AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011065.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011065.01.T01 MTR_2g097910 98.261 115 2 0 1 115 1 115 2.58e-81 241
MsG0280011065.01.T01 MTR_3g028740 86.087 115 16 0 1 115 3 117 1.22e-70 214
MsG0280011065.01.T01 MTR_4g065017 86.087 115 13 1 1 115 1 112 1.00e-68 209
MsG0280011065.01.T01 MTR_1g085040 79.798 99 20 0 17 115 9 107 1.20e-55 177
MsG0280011065.01.T01 MTR_7g111290 79.798 99 20 0 17 115 9 107 1.85e-54 174
MsG0280011065.01.T01 MTR_4g105130 78.788 99 21 0 17 115 9 107 2.72e-54 173
MsG0280011065.01.T01 MTR_7g110830 77.778 99 22 0 17 115 9 107 6.89e-54 172
MsG0280011065.01.T01 MTR_3g077110 78.788 99 21 0 17 115 9 107 1.35e-53 171
MsG0280011065.01.T01 MTR_1g112760 76.768 99 23 0 17 115 10 108 1.83e-53 167
MsG0280011065.01.T01 MTR_2g099740 73.000 100 27 0 16 115 8 107 1.94e-52 169
MsG0280011065.01.T01 MTR_1g085640 74.747 99 25 0 17 115 9 107 5.61e-52 168
MsG0280011065.01.T01 MTR_8g017540 71.000 100 29 0 16 115 54 153 2.56e-51 166
MsG0280011065.01.T01 MTR_8g017440 72.000 100 28 0 16 115 8 107 2.68e-51 165
MsG0280011065.01.T01 MTR_8g017500 71.000 100 29 0 16 115 8 107 2.33e-50 163
MsG0280011065.01.T01 MTR_8g098860 67.000 100 33 0 16 115 8 107 6.09e-49 158
MsG0280011065.01.T01 MTR_5g010020 66.000 100 34 0 16 115 8 107 1.35e-48 158
MsG0280011065.01.T01 MTR_1g100667 71.717 99 28 0 17 115 10 108 2.33e-48 155
MsG0280011065.01.T01 MTR_8g017390 70.297 101 29 1 16 115 8 108 1.13e-47 159
MsG0280011065.01.T01 MTR_2g064160 65.000 100 35 0 16 115 7 106 3.37e-47 154
MsG0280011065.01.T01 MTR_3g097450 68.687 99 31 0 17 115 9 107 2.28e-46 151
MsG0280011065.01.T01 MTR_6g055910 66.337 101 34 0 15 115 9 109 3.16e-46 150
MsG0280011065.01.T01 MTR_8g017340 69.307 101 30 1 16 115 8 108 3.18e-46 155
MsG0280011065.01.T01 MTR_5g079670 60.000 115 37 2 1 115 1 106 1.51e-45 147
MsG0280011065.01.T01 MTR_8g095390 65.657 99 34 0 17 115 9 107 1.97e-45 149
MsG0280011065.01.T01 MTR_8g017350 68.317 101 31 1 16 115 8 108 6.23e-45 154
MsG0280011065.01.T01 MTR_2g011660 62.385 109 35 1 7 115 6 108 2.07e-44 147
MsG0280011065.01.T01 MTR_4g073420 65.657 99 34 0 17 115 9 107 3.39e-44 145
MsG0280011065.01.T01 MTR_3g074520 62.000 100 38 0 16 115 8 107 8.72e-44 146
MsG0280011065.01.T01 MTR_1g100653 60.606 99 39 0 17 115 9 107 1.36e-43 144
MsG0280011065.01.T01 MTR_4g091490 61.468 109 36 1 7 115 6 108 1.43e-43 145
MsG0280011065.01.T01 MTR_2g089450 65.000 100 35 0 16 115 8 107 1.55e-43 142
MsG0280011065.01.T01 MTR_2g089620 66.000 100 34 0 16 115 8 107 2.02e-43 144
MsG0280011065.01.T01 MTR_4g485530 60.000 115 38 2 1 115 1 107 2.06e-43 140
MsG0280011065.01.T01 MTR_7g011170 64.646 99 35 0 17 115 9 107 2.39e-43 144
MsG0280011065.01.T01 MTR_5g029840 63.542 96 35 0 20 115 12 107 1.34e-42 142
MsG0280011065.01.T01 MTR_4g082230 64.646 99 35 0 17 115 9 107 2.46e-42 144
MsG0280011065.01.T01 MTR_7g076740 62.376 101 37 1 16 115 8 108 3.63e-42 140
MsG0280011065.01.T01 MTR_6g012690 63.000 100 37 0 16 115 8 107 5.17e-42 141
MsG0280011065.01.T01 MTR_3g065440 64.646 99 35 0 16 114 8 106 6.78e-42 140
MsG0280011065.01.T01 MTR_8g020490 65.306 98 34 0 18 115 6 103 6.78e-42 139
MsG0280011065.01.T01 MTR_5g078140 64.646 99 35 0 16 114 8 106 9.77e-42 140
MsG0280011065.01.T01 MTR_4g102380 63.636 99 36 0 16 114 8 106 9.82e-42 139
MsG0280011065.01.T01 MTR_7g115650 63.542 96 35 0 20 115 12 107 1.28e-41 136
MsG0280011065.01.T01 MTR_1g043050 64.646 99 35 0 17 115 9 107 1.42e-41 138
MsG0280011065.01.T01 MTR_5g007370 63.542 96 35 0 20 115 12 107 2.19e-41 139
MsG0280011065.01.T01 MTR_1g076150 64.646 99 35 0 17 115 9 107 3.31e-41 137
MsG0280011065.01.T01 MTR_4g082290 64.646 99 35 0 17 115 9 107 4.02e-41 140
MsG0280011065.01.T01 MTR_4g478180 62.500 96 36 0 20 115 13 108 4.72e-41 139
MsG0280011065.01.T01 MTR_8g031360 61.386 101 38 1 16 115 9 109 4.94e-41 137
MsG0280011065.01.T01 MTR_1g043080 64.286 98 35 0 17 114 9 106 5.68e-41 136
MsG0280011065.01.T01 MTR_0251s0050 62.626 99 37 0 17 115 10 108 2.58e-40 135
MsG0280011065.01.T01 MTR_6g009430 53.043 115 46 1 1 115 1 107 2.81e-40 137
MsG0280011065.01.T01 MTR_4g125520 61.616 99 38 0 17 115 9 107 4.40e-40 135
MsG0280011065.01.T01 MTR_3g461490 60.204 98 39 0 17 114 9 106 6.26e-40 135
MsG0280011065.01.T01 MTR_0008s0390 63.265 98 36 0 17 114 10 107 8.46e-40 134
MsG0280011065.01.T01 MTR_4g121460 61.616 99 38 0 17 115 9 107 1.32e-39 135
MsG0280011065.01.T01 MTR_4g100720 61.616 99 38 0 17 115 10 108 1.47e-39 130
MsG0280011065.01.T01 MTR_2g089420 67.368 95 31 0 20 114 11 105 2.76e-39 136
MsG0280011065.01.T01 MTR_2g034790 61.616 99 38 0 17 115 9 107 3.46e-39 134
MsG0280011065.01.T01 MTR_8g027345 61.616 99 38 0 17 115 9 107 4.16e-39 132
MsG0280011065.01.T01 MTR_6g012180 53.913 115 45 1 1 115 1 107 4.20e-39 133
MsG0280011065.01.T01 MTR_2g067420 59.596 99 40 0 16 114 10 108 6.44e-39 133
MsG0280011065.01.T01 MTR_7g035075 54.128 109 45 1 7 115 6 109 6.67e-39 129
MsG0280011065.01.T01 MTR_7g117730 59.000 100 41 0 16 115 8 107 1.02e-38 130
MsG0280011065.01.T01 MTR_6g006030 56.311 103 45 0 13 115 7 109 1.40e-38 129
MsG0280011065.01.T01 MTR_1g110460 57.282 103 44 0 13 115 19 121 1.78e-38 131
MsG0280011065.01.T01 MTR_0008s0470 62.105 95 36 0 20 114 13 107 2.17e-38 130
MsG0280011065.01.T01 MTR_7g096930 60.606 99 39 0 17 115 9 107 4.23e-38 129
MsG0280011065.01.T01 MTR_3g083540 59.000 100 41 0 16 115 37 136 5.07e-38 130
MsG0280011065.01.T01 MTR_1g086510 59.000 100 41 0 16 115 17 116 7.21e-38 129
MsG0280011065.01.T01 MTR_1g086530 60.417 96 38 0 20 115 33 128 7.57e-38 129
MsG0280011065.01.T01 MTR_7g010210 52.174 115 47 1 1 115 1 107 1.08e-37 128
MsG0280011065.01.T01 MTR_1g017000 52.475 101 47 1 16 115 8 108 1.17e-37 127
MsG0280011065.01.T01 MTR_8g042410 58.333 96 40 0 20 115 37 132 1.29e-37 133
MsG0280011065.01.T01 MTR_3g052430 58.333 96 40 0 20 115 41 136 1.36e-37 133
MsG0280011065.01.T01 MTR_7g010210 52.174 115 47 1 1 115 1 107 1.62e-37 129
MsG0280011065.01.T01 MTR_1g073170 58.416 101 42 0 15 115 15 115 1.71e-37 127
MsG0280011065.01.T01 MTR_1g045610 62.105 95 36 0 21 115 22 116 2.17e-37 127
MsG0280011065.01.T01 MTR_0140s0030 51.304 115 48 1 1 115 2 108 4.47e-37 128
MsG0280011065.01.T01 MTR_0489s0020 51.304 115 48 1 1 115 2 108 4.47e-37 128
MsG0280011065.01.T01 MTR_3g052450 55.000 100 45 0 16 115 36 135 4.76e-37 131
MsG0280011065.01.T01 MTR_5g042030 60.000 95 38 0 20 114 7 101 8.70e-37 126
MsG0280011065.01.T01 MTR_3g011610 57.292 96 41 0 20 115 37 132 1.18e-36 130
MsG0280011065.01.T01 MTR_1g062940 59.375 96 39 0 20 115 6 101 1.24e-36 124
MsG0280011065.01.T01 MTR_0008s0280 55.446 101 45 0 15 115 7 107 1.25e-36 124
MsG0280011065.01.T01 MTR_0063s0090 54.000 100 46 0 16 115 8 107 1.37e-36 124
MsG0280011065.01.T01 MTR_7g087130 51.304 115 48 1 1 115 1 107 1.99e-36 127
MsG0280011065.01.T01 MTR_3g039990 57.292 96 41 0 20 115 13 108 4.21e-36 125
MsG0280011065.01.T01 MTR_5g014990 55.446 101 44 1 16 115 8 108 6.81e-36 124
MsG0280011065.01.T01 MTR_2g095520 55.446 101 44 1 16 115 8 108 1.49e-35 124
MsG0280011065.01.T01 MTR_4g057635 54.455 101 45 1 16 115 8 108 2.80e-35 123
MsG0280011065.01.T01 MTR_1g017140 55.446 101 44 1 16 115 8 108 5.85e-35 123
MsG0280011065.01.T01 MTR_1g021230 57.292 96 41 0 20 115 57 152 1.27e-34 124
MsG0280011065.01.T01 MTR_4g097570 54.455 101 45 1 16 115 8 108 1.38e-34 121
MsG0280011065.01.T01 MTR_4g063100 54.455 101 46 0 15 115 2 102 2.81e-34 119
MsG0280011065.01.T01 MTR_3g103570 52.475 101 47 1 16 115 8 108 3.06e-34 121
MsG0280011065.01.T01 MTR_7g109320 63.636 99 36 0 17 115 9 107 4.64e-34 120
MsG0280011065.01.T01 MTR_7g111290 84.375 64 10 0 52 115 2 65 9.16e-34 120
MsG0280011065.01.T01 MTR_5g078910 56.122 98 43 0 18 115 5 102 1.00e-33 119
MsG0280011065.01.T01 MTR_4g128670 53.465 101 46 1 16 115 8 108 1.14e-33 120
MsG0280011065.01.T01 MTR_7g102110 51.485 101 48 1 16 115 8 108 1.96e-33 117
MsG0280011065.01.T01 MTR_6g090405 54.000 100 45 1 16 114 8 107 2.02e-33 117
MsG0280011065.01.T01 MTR_2g033170 59.375 96 39 0 20 115 24 119 2.72e-33 118
MsG0280011065.01.T01 MTR_5g079120 53.000 100 47 0 16 115 57 156 3.47e-33 117
MsG0280011065.01.T01 MTR_0247s0040 53.000 100 47 0 16 115 3 102 3.63e-33 114
MsG0280011065.01.T01 MTR_2g088170 58.333 96 40 0 20 115 29 124 3.64e-33 120
MsG0280011065.01.T01 MTR_4g097570 53.922 102 45 2 16 115 8 109 5.51e-33 117
MsG0280011065.01.T01 MTR_5g007300 57.895 95 38 1 2 96 48 140 8.86e-33 112
MsG0280011065.01.T01 MTR_8g060940 55.000 100 45 0 16 115 3 102 1.25e-32 114
MsG0280011065.01.T01 MTR_5g078800 56.250 96 42 0 20 115 7 102 1.35e-32 115
MsG0280011065.01.T01 MTR_5g079220 56.250 96 42 0 20 115 21 116 1.71e-32 115
MsG0280011065.01.T01 MTR_5g079290 54.167 96 44 0 20 115 17 112 2.59e-32 114
MsG0280011065.01.T01 MTR_2g096380 52.525 99 47 0 17 115 3 101 2.66e-32 114
MsG0280011065.01.T01 MTR_1g083630 51.429 105 51 0 11 115 3 107 2.74e-32 119
MsG0280011065.01.T01 MTR_0197s0010 57.143 91 39 0 25 115 6 96 5.28e-32 112
MsG0280011065.01.T01 MTR_5g078950 52.000 100 48 0 16 115 3 102 5.78e-32 113
MsG0280011065.01.T01 MTR_5g488170 53.125 96 44 1 21 115 13 108 6.12e-32 113
MsG0280011065.01.T01 MTR_5g088080 53.125 96 44 1 21 115 13 108 9.47e-32 113
MsG0280011065.01.T01 MTR_5g088150 53.125 96 44 1 21 115 13 108 9.47e-32 113
MsG0280011065.01.T01 MTR_5g488210 53.125 96 44 1 21 115 13 108 9.47e-32 113
MsG0280011065.01.T01 MTR_5g088640 53.125 96 44 1 21 115 13 108 1.10e-31 113
MsG0280011065.01.T01 MTR_4g123040 57.292 96 41 0 20 115 24 119 1.27e-31 114
MsG0280011065.01.T01 MTR_5g062790 54.167 96 43 1 21 115 10 105 1.64e-31 113
MsG0280011065.01.T01 MTR_0193s0090 51.000 100 49 0 16 115 3 102 1.91e-31 110
MsG0280011065.01.T01 MTR_5g078930 51.000 100 49 0 16 115 5 104 7.08e-31 109
MsG0280011065.01.T01 MTR_7g017260 51.961 102 47 1 16 115 21 122 1.02e-30 110
MsG0280011065.01.T01 MTR_0001s0360 53.125 96 45 0 20 115 7 102 1.51e-30 109
MsG0280011065.01.T01 MTR_5g078860 53.125 96 45 0 20 115 7 102 2.60e-30 110
MsG0280011065.01.T01 MTR_8g006470 47.525 101 52 1 16 115 6 106 3.64e-29 107
MsG0280011065.01.T01 MTR_6g055910 71.429 63 18 0 53 115 18 80 6.74e-28 102
MsG0280011065.01.T01 MTR_4g128190 52.525 99 33 2 18 115 9 94 1.21e-27 102
MsG0280011065.01.T01 MTR_4g029540 49.485 97 48 1 20 115 10 106 1.59e-27 102
MsG0280011065.01.T01 MTR_4g063100 63.889 72 24 1 44 115 4 73 4.95e-27 99.8
MsG0280011065.01.T01 MTR_5g088610 50.000 96 47 1 21 115 10 105 6.12e-27 102
MsG0280011065.01.T01 MTR_1g085880 54.000 100 44 2 18 115 9 108 1.92e-26 97.8
MsG0280011065.01.T01 MTR_5g049190 48.485 99 50 1 16 114 13 110 4.87e-26 97.8
MsG0280011065.01.T01 MTR_1g085770 54.000 100 44 2 18 115 9 108 1.11e-25 98.2
MsG0280011065.01.T01 MTR_3g463400 47.525 101 50 2 15 114 126 224 8.73e-25 97.4
MsG0280011065.01.T01 MTR_4g094982 52.688 93 43 1 22 114 5 96 2.00e-24 94.4
MsG0280011065.01.T01 MTR_6g027340 41.346 104 60 1 11 114 5 107 2.08e-24 92.8
MsG0280011065.01.T01 MTR_2g096380 64.062 64 23 0 52 115 19 82 2.58e-24 92.8
MsG0280011065.01.T01 MTR_5g070020 46.875 96 48 2 20 114 120 213 4.21e-24 94.7
MsG0280011065.01.T01 MTR_4g019370 52.128 94 42 2 22 114 38 129 4.89e-24 94.4
MsG0280011065.01.T01 MTR_3g045430 42.105 95 55 0 20 114 13 107 5.45e-24 93.6
MsG0280011065.01.T01 MTR_6g015455 49.462 93 46 1 22 114 5 96 7.91e-24 95.5
MsG0280011065.01.T01 MTR_6g027360 43.750 96 53 1 19 114 75 169 8.99e-24 93.2
MsG0280011065.01.T01 MTR_1g057980 43.810 105 56 2 12 114 68 171 1.41e-23 92.4
MsG0280011065.01.T01 MTR_5g016510 48.387 93 47 1 22 114 5 96 1.78e-23 92.4
MsG0280011065.01.T01 MTR_3g101290 49.505 101 50 1 14 114 29 128 2.02e-23 90.5
MsG0280011065.01.T01 MTR_6g027370 47.475 99 51 1 16 114 93 190 4.58e-23 92.0
MsG0280011065.01.T01 MTR_6g074860 48.387 93 47 1 22 114 4 95 5.44e-23 89.7
MsG0280011065.01.T01 MTR_3g077650 43.363 113 56 2 2 114 168 272 2.41e-22 90.9
MsG0280011065.01.T01 MTR_7g061330 44.792 96 52 1 19 114 110 204 4.08e-22 90.5
MsG0280011065.01.T01 MTR_7g461410 44.792 96 52 1 19 114 110 204 4.08e-22 90.5
MsG0280011065.01.T01 MTR_7g061330 44.792 96 52 1 19 114 74 168 4.09e-22 90.5
MsG0280011065.01.T01 MTR_7g035350 44.086 93 51 1 22 114 225 316 4.43e-22 90.1
MsG0280011065.01.T01 MTR_5g082910 45.794 107 56 2 8 114 6 110 4.81e-22 88.2
MsG0280011065.01.T01 MTR_7g037260 42.056 107 59 2 10 114 131 236 6.56e-22 89.0
MsG0280011065.01.T01 MTR_3g110028 44.792 96 52 1 19 114 82 176 8.59e-22 89.4
MsG0280011065.01.T01 MTR_5g041570 44.444 108 57 2 8 114 120 225 1.22e-21 88.6
MsG0280011065.01.T01 MTR_7g451170 42.056 107 59 2 10 114 177 282 2.22e-21 87.8
MsG0280011065.01.T01 MTR_4g105660 43.878 98 54 1 17 114 175 271 3.46e-21 87.4
MsG0280011065.01.T01 MTR_4g082040 47.872 94 46 2 22 114 105 196 6.22e-21 86.7
MsG0280011065.01.T01 MTR_5g010650 42.000 100 57 1 15 114 103 201 1.46e-20 85.9
MsG0280011065.01.T01 MTR_4g088015 41.935 93 53 1 22 114 221 312 1.25e-19 83.2
MsG0280011065.01.T01 MTR_0023s0210 46.914 81 43 0 16 96 3 83 3.59e-19 75.9
MsG0280011065.01.T01 MTR_1g026870 41.667 96 55 1 19 114 82 176 6.94e-19 81.3
MsG0280011065.01.T01 MTR_7g037130 39.252 107 62 2 10 114 131 236 2.27e-18 79.3
MsG0280011065.01.T01 MTR_3g089045 43.434 99 55 1 16 114 10 107 3.37e-18 78.2
MsG0280011065.01.T01 MTR_7g450950 37.736 106 59 2 9 114 150 248 4.91e-18 78.2
MsG0280011065.01.T01 MTR_7g086960 45.745 94 48 2 22 114 89 180 1.69e-17 76.6
MsG0280011065.01.T01 MTR_7g061550 41.860 86 48 1 25 108 10 95 1.52e-16 73.9
MsG0280011065.01.T01 MTR_8g017480 58.000 50 21 0 11 60 3 52 1.69e-16 68.2
MsG0280011065.01.T01 MTR_5g038910 36.893 103 63 2 13 114 16 117 2.46e-15 70.9
MsG0280011065.01.T01 MTR_5g038910 36.893 103 63 2 13 114 16 117 3.58e-15 70.5
MsG0280011065.01.T01 MTR_8g468380 32.692 104 69 1 11 114 11 113 8.45e-14 66.6
MsG0280011065.01.T01 MTR_1g008970 38.961 77 42 1 42 118 110 181 8.39e-12 60.1
MsG0280011065.01.T01 MTR_6g055910 63.158 38 14 0 78 115 2 39 4.30e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011065.01.T01 AT5G12870 80.000 115 21 1 1 115 1 113 1.50e-64 197
MsG0280011065.01.T01 AT3G08500 73.171 123 25 1 1 115 3 125 1.23e-61 192
MsG0280011065.01.T01 AT1G57560 78.788 99 21 0 17 115 9 107 4.60e-56 175
MsG0280011065.01.T01 AT1G57560 78.788 99 21 0 17 115 9 107 5.11e-56 176
MsG0280011065.01.T01 AT5G26660 80.808 99 19 0 17 115 9 107 8.58e-56 177
MsG0280011065.01.T01 AT4G01680 77.778 99 22 0 17 115 9 107 2.22e-54 170
MsG0280011065.01.T01 AT4G01680 77.778 99 22 0 17 115 9 107 2.20e-53 170
MsG0280011065.01.T01 AT3G13890 74.000 100 26 0 16 115 8 107 4.75e-53 170
MsG0280011065.01.T01 AT1G09540 75.758 99 24 0 17 115 9 107 1.10e-52 169
MsG0280011065.01.T01 AT3G13890 67.890 109 26 1 16 115 8 116 8.09e-51 164
MsG0280011065.01.T01 AT4G01680 69.369 111 22 1 17 115 9 119 7.87e-50 162
MsG0280011065.01.T01 AT1G63910 67.000 100 33 0 16 115 8 107 3.49e-48 158
MsG0280011065.01.T01 AT3G12720 65.657 99 34 0 17 115 19 117 6.26e-47 153
MsG0280011065.01.T01 AT2G16720 68.687 99 31 0 17 115 9 107 4.40e-46 150
MsG0280011065.01.T01 AT4G21440 67.677 99 32 0 17 115 9 107 1.18e-45 151
MsG0280011065.01.T01 AT4G05100 66.667 99 33 0 17 115 10 108 1.37e-45 150
MsG0280011065.01.T01 AT4G34990 66.667 99 33 0 17 115 9 107 3.84e-45 147
MsG0280011065.01.T01 AT1G22640 65.657 99 34 0 17 115 9 107 4.66e-45 147
MsG0280011065.01.T01 AT5G65230 65.625 96 33 0 20 115 12 107 2.94e-44 146
MsG0280011065.01.T01 AT4G38620 66.667 99 33 0 17 115 9 107 3.44e-44 145
MsG0280011065.01.T01 AT5G54230 67.708 96 31 0 20 115 12 107 3.48e-44 146
MsG0280011065.01.T01 AT3G48920 63.000 100 37 0 16 115 14 113 3.93e-44 144
MsG0280011065.01.T01 AT3G02940 64.583 96 34 0 20 115 12 107 4.15e-44 146
MsG0280011065.01.T01 AT4G09460 63.636 99 36 0 17 115 9 107 5.71e-44 143
MsG0280011065.01.T01 AT4G28110 64.646 99 35 0 16 114 8 106 7.32e-44 144
MsG0280011065.01.T01 AT3G02940 64.583 96 34 0 20 115 12 107 7.34e-44 145
MsG0280011065.01.T01 AT3G02940 64.583 96 34 0 20 115 12 107 7.34e-44 145
MsG0280011065.01.T01 AT3G01140 63.000 100 37 0 16 115 8 107 1.63e-43 145
MsG0280011065.01.T01 AT4G12350 65.657 99 34 0 16 114 8 106 2.11e-43 143
MsG0280011065.01.T01 AT5G15310 63.000 100 37 0 16 115 8 107 2.12e-43 142
MsG0280011065.01.T01 AT3G01140 63.000 100 37 0 16 115 51 150 4.40e-43 145
MsG0280011065.01.T01 AT5G10280 64.583 96 34 0 20 115 12 107 5.14e-43 144
MsG0280011065.01.T01 AT5G15310 63.000 100 37 0 16 115 8 107 7.12e-43 143
MsG0280011065.01.T01 AT3G61250 62.000 100 38 0 16 115 8 107 7.41e-43 142
MsG0280011065.01.T01 AT5G15310 63.000 100 37 0 16 115 8 107 8.51e-43 142
MsG0280011065.01.T01 AT5G14750 56.522 115 46 1 1 115 1 111 1.20e-42 139
MsG0280011065.01.T01 AT4G25560 68.421 95 30 0 21 115 11 105 1.22e-42 141
MsG0280011065.01.T01 AT1G34670 63.542 96 35 0 20 115 12 107 2.24e-42 143
MsG0280011065.01.T01 AT5G56110 61.616 99 38 0 17 115 9 107 3.54e-42 141
MsG0280011065.01.T01 AT5G16770 62.500 96 36 0 20 115 12 107 6.84e-42 140
MsG0280011065.01.T01 AT5G16770 62.500 96 36 0 20 115 12 107 6.84e-42 140
MsG0280011065.01.T01 AT1G66230 64.646 99 35 0 16 114 8 106 1.05e-41 139
MsG0280011065.01.T01 AT5G40330 62.105 95 36 0 21 115 13 107 1.16e-41 137
MsG0280011065.01.T01 AT5G52600 61.616 99 38 0 17 115 9 107 1.19e-41 136
MsG0280011065.01.T01 AT5G16770 62.500 96 36 0 20 115 12 107 1.23e-41 140
MsG0280011065.01.T01 AT5G16770 62.500 96 36 0 20 115 12 107 1.23e-41 140
MsG0280011065.01.T01 AT1G35515 59.596 99 40 0 17 115 9 107 1.68e-41 136
MsG0280011065.01.T01 AT4G22680 62.626 99 37 0 16 114 8 106 5.74e-41 137
MsG0280011065.01.T01 AT2G31180 63.265 98 36 0 17 114 9 106 6.33e-41 136
MsG0280011065.01.T01 AT3G01530 54.386 114 52 0 2 115 7 120 6.53e-41 135
MsG0280011065.01.T01 AT3G28470 56.140 114 42 1 1 114 1 106 6.67e-41 138
MsG0280011065.01.T01 AT5G52260 65.657 99 34 0 17 115 9 107 8.43e-41 136
MsG0280011065.01.T01 AT4G17785 62.245 98 37 0 18 115 11 108 1.46e-40 137
MsG0280011065.01.T01 AT3G27920 58.163 98 41 0 18 115 12 109 1.59e-40 134
MsG0280011065.01.T01 AT1G18570 63.542 96 35 0 20 115 13 108 1.63e-40 137
MsG0280011065.01.T01 AT4G17785 62.245 98 37 0 18 115 11 108 1.69e-40 138
MsG0280011065.01.T01 AT1G56160 60.606 99 39 0 16 114 10 108 1.86e-40 136
MsG0280011065.01.T01 AT2G47460 62.626 99 37 0 17 115 9 107 2.79e-40 137
MsG0280011065.01.T01 AT1G06180 64.646 99 35 0 17 115 9 107 3.98e-40 134
MsG0280011065.01.T01 AT3G23250 59.184 98 40 0 17 114 9 106 4.59e-40 135
MsG0280011065.01.T01 AT5G16600 62.626 99 37 0 16 114 8 106 6.78e-40 135
MsG0280011065.01.T01 AT1G79180 60.606 99 39 0 16 114 10 108 7.50e-40 134
MsG0280011065.01.T01 AT2G26960 55.556 108 48 0 8 115 8 115 8.06e-40 137
MsG0280011065.01.T01 AT5G60890 59.375 96 39 0 20 115 12 107 9.31e-40 134
MsG0280011065.01.T01 AT5G14340 62.626 99 37 0 16 114 20 118 1.10e-39 134
MsG0280011065.01.T01 AT5G49330 63.636 99 36 0 17 115 9 107 1.20e-39 135
MsG0280011065.01.T01 AT1G16490 59.596 99 40 0 16 114 10 108 1.27e-39 133
MsG0280011065.01.T01 AT5G07690 60.417 96 38 0 20 115 12 107 1.59e-39 135
MsG0280011065.01.T01 AT5G35550 60.396 101 40 0 14 114 8 108 2.34e-39 132
MsG0280011065.01.T01 AT3G62610 59.596 99 40 0 17 115 9 107 4.54e-39 134
MsG0280011065.01.T01 AT5G07700 59.375 96 39 0 20 115 12 107 4.76e-39 133
MsG0280011065.01.T01 AT5G07700 59.375 96 39 0 20 115 12 107 4.76e-39 133
MsG0280011065.01.T01 AT1G74430 62.105 95 36 0 20 114 12 106 6.09e-39 131
MsG0280011065.01.T01 AT5G61420 59.375 96 39 0 20 115 12 107 6.68e-39 134
MsG0280011065.01.T01 AT3G13540 53.509 114 51 1 2 115 7 118 9.57e-39 130
MsG0280011065.01.T01 AT3G27810 56.566 99 43 0 17 115 17 115 1.05e-38 130
MsG0280011065.01.T01 AT5G40350 57.732 97 41 0 19 115 16 112 1.20e-38 129
MsG0280011065.01.T01 AT1G68320 60.204 98 39 0 18 115 17 114 3.12e-38 130
MsG0280011065.01.T01 AT5G06100 58.333 96 40 0 20 115 32 127 4.84e-38 133
MsG0280011065.01.T01 AT1G74080 61.053 95 37 0 20 114 12 106 4.95e-38 130
MsG0280011065.01.T01 AT3G12820 57.576 99 42 0 16 114 10 108 6.25e-38 128
MsG0280011065.01.T01 AT1G48000 58.763 97 40 0 19 115 31 127 7.88e-38 128
MsG0280011065.01.T01 AT3G30210 63.158 95 35 0 21 115 28 122 9.90e-38 129
MsG0280011065.01.T01 AT5G55020 60.417 96 38 0 20 115 26 121 1.22e-37 133
MsG0280011065.01.T01 AT5G06100 58.333 96 40 0 20 115 32 127 1.34e-37 133
MsG0280011065.01.T01 AT5G06100 58.333 96 40 0 20 115 32 127 1.34e-37 133
MsG0280011065.01.T01 AT5G06100 58.333 96 40 0 20 115 32 127 1.34e-37 133
MsG0280011065.01.T01 AT5G06100 58.333 96 40 0 20 115 32 127 1.34e-37 133
MsG0280011065.01.T01 AT5G62320 59.223 103 35 1 20 115 13 115 1.84e-37 127
MsG0280011065.01.T01 AT3G24310 62.105 95 36 0 21 115 19 113 3.33e-37 127
MsG0280011065.01.T01 AT1G74650 57.576 99 42 0 17 115 9 107 3.53e-37 128
MsG0280011065.01.T01 AT3G06490 59.259 108 44 0 8 115 7 114 4.09e-37 128
MsG0280011065.01.T01 AT3G11440 50.000 112 56 0 4 115 25 136 4.36e-37 130
MsG0280011065.01.T01 AT3G11440 50.000 112 56 0 4 115 25 136 5.84e-37 131
MsG0280011065.01.T01 AT3G11440 50.000 112 56 0 4 115 25 136 5.84e-37 131
MsG0280011065.01.T01 AT3G11440 50.000 112 56 0 4 115 25 136 5.84e-37 131
MsG0280011065.01.T01 AT1G08810 51.304 115 48 1 1 115 1 107 7.36e-37 126
MsG0280011065.01.T01 AT3G28910 51.304 115 48 1 1 115 1 107 8.90e-37 127
MsG0280011065.01.T01 AT1G25340 53.636 110 51 0 6 115 4 113 1.11e-36 126
MsG0280011065.01.T01 AT3G47600 50.435 115 49 1 1 115 1 107 1.89e-36 127
MsG0280011065.01.T01 AT2G47190 57.292 96 41 0 20 115 20 115 4.03e-36 124
MsG0280011065.01.T01 AT4G13480 60.000 95 38 0 21 115 7 101 6.47e-36 124
MsG0280011065.01.T01 AT2G32460 56.250 96 42 0 20 115 18 113 1.08e-35 127
MsG0280011065.01.T01 AT2G32460 56.250 96 42 0 20 115 6 101 1.10e-35 127
MsG0280011065.01.T01 AT5G62470 50.435 115 49 1 1 115 1 107 1.17e-35 125
MsG0280011065.01.T01 AT4G26930 57.292 96 41 0 20 115 19 114 1.71e-35 125
MsG0280011065.01.T01 AT5G23000 55.446 101 44 1 16 115 8 108 3.41e-35 123
MsG0280011065.01.T01 AT5G26660 79.710 69 14 0 47 115 8 76 5.07e-35 122
MsG0280011065.01.T01 AT3G49690 55.446 101 44 1 16 115 8 108 6.43e-35 122
MsG0280011065.01.T01 AT5G57620 54.455 101 45 1 16 115 8 108 1.17e-34 122
MsG0280011065.01.T01 AT5G65790 54.455 101 45 1 16 115 8 108 1.33e-34 122
MsG0280011065.01.T01 AT5G62470 50.435 115 48 2 1 115 1 106 3.91e-34 121
MsG0280011065.01.T01 AT1G79180 46.212 132 38 1 16 114 10 141 1.06e-33 119
MsG0280011065.01.T01 AT1G18710 53.684 95 44 0 20 114 12 106 1.84e-33 117
MsG0280011065.01.T01 AT3G53200 55.556 99 44 0 17 115 6 104 1.96e-33 116
MsG0280011065.01.T01 AT5G59780 54.545 99 45 0 17 115 5 103 3.96e-33 115
MsG0280011065.01.T01 AT2G36890 51.485 101 48 1 16 115 8 108 1.24e-32 116
MsG0280011065.01.T01 AT3G46130 55.789 95 42 0 21 115 10 104 1.82e-32 114
MsG0280011065.01.T01 AT2G36890 51.485 101 48 1 16 115 49 149 2.11e-32 116
MsG0280011065.01.T01 AT1G66370 54.082 98 45 0 18 115 6 103 3.13e-32 114
MsG0280011065.01.T01 AT4G37780 50.495 101 49 1 16 115 8 108 5.72e-32 114
MsG0280011065.01.T01 AT1G25340 50.909 110 49 1 6 115 4 108 5.80e-32 114
MsG0280011065.01.T01 AT1G25340 50.909 110 49 1 6 115 4 108 8.25e-32 114
MsG0280011065.01.T01 AT5G49620 57.292 96 41 0 20 115 26 121 9.10e-32 114
MsG0280011065.01.T01 AT2G26950 48.485 99 51 0 17 115 13 111 1.53e-31 115
MsG0280011065.01.T01 AT1G66380 56.000 100 44 0 16 115 4 103 9.78e-31 107
MsG0280011065.01.T01 AT3G60460 52.000 100 47 1 17 115 8 107 3.21e-30 110
MsG0280011065.01.T01 AT5G35550 74.627 67 17 0 48 114 45 111 5.18e-29 105
MsG0280011065.01.T01 AT1G56650 56.122 98 43 0 18 115 6 103 8.70e-29 105
MsG0280011065.01.T01 AT5G14750 71.667 60 17 0 56 115 18 77 3.61e-28 101
MsG0280011065.01.T01 AT5G49620 50.000 110 41 1 20 115 26 135 6.03e-28 104
MsG0280011065.01.T01 AT1G66390 56.122 98 43 0 18 115 6 103 8.58e-28 102
MsG0280011065.01.T01 AT3G12820 72.881 59 16 0 56 114 2 60 9.27e-27 98.6
MsG0280011065.01.T01 AT5G40350 64.615 65 23 0 51 115 3 67 2.90e-26 96.7
MsG0280011065.01.T01 AT3G27810 65.079 63 22 0 53 115 4 66 4.36e-26 96.3
MsG0280011065.01.T01 AT3G53200 68.254 63 20 0 53 115 9 71 4.90e-26 97.1
MsG0280011065.01.T01 AT3G47600 52.941 85 36 1 31 115 21 101 7.31e-26 99.0
MsG0280011065.01.T01 AT3G46130 64.615 65 23 0 51 115 8 72 1.17e-25 96.3
MsG0280011065.01.T01 AT5G59780 66.667 63 21 0 53 115 20 82 2.70e-25 95.1
MsG0280011065.01.T01 AT3G46130 66.667 63 21 0 53 115 20 82 3.40e-25 95.5
MsG0280011065.01.T01 AT4G18770 46.939 98 51 1 17 114 212 308 1.12e-23 94.4
MsG0280011065.01.T01 AT3G27785 44.898 98 53 1 17 114 184 280 4.06e-23 92.8
MsG0280011065.01.T01 AT2G39880 48.598 107 52 2 9 114 37 141 4.72e-23 92.0
MsG0280011065.01.T01 AT5G40360 41.837 98 56 1 17 114 153 249 6.45e-23 91.7
MsG0280011065.01.T01 AT3G09230 51.613 93 44 1 22 114 55 146 1.85e-22 90.9
MsG0280011065.01.T01 AT5G67300 47.312 93 48 1 22 114 6 97 2.20e-22 89.4
MsG0280011065.01.T01 AT4G37260 48.387 93 47 1 22 114 13 104 3.04e-22 89.4
MsG0280011065.01.T01 AT5G58850 44.444 99 52 2 18 115 101 197 3.27e-22 90.1
MsG0280011065.01.T01 AT5G11050 42.857 98 53 2 18 114 101 196 4.26e-22 90.1
MsG0280011065.01.T01 AT1G17950 47.312 93 48 1 22 114 5 96 5.66e-22 87.4
MsG0280011065.01.T01 AT3G09370 46.316 95 50 1 20 114 133 226 5.69e-22 90.1
MsG0280011065.01.T01 AT3G09370 46.316 95 50 1 20 114 128 221 6.53e-22 89.7
MsG0280011065.01.T01 AT3G09370 46.316 95 50 1 20 114 141 234 7.51e-22 89.7
MsG0280011065.01.T01 AT1G69560 44.444 99 54 1 16 114 101 198 1.20e-21 87.8
MsG0280011065.01.T01 AT1G69560 44.444 99 54 1 16 114 117 214 1.42e-21 87.8
MsG0280011065.01.T01 AT1G22640 76.000 50 12 0 66 115 1 50 1.63e-21 85.1
MsG0280011065.01.T01 AT1G66380 64.062 64 23 0 52 115 7 70 1.84e-21 82.4
MsG0280011065.01.T01 AT5G02320 42.708 96 54 1 19 114 64 158 1.95e-21 88.2
MsG0280011065.01.T01 AT2G23290 46.237 93 49 1 22 114 13 104 2.01e-21 87.0
MsG0280011065.01.T01 AT3G55730 52.128 94 42 2 22 114 56 147 2.07e-21 87.8
MsG0280011065.01.T01 AT5G02320 42.708 96 54 1 19 114 124 218 2.08e-21 88.6
MsG0280011065.01.T01 AT5G02320 42.708 96 54 1 19 114 124 218 2.08e-21 88.6
MsG0280011065.01.T01 AT4G33450 39.091 110 66 1 5 114 2 110 3.50e-21 85.5
MsG0280011065.01.T01 AT2G25230 41.000 100 58 1 15 114 19 117 3.64e-21 85.1
MsG0280011065.01.T01 AT1G26780 46.316 95 50 1 20 114 96 189 9.01e-21 84.7
MsG0280011065.01.T01 AT1G26780 46.316 95 50 1 20 114 96 189 2.26e-20 84.7
MsG0280011065.01.T01 AT1G66380 49.425 87 44 0 16 102 4 90 2.97e-20 79.3
MsG0280011065.01.T01 AT5G17800 43.000 100 56 1 15 114 86 184 3.81e-20 83.6
MsG0280011065.01.T01 AT3G50060 45.161 93 50 1 22 114 6 97 5.56e-20 82.8
MsG0280011065.01.T01 AT5G11510 43.750 96 53 1 19 114 78 172 8.09e-20 84.0
MsG0280011065.01.T01 AT5G11510 43.750 96 53 1 19 114 78 172 8.09e-20 84.0
MsG0280011065.01.T01 AT5G11510 43.750 96 53 1 19 114 78 172 8.09e-20 84.0
MsG0280011065.01.T01 AT5G11510 43.750 96 53 1 19 114 78 172 8.43e-20 84.0
MsG0280011065.01.T01 AT3G23250 69.388 49 15 0 66 114 1 49 9.69e-20 81.3
MsG0280011065.01.T01 AT5G11510 43.750 96 53 1 19 114 78 172 9.87e-20 83.6
MsG0280011065.01.T01 AT1G73410 47.312 93 48 1 22 114 6 97 1.98e-19 79.7
MsG0280011065.01.T01 AT1G73410 47.312 93 48 1 22 114 6 97 2.53e-19 80.5
MsG0280011065.01.T01 AT5G14750 66.000 50 17 0 66 115 1 50 3.11e-19 77.8
MsG0280011065.01.T01 AT5G14750 66.000 50 17 0 66 115 1 50 3.11e-19 77.8
MsG0280011065.01.T01 AT3G29020 43.011 93 52 1 22 114 65 156 1.52e-18 78.2
MsG0280011065.01.T01 AT4G32730 39.583 96 57 1 19 114 84 178 2.75e-18 79.7
MsG0280011065.01.T01 AT1G71030 61.818 55 21 0 59 113 5 59 2.97e-18 76.3
MsG0280011065.01.T01 AT4G32730 39.583 96 57 1 19 114 84 178 3.00e-18 79.3
MsG0280011065.01.T01 AT4G32730 39.583 96 57 1 19 114 84 178 3.00e-18 79.3
MsG0280011065.01.T01 AT4G32730 39.583 96 57 1 19 114 84 178 3.00e-18 79.3
MsG0280011065.01.T01 AT4G32730 39.583 96 57 1 19 114 84 178 3.00e-18 79.3
MsG0280011065.01.T01 AT1G71030 61.818 55 21 0 59 113 19 73 3.45e-18 76.3
MsG0280011065.01.T01 AT3G29020 43.011 93 52 1 22 114 67 158 3.96e-18 78.2
MsG0280011065.01.T01 AT2G02820 41.000 100 57 2 16 114 23 121 8.06e-18 77.4
MsG0280011065.01.T01 AT2G02820 41.000 100 57 2 16 114 23 121 1.53e-17 77.4
MsG0280011065.01.T01 AT2G02820 37.500 104 64 1 11 114 19 121 1.83e-17 77.0
MsG0280011065.01.T01 AT5G40430 36.634 101 62 2 15 115 47 145 6.11e-16 71.6
MsG0280011065.01.T01 AT2G37630 43.023 86 47 1 25 108 7 92 1.05e-15 72.0
MsG0280011065.01.T01 AT4G00540 38.776 98 56 2 20 114 101 197 2.04e-15 71.2
MsG0280011065.01.T01 AT4G00540 38.776 98 56 2 20 114 99 195 2.36e-15 71.2
MsG0280011065.01.T01 AT1G14350 39.000 100 59 2 16 114 18 116 2.87e-15 70.9
MsG0280011065.01.T01 AT1G14350 39.000 100 59 2 16 114 18 116 2.87e-15 70.9
MsG0280011065.01.T01 AT1G18960 38.542 96 52 4 22 115 10 100 4.08e-15 69.7
MsG0280011065.01.T01 AT5G39700 38.776 98 59 1 17 114 51 147 8.94e-15 67.4
MsG0280011065.01.T01 AT4G25560 72.973 37 10 0 79 115 3 39 4.27e-12 60.8

Find 27 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCATTTCCATTCTCTACT+TGG 0.331995 2:+79035177 MsG0280011065.01.T01:CDS
ATAAGTTTCTCATCTTCTTC+TGG 0.343578 2:-79034997 None:intergenic
TCCATTCTCTACTTGGAAAC+AGG 0.357544 2:+79035184 MsG0280011065.01.T01:CDS
TGAGAAACTTATGAACTATA+TGG 0.383745 2:+79035008 MsG0280011065.01.T01:CDS
AATAAGAAGAAGCTTAGAAA+AGG 0.395517 2:+79034964 MsG0280011065.01.T01:CDS
ATAAGAAGAAGCTTAGAAAA+GGG 0.437066 2:+79034965 MsG0280011065.01.T01:CDS
GCAAAAGTTGTAGGCTAAGA+TGG 0.440363 2:+79035091 MsG0280011065.01.T01:CDS
CAAATAGCAGCACGATTGCC+AGG 0.441194 2:+79036056 MsG0280011065.01.T01:CDS
TTCCAAGTAGAGAATGGAAA+TGG 0.466365 2:-79035179 None:intergenic
AGAAGCTTAGAAAAGGGTTA+TGG 0.469205 2:+79034971 MsG0280011065.01.T01:CDS
ACCTGTTTCCAAGTAGAGAA+TGG 0.482922 2:-79035185 None:intergenic
AAAGGTGTGGCAAAAGTTGT+AGG 0.487488 2:+79035082 MsG0280011065.01.T01:CDS
AGTGATGTGGCAAGAAATGC+TGG 0.495909 2:+79035054 MsG0280011065.01.T01:CDS
ATTTCATTGTCGGTTCTCCC+TGG 0.500673 2:-79036074 None:intergenic
TAAGGAATGGACAAGGATGT+TGG 0.517923 2:+79035031 MsG0280011065.01.T01:CDS
TTGAGGCCTGATCTTAAAAG+AGG 0.524373 2:+79035123 MsG0280011065.01.T01:CDS
AACTTATGAACTATATGGTA+AGG 0.549340 2:+79035013 MsG0280011065.01.T01:CDS
TGTGGCAAGAAATGCTGGAT+TGG 0.558000 2:+79035059 MsG0280011065.01.T01:CDS
TGCTTTCTCAACACAAGAAG+AGG 0.558583 2:+79035146 MsG0280011065.01.T01:CDS
ATGAACTATATGGTAAGGAA+TGG 0.576418 2:+79035018 MsG0280011065.01.T01:CDS
TAAGATGGATCAATTACTTG+AGG 0.619133 2:+79035106 MsG0280011065.01.T01:CDS
AAATAGCAGCACGATTGCCA+GGG 0.633923 2:+79036057 MsG0280011065.01.T01:CDS
TAATACAATGAGAAAGCCAG+AGG 0.648697 2:+79034912 None:intergenic
CAAGAAATGCTGGATTGGAA+AGG 0.662106 2:+79035064 MsG0280011065.01.T01:CDS
ACAAGGATGTTGGAGTGATG+TGG 0.680620 2:+79035041 MsG0280011065.01.T01:CDS
TATATGGTAAGGAATGGACA+AGG 0.707363 2:+79035024 MsG0280011065.01.T01:CDS
AATGCTGGATTGGAAAGGTG+TGG 0.738038 2:+79035069 MsG0280011065.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAATATTTGAACTTA+AGG - Chr2:79035596-79035615 None:intergenic 10.0%
!! TTCATTTATTCTATATAAAA+AGG - Chr2:79035744-79035763 None:intergenic 10.0%
!!! ATATTTTTAATAATGAAAAC+AGG + Chr2:79035605-79035624 MsG0280011065.01.T01:intron 10.0%
!! ATTGAATTTATTGTTTAAGA+TGG - Chr2:79035239-79035258 None:intergenic 15.0%
!! TAATAAAAAATCTTCAGATA+TGG - Chr2:79035916-79035935 None:intergenic 15.0%
!!! AAAGTTTTTTATTTCATTGT+CGG - Chr2:79036087-79036106 None:intergenic 15.0%
!!! GTGATTTTGTTAAATTATAT+TGG + Chr2:79035292-79035311 MsG0280011065.01.T01:intron 15.0%
!!! TTTTCAACATATATGAATTA+TGG - Chr2:79035342-79035361 None:intergenic 15.0%
!! GACAATGAAATAAAAAACTT+TGG + Chr2:79036086-79036105 MsG0280011065.01.T01:CDS 20.0%
!! TATATGAATTATGGTGAATT+TGG - Chr2:79035333-79035352 None:intergenic 20.0%
!! TGATTATTGTATGACTTAAA+TGG - Chr2:79035661-79035680 None:intergenic 20.0%
!!! ATACATTTGATTTTTGAAGA+TGG + Chr2:79036030-79036049 MsG0280011065.01.T01:intron 20.0%
! AACTTATGAACTATATGGTA+AGG + Chr2:79035013-79035032 MsG0280011065.01.T01:CDS 25.0%
! AATAAGAAGAAGCTTAGAAA+AGG + Chr2:79034964-79034983 MsG0280011065.01.T01:CDS 25.0%
! ATAAGAAGAAGCTTAGAAAA+GGG + Chr2:79034965-79034984 MsG0280011065.01.T01:CDS 25.0%
! ATCAAATGTATTCAAATGTC+AGG - Chr2:79036021-79036040 None:intergenic 25.0%
! TAACAAAAGAATACTTTGCA+TGG - Chr2:79035943-79035962 None:intergenic 25.0%
! TGAGAAACTTATGAACTATA+TGG + Chr2:79035008-79035027 MsG0280011065.01.T01:CDS 25.0%
!! ATGCATCATTGATTAACATT+AGG + Chr2:79035261-79035280 MsG0280011065.01.T01:intron 25.0%
!! TGCATCATTGATTAACATTA+GGG + Chr2:79035262-79035281 MsG0280011065.01.T01:intron 25.0%
!!! ATTTTTTCCTCAAACAAATG+AGG + Chr2:79035784-79035803 MsG0280011065.01.T01:intron 25.0%
ATAAGTTTCTCATCTTCTTC+TGG - Chr2:79035000-79035019 None:intergenic 30.0%
ATGAACTATATGGTAAGGAA+TGG + Chr2:79035018-79035037 MsG0280011065.01.T01:CDS 30.0%
GATAACATGCAAACATATTC+TGG - Chr2:79035510-79035529 None:intergenic 30.0%
TAAGATGGATCAATTACTTG+AGG + Chr2:79035106-79035125 MsG0280011065.01.T01:CDS 30.0%
TAGTTAACCTCATTTGTTTG+AGG - Chr2:79035794-79035813 None:intergenic 30.0%
! ATCATTGATTAACATTAGGG+TGG + Chr2:79035265-79035284 MsG0280011065.01.T01:intron 30.0%
! GTTTAAGATGGATGATTAAG+TGG - Chr2:79035227-79035246 None:intergenic 30.0%
!! TTTTTAGTACTACAAACCTC+TGG - Chr2:79034931-79034950 None:intergenic 30.0%
AGAAGCTTAGAAAAGGGTTA+TGG + Chr2:79034971-79034990 MsG0280011065.01.T01:CDS 35.0%
ATCCATTTCCATTCTCTACT+TGG + Chr2:79035177-79035196 MsG0280011065.01.T01:CDS 35.0%
TATATGGTAAGGAATGGACA+AGG + Chr2:79035024-79035043 MsG0280011065.01.T01:CDS 35.0%
TTCCAAGTAGAGAATGGAAA+TGG - Chr2:79035182-79035201 None:intergenic 35.0%
!!! AAAGCACCTCTTTTAAGATC+AGG - Chr2:79035132-79035151 None:intergenic 35.0%
ACCTGTTTCCAAGTAGAGAA+TGG - Chr2:79035188-79035207 None:intergenic 40.0%
GCAAAAGTTGTAGGCTAAGA+TGG + Chr2:79035091-79035110 MsG0280011065.01.T01:CDS 40.0%
TAAGGAATGGACAAGGATGT+TGG + Chr2:79035031-79035050 MsG0280011065.01.T01:CDS 40.0%
TCCATTCTCTACTTGGAAAC+AGG + Chr2:79035184-79035203 MsG0280011065.01.T01:CDS 40.0%
TGCTTTCTCAACACAAGAAG+AGG + Chr2:79035146-79035165 MsG0280011065.01.T01:CDS 40.0%
TTGAGGCCTGATCTTAAAAG+AGG + Chr2:79035123-79035142 MsG0280011065.01.T01:CDS 40.0%
! AAAGGTGTGGCAAAAGTTGT+AGG + Chr2:79035082-79035101 MsG0280011065.01.T01:CDS 40.0%
! CAAGAAATGCTGGATTGGAA+AGG + Chr2:79035064-79035083 MsG0280011065.01.T01:CDS 40.0%
AAATAGCAGCACGATTGCCA+GGG + Chr2:79036057-79036076 MsG0280011065.01.T01:CDS 45.0%
AATAGTGCGTGAGTGTCTCA+TGG - Chr2:79035636-79035655 None:intergenic 45.0%
ACAAGGATGTTGGAGTGATG+TGG + Chr2:79035041-79035060 MsG0280011065.01.T01:CDS 45.0%
AGTGATGTGGCAAGAAATGC+TGG + Chr2:79035054-79035073 MsG0280011065.01.T01:CDS 45.0%
TGTGGCAAGAAATGCTGGAT+TGG + Chr2:79035059-79035078 MsG0280011065.01.T01:CDS 45.0%
! AATGCTGGATTGGAAAGGTG+TGG + Chr2:79035069-79035088 MsG0280011065.01.T01:CDS 45.0%
!! ATTTCATTGTCGGTTCTCCC+TGG - Chr2:79036077-79036096 None:intergenic 45.0%
CAAATAGCAGCACGATTGCC+AGG + Chr2:79036056-79036075 MsG0280011065.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr2 gene 79034919 79036121 79034919 ID=MsG0280011065.01;Name=MsG0280011065.01
Chr2 mRNA 79034919 79036121 79034919 ID=MsG0280011065.01.T01;Parent=MsG0280011065.01;Name=MsG0280011065.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|119
Chr2 exon 79034919 79035205 79034919 ID=MsG0280011065.01.T01:exon:9910;Parent=MsG0280011065.01.T01
Chr2 exon 79036049 79036121 79036049 ID=MsG0280011065.01.T01:exon:9911;Parent=MsG0280011065.01.T01
Chr2 CDS 79034919 79035205 79034919 ID=MsG0280011065.01.T01:cds;Parent=MsG0280011065.01.T01
Chr2 CDS 79036049 79036121 79036049 ID=MsG0280011065.01.T01:cds;Parent=MsG0280011065.01.T01
Gene Sequence

>MsG0280011065.01.T01

ATGAGAAAGCCAGAGGTTTGTAGTACTAAAAACAACAACAATATTAATAAGAAGAAGCTTAGAAAAGGGTTATGGTCACCAGAAGAAGATGAGAAACTTATGAACTATATGGTAAGGAATGGACAAGGATGTTGGAGTGATGTGGCAAGAAATGCTGGATTGGAAAGGTGTGGCAAAAGTTGTAGGCTAAGATGGATCAATTACTTGAGGCCTGATCTTAAAAGAGGTGCTTTCTCAACACAAGAAGAGGAACTCATCATCCATTTCCATTCTCTACTTGGAAACAGATGGTCTCAAATAGCAGCACGATTGCCAGGGAGAACCGACAATGAAATAAAAAACTTTGGAATTCAACTATAA

Protein sequence

>MsG0280011065.01.T01

MRKPEVCSTKNNNNINKKKLRKGLWSPEEDEKLMNYMVRNGQGCWSDVARNAGLERCGKSCRLRWINYLRPDLKRGAFSTQEEELIIHFHSLLGNRWSQIAARLPGRTDNEIKNFGIQL*