Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020957.01.T01 | XP_013456124.1 | 96.743 | 307 | 10 | 0 | 1 | 307 | 1 | 307 | 0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020957.01.T01 | Q8CHU3 | 32.24 | 183 | 100 | 4 | 33 | 208 | 20 | 185 | 1.81E-20 | 95.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020957.01.T01 | A0A072UWA8 | 96.743 | 307 | 10 | 0 | 1 | 307 | 1 | 307 | 0.0 | 614 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0480020957.01 | -0.857941 | 1.157691e-62 | 2.906220e-59 |
| MsG0080048036.01 | MsG0480020957.01 | 0.805681 | 1.186878e-49 | 6.318841e-47 |
| MsG0080048059.01 | MsG0480020957.01 | -0.802227 | 6.200524e-49 | 3.020987e-46 |
| MsG0080048302.01 | MsG0480020957.01 | 0.826009 | 3.431219e-54 | 3.178937e-51 |
| MsG0080048347.01 | MsG0480020957.01 | 0.813560 | 2.405654e-51 | 1.576204e-48 |
| MsG0080048352.01 | MsG0480020957.01 | 0.818589 | 1.811114e-52 | 1.361331e-49 |
| MsG0080048692.01 | MsG0480020957.01 | -0.825786 | 3.875561e-54 | 3.567935e-51 |
| MsG0080048694.01 | MsG0480020957.01 | -0.840734 | 7.273445e-58 | 1.045632e-54 |
| MsG0080048695.01 | MsG0480020957.01 | -0.840763 | 7.147013e-58 | 1.028376e-54 |
| MsG0080048697.01 | MsG0480020957.01 | -0.820324 | 7.284388e-53 | 5.745366e-50 |
| MsG0080048813.01 | MsG0480020957.01 | -0.800868 | 1.177917e-48 | 5.544925e-46 |
| MsG0080048889.01 | MsG0480020957.01 | 0.859908 | 2.985461e-63 | 8.014146e-60 |
| MsG0080048919.01 | MsG0480020957.01 | -0.802514 | 5.411997e-49 | 2.656102e-46 |
| MsG0080048978.01 | MsG0480020957.01 | -0.803378 | 3.587361e-49 | 1.799891e-46 |
| MsG0080049015.01 | MsG0480020957.01 | -0.831763 | 1.388499e-55 | 1.521526e-52 |
| MsG0080049019.01 | MsG0480020957.01 | -0.821873 | 3.203446e-53 | 2.638448e-50 |
| MsG0080049023.01 | MsG0480020957.01 | -0.811375 | 7.224260e-51 | 4.464509e-48 |
| MsG0080049038.01 | MsG0480020957.01 | -0.841079 | 5.906321e-58 | 8.580647e-55 |
| MsG0080049042.01 | MsG0480020957.01 | 0.811692 | 6.163905e-51 | 3.841028e-48 |
| MsG0080049066.01 | MsG0480020957.01 | -0.847089 | 1.441868e-59 | 2.534588e-56 |
| MsG0080049076.01 | MsG0480020957.01 | -0.844622 | 6.746842e-59 | 1.095543e-55 |
| MsG0080049133.01 | MsG0480020957.01 | -0.821185 | 4.617192e-53 | 3.730242e-50 |
| MsG0180000337.01 | MsG0480020957.01 | 0.806323 | 8.698298e-50 | 4.707378e-47 |
| MsG0180000367.01 | MsG0480020957.01 | 0.821050 | 4.960012e-53 | 3.992395e-50 |
| MsG0180000399.01 | MsG0480020957.01 | 0.805192 | 1.502868e-49 | 7.900871e-47 |
| MsG0180000467.01 | MsG0480020957.01 | -0.808126 | 3.608899e-50 | 2.046642e-47 |
| MsG0180000583.01 | MsG0480020957.01 | 0.814680 | 1.361726e-51 | 9.196962e-49 |
| MsG0180000719.01 | MsG0480020957.01 | -0.819693 | 1.015562e-52 | 7.870786e-50 |
| MsG0180001054.01 | MsG0480020957.01 | -0.802803 | 4.717870e-49 | 2.332699e-46 |
| MsG0180001072.01 | MsG0480020957.01 | -0.858337 | 8.830508e-63 | 2.246009e-59 |
| MsG0180001108.01 | MsG0480020957.01 | 0.800614 | 1.326645e-48 | 6.204939e-46 |
| MsG0180001513.01 | MsG0480020957.01 | 0.821653 | 3.601932e-53 | 2.948073e-50 |
| MsG0180001925.01 | MsG0480020957.01 | -0.847924 | 8.499434e-60 | 1.534269e-56 |
| MsG0180002099.01 | MsG0480020957.01 | -0.846409 | 2.211757e-59 | 3.803650e-56 |
| MsG0180002214.01 | MsG0480020957.01 | -0.849795 | 2.570740e-60 | 4.930290e-57 |
| MsG0180002425.01 | MsG0480020957.01 | -0.836169 | 1.095182e-56 | 1.369174e-53 |
| MsG0180002426.01 | MsG0480020957.01 | -0.834717 | 2.550876e-56 | 3.052064e-53 |
| MsG0180002439.01 | MsG0480020957.01 | -0.815117 | 1.089312e-51 | 7.444205e-49 |
| MsG0180002546.01 | MsG0480020957.01 | -0.843622 | 1.251178e-58 | 1.969157e-55 |
| MsG0180002808.01 | MsG0480020957.01 | 0.805675 | 1.190420e-49 | 6.336517e-47 |
| MsG0180002935.01 | MsG0480020957.01 | 0.867861 | 1.001820e-65 | 3.549893e-62 |
| MsG0180003235.01 | MsG0480020957.01 | 0.810094 | 1.367564e-50 | 8.169286e-48 |
| MsG0180003484.01 | MsG0480020957.01 | 0.813685 | 2.258204e-51 | 1.484661e-48 |
| MsG0180003757.01 | MsG0480020957.01 | -0.856597 | 2.888928e-62 | 6.932190e-59 |
| MsG0180003779.01 | MsG0480020957.01 | -0.817691 | 2.892332e-52 | 2.120985e-49 |
| MsG0180003985.01 | MsG0480020957.01 | -0.805193 | 1.502050e-49 | 7.896754e-47 |
| MsG0180004124.01 | MsG0480020957.01 | -0.831025 | 2.109135e-55 | 2.260852e-52 |
| MsG0180004125.01 | MsG0480020957.01 | -0.827526 | 1.489878e-54 | 1.441974e-51 |
| MsG0180004322.01 | MsG0480020957.01 | -0.815652 | 8.282765e-52 | 5.744577e-49 |
| MsG0180004393.01 | MsG0480020957.01 | 0.816651 | 4.954415e-52 | 3.531253e-49 |
| MsG0180004502.01 | MsG0480020957.01 | -0.830062 | 3.628144e-55 | 3.781074e-52 |
| MsG0180004553.01 | MsG0480020957.01 | -0.826948 | 2.049939e-54 | 1.950931e-51 |
| MsG0180004581.01 | MsG0480020957.01 | -0.804082 | 2.562671e-49 | 1.309310e-46 |
| MsG0180004737.01 | MsG0480020957.01 | -0.808780 | 2.617391e-50 | 1.509930e-47 |
| MsG0180004942.01 | MsG0480020957.01 | 0.821914 | 3.133965e-53 | 2.584180e-50 |
| MsG0180004957.01 | MsG0480020957.01 | -0.830585 | 2.703188e-55 | 2.860120e-52 |
| MsG0180005356.01 | MsG0480020957.01 | 0.801702 | 7.949351e-49 | 3.821580e-46 |
| MsG0180005357.01 | MsG0480020957.01 | 0.812762 | 3.601826e-51 | 2.309660e-48 |
| MsG0180005369.01 | MsG0480020957.01 | -0.833718 | 4.539331e-56 | 5.271329e-53 |
| MsG0180005417.01 | MsG0480020957.01 | 0.805549 | 1.265494e-49 | 6.714002e-47 |
| MsG0180005514.01 | MsG0480020957.01 | 0.805100 | 1.571273e-49 | 8.240972e-47 |
| MsG0180005791.01 | MsG0480020957.01 | -0.803683 | 3.100800e-49 | 1.568037e-46 |
| MsG0180005817.01 | MsG0480020957.01 | -0.827742 | 1.322129e-54 | 1.287696e-51 |
| MsG0180005848.01 | MsG0480020957.01 | -0.823543 | 1.309002e-53 | 1.130402e-50 |
| MsG0180006110.01 | MsG0480020957.01 | 0.803681 | 3.104627e-49 | 1.569864e-46 |
| MsG0180006212.01 | MsG0480020957.01 | -0.863826 | 1.886146e-64 | 5.796049e-61 |
| MsG0180006227.01 | MsG0480020957.01 | -0.848567 | 5.645401e-60 | 1.040352e-56 |
| MsG0280006381.01 | MsG0480020957.01 | -0.839876 | 1.218845e-57 | 1.706022e-54 |
| MsG0280006442.01 | MsG0480020957.01 | 0.827271 | 1.715612e-54 | 1.648304e-51 |
| MsG0280006452.01 | MsG0480020957.01 | -0.811878 | 5.616439e-51 | 3.517243e-48 |
| MsG0280010780.01 | MsG0480020957.01 | -0.859790 | 3.241899e-63 | 8.666320e-60 |
| MsG0280010802.01 | MsG0480020957.01 | 0.809610 | 1.738193e-50 | 1.025293e-47 |
| MsG0280011165.01 | MsG0480020957.01 | 0.804767 | 1.844607e-49 | 9.592306e-47 |
| MsG0280011193.01 | MsG0480020957.01 | 0.802592 | 5.213679e-49 | 2.564019e-46 |
| MsG0280011236.01 | MsG0480020957.01 | 0.830419 | 2.969000e-55 | 3.126257e-52 |
| MsG0280011267.01 | MsG0480020957.01 | 0.818772 | 1.646635e-52 | 1.244001e-49 |
| MsG0280011299.01 | MsG0480020957.01 | -0.847911 | 8.567869e-60 | 1.546011e-56 |
| MsG0280011301.01 | MsG0480020957.01 | -0.858109 | 1.031960e-62 | 2.604833e-59 |
| MsG0280011475.01 | MsG0480020957.01 | -0.826214 | 3.067689e-54 | 2.858642e-51 |
| MsG0380011635.01 | MsG0480020957.01 | 0.833917 | 4.047991e-56 | 4.729899e-53 |
| MsG0380011638.01 | MsG0480020957.01 | 0.837024 | 6.631898e-57 | 8.506627e-54 |
| MsG0380011974.01 | MsG0480020957.01 | 0.844613 | 6.784895e-59 | 1.101391e-55 |
| MsG0380012008.01 | MsG0480020957.01 | 0.841021 | 6.115051e-58 | 8.868764e-55 |
| MsG0380012281.01 | MsG0480020957.01 | -0.856150 | 3.908157e-62 | 9.238629e-59 |
| MsG0380013114.01 | MsG0480020957.01 | -0.838421 | 2.905476e-57 | 3.889543e-54 |
| MsG0380013272.01 | MsG0480020957.01 | 0.853364 | 2.509211e-61 | 5.408228e-58 |
| MsG0380013278.01 | MsG0480020957.01 | 0.825367 | 4.872477e-54 | 4.432057e-51 |
| MsG0380013473.01 | MsG0480020957.01 | -0.839309 | 1.711746e-57 | 2.354507e-54 |
| MsG0380013506.01 | MsG0480020957.01 | -0.808713 | 2.705088e-50 | 1.557760e-47 |
| MsG0380013921.01 | MsG0480020957.01 | -0.835428 | 1.688110e-56 | 2.063663e-53 |
| MsG0380013928.01 | MsG0480020957.01 | -0.835588 | 1.537532e-56 | 1.888589e-53 |
| MsG0380013940.01 | MsG0480020957.01 | -0.824897 | 6.292597e-54 | 5.648321e-51 |
| MsG0380013943.01 | MsG0480020957.01 | -0.831396 | 1.709027e-55 | 1.852278e-52 |
| MsG0380013945.01 | MsG0480020957.01 | -0.839625 | 1.417060e-57 | 1.968147e-54 |
| MsG0380013953.01 | MsG0480020957.01 | -0.824902 | 6.274075e-54 | 5.632588e-51 |
| MsG0380013956.01 | MsG0480020957.01 | -0.846125 | 2.643503e-59 | 4.503793e-56 |
| MsG0380013957.01 | MsG0480020957.01 | -0.812004 | 5.272194e-51 | 3.313035e-48 |
| MsG0380013966.01 | MsG0480020957.01 | -0.816033 | 6.810766e-52 | 4.772988e-49 |
| MsG0380013967.01 | MsG0480020957.01 | -0.815769 | 7.800246e-52 | 5.427369e-49 |
| MsG0380013971.01 | MsG0480020957.01 | -0.837376 | 5.391997e-57 | 6.990046e-54 |
| MsG0380013975.01 | MsG0480020957.01 | -0.810612 | 1.057036e-50 | 6.401346e-48 |
| MsG0380013977.01 | MsG0480020957.01 | -0.822371 | 2.455870e-53 | 2.051790e-50 |
| MsG0380013986.01 | MsG0480020957.01 | -0.808661 | 2.774914e-50 | 1.595827e-47 |
| MsG0380013997.01 | MsG0480020957.01 | -0.805910 | 1.062680e-49 | 5.690774e-47 |
| MsG0380014005.01 | MsG0480020957.01 | -0.836338 | 9.924578e-57 | 1.247079e-53 |
| MsG0380014006.01 | MsG0480020957.01 | -0.810994 | 8.740484e-51 | 5.348022e-48 |
| MsG0380014016.01 | MsG0480020957.01 | -0.802919 | 4.463336e-49 | 2.213354e-46 |
| MsG0380014020.01 | MsG0480020957.01 | -0.828521 | 8.584703e-55 | 8.553694e-52 |
| MsG0380014023.01 | MsG0480020957.01 | -0.807123 | 5.895449e-50 | 3.256714e-47 |
| MsG0380014024.01 | MsG0480020957.01 | -0.809169 | 2.160714e-50 | 1.259580e-47 |
| MsG0380014029.01 | MsG0480020957.01 | -0.830863 | 2.310898e-55 | 2.465384e-52 |
| MsG0380014032.01 | MsG0480020957.01 | -0.847719 | 9.677714e-60 | 1.735637e-56 |
| MsG0380014033.01 | MsG0480020957.01 | -0.823930 | 1.062649e-53 | 9.278038e-51 |
| MsG0380014410.01 | MsG0480020957.01 | 0.843447 | 1.393749e-58 | 2.181286e-55 |
| MsG0380014639.01 | MsG0480020957.01 | -0.808702 | 2.719456e-50 | 1.565651e-47 |
| MsG0380014642.01 | MsG0480020957.01 | -0.824738 | 6.860575e-54 | 6.130133e-51 |
| MsG0380014735.01 | MsG0480020957.01 | -0.855581 | 5.731425e-62 | 1.329480e-58 |
| MsG0480018463.01 | MsG0480020957.01 | -0.800790 | 1.221375e-48 | 5.737921e-46 |
| MsG0480018563.01 | MsG0480020957.01 | 0.831145 | 1.970920e-55 | 2.120183e-52 |
| MsG0480018626.01 | MsG0480020957.01 | -0.805243 | 1.466789e-49 | 7.721191e-47 |
| MsG0480018628.01 | MsG0480020957.01 | -0.844098 | 9.327224e-59 | 1.489947e-55 |
| MsG0480019017.01 | MsG0480020957.01 | 0.870078 | 1.915215e-66 | 7.354029e-63 |
| MsG0480019028.01 | MsG0480020957.01 | -0.805053 | 1.607058e-49 | 8.418619e-47 |
| MsG0480019107.01 | MsG0480020957.01 | 0.807687 | 4.475287e-50 | 2.508822e-47 |
| MsG0480019183.01 | MsG0480020957.01 | -0.837654 | 4.576151e-57 | 5.984739e-54 |
| MsG0480019545.01 | MsG0480020957.01 | 0.805601 | 1.233533e-49 | 6.553325e-47 |
| MsG0480019726.01 | MsG0480020957.01 | 0.831429 | 1.677584e-55 | 1.819915e-52 |
| MsG0480019861.01 | MsG0480020957.01 | -0.825715 | 4.030567e-54 | 3.702880e-51 |
| MsG0480019890.01 | MsG0480020957.01 | 0.824037 | 1.002761e-53 | 8.780731e-51 |
| MsG0480019923.01 | MsG0480020957.01 | 0.837420 | 5.253254e-57 | 6.819921e-54 |
| MsG0480020722.01 | MsG0480020957.01 | 0.831836 | 1.331920e-55 | 1.462667e-52 |
| MsG0480020957.01 | MsG0480020958.01 | 0.887635 | 1.200133e-72 | 8.994910e-69 |
| MsG0480020957.01 | MsG0480020986.01 | 0.897164 | 1.833199e-76 | 2.045864e-72 |
| MsG0480020957.01 | MsG0480021001.01 | 0.882009 | 1.492160e-70 | 8.938334e-67 |
| MsG0480020957.01 | MsG0480021005.01 | 0.813563 | 2.402413e-51 | 1.574206e-48 |
| MsG0480020957.01 | MsG0480021205.01 | -0.810253 | 1.263436e-50 | 7.578934e-48 |
| MsG0480020957.01 | MsG0480021327.01 | -0.860896 | 1.499695e-63 | 4.164252e-60 |
| MsG0480020957.01 | MsG0480021331.01 | -0.855084 | 7.999765e-62 | 1.825152e-58 |
| MsG0480020957.01 | MsG0480021433.01 | 0.838391 | 2.957145e-57 | 3.955075e-54 |
| MsG0480020957.01 | MsG0480021553.01 | 0.836025 | 1.191620e-56 | 1.483029e-53 |
| MsG0480020957.01 | MsG0480021600.01 | 0.802520 | 5.395766e-49 | 2.648528e-46 |
| MsG0480020957.01 | MsG0480021912.01 | -0.850530 | 1.599679e-60 | 3.142772e-57 |
| MsG0480020957.01 | MsG0480022142.01 | 0.803997 | 2.669283e-49 | 1.360822e-46 |
| MsG0480020957.01 | MsG0480022428.01 | 0.849774 | 2.605505e-60 | 4.993640e-57 |
| MsG0480020957.01 | MsG0480022591.01 | -0.834565 | 2.785309e-56 | 3.318158e-53 |
| MsG0480020957.01 | MsG0480022721.01 | 0.826749 | 2.287064e-54 | 2.163920e-51 |
| MsG0480020957.01 | MsG0480022735.01 | 0.848470 | 6.003628e-60 | 1.103060e-56 |
| MsG0480020957.01 | MsG0480022765.01 | -0.835346 | 1.770727e-56 | 2.159560e-53 |
| MsG0480020957.01 | MsG0480022833.01 | 0.817420 | 3.327998e-52 | 2.422531e-49 |
| MsG0480020957.01 | MsG0480023067.01 | 0.835473 | 1.644005e-56 | 2.012410e-53 |
| MsG0480020957.01 | MsG0480023107.01 | 0.832639 | 8.428870e-56 | 9.477713e-53 |
| MsG0480020957.01 | MsG0480023152.01 | -0.876021 | 1.944746e-68 | 9.281356e-65 |
| MsG0480020957.01 | MsG0480023187.01 | -0.811293 | 7.526932e-51 | 4.641178e-48 |
| MsG0480020957.01 | MsG0480023242.01 | -0.805033 | 1.622780e-49 | 8.496340e-47 |
| MsG0480020957.01 | MsG0480023244.01 | -0.828391 | 9.230139e-55 | 9.162127e-52 |
| MsG0480020957.01 | MsG0480023322.01 | 0.839085 | 1.956248e-57 | 2.672388e-54 |
| MsG0480020957.01 | MsG0480023695.01 | -0.850003 | 2.247817e-60 | 4.340891e-57 |
| MsG0480020957.01 | MsG0580024218.01 | 0.811517 | 6.730679e-51 | 4.175126e-48 |
| MsG0480020957.01 | MsG0580024278.01 | -0.804926 | 1.708889e-49 | 8.923401e-47 |
| MsG0480020957.01 | MsG0580024309.01 | -0.848810 | 4.835615e-60 | 8.981924e-57 |
| MsG0480020957.01 | MsG0580024488.01 | 0.817797 | 2.737305e-52 | 2.013209e-49 |
| MsG0480020957.01 | MsG0580024493.01 | -0.847023 | 1.502615e-59 | 2.635362e-56 |
| MsG0480020957.01 | MsG0580024678.01 | -0.838232 | 3.248926e-57 | 4.323867e-54 |
| MsG0480020957.01 | MsG0580025023.01 | 0.801337 | 9.443444e-49 | 4.498364e-46 |
| MsG0480020957.01 | MsG0580025105.01 | -0.825247 | 5.200863e-54 | 4.714894e-51 |
| MsG0480020957.01 | MsG0580025117.01 | 0.834040 | 3.772023e-56 | 4.423165e-53 |
| MsG0480020957.01 | MsG0580025419.01 | 0.812983 | 3.221772e-51 | 2.078061e-48 |
| MsG0480020957.01 | MsG0580025420.01 | 0.840133 | 1.044687e-57 | 1.474175e-54 |
| MsG0480020957.01 | MsG0580025486.01 | -0.848074 | 7.725384e-60 | 1.400916e-56 |
| MsG0480020957.01 | MsG0580025507.01 | 0.831485 | 1.625543e-55 | 1.766503e-52 |
| MsG0480020957.01 | MsG0580025620.01 | 0.860027 | 2.749099e-63 | 7.409971e-60 |
| MsG0480020957.01 | MsG0580025746.01 | 0.811431 | 7.026232e-51 | 4.348557e-48 |
| MsG0480020957.01 | MsG0580025870.01 | 0.862138 | 6.263539e-64 | 1.815097e-60 |
| MsG0480020957.01 | MsG0580026073.01 | -0.802391 | 5.736026e-49 | 2.806553e-46 |
| MsG0480020957.01 | MsG0580026162.01 | 0.836660 | 8.215199e-57 | 1.042122e-53 |
| MsG0480020957.01 | MsG0580026362.01 | -0.822143 | 2.772732e-53 | 2.301354e-50 |
| MsG0480020957.01 | MsG0580026492.01 | 0.835353 | 1.763218e-56 | 2.150866e-53 |
| MsG0480020957.01 | MsG0580027036.01 | 0.807697 | 4.452854e-50 | 2.496897e-47 |
| MsG0480020957.01 | MsG0580027638.01 | 0.836378 | 9.692011e-57 | 1.219260e-53 |
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| MsG0280010047.01 | MsG0480020957.01 | 0.803145 | 4.008023e-49 | 1.998982e-46 |
| MsG0280010055.01 | MsG0480020957.01 | 0.803724 | 3.040930e-49 | 1.539395e-46 |
| MsG0280010142.01 | MsG0480020957.01 | -0.830491 | 2.849993e-55 | 3.007211e-52 |
| MsG0280010143.01 | MsG0480020957.01 | -0.809590 | 1.755164e-50 | 1.034735e-47 |
| MsG0280010296.01 | MsG0480020957.01 | 0.843900 | 1.053984e-58 | 1.673359e-55 |
| MsG0280010410.01 | MsG0480020957.01 | 0.813263 | 2.796571e-51 | 1.817522e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020957.01.T01 | MTR_4g063895 | 96.743 | 307 | 10 | 0 | 1 | 307 | 1 | 307 | 0.0 | 614 |
| MsG0480020957.01.T01 | MTR_4g063895 | 97.059 | 272 | 8 | 0 | 36 | 307 | 1 | 272 | 0.0 | 546 |
| MsG0480020957.01.T01 | MTR_1g075760 | 44.311 | 167 | 93 | 0 | 7 | 173 | 8 | 174 | 2.32e-47 | 161 |
| MsG0480020957.01.T01 | MTR_7g006280 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 3.81e-18 | 85.5 |
| MsG0480020957.01.T01 | MTR_1g016980 | 30.137 | 146 | 101 | 1 | 16 | 161 | 11 | 155 | 1.32e-17 | 83.6 |
| MsG0480020957.01.T01 | MTR_7g006100 | 32.000 | 125 | 74 | 1 | 37 | 161 | 613 | 726 | 2.21e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020957.01.T01 | AT3G46540 | 57.471 | 261 | 84 | 7 | 1 | 248 | 13 | 259 | 8.91e-83 | 252 |
| MsG0480020957.01.T01 | AT3G46540 | 57.471 | 261 | 84 | 7 | 1 | 248 | 1 | 247 | 1.24e-82 | 251 |
| MsG0480020957.01.T01 | AT3G46540 | 54.222 | 225 | 77 | 6 | 36 | 248 | 1 | 211 | 1.45e-62 | 199 |
| MsG0480020957.01.T01 | AT1G08670 | 45.714 | 175 | 93 | 2 | 1 | 173 | 5 | 179 | 4.14e-48 | 161 |
| MsG0480020957.01.T01 | AT3G23350 | 43.931 | 173 | 95 | 1 | 5 | 175 | 7 | 179 | 1.16e-46 | 159 |
| MsG0480020957.01.T01 | AT3G23350 | 43.931 | 173 | 95 | 1 | 5 | 175 | 6 | 178 | 1.27e-46 | 159 |
| MsG0480020957.01.T01 | AT1G08670 | 41.803 | 122 | 70 | 1 | 53 | 173 | 1 | 122 | 1.78e-28 | 108 |
| MsG0480020957.01.T01 | AT2G43160 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 3.09e-18 | 85.5 |
| MsG0480020957.01.T01 | AT2G43160 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 3.62e-18 | 85.5 |
| MsG0480020957.01.T01 | AT2G43160 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 3.62e-18 | 85.5 |
| MsG0480020957.01.T01 | AT2G43160 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 3.62e-18 | 85.5 |
| MsG0480020957.01.T01 | AT2G43160 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 3.62e-18 | 85.5 |
| MsG0480020957.01.T01 | AT5G11710 | 28.082 | 146 | 104 | 1 | 16 | 161 | 11 | 155 | 3.10e-16 | 79.3 |
| MsG0480020957.01.T01 | AT5G11710 | 28.082 | 146 | 104 | 1 | 16 | 161 | 11 | 155 | 3.10e-16 | 79.3 |
| MsG0480020957.01.T01 | AT5G11710 | 28.082 | 146 | 104 | 1 | 16 | 161 | 11 | 155 | 3.10e-16 | 79.3 |
| MsG0480020957.01.T01 | AT3G59290 | 35.433 | 127 | 81 | 1 | 34 | 160 | 27 | 152 | 9.62e-16 | 78.2 |
Find 66 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCCTCTGCTACACTTTC+TGG | 0.104086 | 4:+51178257 | None:intergenic |
| CATTTCTGTTGTTGAGTTAA+AGG | 0.216373 | 4:+51177430 | None:intergenic |
| TGAAAATTTGCAGGTTCAAT+TGG | 0.282899 | 4:-51177901 | MsG0480020957.01.T01:intron |
| TCAAGAGGTATTCAAGGTTT+TGG | 0.289457 | 4:-51177785 | MsG0480020957.01.T01:CDS |
| ATCAAGTTCTAAAGAAAATA+TGG | 0.298192 | 4:-51177561 | MsG0480020957.01.T01:CDS |
| TGGAGAGTCAGAATCACTTT+TGG | 0.312508 | 4:-51177510 | MsG0480020957.01.T01:CDS |
| CTAAATTTGAAAAGAAGAAT+TGG | 0.317894 | 4:-51178331 | MsG0480020957.01.T01:CDS |
| ACCCGTTCTGATCAATATAT+TGG | 0.319311 | 4:+51178195 | None:intergenic |
| TTATAGAGATTCTACATAAA+AGG | 0.331852 | 4:-51178618 | MsG0480020957.01.T01:intron |
| GAAAATTTGCAGGTTCAATT+GGG | 0.334870 | 4:-51177900 | MsG0480020957.01.T01:intron |
| GTGAAGAAGAGGATTCTTCT+AGG | 0.348170 | 4:-51177484 | MsG0480020957.01.T01:CDS |
| ATTTCTGTTGTTGAGTTAAA+GGG | 0.348433 | 4:+51177431 | None:intergenic |
| ATCATCATCTTTGTATATCA+TGG | 0.354388 | 4:+51177616 | None:intergenic |
| AAGAAAATATGGAACCTAGT+AGG | 0.369176 | 4:-51177550 | MsG0480020957.01.T01:CDS |
| AAATCATTGCCAACCACATT+TGG | 0.381019 | 4:-51177716 | MsG0480020957.01.T01:CDS |
| AAGTTCCACACTTCCCTACT+AGG | 0.387979 | 4:+51177536 | None:intergenic |
| TGAACTATGAAAATAGATAT+TGG | 0.393855 | 4:-51177225 | MsG0480020957.01.T01:three_prime_UTR |
| GAAGAGGATTCTTCTAGGTT+TGG | 0.410457 | 4:-51177479 | MsG0480020957.01.T01:CDS |
| CTGATTTCTTTCTCACAGTT+AGG | 0.411740 | 4:+51177876 | None:intergenic |
| CTTGAGCATTTGTTGACTCA+TGG | 0.422333 | 4:-51178281 | MsG0480020957.01.T01:CDS |
| TCCAATATATTGATCAGAAC+GGG | 0.423953 | 4:-51178196 | MsG0480020957.01.T01:intron |
| AAGAAAGAAACCAATGTAGA+AGG | 0.430906 | 4:-51177811 | MsG0480020957.01.T01:CDS |
| CAATGATTTCTCGCGAAGAA+TGG | 0.431381 | 4:+51177730 | None:intergenic |
| ATGATAGAAGAGGCAACTAA+TGG | 0.435665 | 4:-51178718 | MsG0480020957.01.T01:CDS |
| TCCTTGCTTTCTGCTAGAGA+TGG | 0.439226 | 4:-51177395 | MsG0480020957.01.T01:CDS |
| AATCCATCTTTCTCAACCTT+CGG | 0.447702 | 4:-51177650 | MsG0480020957.01.T01:CDS |
| AGGTTATCAAGAGGTATTCA+AGG | 0.457152 | 4:-51177791 | MsG0480020957.01.T01:CDS |
| AGAAAATATGGAACCTAGTA+GGG | 0.473708 | 4:-51177549 | MsG0480020957.01.T01:CDS |
| GATCTGAGGGTTACAGTAGT+TGG | 0.473866 | 4:+51178682 | None:intergenic |
| CACAATCAAGGAATTGTAAG+AGG | 0.479866 | 4:+51178304 | None:intergenic |
| TCGCGAAGAATGGCTTGTGT+TGG | 0.484587 | 4:+51177740 | None:intergenic |
| CTCAAACAACTACGAAGATC+AGG | 0.492009 | 4:-51177678 | MsG0480020957.01.T01:CDS |
| CTCTTGATAACCTTCTACAT+TGG | 0.492948 | 4:+51177801 | None:intergenic |
| CTACCGAAGGTTGAGAAAGA+TGG | 0.495400 | 4:+51177647 | None:intergenic |
| AGGATTCTTCTAGGTTTGGT+AGG | 0.500264 | 4:-51177475 | MsG0480020957.01.T01:CDS |
| GTTACAGTAGTTGGTGCCCA+TGG | 0.502809 | 4:+51178691 | None:intergenic |
| AGGGAAGTGTGGAACTTGGA+TGG | 0.503033 | 4:-51177530 | MsG0480020957.01.T01:CDS |
| TAACAAGCTCACAGTTCTGC+AGG | 0.506386 | 4:+51178875 | None:intergenic |
| CAAATGCTCAAGCACAATCA+AGG | 0.506589 | 4:+51178292 | None:intergenic |
| TATATTGGAAACCTTTCAGC+TGG | 0.516997 | 4:+51178210 | None:intergenic |
| AGAAAGAGTAATGAAACTGT+TGG | 0.517831 | 4:-51177855 | MsG0480020957.01.T01:CDS |
| AGCCTTTGAAATTGATCTGA+GGG | 0.520257 | 4:+51178669 | None:intergenic |
| GTAATGAAACTGTTGGAAGA+AGG | 0.523779 | 4:-51177848 | MsG0480020957.01.T01:CDS |
| ATCTTCGTAGTTGTTTGAGT+CGG | 0.532031 | 4:+51177682 | None:intergenic |
| AGGCAACTAATGGAAATCCA+TGG | 0.532106 | 4:-51178708 | MsG0480020957.01.T01:CDS |
| TAGTAGGGAAGTGTGGAACT+TGG | 0.538983 | 4:-51177534 | MsG0480020957.01.T01:CDS |
| ATATACAAAGATGATGATAG+TGG | 0.542784 | 4:-51177611 | MsG0480020957.01.T01:CDS |
| CAGCCTTTGAAATTGATCTG+AGG | 0.552074 | 4:+51178668 | None:intergenic |
| TTCCAATATATTGATCAGAA+CGG | 0.554896 | 4:-51178197 | MsG0480020957.01.T01:CDS |
| GATGTTATTGACCAGCTGAA+AGG | 0.568995 | 4:-51178221 | MsG0480020957.01.T01:CDS |
| TCCATCTCTAGCAGAAAGCA+AGG | 0.572809 | 4:+51177394 | None:intergenic |
| AATTTGAAAAGAAGAATTGG+AGG | 0.586374 | 4:-51178328 | MsG0480020957.01.T01:CDS |
| AAAATTTGCAGGTTCAATTG+GGG | 0.587617 | 4:-51177899 | MsG0480020957.01.T01:intron |
| TTGAGCTAGATGATTATAGG+AGG | 0.590229 | 4:-51178642 | MsG0480020957.01.T01:CDS |
| GGCAACTAATGGAAATCCAT+GGG | 0.593719 | 4:-51178707 | MsG0480020957.01.T01:CDS |
| TTTCTGTTGTTGAGTTAAAG+GGG | 0.598418 | 4:+51177432 | None:intergenic |
| GCTAGAGATGGAATACTACA+AGG | 0.602070 | 4:-51177383 | MsG0480020957.01.T01:CDS |
| AACCCTCAGATCAATTTCAA+AGG | 0.602620 | 4:-51178671 | MsG0480020957.01.T01:CDS |
| ATTTGAAAAGAAGAATTGGA+GGG | 0.607233 | 4:-51178327 | MsG0480020957.01.T01:CDS |
| GGAATTACATCTACCAAATG+TGG | 0.607897 | 4:+51177703 | None:intergenic |
| GGAAGAAGGAAATCTTCTCA+AGG | 0.607937 | 4:-51177834 | MsG0480020957.01.T01:CDS |
| TTACATCTACCAAATGTGGT+TGG | 0.611221 | 4:+51177707 | None:intergenic |
| TGGAACCTAGTAGGGAAGTG+TGG | 0.613565 | 4:-51177541 | MsG0480020957.01.T01:CDS |
| TGGACCAGAAAGTGTAGCAG+AGG | 0.637626 | 4:-51178261 | MsG0480020957.01.T01:CDS |
| CAATGTAGAAGGTTATCAAG+AGG | 0.650694 | 4:-51177800 | MsG0480020957.01.T01:CDS |
| TCTTTGAAGAATGATAGAAG+AGG | 0.674445 | 4:-51178728 | MsG0480020957.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTGAGTAAAAAAAGA+AGG | + | Chr4:51178075-51178094 | None:intergenic | 15.0% |
| !!! | ATTCAATGATCAAATTTTTT+AGG | + | Chr4:51178286-51178305 | None:intergenic | 15.0% |
| !!! | TTTATCTATCATTATGTTTT+TGG | - | Chr4:51178949-51178968 | MsG0480020957.01.T01:CDS | 15.0% |
| !!! | TTTTAGGTAAACAATTTTTT+TGG | + | Chr4:51178270-51178289 | None:intergenic | 15.0% |
| !! | AAGATATTATGAAAATTTGC+AGG | - | Chr4:51178325-51178344 | MsG0480020957.01.T01:CDS | 20.0% |
| !! | ATGCTAAGTAAAAAAAATGA+GGG | + | Chr4:51177655-51177674 | None:intergenic | 20.0% |
| !! | CTAAATTTGAAAAGAAGAAT+TGG | - | Chr4:51177904-51177923 | MsG0480020957.01.T01:intron | 20.0% |
| !! | TAATATCTTTAAGTATCAAC+CGG | + | Chr4:51178314-51178333 | None:intergenic | 20.0% |
| !! | TGAACTATGAAAATAGATAT+TGG | - | Chr4:51179010-51179029 | MsG0480020957.01.T01:five_prime_UTR | 20.0% |
| !! | TTATAGAGATTCTACATAAA+AGG | - | Chr4:51177617-51177636 | MsG0480020957.01.T01:CDS | 20.0% |
| !!! | ATCAAGTTCTAAAGAAAATA+TGG | - | Chr4:51178674-51178693 | MsG0480020957.01.T01:CDS | 20.0% |
| !!! | GATACAATTCTAAAATAGAT+TGG | - | Chr4:51177881-51177900 | MsG0480020957.01.T01:CDS | 20.0% |
| !!! | GTTTTTTGAATTCATAGAAA+GGG | + | Chr4:51177278-51177297 | None:intergenic | 20.0% |
| !!! | TGTTTTTTGAATTCATAGAA+AGG | + | Chr4:51177279-51177298 | None:intergenic | 20.0% |
| !!! | TTTTTTGAATTCATAGAAAG+GGG | + | Chr4:51177277-51177296 | None:intergenic | 20.0% |
| ! | AAAAAAACTGTGACAATTGA+AGG | + | Chr4:51178984-51179003 | None:intergenic | 25.0% |
| ! | AAAAAACTGTGACAATTGAA+GGG | + | Chr4:51178983-51179002 | None:intergenic | 25.0% |
| ! | AATTTGAAAAGAAGAATTGG+AGG | - | Chr4:51177907-51177926 | MsG0480020957.01.T01:intron | 25.0% |
| ! | ATATACAAAGATGATGATAG+TGG | - | Chr4:51178624-51178643 | MsG0480020957.01.T01:CDS | 25.0% |
| ! | ATCATCATCTTTGTATATCA+TGG | + | Chr4:51178622-51178641 | None:intergenic | 25.0% |
| ! | ATTTCTGTTGTTGAGTTAAA+GGG | + | Chr4:51178807-51178826 | None:intergenic | 25.0% |
| ! | ATTTGAAAAGAAGAATTGGA+GGG | - | Chr4:51177908-51177927 | MsG0480020957.01.T01:intron | 25.0% |
| ! | CATGCTAAGTAAAAAAAATG+AGG | + | Chr4:51177656-51177675 | None:intergenic | 25.0% |
| ! | TGCTAAGTAAAAAAAATGAG+GGG | + | Chr4:51177654-51177673 | None:intergenic | 25.0% |
| ! | TGTTACTAAATGAATCATGA+TGG | - | Chr4:51177848-51177867 | MsG0480020957.01.T01:CDS | 25.0% |
| ! | TTCCAATATATTGATCAGAA+CGG | - | Chr4:51178038-51178057 | MsG0480020957.01.T01:intron | 25.0% |
| ! | TTTGATCATTGAATTTCTTC+CGG | - | Chr4:51178292-51178311 | MsG0480020957.01.T01:CDS | 25.0% |
| !! | TATCGAAAACAATTTTGTCA+TGG | - | Chr4:51177778-51177797 | MsG0480020957.01.T01:CDS | 25.0% |
| !!! | ATTTCCAAGGTTTTAAATTG+CGG | - | Chr4:51177682-51177701 | MsG0480020957.01.T01:CDS | 25.0% |
| AAAATTTGCAGGTTCAATTG+GGG | - | Chr4:51178336-51178355 | MsG0480020957.01.T01:CDS | 30.0% | |
| AAGAAAATATGGAACCTAGT+AGG | - | Chr4:51178685-51178704 | MsG0480020957.01.T01:CDS | 30.0% | |
| AAGAAAGAAACCAATGTAGA+AGG | - | Chr4:51178424-51178443 | MsG0480020957.01.T01:intron | 30.0% | |
| AGAAAATATGGAACCTAGTA+GGG | - | Chr4:51178686-51178705 | MsG0480020957.01.T01:CDS | 30.0% | |
| AGAAAGAGTAATGAAACTGT+TGG | - | Chr4:51178380-51178399 | MsG0480020957.01.T01:intron | 30.0% | |
| ATATCCAAAACTATAGCTCT+AGG | - | Chr4:51177456-51177475 | MsG0480020957.01.T01:CDS | 30.0% | |
| CATTTCTGTTGTTGAGTTAA+AGG | + | Chr4:51178808-51178827 | None:intergenic | 30.0% | |
| GAAAATTTGCAGGTTCAATT+GGG | - | Chr4:51178335-51178354 | MsG0480020957.01.T01:CDS | 30.0% | |
| GCAATCAAATTCGATATATG+TGG | - | Chr4:51177742-51177761 | MsG0480020957.01.T01:CDS | 30.0% | |
| GCTAAGTAAAAAAAATGAGG+GGG | + | Chr4:51177653-51177672 | None:intergenic | 30.0% | |
| TAGTAACAAAGAAGTGATCA+CGG | + | Chr4:51177836-51177855 | None:intergenic | 30.0% | |
| TCCAATATATTGATCAGAAC+GGG | - | Chr4:51178039-51178058 | MsG0480020957.01.T01:intron | 30.0% | |
| TGAAAATTTGCAGGTTCAAT+TGG | - | Chr4:51178334-51178353 | MsG0480020957.01.T01:CDS | 30.0% | |
| TTTCTGTTGTTGAGTTAAAG+GGG | + | Chr4:51178806-51178825 | None:intergenic | 30.0% | |
| ! | AAATCCTAGAGCTATAGTTT+TGG | + | Chr4:51177463-51177482 | None:intergenic | 30.0% |
| ! | CTTTTGAGCTAGATGATTAT+AGG | - | Chr4:51177590-51177609 | MsG0480020957.01.T01:CDS | 30.0% |
| ! | GCAATTTAAAACCTTGGAAA+TGG | + | Chr4:51177683-51177702 | None:intergenic | 30.0% |
| ! | TCTTTGAAGAATGATAGAAG+AGG | - | Chr4:51177507-51177526 | MsG0480020957.01.T01:CDS | 30.0% |
| AAATCATTGCCAACCACATT+TGG | - | Chr4:51178519-51178538 | MsG0480020957.01.T01:intron | 35.0% | |
| AACCCTCAGATCAATTTCAA+AGG | - | Chr4:51177564-51177583 | MsG0480020957.01.T01:CDS | 35.0% | |
| AATCCATCTTTCTCAACCTT+CGG | - | Chr4:51178585-51178604 | MsG0480020957.01.T01:intron | 35.0% | |
| ACCCGTTCTGATCAATATAT+TGG | + | Chr4:51178043-51178062 | None:intergenic | 35.0% | |
| ATCTTCGTAGTTGTTTGAGT+CGG | + | Chr4:51178556-51178575 | None:intergenic | 35.0% | |
| ATGATAGAAGAGGCAACTAA+TGG | - | Chr4:51177517-51177536 | MsG0480020957.01.T01:CDS | 35.0% | |
| CAATGTAGAAGGTTATCAAG+AGG | - | Chr4:51178435-51178454 | MsG0480020957.01.T01:intron | 35.0% | |
| CACAATCAAGGAATTGTAAG+AGG | + | Chr4:51177934-51177953 | None:intergenic | 35.0% | |
| CTGATTTCTTTCTCACAGTT+AGG | + | Chr4:51178362-51178381 | None:intergenic | 35.0% | |
| GGAATTACATCTACCAAATG+TGG | + | Chr4:51178535-51178554 | None:intergenic | 35.0% | |
| GTAATGAAACTGTTGGAAGA+AGG | - | Chr4:51178387-51178406 | MsG0480020957.01.T01:intron | 35.0% | |
| GTATGTTTATTTCCTTCCTC+AGG | + | Chr4:51177214-51177233 | None:intergenic | 35.0% | |
| TATATTGGAAACCTTTCAGC+TGG | + | Chr4:51178028-51178047 | None:intergenic | 35.0% | |
| TCTCGTCATGATTCAAACTA+GGG | + | Chr4:51178164-51178183 | None:intergenic | 35.0% | |
| TTACATCTACCAAATGTGGT+TGG | + | Chr4:51178531-51178550 | None:intergenic | 35.0% | |
| TTCTCGTCATGATTCAAACT+AGG | + | Chr4:51178165-51178184 | None:intergenic | 35.0% | |
| TTGAGCTAGATGATTATAGG+AGG | - | Chr4:51177593-51177612 | MsG0480020957.01.T01:CDS | 35.0% | |
| ! | ACTTTTGGATTGTGAAGAAG+AGG | - | Chr4:51178740-51178759 | MsG0480020957.01.T01:intron | 35.0% |
| ! | CAGTCTTGATTTTCTCTTTG+AGG | + | Chr4:51177314-51177333 | None:intergenic | 35.0% |
| ! | CCTCTTTTACTAGGAGAAAA+GGG | + | Chr4:51178240-51178259 | None:intergenic | 35.0% |
| ! | CCTTTTCTCCTAGTAAAAGA+GGG | - | Chr4:51178238-51178257 | MsG0480020957.01.T01:CDS | 35.0% |
| ! | CTCTTGATAACCTTCTACAT+TGG | + | Chr4:51178437-51178456 | None:intergenic | 35.0% |
| !! | AGCCTTTGAAATTGATCTGA+GGG | + | Chr4:51177569-51177588 | None:intergenic | 35.0% |
| !! | AGGTTATCAAGAGGTATTCA+AGG | - | Chr4:51178444-51178463 | MsG0480020957.01.T01:intron | 35.0% |
| !! | GGTTTTAACCCTCTTTTACT+AGG | + | Chr4:51178249-51178268 | None:intergenic | 35.0% |
| !!! | GTGATCACGGTTTTAAATGA+AGG | + | Chr4:51177823-51177842 | None:intergenic | 35.0% |
| !!! | TCAAGAGGTATTCAAGGTTT+TGG | - | Chr4:51178450-51178469 | MsG0480020957.01.T01:intron | 35.0% |
| AATTCCTCTGCTACACTTTC+TGG | + | Chr4:51177981-51178000 | None:intergenic | 40.0% | |
| AGGCAACTAATGGAAATCCA+TGG | - | Chr4:51177527-51177546 | MsG0480020957.01.T01:CDS | 40.0% | |
| CAAATGCTCAAGCACAATCA+AGG | + | Chr4:51177946-51177965 | None:intergenic | 40.0% | |
| CAATGATTTCTCGCGAAGAA+TGG | + | Chr4:51178508-51178527 | None:intergenic | 40.0% | |
| CTCAAACAACTACGAAGATC+AGG | - | Chr4:51178557-51178576 | MsG0480020957.01.T01:intron | 40.0% | |
| GAAGAGGATTCTTCTAGGTT+TGG | - | Chr4:51178756-51178775 | MsG0480020957.01.T01:intron | 40.0% | |
| GATGTTATTGACCAGCTGAA+AGG | - | Chr4:51178014-51178033 | MsG0480020957.01.T01:intron | 40.0% | |
| GCTAGAGATGGAATACTACA+AGG | - | Chr4:51178852-51178871 | MsG0480020957.01.T01:intron | 40.0% | |
| GGAAGAAGGAAATCTTCTCA+AGG | - | Chr4:51178401-51178420 | MsG0480020957.01.T01:intron | 40.0% | |
| GGCAACTAATGGAAATCCAT+GGG | - | Chr4:51177528-51177547 | MsG0480020957.01.T01:CDS | 40.0% | |
| GTGAAGAAGAGGATTCTTCT+AGG | - | Chr4:51178751-51178770 | MsG0480020957.01.T01:intron | 40.0% | |
| TAGCATGTTCACCATTTCCA+AGG | - | Chr4:51177669-51177688 | MsG0480020957.01.T01:CDS | 40.0% | |
| ! | AGGATTCTTCTAGGTTTGGT+AGG | - | Chr4:51178760-51178779 | MsG0480020957.01.T01:intron | 40.0% |
| ! | CCCTCTTTTACTAGGAGAAA+AGG | + | Chr4:51178241-51178260 | None:intergenic | 40.0% |
| ! | CCCTTTTCTCCTAGTAAAAG+AGG | - | Chr4:51178237-51178256 | MsG0480020957.01.T01:CDS | 40.0% |
| ! | TGGAGAGTCAGAATCACTTT+TGG | - | Chr4:51178725-51178744 | MsG0480020957.01.T01:intron | 40.0% |
| !! | CAGCCTTTGAAATTGATCTG+AGG | + | Chr4:51177570-51177589 | None:intergenic | 40.0% |
| !! | CTTGAGCATTTGTTGACTCA+TGG | - | Chr4:51177954-51177973 | MsG0480020957.01.T01:intron | 40.0% |
| AAGTTCCACACTTCCCTACT+AGG | + | Chr4:51178702-51178721 | None:intergenic | 45.0% | |
| CTACCGAAGGTTGAGAAAGA+TGG | + | Chr4:51178591-51178610 | None:intergenic | 45.0% | |
| GAGAAAAGGGCCTGATAATC+TGG | + | Chr4:51178227-51178246 | None:intergenic | 45.0% | |
| GATCTGAGGGTTACAGTAGT+TGG | + | Chr4:51177556-51177575 | None:intergenic | 45.0% | |
| TAACAAGCTCACAGTTCTGC+AGG | + | Chr4:51177363-51177382 | None:intergenic | 45.0% | |
| TCCATCTCTAGCAGAAAGCA+AGG | + | Chr4:51178844-51178863 | None:intergenic | 45.0% | |
| TCCTTGCTTTCTGCTAGAGA+TGG | - | Chr4:51178840-51178859 | MsG0480020957.01.T01:intron | 45.0% | |
| ! | GCGACCGCAATTTAAAACCT+TGG | + | Chr4:51177689-51177708 | None:intergenic | 45.0% |
| ! | TAGTAGGGAAGTGTGGAACT+TGG | - | Chr4:51178701-51178720 | MsG0480020957.01.T01:CDS | 45.0% |
| !!! | AGGGGTGCTCATTTTGCTAT+TGG | + | Chr4:51177259-51177278 | None:intergenic | 45.0% |
| CGACCAAGCTCCAGATTATC+AGG | - | Chr4:51178214-51178233 | MsG0480020957.01.T01:CDS | 50.0% | |
| TGGAACCTAGTAGGGAAGTG+TGG | - | Chr4:51178694-51178713 | MsG0480020957.01.T01:CDS | 50.0% | |
| ! | AGGGAAGTGTGGAACTTGGA+TGG | - | Chr4:51178705-51178724 | MsG0480020957.01.T01:CDS | 50.0% |
| ! | CATGGTTTTCGTGCTACCGA+AGG | + | Chr4:51178604-51178623 | None:intergenic | 50.0% |
| ! | GTTACAGTAGTTGGTGCCCA+TGG | + | Chr4:51177547-51177566 | None:intergenic | 50.0% |
| ! | TCGCGAAGAATGGCTTGTGT+TGG | + | Chr4:51178498-51178517 | None:intergenic | 50.0% |
| ! | TGGACCAGAAAGTGTAGCAG+AGG | - | Chr4:51177974-51177993 | MsG0480020957.01.T01:intron | 50.0% |
| AAGGTCTGCGAGCGCAATCT+AGG | + | Chr4:51177804-51177823 | None:intergenic | 55.0% | |
| ! | GGGCCTGATAATCTGGAGCT+TGG | + | Chr4:51178220-51178239 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 51177214 | 51179043 | 51177214 | ID=MsG0480020957.01;Name=MsG0480020957.01 |
| Chr4 | mRNA | 51177214 | 51179043 | 51177214 | ID=MsG0480020957.01.T01;Parent=MsG0480020957.01;Name=MsG0480020957.01.T01;_AED=0.23;_eAED=0.23;_QI=53|1|1|1|1|1|4|162|307 |
| Chr4 | exon | 51177214 | 51177910 | 51177214 | ID=MsG0480020957.01.T01:exon:1083;Parent=MsG0480020957.01.T01 |
| Chr4 | exon | 51178197 | 51178358 | 51178197 | ID=MsG0480020957.01.T01:exon:1082;Parent=MsG0480020957.01.T01 |
| Chr4 | exon | 51178619 | 51178741 | 51178619 | ID=MsG0480020957.01.T01:exon:1081;Parent=MsG0480020957.01.T01 |
| Chr4 | exon | 51178887 | 51179043 | 51178887 | ID=MsG0480020957.01.T01:exon:1080;Parent=MsG0480020957.01.T01 |
| Chr4 | five_prime_UTR | 51178991 | 51179043 | 51178991 | ID=MsG0480020957.01.T01:five_prime_utr;Parent=MsG0480020957.01.T01 |
| Chr4 | CDS | 51178887 | 51178990 | 51178887 | ID=MsG0480020957.01.T01:cds;Parent=MsG0480020957.01.T01 |
| Chr4 | CDS | 51178619 | 51178741 | 51178619 | ID=MsG0480020957.01.T01:cds;Parent=MsG0480020957.01.T01 |
| Chr4 | CDS | 51178197 | 51178358 | 51178197 | ID=MsG0480020957.01.T01:cds;Parent=MsG0480020957.01.T01 |
| Chr4 | CDS | 51177376 | 51177910 | 51177376 | ID=MsG0480020957.01.T01:cds;Parent=MsG0480020957.01.T01 |
| Chr4 | three_prime_UTR | 51177214 | 51177375 | 51177214 | ID=MsG0480020957.01.T01:three_prime_utr;Parent=MsG0480020957.01.T01 |
| Gene Sequence |
| Protein sequence |
