Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014949.01.T01 | PNX73592.1 | 60.92 | 174 | 52 | 3 | 22 | 195 | 254 | 411 | 1.05E-52 | 184 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014949.01.T01 | Q9LZW4 | 39.091 | 110 | 64 | 1 | 89 | 195 | 310 | 419 | 4.18E-17 | 81.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014949.01.T01 | A0A072UYE6 | 60.000 | 170 | 52 | 3 | 26 | 195 | 262 | 415 | 1.46e-52 | 184 |
MsG0380014949.01.T01 | A0A2K3L4X3 | 60.920 | 174 | 52 | 3 | 22 | 195 | 254 | 411 | 5.03e-53 | 184 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047797.01 | MsG0380014949.01 | 0.801982 | 6.962292e-49 | 3.370957e-46 |
MsG0080048058.01 | MsG0380014949.01 | 0.804950 | 1.689052e-49 | 8.825094e-47 |
MsG0080048461.01 | MsG0380014949.01 | 0.815567 | 8.651054e-52 | 5.985754e-49 |
MsG0080048464.01 | MsG0380014949.01 | 0.812760 | 3.604954e-51 | 2.311558e-48 |
MsG0080048769.01 | MsG0380014949.01 | 0.804525 | 2.072227e-49 | 1.070780e-46 |
MsG0080048787.01 | MsG0380014949.01 | 0.822004 | 2.986657e-53 | 2.469006e-50 |
MsG0080048856.01 | MsG0380014949.01 | 0.821358 | 4.212154e-53 | 3.419150e-50 |
MsG0080048874.01 | MsG0380014949.01 | 0.805486 | 1.304008e-49 | 6.907540e-47 |
MsG0080048928.01 | MsG0380014949.01 | 0.801889 | 7.275358e-49 | 3.514568e-46 |
MsG0180000065.01 | MsG0380014949.01 | 0.814626 | 1.400048e-51 | 9.442025e-49 |
MsG0180000091.01 | MsG0380014949.01 | 0.853221 | 2.757850e-61 | 5.916109e-58 |
MsG0180000295.01 | MsG0380014949.01 | 0.832424 | 9.527581e-56 | 1.064458e-52 |
MsG0180000334.01 | MsG0380014949.01 | 0.818392 | 2.007838e-52 | 1.501107e-49 |
MsG0180000335.01 | MsG0380014949.01 | 0.805726 | 1.161592e-49 | 6.191466e-47 |
MsG0180000470.01 | MsG0380014949.01 | 0.835938 | 1.253416e-56 | 1.555877e-53 |
MsG0180000555.01 | MsG0380014949.01 | 0.821365 | 4.197671e-53 | 3.408004e-50 |
MsG0180000702.01 | MsG0380014949.01 | 0.848133 | 7.439837e-60 | 1.351787e-56 |
MsG0180000703.01 | MsG0380014949.01 | 0.834797 | 2.435167e-56 | 2.920746e-53 |
MsG0180000741.01 | MsG0380014949.01 | 0.812979 | 3.227498e-51 | 2.081541e-48 |
MsG0180000821.01 | MsG0380014949.01 | 0.800170 | 1.634211e-48 | 7.557565e-46 |
MsG0180000836.01 | MsG0380014949.01 | 0.828335 | 9.519136e-55 | 9.432989e-52 |
MsG0180001173.01 | MsG0380014949.01 | 0.825776 | 3.898812e-54 | 3.588238e-51 |
MsG0180001315.01 | MsG0380014949.01 | 0.800719 | 1.262811e-48 | 5.921922e-46 |
MsG0180001566.01 | MsG0380014949.01 | 0.817133 | 3.861108e-52 | 2.788523e-49 |
MsG0180001662.01 | MsG0380014949.01 | 0.815054 | 1.125340e-51 | 7.677199e-49 |
MsG0180002071.01 | MsG0380014949.01 | 0.819472 | 1.140597e-52 | 8.786050e-50 |
MsG0180002282.01 | MsG0380014949.01 | 0.801633 | 8.211207e-49 | 3.940707e-46 |
MsG0180002377.01 | MsG0380014949.01 | 0.815818 | 7.609075e-52 | 5.300877e-49 |
MsG0180002664.01 | MsG0380014949.01 | 0.819594 | 1.070228e-52 | 8.271593e-50 |
MsG0180002952.01 | MsG0380014949.01 | 0.833325 | 5.689690e-56 | 6.530940e-53 |
MsG0180002992.01 | MsG0380014949.01 | 0.812287 | 4.573219e-51 | 2.896080e-48 |
MsG0180003031.01 | MsG0380014949.01 | 0.811124 | 8.189862e-51 | 5.027726e-48 |
MsG0180003455.01 | MsG0380014949.01 | 0.829810 | 4.178633e-55 | 4.324248e-52 |
MsG0180003673.01 | MsG0380014949.01 | 0.800297 | 1.539540e-48 | 7.143216e-46 |
MsG0180003797.01 | MsG0380014949.01 | 0.812202 | 4.774003e-51 | 3.016192e-48 |
MsG0180003807.01 | MsG0380014949.01 | 0.837232 | 5.868027e-57 | 7.573794e-54 |
MsG0180003810.01 | MsG0380014949.01 | 0.818707 | 1.703297e-52 | 1.284425e-49 |
MsG0180003885.01 | MsG0380014949.01 | 0.802498 | 5.452753e-49 | 2.675046e-46 |
MsG0180004272.01 | MsG0380014949.01 | 0.806277 | 8.894225e-50 | 4.807880e-47 |
MsG0180004295.01 | MsG0380014949.01 | 0.811178 | 7.971308e-51 | 4.900562e-48 |
MsG0180004331.01 | MsG0380014949.01 | 0.829886 | 4.005138e-55 | 4.153400e-52 |
MsG0180004389.01 | MsG0380014949.01 | 0.811253 | 7.678311e-51 | 4.729814e-48 |
MsG0180004390.01 | MsG0380014949.01 | 0.804992 | 1.654823e-49 | 8.655258e-47 |
MsG0180004465.01 | MsG0380014949.01 | 0.826483 | 2.647268e-54 | 2.485688e-51 |
MsG0180004486.01 | MsG0380014949.01 | 0.807888 | 4.055916e-50 | 2.285633e-47 |
MsG0180004500.01 | MsG0380014949.01 | 0.805800 | 1.120753e-49 | 5.984843e-47 |
MsG0180004765.01 | MsG0380014949.01 | 0.822935 | 1.815000e-53 | 1.540795e-50 |
MsG0180004802.01 | MsG0380014949.01 | 0.825078 | 5.702421e-54 | 5.145011e-51 |
MsG0180004943.01 | MsG0380014949.01 | 0.827304 | 1.684751e-54 | 1.620197e-51 |
MsG0180005153.01 | MsG0380014949.01 | 0.800346 | 1.504533e-48 | 6.989436e-46 |
MsG0180005185.01 | MsG0380014949.01 | 0.837269 | 5.740777e-57 | 7.417891e-54 |
MsG0180005205.01 | MsG0380014949.01 | 0.810865 | 9.319890e-51 | 5.682529e-48 |
MsG0180005443.01 | MsG0380014949.01 | 0.808502 | 3.001254e-50 | 1.718950e-47 |
MsG0180005445.01 | MsG0380014949.01 | 0.869307 | 3.415274e-66 | 1.275615e-62 |
MsG0180005451.01 | MsG0380014949.01 | 0.806471 | 8.093730e-50 | 4.396853e-47 |
MsG0180005507.01 | MsG0380014949.01 | 0.812255 | 4.647830e-51 | 2.940757e-48 |
MsG0180005730.01 | MsG0380014949.01 | 0.813190 | 2.901093e-51 | 1.881699e-48 |
MsG0180006134.01 | MsG0380014949.01 | 0.816417 | 5.589162e-52 | 3.957998e-49 |
MsG0180006224.01 | MsG0380014949.01 | 0.809781 | 1.597259e-50 | 9.464081e-48 |
MsG0280006299.01 | MsG0380014949.01 | 0.806130 | 9.551853e-50 | 5.143956e-47 |
MsG0280010598.01 | MsG0380014949.01 | 0.817717 | 2.852807e-52 | 2.093525e-49 |
MsG0280010599.01 | MsG0380014949.01 | 0.841082 | 5.893693e-58 | 8.563380e-55 |
MsG0280010698.01 | MsG0380014949.01 | 0.824439 | 8.068729e-54 | 7.146851e-51 |
MsG0280010722.01 | MsG0380014949.01 | 0.830085 | 3.581090e-55 | 3.734470e-52 |
MsG0280010778.01 | MsG0380014949.01 | 0.805750 | 1.148164e-49 | 6.123710e-47 |
MsG0280010813.01 | MsG0380014949.01 | 0.820574 | 6.382162e-53 | 5.068845e-50 |
MsG0280010816.01 | MsG0380014949.01 | 0.808778 | 2.619578e-50 | 1.511120e-47 |
MsG0280011065.01 | MsG0380014949.01 | 0.813681 | 2.263606e-51 | 1.487999e-48 |
MsG0280011201.01 | MsG0380014949.01 | 0.803985 | 2.684169e-49 | 1.368020e-46 |
MsG0280011217.01 | MsG0380014949.01 | 0.802612 | 5.166395e-49 | 2.541968e-46 |
MsG0280011293.01 | MsG0380014949.01 | 0.811125 | 8.184431e-51 | 5.024541e-48 |
MsG0280011305.01 | MsG0380014949.01 | 0.814092 | 1.837492e-51 | 1.221379e-48 |
MsG0280011334.01 | MsG0380014949.01 | 0.824822 | 6.555252e-54 | 5.871347e-51 |
MsG0280011444.01 | MsG0380014949.01 | 0.814914 | 1.208307e-51 | 8.212089e-49 |
MsG0380011648.01 | MsG0380014949.01 | 0.800148 | 1.651006e-48 | 7.631034e-46 |
MsG0380011828.01 | MsG0380014949.01 | 0.806148 | 9.470431e-50 | 5.102368e-47 |
MsG0380012020.01 | MsG0380014949.01 | 0.808026 | 3.790906e-50 | 2.144157e-47 |
MsG0380012034.01 | MsG0380014949.01 | 0.829024 | 6.487216e-55 | 6.558573e-52 |
MsG0380012067.01 | MsG0380014949.01 | 0.833146 | 6.306980e-56 | 7.200461e-53 |
MsG0380012085.01 | MsG0380014949.01 | 0.802919 | 4.463515e-49 | 2.213438e-46 |
MsG0380012091.01 | MsG0380014949.01 | 0.800439 | 1.440242e-48 | 6.706460e-46 |
MsG0380012365.01 | MsG0380014949.01 | 0.816178 | 6.321471e-52 | 4.447617e-49 |
MsG0380012371.01 | MsG0380014949.01 | 0.814956 | 1.183037e-51 | 8.049552e-49 |
MsG0380012460.01 | MsG0380014949.01 | 0.821608 | 3.688471e-53 | 3.014990e-50 |
MsG0380013176.01 | MsG0380014949.01 | 0.855570 | 5.774734e-62 | 1.339026e-58 |
MsG0380013183.01 | MsG0380014949.01 | 0.826048 | 3.359044e-54 | 3.115448e-51 |
MsG0380013363.01 | MsG0380014949.01 | 0.839603 | 1.435817e-57 | 1.992798e-54 |
MsG0380013475.01 | MsG0380014949.01 | 0.820273 | 7.483393e-53 | 5.894285e-50 |
MsG0380013549.01 | MsG0380014949.01 | 0.803696 | 3.082351e-49 | 1.559251e-46 |
MsG0380013686.01 | MsG0380014949.01 | 0.806470 | 8.098489e-50 | 4.399304e-47 |
MsG0380014097.01 | MsG0380014949.01 | 0.829906 | 3.959669e-55 | 4.108667e-52 |
MsG0380014495.01 | MsG0380014949.01 | 0.808421 | 3.123729e-50 | 1.785287e-47 |
MsG0380014537.01 | MsG0380014949.01 | 0.843394 | 1.439472e-58 | 2.249354e-55 |
MsG0380014576.01 | MsG0380014949.01 | 0.802495 | 5.459636e-49 | 2.678233e-46 |
MsG0380014701.01 | MsG0380014949.01 | 0.839861 | 1.229982e-57 | 1.720798e-54 |
MsG0380014948.01 | MsG0380014949.01 | 0.850213 | 1.963270e-60 | 3.817618e-57 |
MsG0380014949.01 | MsG0380015039.01 | 0.839827 | 1.255092e-57 | 1.754155e-54 |
MsG0380014949.01 | MsG0380015196.01 | 0.808857 | 2.519878e-50 | 1.456684e-47 |
MsG0380014949.01 | MsG0380015332.01 | 0.841061 | 5.970562e-58 | 8.669567e-55 |
MsG0380014949.01 | MsG0380015436.01 | 0.808008 | 3.824334e-50 | 2.162045e-47 |
MsG0380014949.01 | MsG0380015440.01 | 0.809422 | 1.907477e-50 | 1.119494e-47 |
MsG0380014949.01 | MsG0380015555.01 | 0.818759 | 1.657770e-52 | 1.251979e-49 |
MsG0380014949.01 | MsG0380015944.01 | 0.802099 | 6.587762e-49 | 3.199255e-46 |
MsG0380014949.01 | MsG0380016200.01 | 0.801232 | 9.921973e-49 | 4.713892e-46 |
MsG0380014949.01 | MsG0380016236.01 | 0.825635 | 4.210581e-54 | 3.859475e-51 |
MsG0380014949.01 | MsG0380016387.01 | 0.825120 | 5.572897e-54 | 5.034067e-51 |
MsG0380014949.01 | MsG0380016407.01 | 0.836208 | 1.070859e-56 | 1.340460e-53 |
MsG0380014949.01 | MsG0380016505.01 | 0.804575 | 2.022574e-49 | 1.046529e-46 |
MsG0380014949.01 | MsG0380016517.01 | 0.816638 | 4.988533e-52 | 3.554110e-49 |
MsG0380014949.01 | MsG0380016694.01 | 0.802026 | 6.820644e-49 | 3.306145e-46 |
MsG0380014949.01 | MsG0380016923.01 | 0.811180 | 7.962659e-51 | 4.895558e-48 |
MsG0380014949.01 | MsG0380016970.01 | 0.801472 | 8.860635e-49 | 4.235197e-46 |
MsG0380014949.01 | MsG0380017233.01 | 0.811432 | 7.022652e-51 | 4.346455e-48 |
MsG0380014949.01 | MsG0380017244.01 | 0.807258 | 5.518329e-50 | 3.059319e-47 |
MsG0380014949.01 | MsG0380017335.01 | 0.803742 | 3.015120e-49 | 1.527059e-46 |
MsG0380014949.01 | MsG0380017452.01 | 0.821200 | 4.581577e-53 | 3.703053e-50 |
MsG0380014949.01 | MsG0480018183.01 | 0.820410 | 6.959824e-53 | 5.503052e-50 |
MsG0380014949.01 | MsG0480018251.01 | 0.831794 | 1.363704e-55 | 1.495779e-52 |
MsG0380014949.01 | MsG0480018313.01 | 0.804613 | 1.986055e-49 | 1.028640e-46 |
MsG0380014949.01 | MsG0480018465.01 | 0.843256 | 1.566659e-58 | 2.437181e-55 |
MsG0380014949.01 | MsG0480018640.01 | 0.801723 | 7.869723e-49 | 3.785323e-46 |
MsG0380014949.01 | MsG0480018778.01 | 0.804685 | 1.918173e-49 | 9.953535e-47 |
MsG0380014949.01 | MsG0480019035.01 | 0.801880 | 7.308360e-49 | 3.529613e-46 |
MsG0380014949.01 | MsG0480019297.01 | 0.803127 | 4.043025e-49 | 2.015499e-46 |
MsG0380014949.01 | MsG0480019435.01 | 0.812002 | 5.277766e-51 | 3.316333e-48 |
MsG0380014949.01 | MsG0480019453.01 | 0.820896 | 5.383442e-53 | 4.314310e-50 |
MsG0380014949.01 | MsG0480019970.01 | 0.836039 | 1.181928e-56 | 1.471650e-53 |
MsG0380014949.01 | MsG0480020331.01 | 0.808438 | 3.096645e-50 | 1.770680e-47 |
MsG0380014949.01 | MsG0480020634.01 | 0.801951 | 7.064394e-49 | 3.417781e-46 |
MsG0380014949.01 | MsG0480020675.01 | 0.811740 | 6.019914e-51 | 3.756151e-48 |
MsG0380014949.01 | MsG0480020739.01 | 0.828941 | 6.795308e-55 | 6.853400e-52 |
MsG0380014949.01 | MsG0480020887.01 | 0.802761 | 4.812137e-49 | 2.376764e-46 |
MsG0380014949.01 | MsG0480021056.01 | 0.846950 | 1.573991e-59 | 2.754235e-56 |
MsG0380014949.01 | MsG0480021501.01 | 0.800450 | 1.432908e-48 | 6.674000e-46 |
MsG0380014949.01 | MsG0480021534.01 | 0.824712 | 6.955717e-54 | 6.210811e-51 |
MsG0380014949.01 | MsG0480021784.01 | 0.801864 | 7.362756e-49 | 3.554460e-46 |
MsG0380014949.01 | MsG0480021796.01 | 0.802843 | 4.627558e-49 | 2.290466e-46 |
MsG0380014949.01 | MsG0480021870.01 | 0.859032 | 5.474209e-63 | 1.425536e-59 |
MsG0380014949.01 | MsG0480021900.01 | 0.814894 | 1.220854e-51 | 8.292882e-49 |
MsG0380014949.01 | MsG0480021918.01 | 0.819778 | 9.713131e-53 | 7.546127e-50 |
MsG0380014949.01 | MsG0480022054.01 | 0.803100 | 4.095803e-49 | 2.040328e-46 |
MsG0380014949.01 | MsG0480022068.01 | 0.806035 | 1.000022e-49 | 5.372506e-47 |
MsG0380014949.01 | MsG0480022259.01 | 0.820230 | 7.655504e-53 | 6.022452e-50 |
MsG0380014949.01 | MsG0480022262.01 | 0.823697 | 1.204642e-53 | 1.045044e-50 |
MsG0380014949.01 | MsG0480022855.01 | 0.821635 | 3.636664e-53 | 2.974927e-50 |
MsG0380014949.01 | MsG0480022985.01 | 0.802973 | 4.350454e-49 | 2.160210e-46 |
MsG0380014949.01 | MsG0480023165.01 | 0.803372 | 3.598097e-49 | 1.804982e-46 |
MsG0380014949.01 | MsG0480023172.01 | 0.825623 | 4.238160e-54 | 3.883419e-51 |
MsG0380014949.01 | MsG0480023251.01 | 0.818836 | 1.592279e-52 | 1.205083e-49 |
MsG0380014949.01 | MsG0480023354.01 | 0.847621 | 1.030204e-59 | 1.841825e-56 |
MsG0380014949.01 | MsG0480023463.01 | 0.833099 | 6.476686e-56 | 7.383978e-53 |
MsG0380014949.01 | MsG0480023488.01 | 0.846290 | 2.382968e-59 | 4.081713e-56 |
MsG0380014949.01 | MsG0480023654.01 | 0.800899 | 1.160801e-48 | 5.468801e-46 |
MsG0380014949.01 | MsG0480023670.01 | 0.829841 | 4.107950e-55 | 4.254781e-52 |
MsG0380014949.01 | MsG0480023718.01 | 0.800633 | 1.314887e-48 | 6.152945e-46 |
MsG0380014949.01 | MsG0480023873.01 | 0.829017 | 6.513093e-55 | 6.583481e-52 |
MsG0380014949.01 | MsG0580024038.01 | 0.803964 | 2.711449e-49 | 1.381135e-46 |
MsG0380014949.01 | MsG0580024157.01 | 0.812900 | 3.360006e-51 | 2.162471e-48 |
MsG0380014949.01 | MsG0580024197.01 | 0.815827 | 7.571876e-52 | 5.276247e-49 |
MsG0380014949.01 | MsG0580024306.01 | 0.800507 | 1.395327e-48 | 6.508247e-46 |
MsG0380014949.01 | MsG0580024418.01 | 0.816660 | 4.931473e-52 | 3.515726e-49 |
MsG0380014949.01 | MsG0580024421.01 | 0.804372 | 2.229934e-49 | 1.147812e-46 |
MsG0380014949.01 | MsG0580024690.01 | 0.838814 | 2.299713e-57 | 3.115706e-54 |
MsG0380014949.01 | MsG0580024781.01 | 0.851937 | 6.409013e-61 | 1.317802e-57 |
MsG0380014949.01 | MsG0580024960.01 | 0.832548 | 8.878723e-56 | 9.956699e-53 |
MsG0380014949.01 | MsG0580025008.01 | 0.804951 | 1.687972e-49 | 8.819769e-47 |
MsG0380014949.01 | MsG0580025022.01 | 0.804898 | 1.731631e-49 | 9.035991e-47 |
MsG0380014949.01 | MsG0580025260.01 | 0.803897 | 2.799052e-49 | 1.423366e-46 |
MsG0380014949.01 | MsG0580025332.01 | 0.815913 | 7.243776e-52 | 5.059479e-49 |
MsG0380014949.01 | MsG0580025532.01 | 0.808741 | 2.667999e-50 | 1.537533e-47 |
MsG0380014949.01 | MsG0580025555.01 | 0.814991 | 1.161836e-51 | 7.913215e-49 |
MsG0380014949.01 | MsG0580025661.01 | 0.810009 | 1.426213e-50 | 8.501363e-48 |
MsG0380014949.01 | MsG0580025723.01 | 0.831524 | 1.589646e-55 | 1.729539e-52 |
MsG0380014949.01 | MsG0580025816.01 | 0.806856 | 6.711936e-50 | 3.682496e-47 |
MsG0380014949.01 | MsG0580025899.01 | 0.803002 | 4.291889e-49 | 2.132662e-46 |
MsG0380014949.01 | MsG0580025900.01 | 0.826433 | 2.719669e-54 | 2.550268e-51 |
MsG0380014949.01 | MsG0580025987.01 | 0.813860 | 2.066585e-51 | 1.365083e-48 |
MsG0380014949.01 | MsG0580026086.01 | 0.813273 | 2.781822e-51 | 1.808486e-48 |
MsG0380014949.01 | MsG0580027211.01 | 0.813223 | 2.854275e-51 | 1.852934e-48 |
MsG0380014949.01 | MsG0580027745.01 | 0.809217 | 2.110196e-50 | 1.231720e-47 |
MsG0380014949.01 | MsG0580027937.01 | 0.809862 | 1.533918e-50 | 9.107749e-48 |
MsG0380014949.01 | MsG0580027947.01 | 0.812967 | 3.247960e-51 | 2.094003e-48 |
MsG0380014949.01 | MsG0580028175.01 | 0.801557 | 8.512670e-49 | 4.077506e-46 |
MsG0380014949.01 | MsG0580028517.01 | 0.803977 | 2.694522e-49 | 1.372996e-46 |
MsG0380014949.01 | MsG0580029008.01 | 0.802218 | 6.227523e-49 | 3.033418e-46 |
MsG0380014949.01 | MsG0580029236.01 | 0.826636 | 2.433292e-54 | 2.294884e-51 |
MsG0380014949.01 | MsG0580029622.01 | 0.844693 | 6.454777e-59 | 1.050449e-55 |
MsG0380014949.01 | MsG0580029647.01 | 0.811513 | 6.742066e-51 | 4.181847e-48 |
MsG0380014949.01 | MsG0580029651.01 | 0.810608 | 1.059242e-50 | 6.413951e-48 |
MsG0380014949.01 | MsG0580029704.01 | 0.802549 | 5.321699e-49 | 2.614190e-46 |
MsG0380014949.01 | MsG0580029926.01 | 0.818656 | 1.749597e-52 | 1.317445e-49 |
MsG0380014949.01 | MsG0580029927.01 | 0.804627 | 1.972767e-49 | 1.022107e-46 |
MsG0380014949.01 | MsG0580030142.01 | 0.823515 | 1.328822e-53 | 1.146657e-50 |
MsG0380014949.01 | MsG0680030364.01 | 0.819845 | 9.376543e-53 | 7.298018e-50 |
MsG0380014949.01 | MsG0680030447.01 | 0.839041 | 2.008173e-57 | 2.739545e-54 |
MsG0380014949.01 | MsG0680030616.01 | 0.815607 | 8.479496e-52 | 5.873663e-49 |
MsG0380014949.01 | MsG0680030674.01 | 0.833787 | 4.362246e-56 | 5.076787e-53 |
MsG0380014949.01 | MsG0680030677.01 | 0.845374 | 4.227203e-59 | 7.029922e-56 |
MsG0380014949.01 | MsG0680030880.01 | 0.843282 | 1.542325e-58 | 2.401378e-55 |
MsG0380014949.01 | MsG0680030881.01 | 0.800672 | 1.291143e-48 | 6.047881e-46 |
MsG0380014949.01 | MsG0680031214.01 | 0.808062 | 3.724023e-50 | 2.108318e-47 |
MsG0380014949.01 | MsG0680031505.01 | 0.818918 | 1.525121e-52 | 1.156970e-49 |
MsG0380014949.01 | MsG0680031506.01 | 0.823766 | 1.160573e-53 | 1.008728e-50 |
MsG0380014949.01 | MsG0680032112.01 | 0.822047 | 2.919471e-53 | 2.416327e-50 |
MsG0380014949.01 | MsG0680032157.01 | 0.814597 | 1.420915e-51 | 9.575257e-49 |
MsG0380014949.01 | MsG0680032801.01 | 0.813059 | 3.100085e-51 | 2.003695e-48 |
MsG0380014949.01 | MsG0680033302.01 | 0.807482 | 4.948153e-50 | 2.759171e-47 |
MsG0380014949.01 | MsG0680033392.01 | 0.804781 | 1.831956e-49 | 9.530019e-47 |
MsG0380014949.01 | MsG0680033465.01 | 0.829194 | 5.900213e-55 | 5.996172e-52 |
MsG0380014949.01 | MsG0680034235.01 | 0.810331 | 1.215797e-50 | 7.307775e-48 |
MsG0380014949.01 | MsG0680034739.01 | 0.824792 | 6.662823e-54 | 5.962730e-51 |
MsG0380014949.01 | MsG0680034757.01 | 0.816555 | 5.205159e-52 | 3.700074e-49 |
MsG0380014949.01 | MsG0680034842.01 | 0.800397 | 1.469305e-48 | 6.834385e-46 |
MsG0380014949.01 | MsG0680035005.01 | 0.829645 | 4.584437e-55 | 4.720645e-52 |
MsG0380014949.01 | MsG0680035034.01 | 0.820754 | 5.804235e-53 | 4.632999e-50 |
MsG0380014949.01 | MsG0680035040.01 | 0.828249 | 9.983448e-55 | 9.868545e-52 |
MsG0380014949.01 | MsG0680035216.01 | 0.801802 | 7.582831e-49 | 3.654739e-46 |
MsG0380014949.01 | MsG0680035580.01 | 0.824584 | 7.458895e-54 | 6.635091e-51 |
MsG0380014949.01 | MsG0680035764.01 | 0.813451 | 2.542762e-51 | 1.661221e-48 |
MsG0380014949.01 | MsG0680035773.01 | 0.801063 | 1.074587e-48 | 5.083730e-46 |
MsG0380014949.01 | MsG0780036018.01 | 0.824867 | 6.397244e-54 | 5.737216e-51 |
MsG0380014949.01 | MsG0780036183.01 | 0.806652 | 7.412822e-50 | 4.045280e-47 |
MsG0380014949.01 | MsG0780036201.01 | 0.826978 | 2.016504e-54 | 1.920779e-51 |
MsG0380014949.01 | MsG0780036430.01 | 0.838662 | 2.517519e-57 | 3.395118e-54 |
MsG0380014949.01 | MsG0780036602.01 | 0.837586 | 4.762304e-57 | 6.214528e-54 |
MsG0380014949.01 | MsG0780036773.01 | 0.832998 | 6.862447e-56 | 7.800233e-53 |
MsG0380014949.01 | MsG0780036789.01 | 0.801132 | 1.039851e-48 | 4.928083e-46 |
MsG0380014949.01 | MsG0780037054.01 | 0.809451 | 1.880471e-50 | 1.104429e-47 |
MsG0380014949.01 | MsG0780037123.01 | 0.840706 | 7.397679e-58 | 1.062555e-54 |
MsG0380014949.01 | MsG0780037141.01 | 0.805972 | 1.031000e-49 | 5.530088e-47 |
MsG0380014949.01 | MsG0780037144.01 | 0.835182 | 1.947646e-56 | 2.363403e-53 |
MsG0380014949.01 | MsG0780037146.01 | 0.842047 | 3.281994e-58 | 4.915089e-55 |
MsG0380014949.01 | MsG0780037292.01 | 0.822680 | 2.080577e-53 | 1.753538e-50 |
MsG0380014949.01 | MsG0780037630.01 | 0.804324 | 2.281715e-49 | 1.173008e-46 |
MsG0380014949.01 | MsG0780038051.01 | 0.810545 | 1.092885e-50 | 6.606356e-48 |
MsG0380014949.01 | MsG0780038401.01 | 0.815866 | 7.423486e-52 | 5.178307e-49 |
MsG0380014949.01 | MsG0780038439.01 | 0.845341 | 4.313856e-59 | 7.166892e-56 |
MsG0380014949.01 | MsG0780038602.01 | 0.827168 | 1.815477e-54 | 1.738935e-51 |
MsG0380014949.01 | MsG0780038603.01 | 0.817300 | 3.542831e-52 | 2.570272e-49 |
MsG0380014949.01 | MsG0780038644.01 | 0.805282 | 1.439196e-49 | 7.583412e-47 |
MsG0380014949.01 | MsG0780038688.01 | 0.811302 | 7.493620e-51 | 4.621816e-48 |
MsG0380014949.01 | MsG0780038691.01 | 0.854662 | 1.060381e-61 | 2.385776e-58 |
MsG0380014949.01 | MsG0780038907.01 | 0.832576 | 8.735704e-56 | 9.804435e-53 |
MsG0380014949.01 | MsG0780039170.01 | 0.824001 | 1.022178e-53 | 8.941708e-51 |
MsG0380014949.01 | MsG0780039171.01 | 0.809729 | 1.638777e-50 | 9.696738e-48 |
MsG0380014949.01 | MsG0780039178.01 | 0.807122 | 5.897492e-50 | 3.257785e-47 |
MsG0380014949.01 | MsG0780039243.01 | 0.809782 | 1.596208e-50 | 9.458282e-48 |
MsG0380014949.01 | MsG0780039257.01 | 0.836950 | 6.926590e-57 | 8.864904e-54 |
MsG0380014949.01 | MsG0780039443.01 | 0.865747 | 4.717557e-65 | 1.551907e-61 |
MsG0380014949.01 | MsG0780039655.01 | 0.840854 | 6.767479e-58 | 9.765305e-55 |
MsG0380014949.01 | MsG0780039717.01 | 0.804919 | 1.714085e-49 | 8.949163e-47 |
MsG0380014949.01 | MsG0780040044.01 | 0.806693 | 7.265813e-50 | 3.969434e-47 |
MsG0380014949.01 | MsG0780040074.01 | 0.814704 | 1.345179e-51 | 9.091162e-49 |
MsG0380014949.01 | MsG0780040254.01 | 0.815091 | 1.104011e-51 | 7.539250e-49 |
MsG0380014949.01 | MsG0780040261.01 | 0.826950 | 2.047227e-54 | 1.948462e-51 |
MsG0380014949.01 | MsG0780040591.01 | 0.813350 | 2.675755e-51 | 1.743252e-48 |
MsG0380014949.01 | MsG0780040669.01 | 0.835766 | 1.385702e-56 | 1.711238e-53 |
MsG0380014949.01 | MsG0780040704.01 | 0.809775 | 1.601469e-50 | 9.487786e-48 |
MsG0380014949.01 | MsG0780040788.01 | 0.832164 | 1.105019e-55 | 1.225025e-52 |
MsG0380014949.01 | MsG0780041033.01 | 0.803399 | 3.551519e-49 | 1.782981e-46 |
MsG0380014949.01 | MsG0780041127.01 | 0.800065 | 1.716603e-48 | 7.917655e-46 |
MsG0380014949.01 | MsG0780041229.01 | 0.838880 | 2.210603e-57 | 3.001017e-54 |
MsG0380014949.01 | MsG0780041305.01 | 0.841036 | 6.062426e-58 | 8.796495e-55 |
MsG0380014949.01 | MsG0780041387.01 | 0.811066 | 8.432383e-51 | 5.168739e-48 |
MsG0380014949.01 | MsG0780041432.01 | 0.803720 | 3.046569e-49 | 1.542080e-46 |
MsG0380014949.01 | MsG0780041671.01 | 0.800023 | 1.750135e-48 | 8.063746e-46 |
MsG0380014949.01 | MsG0780041764.01 | 0.811487 | 6.831922e-51 | 4.234564e-48 |
MsG0380014949.01 | MsG0880042161.01 | 0.806607 | 7.577438e-50 | 4.130531e-47 |
MsG0380014949.01 | MsG0880042311.01 | 0.817931 | 2.552812e-52 | 1.884422e-49 |
MsG0380014949.01 | MsG0880042324.01 | 0.805683 | 1.185642e-49 | 6.312635e-47 |
MsG0380014949.01 | MsG0880042348.01 | 0.820995 | 5.106960e-53 | 4.104411e-50 |
MsG0380014949.01 | MsG0880042520.01 | 0.844151 | 9.030232e-59 | 1.444851e-55 |
MsG0380014949.01 | MsG0880042547.01 | 0.802495 | 5.460349e-49 | 2.678570e-46 |
MsG0380014949.01 | MsG0880042656.01 | 0.808846 | 2.533969e-50 | 1.464383e-47 |
MsG0380014949.01 | MsG0880042698.01 | 0.809895 | 1.509528e-50 | 8.970358e-48 |
MsG0380014949.01 | MsG0880042760.01 | 0.807859 | 4.114397e-50 | 2.316816e-47 |
MsG0380014949.01 | MsG0880042939.01 | 0.811474 | 6.877205e-51 | 4.261174e-48 |
MsG0380014949.01 | MsG0880043479.01 | 0.820857 | 5.494591e-53 | 4.398760e-50 |
MsG0380014949.01 | MsG0880043480.01 | 0.839843 | 1.243017e-57 | 1.738094e-54 |
MsG0380014949.01 | MsG0880043941.01 | 0.812222 | 4.726693e-51 | 2.988016e-48 |
MsG0380014949.01 | MsG0880044131.01 | 0.811343 | 7.340170e-51 | 4.531988e-48 |
MsG0380014949.01 | MsG0880044565.01 | 0.838442 | 2.869523e-57 | 3.843963e-54 |
MsG0380014949.01 | MsG0880044573.01 | 0.818232 | 2.182921e-52 | 1.624627e-49 |
MsG0380014949.01 | MsG0880045111.01 | 0.816896 | 4.366640e-52 | 3.133080e-49 |
MsG0380014949.01 | MsG0880045294.01 | 0.835024 | 2.135055e-56 | 2.578432e-53 |
MsG0380014949.01 | MsG0880045372.01 | 0.837381 | 5.375166e-57 | 6.969354e-54 |
MsG0380014949.01 | MsG0880045639.01 | 0.837773 | 4.264364e-57 | 5.597516e-54 |
MsG0380014949.01 | MsG0880045765.01 | 0.801051 | 1.080663e-48 | 5.110992e-46 |
MsG0380014949.01 | MsG0880046020.01 | 0.819697 | 1.013625e-52 | 7.856673e-50 |
MsG0380014949.01 | MsG0880046027.01 | 0.848019 | 8.000103e-60 | 1.448317e-56 |
MsG0380014949.01 | MsG0880046967.01 | 0.814099 | 1.830370e-51 | 1.216910e-48 |
MsG0380014949.01 | MsG0880047135.01 | 0.800602 | 1.334282e-48 | 6.238708e-46 |
MsG0280006491.01 | MsG0380014949.01 | 0.807882 | 4.067727e-50 | 2.291911e-47 |
MsG0280006567.01 | MsG0380014949.01 | 0.813322 | 2.714303e-51 | 1.766984e-48 |
MsG0280006601.01 | MsG0380014949.01 | 0.820823 | 5.595720e-53 | 4.475245e-50 |
MsG0280006692.01 | MsG0380014949.01 | 0.807064 | 6.067116e-50 | 3.346522e-47 |
MsG0280006770.01 | MsG0380014949.01 | 0.811487 | 6.831922e-51 | 4.234564e-48 |
MsG0280006930.01 | MsG0380014949.01 | 0.805380 | 1.372509e-49 | 7.250553e-47 |
MsG0280007072.01 | MsG0380014949.01 | 0.811375 | 7.224151e-51 | 4.464454e-48 |
MsG0280007496.01 | MsG0380014949.01 | 0.811264 | 7.638614e-51 | 4.706580e-48 |
MsG0280007527.01 | MsG0380014949.01 | 0.811380 | 7.206317e-51 | 4.453907e-48 |
MsG0280007529.01 | MsG0380014949.01 | 0.826805 | 2.217392e-54 | 2.101374e-51 |
MsG0280007531.01 | MsG0380014949.01 | 0.839073 | 1.970359e-57 | 2.690638e-54 |
MsG0280007710.01 | MsG0380014949.01 | 0.814985 | 1.165787e-51 | 7.938581e-49 |
MsG0280007955.01 | MsG0380014949.01 | 0.808827 | 2.557200e-50 | 1.477081e-47 |
MsG0280007984.01 | MsG0380014949.01 | 0.804525 | 2.072227e-49 | 1.070780e-46 |
MsG0280008030.01 | MsG0380014949.01 | 0.824484 | 7.873599e-54 | 6.983187e-51 |
MsG0280008112.01 | MsG0380014949.01 | 0.807941 | 3.951683e-50 | 2.230027e-47 |
MsG0280008363.01 | MsG0380014949.01 | 0.838844 | 2.258361e-57 | 3.062495e-54 |
MsG0280008378.01 | MsG0380014949.01 | 0.811233 | 7.756069e-51 | 4.775194e-48 |
MsG0280008457.01 | MsG0380014949.01 | 0.800823 | 1.202573e-48 | 5.654431e-46 |
MsG0280008615.01 | MsG0380014949.01 | 0.830521 | 2.802551e-55 | 2.959765e-52 |
MsG0280008765.01 | MsG0380014949.01 | 0.834978 | 2.191707e-56 | 2.643556e-53 |
MsG0280008894.01 | MsG0380014949.01 | 0.806026 | 1.004334e-49 | 5.394424e-47 |
MsG0280008909.01 | MsG0380014949.01 | 0.809095 | 2.241555e-50 | 1.304099e-47 |
MsG0280009417.01 | MsG0380014949.01 | 0.817652 | 2.951333e-52 | 2.161901e-49 |
MsG0280009421.01 | MsG0380014949.01 | 0.817958 | 2.516788e-52 | 1.859146e-49 |
MsG0280009596.01 | MsG0380014949.01 | 0.806652 | 7.414934e-50 | 4.046368e-47 |
MsG0280009748.01 | MsG0380014949.01 | 0.834719 | 2.546997e-56 | 3.047707e-53 |
MsG0280010109.01 | MsG0380014949.01 | 0.839686 | 1.366359e-57 | 1.901189e-54 |
MsG0280010158.01 | MsG0380014949.01 | 0.808089 | 3.676096e-50 | 2.082699e-47 |
MsG0280010184.01 | MsG0380014949.01 | 0.800161 | 1.640634e-48 | 7.585474e-46 |
MsG0280010349.01 | MsG0380014949.01 | 0.817550 | 3.112151e-52 | 2.273366e-49 |
MsG0280010350.01 | MsG0380014949.01 | 0.831839 | 1.329169e-55 | 1.459814e-52 |
MsG0280010366.01 | MsG0380014949.01 | 0.829368 | 5.352750e-55 | 5.467816e-52 |
MsG0280010517.01 | MsG0380014949.01 | 0.821100 | 4.831536e-53 | 3.894119e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014949.01.T01 | MTR_3g466480 | 60.000 | 170 | 52 | 3 | 26 | 195 | 262 | 415 | 3.70e-56 | 184 |
MsG0380014949.01.T01 | MTR_3g466440 | 61.475 | 122 | 10 | 1 | 1 | 85 | 1 | 122 | 1.51e-35 | 131 |
MsG0380014949.01.T01 | MTR_3g466440 | 51.724 | 87 | 12 | 4 | 34 | 92 | 156 | 240 | 9.81e-12 | 63.5 |
MsG0380014949.01.T01 | MTR_5g075100 | 43.275 | 171 | 78 | 4 | 26 | 195 | 265 | 417 | 3.80e-25 | 101 |
MsG0380014949.01.T01 | MTR_7g072605 | 40.541 | 111 | 63 | 1 | 88 | 195 | 297 | 407 | 1.29e-15 | 74.3 |
MsG0380014949.01.T01 | MTR_8g086380 | 38.261 | 115 | 66 | 2 | 85 | 195 | 350 | 463 | 5.79e-13 | 67.0 |
MsG0380014949.01.T01 | MTR_2g016280 | 29.064 | 203 | 119 | 7 | 16 | 195 | 223 | 423 | 3.63e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014949.01.T01 | AT5G01820 | 39.091 | 110 | 64 | 1 | 89 | 195 | 310 | 419 | 4.26e-18 | 81.6 |
MsG0380014949.01.T01 | AT2G30360 | 38.889 | 126 | 71 | 2 | 75 | 194 | 293 | 418 | 6.64e-17 | 78.2 |
MsG0380014949.01.T01 | AT4G18700 | 35.652 | 115 | 69 | 2 | 85 | 195 | 337 | 450 | 9.68e-14 | 69.3 |
MsG0380014949.01.T01 | AT5G45810 | 32.759 | 116 | 72 | 2 | 85 | 195 | 341 | 455 | 1.28e-11 | 63.2 |
Find 47 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAGGTTGAATGGTAATTT+TGG | 0.156297 | 3:-62938568 | MsG0380014949.01.T01:CDS |
TATATCATTTACTTCCAATT+TGG | 0.186596 | 3:-62938737 | MsG0380014949.01.T01:CDS |
GAGAGAGGTGATAGAGAAAA+TGG | 0.190882 | 3:-62939491 | MsG0380014949.01.T01:CDS |
TTGGATTTGTCTGGATTGTT+TGG | 0.276292 | 3:-62938718 | MsG0380014949.01.T01:CDS |
GGATTGTTTGGGGAATTTGA+TGG | 0.292044 | 3:-62938706 | MsG0380014949.01.T01:CDS |
TGATAGAGAAAATGGGTATA+AGG | 0.292592 | 3:-62939483 | MsG0380014949.01.T01:CDS |
GGAGTCGCCGGAGAGGATTT+TGG | 0.326816 | 3:-62938662 | MsG0380014949.01.T01:CDS |
CAATCCAGACAAATCCAAAT+TGG | 0.348070 | 3:+62938723 | None:intergenic |
TTGGAGGTGGTGGAGGAGGT+TGG | 0.349271 | 3:-62938643 | MsG0380014949.01.T01:CDS |
GAAATTCTTACACCAACTTT+AGG | 0.349556 | 3:+62939596 | None:intergenic |
GGAGGAGGTTGGAGCGGCGG+AGG | 0.356634 | 3:-62938632 | MsG0380014949.01.T01:CDS |
GATAGAGAAAATGGGTATAA+GGG | 0.364549 | 3:-62939482 | MsG0380014949.01.T01:CDS |
GATTGTTTGGGGAATTTGAT+GGG | 0.365511 | 3:-62938705 | MsG0380014949.01.T01:CDS |
GAATTGAGATTGAGGTTTAT+CGG | 0.368768 | 3:-62938546 | MsG0380014949.01.T01:CDS |
GTAACAGATGAAGGGTTTAG+AGG | 0.369803 | 3:-62939554 | MsG0380014949.01.T01:CDS |
TGGATTTGTCTGGATTGTTT+GGG | 0.374891 | 3:-62938717 | MsG0380014949.01.T01:CDS |
ACTTCCAATTTGGATTTGTC+TGG | 0.387787 | 3:-62938727 | MsG0380014949.01.T01:CDS |
GGTGGAGGAGGTTGGAGCGG+CGG | 0.405214 | 3:-62938635 | MsG0380014949.01.T01:CDS |
AACTTTGGAGGAATCGAATC+AGG | 0.418956 | 3:-62939440 | MsG0380014949.01.T01:CDS |
CGGCGGAGGGAATGGCGTTA+AGG | 0.429904 | 3:-62938618 | MsG0380014949.01.T01:CDS |
TCTAGAATTGTAACAGATGA+AGG | 0.438012 | 3:-62939563 | MsG0380014949.01.T01:CDS |
GGTGGTGGAGGAGGTTGGAG+CGG | 0.469507 | 3:-62938638 | MsG0380014949.01.T01:CDS |
GGTTGGAGCGGCGGAGGGAA+TGG | 0.473370 | 3:-62938626 | MsG0380014949.01.T01:CDS |
AGAGAGGTGATAGAGAAAAT+GGG | 0.489685 | 3:-62939490 | MsG0380014949.01.T01:CDS |
AGAGGAGGTGGCGATGGTTG+AGG | 0.505484 | 3:-62938518 | MsG0380014949.01.T01:CDS |
GAAAGAATGTGGGGTAGAGT+TGG | 0.508521 | 3:-62938590 | MsG0380014949.01.T01:CDS |
GAGGAGGTTGGAGCGGCGGA+GGG | 0.535656 | 3:-62938631 | MsG0380014949.01.T01:CDS |
CGGAGGGAATGGCGTTAAGG+TGG | 0.544084 | 3:-62938615 | MsG0380014949.01.T01:CDS |
GTAGAGTTGGAAAGGTTGAA+TGG | 0.553562 | 3:-62938577 | MsG0380014949.01.T01:CDS |
TTATCGGTTAACAGAGGAGG+TGG | 0.557119 | 3:-62938530 | MsG0380014949.01.T01:CDS |
AGAGGAAATGAAGAAAAGAG+TGG | 0.559097 | 3:-62939536 | MsG0380014949.01.T01:CDS |
GTTAACAGAGGAGGTGGCGA+TGG | 0.567129 | 3:-62938524 | MsG0380014949.01.T01:CDS |
GGATTTGTCTGGATTGTTTG+GGG | 0.577981 | 3:-62938716 | MsG0380014949.01.T01:CDS |
AATGTGGGGTAGAGTTGGAA+AGG | 0.583569 | 3:-62938585 | MsG0380014949.01.T01:CDS |
ACCACCTCCAAAATCCTCTC+CGG | 0.584270 | 3:+62938655 | None:intergenic |
TAAGGTGGAAGAAAGAATGT+GGG | 0.587111 | 3:-62938600 | MsG0380014949.01.T01:CDS |
ATAGAGAAAATGGGTATAAG+GGG | 0.591187 | 3:-62939481 | MsG0380014949.01.T01:CDS |
CTAGAATTGTAACAGATGAA+GGG | 0.596944 | 3:-62939562 | MsG0380014949.01.T01:CDS |
ATTGTTTGGGGAATTTGATG+GGG | 0.597233 | 3:-62938704 | MsG0380014949.01.T01:CDS |
TTAAGGTGGAAGAAAGAATG+TGG | 0.601430 | 3:-62938601 | MsG0380014949.01.T01:CDS |
GAATCGAATCAGGTGAAGAG+AGG | 0.602159 | 3:-62939430 | MsG0380014949.01.T01:CDS |
GGTTTATCGGTTAACAGAGG+AGG | 0.605432 | 3:-62938533 | MsG0380014949.01.T01:CDS |
TTGAAGCATAATGTCTACTG+AGG | 0.630230 | 3:-62939648 | None:intergenic |
ATGGTTGAGGTACAGAGGAG+AGG | 0.648476 | 3:-62938505 | MsG0380014949.01.T01:CDS |
TGAGGTTTATCGGTTAACAG+AGG | 0.655322 | 3:-62938536 | MsG0380014949.01.T01:CDS |
TGGCGATGGTTGAGGTACAG+AGG | 0.656722 | 3:-62938510 | MsG0380014949.01.T01:CDS |
AAGGTGGAAGAAAGAATGTG+GGG | 0.692861 | 3:-62938599 | MsG0380014949.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGAAAAATTCATAAAAGAT+GGG | - | Chr3:62938907-62938926 | MsG0380014949.01.T01:intron | 15.0% |
!!! | AATTCACCTTTATAAATTTT+TGG | + | Chr3:62939112-62939131 | None:intergenic | 15.0% |
!!! | ATTCACCTTTATAAATTTTT+GGG | + | Chr3:62939111-62939130 | None:intergenic | 15.0% |
!!! | ATTTTCCCAAAAATTTATAA+AGG | - | Chr3:62939103-62939122 | MsG0380014949.01.T01:intron | 15.0% |
!!! | TTAAAGTTTAAATGTGTTTT+TGG | - | Chr3:62938738-62938757 | MsG0380014949.01.T01:CDS | 15.0% |
!! | AAAATTATTGGATACAAACT+CGG | - | Chr3:62939174-62939193 | MsG0380014949.01.T01:intron | 20.0% |
!! | GAAAAATTGACATATTTACA+GGG | + | Chr3:62938765-62938784 | None:intergenic | 20.0% |
!! | GTAGAAAAATTCATAAAAGA+TGG | - | Chr3:62938906-62938925 | MsG0380014949.01.T01:intron | 20.0% |
!! | TACATATGAGTTTACTTTAT+AGG | + | Chr3:62938860-62938879 | None:intergenic | 20.0% |
!! | TATATCATTTACTTCCAATT+TGG | - | Chr3:62939354-62939373 | MsG0380014949.01.T01:intron | 20.0% |
! | ATTAGAAAAAAGCCTAAAGT+TGG | - | Chr3:62938483-62938502 | MsG0380014949.01.T01:CDS | 25.0% |
! | CGAAAAATTGACATATTTAC+AGG | + | Chr3:62938766-62938785 | None:intergenic | 25.0% |
! | TATGAGTTTACTTTATAGGA+TGG | + | Chr3:62938856-62938875 | None:intergenic | 25.0% |
! | TTGAAGAAAAATGTGAACTT+TGG | - | Chr3:62938636-62938655 | MsG0380014949.01.T01:CDS | 25.0% |
! | TTTATAAGGAATATATCCAG+CGG | + | Chr3:62938715-62938734 | None:intergenic | 25.0% |
!! | GCGATTTTTGTCAAAATTAT+TGG | - | Chr3:62939162-62939181 | MsG0380014949.01.T01:intron | 25.0% |
!!! | AAGTTTTATGAGGAAGATTA+TGG | - | Chr3:62939262-62939281 | MsG0380014949.01.T01:intron | 25.0% |
!!! | ATAATTTTGACAAAAATCGC+TGG | + | Chr3:62939162-62939181 | None:intergenic | 25.0% |
!!! | TAATTTTGGAATTGAGATTG+AGG | - | Chr3:62939537-62939556 | MsG0380014949.01.T01:CDS | 25.0% |
AAGAAAAATGTGAACTTTGG+AGG | - | Chr3:62938639-62938658 | MsG0380014949.01.T01:CDS | 30.0% | |
AATTCATAAAAGATGGGTCT+CGG | - | Chr3:62938913-62938932 | MsG0380014949.01.T01:intron | 30.0% | |
ATAGAGAAAATGGGTATAAG+GGG | - | Chr3:62938610-62938629 | MsG0380014949.01.T01:CDS | 30.0% | |
CTAGAATTGTAACAGATGAA+GGG | - | Chr3:62938529-62938548 | MsG0380014949.01.T01:CDS | 30.0% | |
GAAATTCTTACACCAACTTT+AGG | + | Chr3:62938498-62938517 | None:intergenic | 30.0% | |
GAATTGAGATTGAGGTTTAT+CGG | - | Chr3:62939545-62939564 | MsG0380014949.01.T01:CDS | 30.0% | |
GATAGAGAAAATGGGTATAA+GGG | - | Chr3:62938609-62938628 | MsG0380014949.01.T01:CDS | 30.0% | |
TGAAGATGGGAAAATTTAGA+GGG | + | Chr3:62938825-62938844 | None:intergenic | 30.0% | |
TGATAGAGAAAATGGGTATA+AGG | - | Chr3:62938608-62938627 | MsG0380014949.01.T01:CDS | 30.0% | |
! | AATTTTCCCATCTTCACTTT+TGG | - | Chr3:62938829-62938848 | MsG0380014949.01.T01:intron | 30.0% |
! | AGTGTTTTCCTAAAACTAGA+GGG | - | Chr3:62939037-62939056 | MsG0380014949.01.T01:intron | 30.0% |
! | GAAAGGTTGAATGGTAATTT+TGG | - | Chr3:62939523-62939542 | MsG0380014949.01.T01:CDS | 30.0% |
! | TCTAGAATTGTAACAGATGA+AGG | - | Chr3:62938528-62938547 | MsG0380014949.01.T01:CDS | 30.0% |
!! | AGAAGAAAGTTTTATGAGAG+AGG | - | Chr3:62938585-62938604 | MsG0380014949.01.T01:CDS | 30.0% |
!! | CAAGGAGATAAAGTTTTATG+AGG | - | Chr3:62939252-62939271 | MsG0380014949.01.T01:intron | 30.0% |
ACTTCCAATTTGGATTTGTC+TGG | - | Chr3:62939364-62939383 | MsG0380014949.01.T01:intron | 35.0% | |
ACTTGTGTTCTTCTCACTAA+CGG | - | Chr3:62938987-62939006 | MsG0380014949.01.T01:intron | 35.0% | |
AGAGAGGTGATAGAGAAAAT+GGG | - | Chr3:62938601-62938620 | MsG0380014949.01.T01:CDS | 35.0% | |
AGAGGAAATGAAGAAAAGAG+TGG | - | Chr3:62938555-62938574 | MsG0380014949.01.T01:CDS | 35.0% | |
ATTGTTTGGGGAATTTGATG+GGG | - | Chr3:62939387-62939406 | MsG0380014949.01.T01:intron | 35.0% | |
CAATCCAGACAAATCCAAAT+TGG | + | Chr3:62939371-62939390 | None:intergenic | 35.0% | |
GATTGTTTGGGGAATTTGAT+GGG | - | Chr3:62939386-62939405 | MsG0380014949.01.T01:intron | 35.0% | |
GTGAAGATGGGAAAATTTAG+AGG | + | Chr3:62938826-62938845 | None:intergenic | 35.0% | |
TAAGGTGGAAGAAAGAATGT+GGG | - | Chr3:62939491-62939510 | MsG0380014949.01.T01:CDS | 35.0% | |
TGGATTTGTCTGGATTGTTT+GGG | - | Chr3:62939374-62939393 | MsG0380014949.01.T01:intron | 35.0% | |
TTAAGGTGGAAGAAAGAATG+TGG | - | Chr3:62939490-62939509 | MsG0380014949.01.T01:CDS | 35.0% | |
TTGGATTTGTCTGGATTGTT+TGG | - | Chr3:62939373-62939392 | MsG0380014949.01.T01:intron | 35.0% | |
! | GAGTGTTTTCCTAAAACTAG+AGG | - | Chr3:62939036-62939055 | MsG0380014949.01.T01:intron | 35.0% |
! | GTGTTTTCCTAAAACTAGAG+GGG | - | Chr3:62939038-62939057 | MsG0380014949.01.T01:intron | 35.0% |
! | TGTCTACTGAGGAAGTTTTA+AGG | - | Chr3:62938454-62938473 | MsG0380014949.01.T01:CDS | 35.0% |
! | TTGTACCCTTTTCTAAACCA+CGG | + | Chr3:62939235-62939254 | None:intergenic | 35.0% |
!! | AGCGACTTTTAGTGATTTGT+GGG | - | Chr3:62939618-62939637 | MsG0380014949.01.T01:CDS | 35.0% |
!!! | CTGAGGAAGTTTTAAGGAAT+AGG | - | Chr3:62938460-62938479 | MsG0380014949.01.T01:CDS | 35.0% |
!!! | GGCAGAGCATTTTGTTTTAT+GGG | - | Chr3:62939408-62939427 | MsG0380014949.01.T01:CDS | 35.0% |
AAGGTGGAAGAAAGAATGTG+GGG | - | Chr3:62939492-62939511 | MsG0380014949.01.T01:CDS | 40.0% | |
ATGGATACGAGTACGAGTTT+GGG | - | Chr3:62939281-62939300 | MsG0380014949.01.T01:intron | 40.0% | |
GAGAGAGGTGATAGAGAAAA+TGG | - | Chr3:62938600-62938619 | MsG0380014949.01.T01:CDS | 40.0% | |
GATGGACCAAAAGTGAAGAT+GGG | + | Chr3:62938838-62938857 | None:intergenic | 40.0% | |
GGATTGTTTGGGGAATTTGA+TGG | - | Chr3:62939385-62939404 | MsG0380014949.01.T01:intron | 40.0% | |
GGATTTGTCTGGATTGTTTG+GGG | - | Chr3:62939375-62939394 | MsG0380014949.01.T01:intron | 40.0% | |
GGTGCTAAGTGTTAACTCAA+GGG | - | Chr3:62939008-62939027 | MsG0380014949.01.T01:intron | 40.0% | |
GTAACAGATGAAGGGTTTAG+AGG | - | Chr3:62938537-62938556 | MsG0380014949.01.T01:CDS | 40.0% | |
GTAGAGTTGGAAAGGTTGAA+TGG | - | Chr3:62939514-62939533 | MsG0380014949.01.T01:CDS | 40.0% | |
GTGCTAAGTGTTAACTCAAG+GGG | - | Chr3:62939009-62939028 | MsG0380014949.01.T01:intron | 40.0% | |
TATGGATACGAGTACGAGTT+TGG | - | Chr3:62939280-62939299 | MsG0380014949.01.T01:intron | 40.0% | |
TCACGGTTGACGGTATTAAT+CGG | - | Chr3:62939206-62939225 | MsG0380014949.01.T01:intron | 40.0% | |
! | AACTTTGGAGGAATCGAATC+AGG | - | Chr3:62938651-62938670 | MsG0380014949.01.T01:CDS | 40.0% |
! | CAGCGACTTTTAGTGATTTG+TGG | - | Chr3:62939617-62939636 | MsG0380014949.01.T01:CDS | 40.0% |
! | GTGGTTTAGAAAAGGGTACA+AGG | - | Chr3:62939234-62939253 | MsG0380014949.01.T01:intron | 40.0% |
! | TGAGGTTTATCGGTTAACAG+AGG | - | Chr3:62939555-62939574 | MsG0380014949.01.T01:CDS | 40.0% |
! | TTTTATGAGAGAGTAACCGC+TGG | - | Chr3:62938696-62938715 | MsG0380014949.01.T01:CDS | 40.0% |
!!! | CAAACATCCCCTCTAGTTTT+AGG | + | Chr3:62939048-62939067 | None:intergenic | 40.0% |
!!! | GGGCAGAGCATTTTGTTTTA+TGG | - | Chr3:62939407-62939426 | MsG0380014949.01.T01:CDS | 40.0% |
!!! | TTTTGTTTTATGGGAGTCGC+CGG | - | Chr3:62939417-62939436 | MsG0380014949.01.T01:CDS | 40.0% |
AAACTCGGAAACCCAGATCA+CGG | - | Chr3:62939189-62939208 | MsG0380014949.01.T01:intron | 45.0% | |
AAATTACGATGACCTCCCTC+AGG | + | Chr3:62939087-62939106 | None:intergenic | 45.0% | |
AAGTGTCCACGTTGGATGAT+AGG | - | Chr3:62939133-62939152 | MsG0380014949.01.T01:intron | 45.0% | |
AATACCGTCAACCGTGATCT+GGG | + | Chr3:62939203-62939222 | None:intergenic | 45.0% | |
AATGTGGGGTAGAGTTGGAA+AGG | - | Chr3:62939506-62939525 | MsG0380014949.01.T01:CDS | 45.0% | |
AATTACGATGACCTCCCTCA+GGG | + | Chr3:62939086-62939105 | None:intergenic | 45.0% | |
CACGGTTGACGGTATTAATC+GGG | - | Chr3:62939207-62939226 | MsG0380014949.01.T01:intron | 45.0% | |
CTAAGTGTTAACTCAAGGGG+AGG | - | Chr3:62939012-62939031 | MsG0380014949.01.T01:intron | 45.0% | |
GAAAGAATGTGGGGTAGAGT+TGG | - | Chr3:62939501-62939520 | MsG0380014949.01.T01:CDS | 45.0% | |
GAATCGAATCAGGTGAAGAG+AGG | - | Chr3:62938661-62938680 | MsG0380014949.01.T01:CDS | 45.0% | |
GGATGGACCAAAAGTGAAGA+TGG | + | Chr3:62938839-62938858 | None:intergenic | 45.0% | |
GGGATCCGTGGTTTAGAAAA+GGG | - | Chr3:62939227-62939246 | MsG0380014949.01.T01:intron | 45.0% | |
GGTTCAGGTGTAAACGTGAT+GGG | - | Chr3:62939302-62939321 | MsG0380014949.01.T01:intron | 45.0% | |
GTGAATTCAAGTGTCCACGT+TGG | - | Chr3:62939125-62939144 | MsG0380014949.01.T01:intron | 45.0% | |
TAATACCGTCAACCGTGATC+TGG | + | Chr3:62939204-62939223 | None:intergenic | 45.0% | |
! | CGGTGCTAAGTGTTAACTCA+AGG | - | Chr3:62939007-62939026 | MsG0380014949.01.T01:intron | 45.0% |
! | GAGGGGATGTTTGTGTTGTT+TGG | - | Chr3:62939055-62939074 | MsG0380014949.01.T01:intron | 45.0% |
! | GGTTTATCGGTTAACAGAGG+AGG | - | Chr3:62939558-62939577 | MsG0380014949.01.T01:CDS | 45.0% |
! | GTTGTTTGGTGAAACCCTGA+GGG | - | Chr3:62939069-62939088 | MsG0380014949.01.T01:intron | 45.0% |
! | TGTTGTTTGGTGAAACCCTG+AGG | - | Chr3:62939068-62939087 | MsG0380014949.01.T01:intron | 45.0% |
! | TTATCGGTTAACAGAGGAGG+TGG | - | Chr3:62939561-62939580 | MsG0380014949.01.T01:CDS | 45.0% |
!!! | TTAAACTTTAATTTTTTATA+AGG | + | Chr3:62938729-62938748 | None:intergenic | 5.0% |
AAAGATGGGTCTCGGACTCT+CGG | - | Chr3:62938921-62938940 | MsG0380014949.01.T01:intron | 50.0% | |
ACCACCTCCAAAATCCTCTC+CGG | + | Chr3:62939439-62939458 | None:intergenic | 50.0% | |
ACGGTATTAATCGGGATCCG+TGG | - | Chr3:62939215-62939234 | MsG0380014949.01.T01:intron | 50.0% | |
ATGGTTGAGGTACAGAGGAG+AGG | - | Chr3:62939586-62939605 | MsG0380014949.01.T01:CDS | 50.0% | |
CGGGATCCGTGGTTTAGAAA+AGG | - | Chr3:62939226-62939245 | MsG0380014949.01.T01:intron | 50.0% | |
GAAACCCAGATCACGGTTGA+CGG | - | Chr3:62939196-62939215 | MsG0380014949.01.T01:intron | 50.0% | |
GGGTTCAGGTGTAAACGTGA+TGG | - | Chr3:62939301-62939320 | MsG0380014949.01.T01:intron | 50.0% | |
TGGAGACCTATCATCCAACG+TGG | + | Chr3:62939142-62939161 | None:intergenic | 50.0% | |
! | ACGAGTACGAGTTTGGGTTC+AGG | - | Chr3:62939287-62939306 | MsG0380014949.01.T01:intron | 50.0% |
!! | CAGGTGTAAACGTGATGGGT+AGG | - | Chr3:62939306-62939325 | MsG0380014949.01.T01:intron | 50.0% |
GTTAACAGAGGAGGTGGCGA+TGG | - | Chr3:62939567-62939586 | MsG0380014949.01.T01:CDS | 55.0% | |
TGGCGATGGTTGAGGTACAG+AGG | - | Chr3:62939581-62939600 | MsG0380014949.01.T01:CDS | 55.0% | |
! | GTTTGGTGAAACCCTGAGGG+AGG | - | Chr3:62939072-62939091 | MsG0380014949.01.T01:intron | 55.0% |
! | TTTTATGGGAGTCGCCGGAG+AGG | - | Chr3:62939422-62939441 | MsG0380014949.01.T01:CDS | 55.0% |
!! | GAGGATTTTGGAGGTGGTGG+AGG | - | Chr3:62939441-62939460 | MsG0380014949.01.T01:CDS | 55.0% |
!! | GGAGAGGATTTTGGAGGTGG+TGG | - | Chr3:62939438-62939457 | MsG0380014949.01.T01:CDS | 55.0% |
!!! | GATTTTGGAGGTGGTGGAGG+AGG | - | Chr3:62939444-62939463 | MsG0380014949.01.T01:CDS | 55.0% |
AGAGGAGGTGGCGATGGTTG+AGG | - | Chr3:62939573-62939592 | MsG0380014949.01.T01:CDS | 60.0% | |
CGGAGGGAATGGCGTTAAGG+TGG | - | Chr3:62939476-62939495 | MsG0380014949.01.T01:CDS | 60.0% | |
! | GGAGTCGCCGGAGAGGATTT+TGG | - | Chr3:62939429-62939448 | MsG0380014949.01.T01:CDS | 60.0% |
! | GTCGCCGGAGAGGATTTTGG+AGG | - | Chr3:62939432-62939451 | MsG0380014949.01.T01:CDS | 60.0% |
!! | GCCGGAGAGGATTTTGGAGG+TGG | - | Chr3:62939435-62939454 | MsG0380014949.01.T01:CDS | 60.0% |
!! | TTGGAGGTGGTGGAGGAGGT+TGG | - | Chr3:62939448-62939467 | MsG0380014949.01.T01:CDS | 60.0% |
CGGCGGAGGGAATGGCGTTA+AGG | - | Chr3:62939473-62939492 | MsG0380014949.01.T01:CDS | 65.0% | |
!! | GGTGGTGGAGGAGGTTGGAG+CGG | - | Chr3:62939453-62939472 | MsG0380014949.01.T01:CDS | 65.0% |
GAGGAGGTTGGAGCGGCGGA+GGG | - | Chr3:62939460-62939479 | MsG0380014949.01.T01:CDS | 70.0% | |
GGTGGAGGAGGTTGGAGCGG+CGG | - | Chr3:62939456-62939475 | MsG0380014949.01.T01:CDS | 70.0% | |
GGTTGGAGCGGCGGAGGGAA+TGG | - | Chr3:62939465-62939484 | MsG0380014949.01.T01:CDS | 70.0% | |
GGAGGAGGTTGGAGCGGCGG+AGG | - | Chr3:62939459-62939478 | MsG0380014949.01.T01:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 62938453 | 62939660 | 62938453 | ID=MsG0380014949.01;Name=MsG0380014949.01 |
Chr3 | mRNA | 62938453 | 62939660 | 62938453 | ID=MsG0380014949.01.T01;Parent=MsG0380014949.01;Name=MsG0380014949.01.T01;_AED=0.49;_eAED=0.71;_QI=0|0|0|1|1|1|2|0|195 |
Chr3 | exon | 62939406 | 62939660 | 62939406 | ID=MsG0380014949.01.T01:exon:8539;Parent=MsG0380014949.01.T01 |
Chr3 | exon | 62938453 | 62938785 | 62938453 | ID=MsG0380014949.01.T01:exon:8538;Parent=MsG0380014949.01.T01 |
Chr3 | CDS | 62939406 | 62939660 | 62939406 | ID=MsG0380014949.01.T01:cds;Parent=MsG0380014949.01.T01 |
Chr3 | CDS | 62938453 | 62938785 | 62938453 | ID=MsG0380014949.01.T01:cds;Parent=MsG0380014949.01.T01 |
Gene Sequence |
Protein sequence |