AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014949.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014949.01.T01 MTR_3g466480 60.000 170 52 3 26 195 262 415 3.70e-56 184
MsG0380014949.01.T01 MTR_3g466440 61.475 122 10 1 1 85 1 122 1.51e-35 131
MsG0380014949.01.T01 MTR_3g466440 51.724 87 12 4 34 92 156 240 9.81e-12 63.5
MsG0380014949.01.T01 MTR_5g075100 43.275 171 78 4 26 195 265 417 3.80e-25 101
MsG0380014949.01.T01 MTR_7g072605 40.541 111 63 1 88 195 297 407 1.29e-15 74.3
MsG0380014949.01.T01 MTR_8g086380 38.261 115 66 2 85 195 350 463 5.79e-13 67.0
MsG0380014949.01.T01 MTR_2g016280 29.064 203 119 7 16 195 223 423 3.63e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014949.01.T01 AT5G01820 39.091 110 64 1 89 195 310 419 4.26e-18 81.6
MsG0380014949.01.T01 AT2G30360 38.889 126 71 2 75 194 293 418 6.64e-17 78.2
MsG0380014949.01.T01 AT4G18700 35.652 115 69 2 85 195 337 450 9.68e-14 69.3
MsG0380014949.01.T01 AT5G45810 32.759 116 72 2 85 195 341 455 1.28e-11 63.2

Find 47 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGGTTGAATGGTAATTT+TGG 0.156297 3:-62938568 MsG0380014949.01.T01:CDS
TATATCATTTACTTCCAATT+TGG 0.186596 3:-62938737 MsG0380014949.01.T01:CDS
GAGAGAGGTGATAGAGAAAA+TGG 0.190882 3:-62939491 MsG0380014949.01.T01:CDS
TTGGATTTGTCTGGATTGTT+TGG 0.276292 3:-62938718 MsG0380014949.01.T01:CDS
GGATTGTTTGGGGAATTTGA+TGG 0.292044 3:-62938706 MsG0380014949.01.T01:CDS
TGATAGAGAAAATGGGTATA+AGG 0.292592 3:-62939483 MsG0380014949.01.T01:CDS
GGAGTCGCCGGAGAGGATTT+TGG 0.326816 3:-62938662 MsG0380014949.01.T01:CDS
CAATCCAGACAAATCCAAAT+TGG 0.348070 3:+62938723 None:intergenic
TTGGAGGTGGTGGAGGAGGT+TGG 0.349271 3:-62938643 MsG0380014949.01.T01:CDS
GAAATTCTTACACCAACTTT+AGG 0.349556 3:+62939596 None:intergenic
GGAGGAGGTTGGAGCGGCGG+AGG 0.356634 3:-62938632 MsG0380014949.01.T01:CDS
GATAGAGAAAATGGGTATAA+GGG 0.364549 3:-62939482 MsG0380014949.01.T01:CDS
GATTGTTTGGGGAATTTGAT+GGG 0.365511 3:-62938705 MsG0380014949.01.T01:CDS
GAATTGAGATTGAGGTTTAT+CGG 0.368768 3:-62938546 MsG0380014949.01.T01:CDS
GTAACAGATGAAGGGTTTAG+AGG 0.369803 3:-62939554 MsG0380014949.01.T01:CDS
TGGATTTGTCTGGATTGTTT+GGG 0.374891 3:-62938717 MsG0380014949.01.T01:CDS
ACTTCCAATTTGGATTTGTC+TGG 0.387787 3:-62938727 MsG0380014949.01.T01:CDS
GGTGGAGGAGGTTGGAGCGG+CGG 0.405214 3:-62938635 MsG0380014949.01.T01:CDS
AACTTTGGAGGAATCGAATC+AGG 0.418956 3:-62939440 MsG0380014949.01.T01:CDS
CGGCGGAGGGAATGGCGTTA+AGG 0.429904 3:-62938618 MsG0380014949.01.T01:CDS
TCTAGAATTGTAACAGATGA+AGG 0.438012 3:-62939563 MsG0380014949.01.T01:CDS
GGTGGTGGAGGAGGTTGGAG+CGG 0.469507 3:-62938638 MsG0380014949.01.T01:CDS
GGTTGGAGCGGCGGAGGGAA+TGG 0.473370 3:-62938626 MsG0380014949.01.T01:CDS
AGAGAGGTGATAGAGAAAAT+GGG 0.489685 3:-62939490 MsG0380014949.01.T01:CDS
AGAGGAGGTGGCGATGGTTG+AGG 0.505484 3:-62938518 MsG0380014949.01.T01:CDS
GAAAGAATGTGGGGTAGAGT+TGG 0.508521 3:-62938590 MsG0380014949.01.T01:CDS
GAGGAGGTTGGAGCGGCGGA+GGG 0.535656 3:-62938631 MsG0380014949.01.T01:CDS
CGGAGGGAATGGCGTTAAGG+TGG 0.544084 3:-62938615 MsG0380014949.01.T01:CDS
GTAGAGTTGGAAAGGTTGAA+TGG 0.553562 3:-62938577 MsG0380014949.01.T01:CDS
TTATCGGTTAACAGAGGAGG+TGG 0.557119 3:-62938530 MsG0380014949.01.T01:CDS
AGAGGAAATGAAGAAAAGAG+TGG 0.559097 3:-62939536 MsG0380014949.01.T01:CDS
GTTAACAGAGGAGGTGGCGA+TGG 0.567129 3:-62938524 MsG0380014949.01.T01:CDS
GGATTTGTCTGGATTGTTTG+GGG 0.577981 3:-62938716 MsG0380014949.01.T01:CDS
AATGTGGGGTAGAGTTGGAA+AGG 0.583569 3:-62938585 MsG0380014949.01.T01:CDS
ACCACCTCCAAAATCCTCTC+CGG 0.584270 3:+62938655 None:intergenic
TAAGGTGGAAGAAAGAATGT+GGG 0.587111 3:-62938600 MsG0380014949.01.T01:CDS
ATAGAGAAAATGGGTATAAG+GGG 0.591187 3:-62939481 MsG0380014949.01.T01:CDS
CTAGAATTGTAACAGATGAA+GGG 0.596944 3:-62939562 MsG0380014949.01.T01:CDS
ATTGTTTGGGGAATTTGATG+GGG 0.597233 3:-62938704 MsG0380014949.01.T01:CDS
TTAAGGTGGAAGAAAGAATG+TGG 0.601430 3:-62938601 MsG0380014949.01.T01:CDS
GAATCGAATCAGGTGAAGAG+AGG 0.602159 3:-62939430 MsG0380014949.01.T01:CDS
GGTTTATCGGTTAACAGAGG+AGG 0.605432 3:-62938533 MsG0380014949.01.T01:CDS
TTGAAGCATAATGTCTACTG+AGG 0.630230 3:-62939648 None:intergenic
ATGGTTGAGGTACAGAGGAG+AGG 0.648476 3:-62938505 MsG0380014949.01.T01:CDS
TGAGGTTTATCGGTTAACAG+AGG 0.655322 3:-62938536 MsG0380014949.01.T01:CDS
TGGCGATGGTTGAGGTACAG+AGG 0.656722 3:-62938510 MsG0380014949.01.T01:CDS
AAGGTGGAAGAAAGAATGTG+GGG 0.692861 3:-62938599 MsG0380014949.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAAAAATTCATAAAAGAT+GGG - Chr3:62938907-62938926 MsG0380014949.01.T01:intron 15.0%
!!! AATTCACCTTTATAAATTTT+TGG + Chr3:62939112-62939131 None:intergenic 15.0%
!!! ATTCACCTTTATAAATTTTT+GGG + Chr3:62939111-62939130 None:intergenic 15.0%
!!! ATTTTCCCAAAAATTTATAA+AGG - Chr3:62939103-62939122 MsG0380014949.01.T01:intron 15.0%
!!! TTAAAGTTTAAATGTGTTTT+TGG - Chr3:62938738-62938757 MsG0380014949.01.T01:CDS 15.0%
!! AAAATTATTGGATACAAACT+CGG - Chr3:62939174-62939193 MsG0380014949.01.T01:intron 20.0%
!! GAAAAATTGACATATTTACA+GGG + Chr3:62938765-62938784 None:intergenic 20.0%
!! GTAGAAAAATTCATAAAAGA+TGG - Chr3:62938906-62938925 MsG0380014949.01.T01:intron 20.0%
!! TACATATGAGTTTACTTTAT+AGG + Chr3:62938860-62938879 None:intergenic 20.0%
!! TATATCATTTACTTCCAATT+TGG - Chr3:62939354-62939373 MsG0380014949.01.T01:intron 20.0%
! ATTAGAAAAAAGCCTAAAGT+TGG - Chr3:62938483-62938502 MsG0380014949.01.T01:CDS 25.0%
! CGAAAAATTGACATATTTAC+AGG + Chr3:62938766-62938785 None:intergenic 25.0%
! TATGAGTTTACTTTATAGGA+TGG + Chr3:62938856-62938875 None:intergenic 25.0%
! TTGAAGAAAAATGTGAACTT+TGG - Chr3:62938636-62938655 MsG0380014949.01.T01:CDS 25.0%
! TTTATAAGGAATATATCCAG+CGG + Chr3:62938715-62938734 None:intergenic 25.0%
!! GCGATTTTTGTCAAAATTAT+TGG - Chr3:62939162-62939181 MsG0380014949.01.T01:intron 25.0%
!!! AAGTTTTATGAGGAAGATTA+TGG - Chr3:62939262-62939281 MsG0380014949.01.T01:intron 25.0%
!!! ATAATTTTGACAAAAATCGC+TGG + Chr3:62939162-62939181 None:intergenic 25.0%
!!! TAATTTTGGAATTGAGATTG+AGG - Chr3:62939537-62939556 MsG0380014949.01.T01:CDS 25.0%
AAGAAAAATGTGAACTTTGG+AGG - Chr3:62938639-62938658 MsG0380014949.01.T01:CDS 30.0%
AATTCATAAAAGATGGGTCT+CGG - Chr3:62938913-62938932 MsG0380014949.01.T01:intron 30.0%
ATAGAGAAAATGGGTATAAG+GGG - Chr3:62938610-62938629 MsG0380014949.01.T01:CDS 30.0%
CTAGAATTGTAACAGATGAA+GGG - Chr3:62938529-62938548 MsG0380014949.01.T01:CDS 30.0%
GAAATTCTTACACCAACTTT+AGG + Chr3:62938498-62938517 None:intergenic 30.0%
GAATTGAGATTGAGGTTTAT+CGG - Chr3:62939545-62939564 MsG0380014949.01.T01:CDS 30.0%
GATAGAGAAAATGGGTATAA+GGG - Chr3:62938609-62938628 MsG0380014949.01.T01:CDS 30.0%
TGAAGATGGGAAAATTTAGA+GGG + Chr3:62938825-62938844 None:intergenic 30.0%
TGATAGAGAAAATGGGTATA+AGG - Chr3:62938608-62938627 MsG0380014949.01.T01:CDS 30.0%
! AATTTTCCCATCTTCACTTT+TGG - Chr3:62938829-62938848 MsG0380014949.01.T01:intron 30.0%
! AGTGTTTTCCTAAAACTAGA+GGG - Chr3:62939037-62939056 MsG0380014949.01.T01:intron 30.0%
! GAAAGGTTGAATGGTAATTT+TGG - Chr3:62939523-62939542 MsG0380014949.01.T01:CDS 30.0%
! TCTAGAATTGTAACAGATGA+AGG - Chr3:62938528-62938547 MsG0380014949.01.T01:CDS 30.0%
!! AGAAGAAAGTTTTATGAGAG+AGG - Chr3:62938585-62938604 MsG0380014949.01.T01:CDS 30.0%
!! CAAGGAGATAAAGTTTTATG+AGG - Chr3:62939252-62939271 MsG0380014949.01.T01:intron 30.0%
ACTTCCAATTTGGATTTGTC+TGG - Chr3:62939364-62939383 MsG0380014949.01.T01:intron 35.0%
ACTTGTGTTCTTCTCACTAA+CGG - Chr3:62938987-62939006 MsG0380014949.01.T01:intron 35.0%
AGAGAGGTGATAGAGAAAAT+GGG - Chr3:62938601-62938620 MsG0380014949.01.T01:CDS 35.0%
AGAGGAAATGAAGAAAAGAG+TGG - Chr3:62938555-62938574 MsG0380014949.01.T01:CDS 35.0%
ATTGTTTGGGGAATTTGATG+GGG - Chr3:62939387-62939406 MsG0380014949.01.T01:intron 35.0%
CAATCCAGACAAATCCAAAT+TGG + Chr3:62939371-62939390 None:intergenic 35.0%
GATTGTTTGGGGAATTTGAT+GGG - Chr3:62939386-62939405 MsG0380014949.01.T01:intron 35.0%
GTGAAGATGGGAAAATTTAG+AGG + Chr3:62938826-62938845 None:intergenic 35.0%
TAAGGTGGAAGAAAGAATGT+GGG - Chr3:62939491-62939510 MsG0380014949.01.T01:CDS 35.0%
TGGATTTGTCTGGATTGTTT+GGG - Chr3:62939374-62939393 MsG0380014949.01.T01:intron 35.0%
TTAAGGTGGAAGAAAGAATG+TGG - Chr3:62939490-62939509 MsG0380014949.01.T01:CDS 35.0%
TTGGATTTGTCTGGATTGTT+TGG - Chr3:62939373-62939392 MsG0380014949.01.T01:intron 35.0%
! GAGTGTTTTCCTAAAACTAG+AGG - Chr3:62939036-62939055 MsG0380014949.01.T01:intron 35.0%
! GTGTTTTCCTAAAACTAGAG+GGG - Chr3:62939038-62939057 MsG0380014949.01.T01:intron 35.0%
! TGTCTACTGAGGAAGTTTTA+AGG - Chr3:62938454-62938473 MsG0380014949.01.T01:CDS 35.0%
! TTGTACCCTTTTCTAAACCA+CGG + Chr3:62939235-62939254 None:intergenic 35.0%
!! AGCGACTTTTAGTGATTTGT+GGG - Chr3:62939618-62939637 MsG0380014949.01.T01:CDS 35.0%
!!! CTGAGGAAGTTTTAAGGAAT+AGG - Chr3:62938460-62938479 MsG0380014949.01.T01:CDS 35.0%
!!! GGCAGAGCATTTTGTTTTAT+GGG - Chr3:62939408-62939427 MsG0380014949.01.T01:CDS 35.0%
AAGGTGGAAGAAAGAATGTG+GGG - Chr3:62939492-62939511 MsG0380014949.01.T01:CDS 40.0%
ATGGATACGAGTACGAGTTT+GGG - Chr3:62939281-62939300 MsG0380014949.01.T01:intron 40.0%
GAGAGAGGTGATAGAGAAAA+TGG - Chr3:62938600-62938619 MsG0380014949.01.T01:CDS 40.0%
GATGGACCAAAAGTGAAGAT+GGG + Chr3:62938838-62938857 None:intergenic 40.0%
GGATTGTTTGGGGAATTTGA+TGG - Chr3:62939385-62939404 MsG0380014949.01.T01:intron 40.0%
GGATTTGTCTGGATTGTTTG+GGG - Chr3:62939375-62939394 MsG0380014949.01.T01:intron 40.0%
GGTGCTAAGTGTTAACTCAA+GGG - Chr3:62939008-62939027 MsG0380014949.01.T01:intron 40.0%
GTAACAGATGAAGGGTTTAG+AGG - Chr3:62938537-62938556 MsG0380014949.01.T01:CDS 40.0%
GTAGAGTTGGAAAGGTTGAA+TGG - Chr3:62939514-62939533 MsG0380014949.01.T01:CDS 40.0%
GTGCTAAGTGTTAACTCAAG+GGG - Chr3:62939009-62939028 MsG0380014949.01.T01:intron 40.0%
TATGGATACGAGTACGAGTT+TGG - Chr3:62939280-62939299 MsG0380014949.01.T01:intron 40.0%
TCACGGTTGACGGTATTAAT+CGG - Chr3:62939206-62939225 MsG0380014949.01.T01:intron 40.0%
! AACTTTGGAGGAATCGAATC+AGG - Chr3:62938651-62938670 MsG0380014949.01.T01:CDS 40.0%
! CAGCGACTTTTAGTGATTTG+TGG - Chr3:62939617-62939636 MsG0380014949.01.T01:CDS 40.0%
! GTGGTTTAGAAAAGGGTACA+AGG - Chr3:62939234-62939253 MsG0380014949.01.T01:intron 40.0%
! TGAGGTTTATCGGTTAACAG+AGG - Chr3:62939555-62939574 MsG0380014949.01.T01:CDS 40.0%
! TTTTATGAGAGAGTAACCGC+TGG - Chr3:62938696-62938715 MsG0380014949.01.T01:CDS 40.0%
!!! CAAACATCCCCTCTAGTTTT+AGG + Chr3:62939048-62939067 None:intergenic 40.0%
!!! GGGCAGAGCATTTTGTTTTA+TGG - Chr3:62939407-62939426 MsG0380014949.01.T01:CDS 40.0%
!!! TTTTGTTTTATGGGAGTCGC+CGG - Chr3:62939417-62939436 MsG0380014949.01.T01:CDS 40.0%
AAACTCGGAAACCCAGATCA+CGG - Chr3:62939189-62939208 MsG0380014949.01.T01:intron 45.0%
AAATTACGATGACCTCCCTC+AGG + Chr3:62939087-62939106 None:intergenic 45.0%
AAGTGTCCACGTTGGATGAT+AGG - Chr3:62939133-62939152 MsG0380014949.01.T01:intron 45.0%
AATACCGTCAACCGTGATCT+GGG + Chr3:62939203-62939222 None:intergenic 45.0%
AATGTGGGGTAGAGTTGGAA+AGG - Chr3:62939506-62939525 MsG0380014949.01.T01:CDS 45.0%
AATTACGATGACCTCCCTCA+GGG + Chr3:62939086-62939105 None:intergenic 45.0%
CACGGTTGACGGTATTAATC+GGG - Chr3:62939207-62939226 MsG0380014949.01.T01:intron 45.0%
CTAAGTGTTAACTCAAGGGG+AGG - Chr3:62939012-62939031 MsG0380014949.01.T01:intron 45.0%
GAAAGAATGTGGGGTAGAGT+TGG - Chr3:62939501-62939520 MsG0380014949.01.T01:CDS 45.0%
GAATCGAATCAGGTGAAGAG+AGG - Chr3:62938661-62938680 MsG0380014949.01.T01:CDS 45.0%
GGATGGACCAAAAGTGAAGA+TGG + Chr3:62938839-62938858 None:intergenic 45.0%
GGGATCCGTGGTTTAGAAAA+GGG - Chr3:62939227-62939246 MsG0380014949.01.T01:intron 45.0%
GGTTCAGGTGTAAACGTGAT+GGG - Chr3:62939302-62939321 MsG0380014949.01.T01:intron 45.0%
GTGAATTCAAGTGTCCACGT+TGG - Chr3:62939125-62939144 MsG0380014949.01.T01:intron 45.0%
TAATACCGTCAACCGTGATC+TGG + Chr3:62939204-62939223 None:intergenic 45.0%
! CGGTGCTAAGTGTTAACTCA+AGG - Chr3:62939007-62939026 MsG0380014949.01.T01:intron 45.0%
! GAGGGGATGTTTGTGTTGTT+TGG - Chr3:62939055-62939074 MsG0380014949.01.T01:intron 45.0%
! GGTTTATCGGTTAACAGAGG+AGG - Chr3:62939558-62939577 MsG0380014949.01.T01:CDS 45.0%
! GTTGTTTGGTGAAACCCTGA+GGG - Chr3:62939069-62939088 MsG0380014949.01.T01:intron 45.0%
! TGTTGTTTGGTGAAACCCTG+AGG - Chr3:62939068-62939087 MsG0380014949.01.T01:intron 45.0%
! TTATCGGTTAACAGAGGAGG+TGG - Chr3:62939561-62939580 MsG0380014949.01.T01:CDS 45.0%
!!! TTAAACTTTAATTTTTTATA+AGG + Chr3:62938729-62938748 None:intergenic 5.0%
AAAGATGGGTCTCGGACTCT+CGG - Chr3:62938921-62938940 MsG0380014949.01.T01:intron 50.0%
ACCACCTCCAAAATCCTCTC+CGG + Chr3:62939439-62939458 None:intergenic 50.0%
ACGGTATTAATCGGGATCCG+TGG - Chr3:62939215-62939234 MsG0380014949.01.T01:intron 50.0%
ATGGTTGAGGTACAGAGGAG+AGG - Chr3:62939586-62939605 MsG0380014949.01.T01:CDS 50.0%
CGGGATCCGTGGTTTAGAAA+AGG - Chr3:62939226-62939245 MsG0380014949.01.T01:intron 50.0%
GAAACCCAGATCACGGTTGA+CGG - Chr3:62939196-62939215 MsG0380014949.01.T01:intron 50.0%
GGGTTCAGGTGTAAACGTGA+TGG - Chr3:62939301-62939320 MsG0380014949.01.T01:intron 50.0%
TGGAGACCTATCATCCAACG+TGG + Chr3:62939142-62939161 None:intergenic 50.0%
! ACGAGTACGAGTTTGGGTTC+AGG - Chr3:62939287-62939306 MsG0380014949.01.T01:intron 50.0%
!! CAGGTGTAAACGTGATGGGT+AGG - Chr3:62939306-62939325 MsG0380014949.01.T01:intron 50.0%
GTTAACAGAGGAGGTGGCGA+TGG - Chr3:62939567-62939586 MsG0380014949.01.T01:CDS 55.0%
TGGCGATGGTTGAGGTACAG+AGG - Chr3:62939581-62939600 MsG0380014949.01.T01:CDS 55.0%
! GTTTGGTGAAACCCTGAGGG+AGG - Chr3:62939072-62939091 MsG0380014949.01.T01:intron 55.0%
! TTTTATGGGAGTCGCCGGAG+AGG - Chr3:62939422-62939441 MsG0380014949.01.T01:CDS 55.0%
!! GAGGATTTTGGAGGTGGTGG+AGG - Chr3:62939441-62939460 MsG0380014949.01.T01:CDS 55.0%
!! GGAGAGGATTTTGGAGGTGG+TGG - Chr3:62939438-62939457 MsG0380014949.01.T01:CDS 55.0%
!!! GATTTTGGAGGTGGTGGAGG+AGG - Chr3:62939444-62939463 MsG0380014949.01.T01:CDS 55.0%
AGAGGAGGTGGCGATGGTTG+AGG - Chr3:62939573-62939592 MsG0380014949.01.T01:CDS 60.0%
CGGAGGGAATGGCGTTAAGG+TGG - Chr3:62939476-62939495 MsG0380014949.01.T01:CDS 60.0%
! GGAGTCGCCGGAGAGGATTT+TGG - Chr3:62939429-62939448 MsG0380014949.01.T01:CDS 60.0%
! GTCGCCGGAGAGGATTTTGG+AGG - Chr3:62939432-62939451 MsG0380014949.01.T01:CDS 60.0%
!! GCCGGAGAGGATTTTGGAGG+TGG - Chr3:62939435-62939454 MsG0380014949.01.T01:CDS 60.0%
!! TTGGAGGTGGTGGAGGAGGT+TGG - Chr3:62939448-62939467 MsG0380014949.01.T01:CDS 60.0%
CGGCGGAGGGAATGGCGTTA+AGG - Chr3:62939473-62939492 MsG0380014949.01.T01:CDS 65.0%
!! GGTGGTGGAGGAGGTTGGAG+CGG - Chr3:62939453-62939472 MsG0380014949.01.T01:CDS 65.0%
GAGGAGGTTGGAGCGGCGGA+GGG - Chr3:62939460-62939479 MsG0380014949.01.T01:CDS 70.0%
GGTGGAGGAGGTTGGAGCGG+CGG - Chr3:62939456-62939475 MsG0380014949.01.T01:CDS 70.0%
GGTTGGAGCGGCGGAGGGAA+TGG - Chr3:62939465-62939484 MsG0380014949.01.T01:CDS 70.0%
GGAGGAGGTTGGAGCGGCGG+AGG - Chr3:62939459-62939478 MsG0380014949.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 62938453 62939660 62938453 ID=MsG0380014949.01;Name=MsG0380014949.01
Chr3 mRNA 62938453 62939660 62938453 ID=MsG0380014949.01.T01;Parent=MsG0380014949.01;Name=MsG0380014949.01.T01;_AED=0.49;_eAED=0.71;_QI=0|0|0|1|1|1|2|0|195
Chr3 exon 62939406 62939660 62939406 ID=MsG0380014949.01.T01:exon:8539;Parent=MsG0380014949.01.T01
Chr3 exon 62938453 62938785 62938453 ID=MsG0380014949.01.T01:exon:8538;Parent=MsG0380014949.01.T01
Chr3 CDS 62939406 62939660 62939406 ID=MsG0380014949.01.T01:cds;Parent=MsG0380014949.01.T01
Chr3 CDS 62938453 62938785 62938453 ID=MsG0380014949.01.T01:cds;Parent=MsG0380014949.01.T01
Gene Sequence

>MsG0380014949.01.T01

ATGTCTACTGAGGAAGTTTTAAGGAATAGGATTAGAAAAAAGCCTAAAGTTGGTGTAAGAATTTCTAAGAACTCGTCTAGAATTGTAACAGATGAAGGGTTTAGAGGAAATGAAGAAAAGAGTGGTTATGAGAGAAGAAAGTTTTATGAGAGAGGTGATAGAGAAAATGGGTATAAGGGGAAGTTGAAGAAAAATGTGAACTTTGGAGGAATCGAATCAGGTGAAGAGAGGAGTTGTGAGCATTTTTATGAGAGAGTATTGAATTTGAAAGCATTTGTTATTATATCATTTACTTCCAATTTGGATTTGTCTGGATTGTTTGGGGAATTTGATGGGGCAGAGCATTTTGTTTTATGGGAGTCGCCGGAGAGGATTTTGGAGGTGGTGGAGGAGGTTGGAGCGGCGGAGGGAATGGCGTTAAGGTGGAAGAAAGAATGTGGGGTAGAGTTGGAAAGGTTGAATGGTAATTTTGGAATTGAGATTGAGGTTTATCGGTTAACAGAGGAGGTGGCGATGGTTGAGGTACAGAGGAGAGGAAATGATGCAGCGACTTTTAGTGATTTGTGGGATAATAAGCTTAAGCCTTAG

Protein sequence

>MsG0380014949.01.T01

MSTEEVLRNRIRKKPKVGVRISKNSSRIVTDEGFRGNEEKSGYERRKFYERGDRENGYKGKLKKNVNFGGIESGEERSCEHFYERVLNLKAFVIISFTSNLDLSGLFGEFDGAEHFVLWESPERILEVVEEVGAAEGMALRWKKECGVELERLNGNFGIEIEVYRLTEEVAMVEVQRRGNDAATFSDLWDNKLKP*