431 | MsG0780040597.01.T01:intron | 55.0% | |
AGAGGTTACCTTCGCCGTTG+AGG | + | Chr7:79753714-79753733 | None:intergenic | 55.0% | |
ATCCTTCGCTTCACCTTCCC+AGG | + | Chr7:79753836-79753855 | None:intergenic | 55.0% | |
GAGAGGTGGTCCTGTTAAGG+AGG | - | Chr7:79754056-79754075 | MsG0780040597.01.T01:intron | 55.0% | |
GCCGTTGAGGATGGTGAGAT+TGG | + | Chr7:79753701-79753720 | None:intergenic | 55.0% | |
GTTACCTTCGCCGTTGAGGA+TGG | + | Chr7:79753710-79753729 | None:intergenic | 55.0% | |
TTCCTGGGAAGGTGAAGCGA+AGG | - | Chr7:79753831-79753850 | MsG0780040597.01.T01:intron | 55.0% | |
!! | CGTTCACAACTGGCACTGGT+CGG | - | Chr7:79753627-79753646 | MsG0780040597.01.T01:three_prime_UTR | 55.0% |
!! | GTTTTCGAGGAGCCTGAACC+AGG | - | Chr7:79755782-79755801 | MsG0780040597.01.T01:CDS | 55.0% |
CTCACCATCCTCAACGGCGA+AGG | - | Chr7:79753703-79753722 | MsG0780040597.01.T01:three_prime_UTR | 60.0% | |
GCTGTTGTTGTCACCGTCGC+CGG | + | Chr7:79754138-79754157 | None:intergenic | 60.0% | |
GGCGAGAGGTGGTCCTGTTA+AGG | - | Chr7:79754053-79754072 | MsG0780040597.01.T01:intron | 60.0% | |
GGTGAGGCTACGGAGAGTAG+TGG | + | Chr7:79753746-79753765 | None:intergenic | 60.0% | |
TGATGTAGGCTTCGCCGGTG+AGG | + | Chr7:79753762-79753781 | None:intergenic | 60.0% | |
AGGCTTCGCCGGTGAGGCTA+CGG | + | Chr7:79753756-79753775 | None:intergenic | 65.0% | |
GGTTAAGAAGCCGGCGGCTC+AGG | - | Chr7:79754086-79754105 | MsG0780040597.01.T01:intron | 65.0% | |
TGCTTCACTGCCTGAGCCGC+CGG | + | Chr7:79754099-79754118 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 79753565 | 79756203 | 79753565 | ID=MsG0780040597.01;Name=MsG0780040597.01 |
Chr7 | mRNA | 79753565 | 79756203 | 79753565 | ID=MsG0780040597.01.T01;Parent=MsG0780040597.01;Name=MsG0780040597.01.T01;_AED=0.35;_eAED=0.40;_QI=0|0.33|0.5|1|1|1|4|171|390 |
Chr7 | exon | 79753565 | 79753829 | 79753565 | ID=MsG0780040597.01.T01:exon:16567;Parent=MsG0780040597.01.T01 |
Chr7 | exon | 79753916 | 79753995 | 79753916 | ID=MsG0780040597.01.T01:exon:16566;Parent=MsG0780040597.01.T01 |
Chr7 | exon | 79755087 | 79755168 | 79755087 | ID=MsG0780040597.01.T01:exon:16565;Parent=MsG0780040597.01.T01 |
Chr7 | exon | 79755287 | 79756203 | 79755287 | ID=MsG0780040597.01.T01:exon:16564;Parent=MsG0780040597.01.T01 |
Chr7 | CDS | 79755287 | 79756203 | 79755287 | ID=MsG0780040597.01.T01:cds;Parent=MsG0780040597.01.T01 |
Chr7 | CDS | 79755087 | 79755168 | 79755087 | ID=MsG0780040597.01.T01:cds;Parent=MsG0780040597.01.T01 |
Chr7 | CDS | 79753916 | 79753995 | 79753916 | ID=MsG0780040597.01.T01:cds;Parent=MsG0780040597.01.T01 |
Chr7 | CDS | 79753736 | 79753829 | 79753736 | ID=MsG0780040597.01.T01:cds;Parent=MsG0780040597.01.T01 |
Chr7 | three_prime_UTR | 79753565 | 79753735 | 79753565 | ID=MsG0780040597.01.T01:three_prime_utr;Parent=MsG0780040597.01.T01 |
Gene Sequence |
Protein sequence |