AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028982.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028982.01.T01 MTR_5g079460 97.409 386 9 1 1 385 1 386 0.0 767
MsG0580028982.01.T01 MTR_1g101950 74.540 326 80 2 54 378 13 336 5.36e-180 503
MsG0580028982.01.T01 MTR_6g089480 75.563 311 75 1 73 382 1 311 3.39e-177 495
MsG0580028982.01.T01 MTR_2g098950 68.421 323 100 2 56 378 5 325 1.89e-162 459
MsG0580028982.01.T01 MTR_1g076850 66.667 312 103 1 63 374 5 315 9.37e-157 444
MsG0580028982.01.T01 MTR_4g067310 66.771 319 105 1 64 382 13 330 1.31e-155 441
MsG0580028982.01.T01 MTR_6g089480 76.103 272 64 1 73 343 1 272 3.27e-155 438
MsG0580028982.01.T01 MTR_6g089480 76.667 270 62 1 73 341 1 270 7.00e-155 437
MsG0580028982.01.T01 MTR_7g075860 63.043 322 116 2 63 381 38 359 1.24e-147 422
MsG0580028982.01.T01 MTR_1g069490 57.680 319 108 3 61 378 105 397 4.21e-121 357
MsG0580028982.01.T01 MTR_1g069745 58.644 295 109 3 84 377 1 283 3.96e-118 345
MsG0580028982.01.T01 MTR_1g057810 56.481 324 130 4 61 381 248 563 2.48e-116 350
MsG0580028982.01.T01 MTR_1g105150 53.086 324 127 5 61 381 248 549 1.16e-103 317
MsG0580028982.01.T01 MTR_1g054730 49.091 275 110 2 108 382 146 390 7.88e-78 245
MsG0580028982.01.T01 MTR_4g019165 33.056 360 195 4 65 378 92 451 6.62e-55 187
MsG0580028982.01.T01 MTR_5g044990 30.548 347 199 7 65 374 209 550 3.61e-47 169
MsG0580028982.01.T01 MTR_0046s0180 60.204 98 39 0 280 377 10 107 9.72e-38 132
MsG0580028982.01.T01 MTR_2g072830 27.931 290 182 7 97 380 89 357 1.57e-15 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028982.01.T01 AT1G66430 78.553 387 76 4 1 384 1 383 0.0 598
MsG0580028982.01.T01 AT5G51830 72.561 328 88 2 55 380 11 338 4.17e-175 491
MsG0580028982.01.T01 AT5G51830 72.561 328 88 2 55 380 11 338 4.17e-175 491
MsG0580028982.01.T01 AT3G59480 67.188 320 103 2 63 382 7 324 7.66e-158 447
MsG0580028982.01.T01 AT1G06030 66.984 315 103 1 66 380 11 324 6.91e-156 442
MsG0580028982.01.T01 AT1G06020 65.312 320 110 1 61 380 5 323 6.94e-154 437
MsG0580028982.01.T01 AT4G10260 67.638 309 99 1 64 372 4 311 9.13e-154 436
MsG0580028982.01.T01 AT2G31390 65.931 317 107 1 66 382 9 324 1.62e-153 436
MsG0580028982.01.T01 AT3G54090 33.056 360 194 6 65 378 102 460 1.67e-55 189
MsG0580028982.01.T01 AT1G50390 50.575 174 56 1 211 384 1 144 6.73e-51 167
MsG0580028982.01.T01 AT1G69200 30.395 329 194 6 65 359 205 532 3.14e-44 162
MsG0580028982.01.T01 AT1G17160 27.027 296 179 9 97 380 105 375 9.45e-15 75.5

Find 118 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACCTGAGGCTTCCTTTA+TGG 0.168693 5:+89900944 MsG0580028982.01.T01:CDS
AGAACAGTGTTGAATGTTAA+TGG 0.178871 5:-89896334 None:intergenic
GAGAAGGAATTCTGAGTATA+TGG 0.229087 5:+89900986 MsG0580028982.01.T01:CDS
ACAAAGGCAATACCTGAAAA+TGG 0.237120 5:+89898482 MsG0580028982.01.T01:CDS
CCAAGTCTAGTTCATCTTCT+TGG 0.239311 5:-89900676 None:intergenic
AACTGTTAGTGGCCTTTCTT+TGG 0.246570 5:+89898571 MsG0580028982.01.T01:CDS
TACGGATCTTTCATTACTTC+AGG 0.289822 5:+89901857 MsG0580028982.01.T01:CDS
TTAAAATTCAACCGAACATT+AGG 0.296573 5:-89896517 None:intergenic
CAGGCCAAGATCTTTCATTA+TGG 0.304009 5:+89900829 MsG0580028982.01.T01:intron
AGAGGCGATTCCTTTGTTTC+AGG 0.315237 5:-89898509 None:intergenic
TGATGCACCGGCATTTAAAA+AGG 0.319751 5:+89898595 MsG0580028982.01.T01:CDS
TCGCCTCTGGTGGTTTGTTT+CGG 0.326535 5:+89898524 MsG0580028982.01.T01:CDS
CGAACAACAGCATCATTGTA+TGG 0.334727 5:-89901221 None:intergenic
TCAGTTCATGTGGTTGCATA+TGG 0.350956 5:+89902958 MsG0580028982.01.T01:three_prime_UTR
AGAACCCAGTGTTCTAATAA+TGG 0.359958 5:+89902875 MsG0580028982.01.T01:three_prime_UTR
GTCATTCTTTATCCAACATC+AGG 0.368894 5:+89902901 MsG0580028982.01.T01:three_prime_UTR
GATTTGTTGGATTACAGTTT+CGG 0.372701 5:-89896282 None:intergenic
ACAAGGAGTAGTTTGAGGTT+TGG 0.379921 5:-89901257 None:intergenic
TGAATTGAGTTATGATTTGT+TGG 0.393998 5:-89896295 None:intergenic
AAGCCGATGAACCTCCTAAT+CGG 0.394552 5:-89898658 None:intergenic
CTCGTTCTCCATCACTCCTT+AGG 0.400314 5:-89900613 None:intergenic
CGAATGTGAAATTATGATAC+AGG 0.401017 5:-89902800 None:intergenic
GAGGCGATTCCTTTGTTTCA+GGG 0.403590 5:-89898508 None:intergenic
CATAAAGGAAGCCTCAGGTT+AGG 0.408170 5:-89900943 None:intergenic
CTCATTCTCCTCCTAATGTT+CGG 0.412156 5:+89896506 MsG0580028982.01.T01:CDS
GTTTCCTTTGTGGGCAATGC+TGG 0.413312 5:-89902755 None:intergenic
CTATCTGCAGAAGGCCATAA+AGG 0.427028 5:-89900958 None:intergenic
CCAACCCATTGTTAAAGCTT+CGG 0.427193 5:+89896471 MsG0580028982.01.T01:CDS
CCTTTCTTTGGCTGATGCAC+CGG 0.434505 5:+89898583 MsG0580028982.01.T01:CDS
CCTGCAGCCTTCTGCACCTT+CGG 0.435704 5:-89901282 None:intergenic
TTCAGAACAGTTTCCTTTGT+GGG 0.437378 5:-89902764 None:intergenic
CGAACCATAATGAAAGATCT+TGG 0.441728 5:-89900833 None:intergenic
GCTAAGGCGGTACGTGCACC+AGG 0.444231 5:-89900581 None:intergenic
CGGTAACAAGGAGTAGTTTG+AGG 0.447611 5:-89901262 None:intergenic
ATTATGATACAGGTTTAAGC+AGG 0.460599 5:-89902790 None:intergenic
CCAAGAAGATGAACTAGACT+TGG 0.462137 5:+89900676 MsG0580028982.01.T01:CDS
CGGTAGAGTGGCGGGAATGA+AGG 0.464461 5:+89901770 MsG0580028982.01.T01:CDS
GCTGTAGGCATATCCCGATT+AGG 0.469524 5:+89898644 MsG0580028982.01.T01:CDS
CAGGTTGGTGAGGATGAATT+CGG 0.473756 5:+89900497 MsG0580028982.01.T01:intron
GGAGTAGTTTGAGGTTTGGA+TGG 0.478027 5:-89901253 None:intergenic
AAATGGGAGCCCTGAAACAA+AGG 0.480045 5:+89898499 MsG0580028982.01.T01:CDS
TGAAACAAAGGAATCGCCTC+TGG 0.480047 5:+89898511 MsG0580028982.01.T01:CDS
CTCTCCATTATTAGAACACT+GGG 0.483051 5:-89902879 None:intergenic
CAAAGGCAATACCTGAAAAT+GGG 0.487466 5:+89898483 MsG0580028982.01.T01:CDS
TTGCTAGAAGTGATGTTGAT+TGG 0.489513 5:-89902993 None:intergenic
TTCTTTCTGCTTCACAAGTG+TGG 0.490123 5:+89896417 MsG0580028982.01.T01:CDS
AGCCGATGAACCTCCTAATC+GGG 0.490889 5:-89898657 None:intergenic
TTGGAGAAGCATATCAGCAC+TGG 0.493942 5:-89900657 None:intergenic
AAAACCGAAGCTTTAACAAT+GGG 0.494614 5:-89896475 None:intergenic
CCTTAGCATTTGTTACCCTA+AGG 0.495366 5:+89900597 MsG0580028982.01.T01:CDS
ATTCAGAACAGTTTCCTTTG+TGG 0.496575 5:-89902765 None:intergenic
ATAAAGGAAGCCTCAGGTTA+GGG 0.497182 5:-89900942 None:intergenic
TTAGGAGGAGAATGAGATGA+AGG 0.501955 5:-89896499 None:intergenic
GAATTCAGCGGTAGAGTGGC+GGG 0.505457 5:+89901762 MsG0580028982.01.T01:CDS
TCGTTCTCCATCACTCCTTA+GGG 0.506828 5:-89900612 None:intergenic
CTCAAGTTTGCGAATGCTTG+TGG 0.508829 5:+89902701 MsG0580028982.01.T01:CDS
AGAAGGAATTCTGAGTATAT+GGG 0.508950 5:+89900987 MsG0580028982.01.T01:CDS
TATAACAGAACCATGCAAAT+CGG 0.510105 5:+89900864 MsG0580028982.01.T01:CDS
ATGCCTACAGCAACATTAGC+AGG 0.513767 5:-89898632 None:intergenic
GCAAAGGCTGCAAAAGAAGC+TGG 0.517282 5:+89900901 MsG0580028982.01.T01:CDS
CCGAAGGTGCAGAAGGCTGC+AGG 0.522313 5:+89901282 MsG0580028982.01.T01:CDS
AGTGTGGTTTCTAACCCTCC+TGG 0.524883 5:+89896433 MsG0580028982.01.T01:CDS
CAGGGTCAAAACGCATCCCT+TGG 0.526315 5:-89900562 None:intergenic
GAAAATAATGTAAACAGCCA+AGG 0.527985 5:+89900545 MsG0580028982.01.T01:CDS
AAGAAAGGCCACTAACAGTT+GGG 0.530391 5:-89898568 None:intergenic
AAATTCAACCGAACATTAGG+AGG 0.534291 5:-89896514 None:intergenic
ACTCTCCATTATTAGAACAC+TGG 0.541595 5:-89902880 None:intergenic
CCGGTGCATCAGCCAAAGAA+AGG 0.542352 5:-89898583 None:intergenic
TACAGTTTCGGAGGAAGCAA+AGG 0.543154 5:-89896270 None:intergenic
TGGCTGAATTTAACTGAACC+AGG 0.544221 5:-89896451 None:intergenic
ATCCCGATTAGGAGGTTCAT+CGG 0.545549 5:+89898655 MsG0580028982.01.T01:CDS
AAATATATATAACCTGATGT+TGG 0.551917 5:-89902913 None:intergenic
GCAGTTGACACCACTGGTGC+TGG 0.552715 5:+89901798 MsG0580028982.01.T01:CDS
TTTGTTACCCTAAGGAGTGA+TGG 0.553179 5:+89900605 MsG0580028982.01.T01:CDS
AAAGAAAGGCCACTAACAGT+TGG 0.555253 5:-89898569 None:intergenic
CTTCTGCACCTTCGGTAACA+AGG 0.557864 5:-89901274 None:intergenic
CCGAAGCTTTAACAATGGGT+TGG 0.559271 5:-89896471 None:intergenic
TGGAGAAGCATATCAGCACT+GGG 0.560245 5:-89900656 None:intergenic
TGTTCTATGGCTCTTCAATG+TGG 0.571763 5:+89896394 MsG0580028982.01.T01:exon
ACATTAGCAGGAGCACCACC+TGG 0.573506 5:-89898620 None:intergenic
GAACAACAGCATCATTGTAT+GGG 0.576967 5:-89901220 None:intergenic
AAAATAATGTAAACAGCCAA+GGG 0.579126 5:+89900546 MsG0580028982.01.T01:CDS
CCTTAGGGTAACAAATGCTA+AGG 0.580393 5:-89900597 None:intergenic
CTTGTTACCGAAGGTGCAGA+AGG 0.585420 5:+89901275 MsG0580028982.01.T01:CDS
GCAGGAATTCAGCGGTAGAG+TGG 0.585659 5:+89901758 MsG0580028982.01.T01:intron
GGCACACGTATCTGCAGCAA+AGG 0.587211 5:+89900885 MsG0580028982.01.T01:CDS
GCTCCTGCTAATGTTGCTGT+AGG 0.587693 5:+89898629 MsG0580028982.01.T01:CDS
GATACGTGTGCCGATTTGCA+TGG 0.591108 5:-89900874 None:intergenic
AAGGCCATAAAGGAAGCCTC+AGG 0.593306 5:-89900948 None:intergenic
CTTTGTTACAGGAAAGACAA+AGG 0.596846 5:+89898466 MsG0580028982.01.T01:intron
AATACTATCACAATTAGCTA+CGG 0.601113 5:+89901839 MsG0580028982.01.T01:CDS
TAGAGTGGCGGGAATGAAGG+TGG 0.603673 5:+89901773 MsG0580028982.01.T01:CDS
GGAATTCAGCGGTAGAGTGG+CGG 0.604839 5:+89901761 MsG0580028982.01.T01:intron
TGAATTTAACTGAACCAGGA+GGG 0.610378 5:-89896447 None:intergenic
CATTGAAGAGCCATAGAACA+AGG 0.612318 5:-89896391 None:intergenic
TGTCTTATGACCCTAACCTG+AGG 0.617249 5:+89900932 MsG0580028982.01.T01:CDS
AACAAAGGAATCGCCTCTGG+TGG 0.618641 5:+89898514 MsG0580028982.01.T01:CDS
GTAGGCATATCCCGATTAGG+AGG 0.620851 5:+89898647 MsG0580028982.01.T01:CDS
TCTCTAGCACTATCTGCAGA+AGG 0.622016 5:-89900967 None:intergenic
TTGTTGGATTACAGTTTCGG+AGG 0.623305 5:-89896279 None:intergenic
TATGCTTGCAGATATACTCA+AGG 0.627173 5:+89900523 MsG0580028982.01.T01:CDS
AAACTACTCCTTGTTACCGA+AGG 0.636668 5:+89901266 MsG0580028982.01.T01:CDS
TATTCTTTGCAGGAATTCAG+CGG 0.640550 5:+89901750 MsG0580028982.01.T01:intron
GGAGACTGCAGATATCATCA+AGG 0.647359 5:+89901008 MsG0580028982.01.T01:CDS
TTATGATACAGGTTTAAGCA+GGG 0.652369 5:-89902789 None:intergenic
GCATTGACTGTGACTGAGAG+AGG 0.655698 5:+89902725 MsG0580028982.01.T01:CDS
CTGAATTTAACTGAACCAGG+AGG 0.662901 5:-89896448 None:intergenic
GTGGATGCAGTTGACACCAC+TGG 0.675421 5:+89901792 MsG0580028982.01.T01:CDS
AAAAGCGTCACCAGCACCAG+TGG 0.676240 5:-89901808 None:intergenic
TCTGCAGATAGTGCTAGAGA+AGG 0.676637 5:+89900970 MsG0580028982.01.T01:CDS
AATACCAGCATTGCCCACAA+AGG 0.679434 5:+89902751 MsG0580028982.01.T01:CDS
TAGGGTAACAAATGCTAAGG+CGG 0.682155 5:-89900594 None:intergenic
AGACTTGGACTTAATCACAA+AGG 0.693543 5:+89900691 MsG0580028982.01.T01:CDS
GCAACATGTACAGGTTGGTG+AGG 0.694645 5:+89900487 MsG0580028982.01.T01:intron
TCTCCGAAACAAACCACCAG+AGG 0.694686 5:-89898527 None:intergenic
AGGCTGCAGGTATTACACCA+AGG 0.733944 5:+89901295 MsG0580028982.01.T01:CDS
CTAAGGCGGTACGTGCACCA+GGG 0.735969 5:-89900580 None:intergenic
GGAGAAGCATATCAGCACTG+GGG 0.798655 5:-89900655 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATAAAGAAATCA+TGG - Chr5:89901702-89901721 None:intergenic 10.0%
!! TTCTTGAAAAAAAAAAAAAT+TGG + Chr5:89899926-89899945 MsG0580028982.01.T01:intron 10.0%
!!! AATTTTATGATAAAACATTA+TGG + Chr5:89901610-89901629 MsG0580028982.01.T01:intron 10.0%
!!! AATTTTGAAATCAAATATAA+TGG - Chr5:89898873-89898892 None:intergenic 10.0%
!!! ATTTTGAAATCAAATATAAT+GGG - Chr5:89898872-89898891 None:intergenic 10.0%
!!! TAATGTTTTATCATAAAATT+TGG - Chr5:89901610-89901629 None:intergenic 10.0%
!!! TCTTTATTTTATTTTTTGAA+AGG + Chr5:89901707-89901726 MsG0580028982.01.T01:intron 10.0%
!! AAATCAAAAAAAAACTTTAC+AGG - Chr5:89899847-89899866 None:intergenic 15.0%
!! AATCAAAAAAAAACTTTACA+GGG - Chr5:89899846-89899865 None:intergenic 15.0%
!! ATCAAAAAAAAAATTTACAG+TGG + Chr5:89900008-89900027 MsG0580028982.01.T01:intron 15.0%
!! TAAGATAAATTAAAATGCAA+CGG - Chr5:89902542-89902561 None:intergenic 15.0%
!! TCAAAAAAAAAATTTACAGT+GGG + Chr5:89900009-89900028 MsG0580028982.01.T01:intron 15.0%
!!! AAAAAAATTGGTTTTTTGTT+TGG + Chr5:89899938-89899957 MsG0580028982.01.T01:intron 15.0%
!!! AAAACAAAAAAATTTTACAG+GGG + Chr5:89899980-89899999 MsG0580028982.01.T01:intron 15.0%
!!! AATCAAAACATTATTTTTAC+AGG - Chr5:89899875-89899894 None:intergenic 15.0%
!!! ATCAAAACATTATTTTTACA+GGG - Chr5:89899874-89899893 None:intergenic 15.0%
!!! CAAAACAAAAAAATTTTACA+GGG + Chr5:89899979-89899998 MsG0580028982.01.T01:intron 15.0%
!!! TCAAAACAAAAAAATTTTAC+AGG + Chr5:89899978-89899997 MsG0580028982.01.T01:intron 15.0%
!! AAAAAGTGATTATAAATAGG+AGG - Chr5:89899141-89899160 None:intergenic 20.0%
!! AAATATATATAACCTGATGT+TGG - Chr5:89902916-89902935 None:intergenic 20.0%
!! AACATCCTATATATATTTCA+TGG - Chr5:89898934-89898953 None:intergenic 20.0%
!! ATAAGCATTTATATGATAAG+TGG + Chr5:89902323-89902342 MsG0580028982.01.T01:intron 20.0%
!! ATAGGTATATCCTAAATTTA+AGG - Chr5:89902390-89902409 None:intergenic 20.0%
!! ATATTGCATTCAAATGTAAT+GGG + Chr5:89898014-89898033 MsG0580028982.01.T01:intron 20.0%
!! ATCAAAAAAAAACTTTACAG+GGG - Chr5:89899845-89899864 None:intergenic 20.0%
!! ATTAGGTAATTCTTGTAAAA+TGG - Chr5:89900258-89900277 None:intergenic 20.0%
!! CAAAAAAAAAATTTACAGTG+GGG + Chr5:89900010-89900029 MsG0580028982.01.T01:intron 20.0%
!! CATATAAGTGTTTATGTATA+AGG + Chr5:89896887-89896906 MsG0580028982.01.T01:intron 20.0%
!! GTAAAAATTGTTCATGATAA+GGG - Chr5:89900092-89900111 None:intergenic 20.0%
!! GTTGTTTGGTTAAAATATTT+GGG - Chr5:89901918-89901937 None:intergenic 20.0%
!! TAAGTATGTCTATAATTATG+TGG + Chr5:89900327-89900346 MsG0580028982.01.T01:intron 20.0%
!! TAGGTATATCCTAAATTTAA+GGG - Chr5:89902389-89902408 None:intergenic 20.0%
!! TCAAATAAGTCATTTCAAAT+AGG + Chr5:89897087-89897106 MsG0580028982.01.T01:intron 20.0%
!! TCAAATATTACTTGTAATGA+GGG - Chr5:89899585-89899604 None:intergenic 20.0%
!! TTCAAATATTACTTGTAATG+AGG - Chr5:89899586-89899605 None:intergenic 20.0%
!! TTGTTCCATGAAATATATAT+AGG + Chr5:89898926-89898945 MsG0580028982.01.T01:intron 20.0%
!!! AAGAAATTTTCGTTTTTGTT+TGG - Chr5:89899911-89899930 None:intergenic 20.0%
!!! AATTATAAGAACCACTTTTT+AGG + Chr5:89897318-89897337 MsG0580028982.01.T01:intron 20.0%
!!! ATAAAGTTGATAAATGTAGA+TGG - Chr5:89900114-89900133 None:intergenic 20.0%
!!! ATAACAATGATTTGAAATGA+CGG - Chr5:89901398-89901417 None:intergenic 20.0%
!!! ATTAGTCCATTTAATTTACT+TGG + Chr5:89897754-89897773 MsG0580028982.01.T01:intron 20.0%
!!! ATTATTTTTTGGCGAATTTT+AGG + Chr5:89902826-89902845 MsG0580028982.01.T01:three_prime_UTR 20.0%
!!! ATTTTCTTGGTAATTATCAA+GGG + Chr5:89897564-89897583 MsG0580028982.01.T01:intron 20.0%
!!! CAAAAAATTTAGCTCATTTA+AGG - Chr5:89896623-89896642 None:intergenic 20.0%
!!! CCTATTTATAATCACTTTTT+GGG + Chr5:89899141-89899160 MsG0580028982.01.T01:intron 20.0%
!!! GTAGATCAATTTTTTTTTTG+TGG + Chr5:89901952-89901971 MsG0580028982.01.T01:intron 20.0%
!!! TCAAAACATTATTTTTACAG+GGG - Chr5:89899873-89899892 None:intergenic 20.0%
!!! TCCTATTTATAATCACTTTT+TGG + Chr5:89899140-89899159 MsG0580028982.01.T01:intron 20.0%
!!! TTAGTCCATTTAATTTACTT+GGG + Chr5:89897755-89897774 MsG0580028982.01.T01:intron 20.0%
!!! TTCTGTTATTTATTTCTTAC+AGG + Chr5:89900810-89900829 MsG0580028982.01.T01:intron 20.0%
!!! TTTTCTAGAATAAGAATTAC+AGG + Chr5:89901095-89901114 MsG0580028982.01.T01:intron 20.0%
! AAAATAATGTAAACAGCCAA+GGG + Chr5:89900546-89900565 MsG0580028982.01.T01:CDS 25.0%
! AAAGTGGTTCTTATAATTCA+AGG - Chr5:89897316-89897335 None:intergenic 25.0%
! AAGTGGTTCTTATAATTCAA+GGG - Chr5:89897315-89897334 None:intergenic 25.0%
! AATACTATCACAATTAGCTA+CGG + Chr5:89901839-89901858 MsG0580028982.01.T01:CDS 25.0%
! AATCTTGTTGAAATTGAGTT+TGG - Chr5:89900455-89900474 None:intergenic 25.0%
! ACGACAATAATATAAGCATT+AGG - Chr5:89900783-89900802 None:intergenic 25.0%
! ATATTTCATGGAACAAAACA+GGG - Chr5:89898922-89898941 None:intergenic 25.0%
! ATTTCTTAACTCATTTGCAT+TGG - Chr5:89902059-89902078 None:intergenic 25.0%
! CCCAAAAAGTGATTATAAAT+AGG - Chr5:89899144-89899163 None:intergenic 25.0%
! GATATTGCATTCAAATGTAA+TGG + Chr5:89898013-89898032 MsG0580028982.01.T01:intron 25.0%
! GATTATTCATTTCACTAACA+CGG - Chr5:89899246-89899265 None:intergenic 25.0%
! GGTAAAAATTGTTCATGATA+AGG - Chr5:89900093-89900112 None:intergenic 25.0%
! GGTTGTTTGGTTAAAATATT+TGG - Chr5:89901919-89901938 None:intergenic 25.0%
! TATATCCTAAATTTAAGGGT+CGG - Chr5:89902385-89902404 None:intergenic 25.0%
! TATATTTCATGGAACAAAAC+AGG - Chr5:89898923-89898942 None:intergenic 25.0%
! TATCTAATTACACATAGAGT+AGG + Chr5:89901361-89901380 MsG0580028982.01.T01:intron 25.0%
! TATTGCATTCAAATGTAATG+GGG + Chr5:89898015-89898034 MsG0580028982.01.T01:intron 25.0%
! TCAAAAAAAAACTTTACAGG+GGG - Chr5:89899844-89899863 None:intergenic 25.0%
! TTAAAATTCAACCGAACATT+AGG - Chr5:89896520-89896539 None:intergenic 25.0%
! TTAGAAATAGACATAACTGA+TGG + Chr5:89899019-89899038 MsG0580028982.01.T01:intron 25.0%
! TTATTGTTTCATGAAACTGT+AGG + Chr5:89896684-89896703 MsG0580028982.01.T01:intron 25.0%
! TTTAAAGGTAATTCAGTTCT+GGG + Chr5:89896535-89896554 MsG0580028982.01.T01:intron 25.0%
! TTTCTTAACTCATTTGCATT+GGG - Chr5:89902058-89902077 None:intergenic 25.0%
!! AATGTTCGGTTGAATTTTAA+AGG + Chr5:89896520-89896539 MsG0580028982.01.T01:CDS 25.0%
!! AGCACATTAATGTAATGTTT+TGG - Chr5:89902467-89902486 None:intergenic 25.0%
!! ATTTTCATTTTCAGTTCATG+TGG + Chr5:89902948-89902967 MsG0580028982.01.T01:three_prime_UTR 25.0%
!! CTAACAGCACAAATTTTTAA+GGG + Chr5:89899265-89899284 MsG0580028982.01.T01:intron 25.0%
!! GAGATTTCTTTTCTTACAAA+TGG + Chr5:89901191-89901210 MsG0580028982.01.T01:CDS 25.0%
!! GAGTTTTCACTACATTATAT+AGG - Chr5:89902408-89902427 None:intergenic 25.0%
!! TCTAACAGCACAAATTTTTA+AGG + Chr5:89899264-89899283 MsG0580028982.01.T01:intron 25.0%
!! TGAATTGAGTTATGATTTGT+TGG - Chr5:89896298-89896317 None:intergenic 25.0%
!! TGATATTGAGTACATTTTGA+TGG - Chr5:89899441-89899460 None:intergenic 25.0%
!!! AAAACATTATTTTTACAGGG+GGG - Chr5:89899871-89899890 None:intergenic 25.0%
!!! AGCTTTATTTTATTCTTTGC+AGG + Chr5:89901740-89901759 MsG0580028982.01.T01:intron 25.0%
!!! AGTTAAGAATGTTGATGATT+TGG + Chr5:89896743-89896762 MsG0580028982.01.T01:intron 25.0%
!!! ATCTAAGGTGATATTTTTCT+AGG - Chr5:89899631-89899650 None:intergenic 25.0%
!!! ATGCAGTTTTATCATCAATT+TGG + Chr5:89897454-89897473 MsG0580028982.01.T01:intron 25.0%
!!! ATTGACTTGTGAATCTTATT+GGG + Chr5:89899296-89899315 MsG0580028982.01.T01:intron 25.0%
!!! CAAAACATTATTTTTACAGG+GGG - Chr5:89899872-89899891 None:intergenic 25.0%
!!! CACATTCGAGTATTATTTTT+TGG + Chr5:89902815-89902834 MsG0580028982.01.T01:three_prime_UTR 25.0%
!!! CATTTTCTTGGTAATTATCA+AGG + Chr5:89897563-89897582 MsG0580028982.01.T01:intron 25.0%
!!! CTTCTCTTATAGTTTTTTCT+AGG - Chr5:89901552-89901571 None:intergenic 25.0%
!!! GAAATTAAACTTGTTATTGC+TGG + Chr5:89902074-89902093 MsG0580028982.01.T01:intron 25.0%
!!! TAACAGCACAAATTTTTAAG+GGG + Chr5:89899266-89899285 MsG0580028982.01.T01:intron 25.0%
!!! TGCAGTTTTATCATCAATTT+GGG + Chr5:89897455-89897474 MsG0580028982.01.T01:intron 25.0%
!!! TTTTAAAGGTAATTCAGTTC+TGG + Chr5:89896534-89896553 MsG0580028982.01.T01:intron 25.0%
AAAATCAGCATATAAGGTGA+GGG + Chr5:89899112-89899131 MsG0580028982.01.T01:intron 30.0%
AAACCTCAAAATTAACCCAA+AGG + Chr5:89899484-89899503 MsG0580028982.01.T01:intron 30.0%
AAACTATAAGAGAAGCTATC+TGG + Chr5:89901557-89901576 MsG0580028982.01.T01:intron 30.0%
AACGAAACATAACACACTAT+TGG - Chr5:89901076-89901095 None:intergenic 30.0%
AACTGCCCAAGTAAATTAAA+TGG - Chr5:89897763-89897782 None:intergenic 30.0%
AAGGATGTTTATCAATGTTG+TGG + Chr5:89897882-89897901 MsG0580028982.01.T01:intron 30.0%
AATAATAAAAGGTTGAGGCA+TGG + Chr5:89897805-89897824 MsG0580028982.01.T01:intron 30.0%
ACAAGATATGCCTATTTGTT+TGG + Chr5:89896824-89896843 MsG0580028982.01.T01:intron 30.0%
AGAAGGAATTCTGAGTATAT+GGG + Chr5:89900987-89901006 MsG0580028982.01.T01:CDS 30.0%
AGCAGAAATTACATAGTTAG+GGG - Chr5:89900375-89900394 None:intergenic 30.0%
AGGCTAATAATAAAAGGTTG+AGG + Chr5:89897800-89897819 MsG0580028982.01.T01:intron 30.0%
AGTGGTTCTTATAATTCAAG+GGG - Chr5:89897314-89897333 None:intergenic 30.0%
ATGTCAAGCAAAGTCAATAT+TGG - Chr5:89898783-89898802 None:intergenic 30.0%
ATTAACCACCTCTTAGAATT+CGG + Chr5:89899066-89899085 MsG0580028982.01.T01:intron 30.0%
ATTATGATACAGGTTTAAGC+AGG - Chr5:89902793-89902812 None:intergenic 30.0%
CAAAAAAAAACTTTACAGGG+GGG - Chr5:89899843-89899862 None:intergenic 30.0%
CAATTTCTTCAATAGTCGTA+TGG + Chr5:89899760-89899779 MsG0580028982.01.T01:intron 30.0%
CAGCAGAAATTACATAGTTA+GGG - Chr5:89900376-89900395 None:intergenic 30.0%
CATTGTTATAGAATCCATGT+TGG + Chr5:89901409-89901428 MsG0580028982.01.T01:intron 30.0%
CGAATGTGAAATTATGATAC+AGG - Chr5:89902803-89902822 None:intergenic 30.0%
CGTTTAGAAAAACATGTACA+AGG - Chr5:89902636-89902655 None:intergenic 30.0%
CTAATTCTCTGATATCTTTC+TGG + Chr5:89902575-89902594 MsG0580028982.01.T01:intron 30.0%
CTTAAATGAGCCAAAAGAAA+GGG - Chr5:89900165-89900184 None:intergenic 30.0%
GAAAATAATGTAAACAGCCA+AGG + Chr5:89900545-89900564 MsG0580028982.01.T01:CDS 30.0%
GAAATGACCTATATTACAGA+GGG - Chr5:89899814-89899833 None:intergenic 30.0%
GCTTAAAGAAATATCTTACG+TGG + Chr5:89902246-89902265 MsG0580028982.01.T01:intron 30.0%
GGACTATAATGATAAGTAGA+TGG - Chr5:89898964-89898983 None:intergenic 30.0%
GGCAATTGAATGAATGAAAT+TGG + Chr5:89896705-89896724 MsG0580028982.01.T01:intron 30.0%
GTGTGTATCACCTTATAAAT+TGG + Chr5:89899506-89899525 MsG0580028982.01.T01:intron 30.0%
TACATTTGAATGCAATATCC+CGG - Chr5:89898012-89898031 None:intergenic 30.0%
TATAACAGAACCATGCAAAT+CGG + Chr5:89900864-89900883 MsG0580028982.01.T01:CDS 30.0%
TCTCAACATTTCTTTGTTAC+AGG + Chr5:89898455-89898474 MsG0580028982.01.T01:intron 30.0%
TCTGTAATATAGGTCATTTC+CGG + Chr5:89899814-89899833 MsG0580028982.01.T01:intron 30.0%
TGGTTTAAGAAAACAACTTG+CGG + Chr5:89902094-89902113 MsG0580028982.01.T01:intron 30.0%
TGTACTTTATTGTGCAACTT+AGG + Chr5:89898750-89898769 MsG0580028982.01.T01:intron 30.0%
TTAAATGAGCCAAAAGAAAG+GGG - Chr5:89900164-89900183 None:intergenic 30.0%
TTATGATACAGGTTTAAGCA+GGG - Chr5:89902792-89902811 None:intergenic 30.0%
TTCTGTGTCATCATCTTTAA+TGG - Chr5:89899340-89899359 None:intergenic 30.0%
TTTAGAGATGTGTGTAATTG+AGG + Chr5:89898354-89898373 MsG0580028982.01.T01:intron 30.0%
TTTCTGTAAATATAAGCGAG+AGG - Chr5:89899414-89899433 None:intergenic 30.0%
! AAAAACCGAAGCTTTAACAA+TGG - Chr5:89896479-89896498 None:intergenic 30.0%
! AAAACCGAAGCTTTAACAAT+GGG - Chr5:89896478-89896497 None:intergenic 30.0%
! AAGTGATTTTCCTTGTTCTA+TGG + Chr5:89896381-89896400 MsG0580028982.01.T01:exon 30.0%
! AATCCATGTTGGTAGAAAAT+AGG + Chr5:89901420-89901439 MsG0580028982.01.T01:intron 30.0%
! AATTTTAAGCCTCGCTATTT+TGG + Chr5:89897132-89897151 MsG0580028982.01.T01:intron 30.0%
! AGAACAGTGTTGAATGTTAA+TGG - Chr5:89896337-89896356 None:intergenic 30.0%
! ATACTTTAAGCAGCTTTATC+TGG + Chr5:89897244-89897263 MsG0580028982.01.T01:intron 30.0%
! ATGATTTGGCACAATAAAAG+AGG + Chr5:89896757-89896776 MsG0580028982.01.T01:intron 30.0%
! ATTTAATTTACTTGGGCAGT+TGG + Chr5:89897762-89897781 MsG0580028982.01.T01:intron 30.0%
! GTTTTATCATCAATTTGGGA+TGG + Chr5:89897459-89897478 MsG0580028982.01.T01:intron 30.0%
!! AAAAGGTATTCGGGTATTTA+TGG + Chr5:89897512-89897531 MsG0580028982.01.T01:intron 30.0%
!! CATTGACTTGTGAATCTTAT+TGG + Chr5:89899295-89899314 MsG0580028982.01.T01:intron 30.0%
!! GATTTGTTGGATTACAGTTT+CGG - Chr5:89896285-89896304 None:intergenic 30.0%
!! GGCTTTAAATTGCAGTATTA+AGG - Chr5:89902030-89902049 None:intergenic 30.0%
!! GTTATGTCTATTTCTAACAG+AGG - Chr5:89899016-89899035 None:intergenic 30.0%
!! TGGGATTATTTTGTAGATCA+GGG + Chr5:89898196-89898215 MsG0580028982.01.T01:intron 30.0%
!!! ACCTTATATGCTGATTTTGT+AGG - Chr5:89899110-89899129 None:intergenic 30.0%
!!! CCTTATATGCTGATTTTGTA+GGG - Chr5:89899109-89899128 None:intergenic 30.0%
!!! TGACATCCATATGTTGTTTT+CGG - Chr5:89897007-89897026 None:intergenic 30.0%
!!! TGTTTTGATTTACCCCTAAT+AGG + Chr5:89899885-89899904 MsG0580028982.01.T01:intron 30.0%
AAATATCACCTTAGATCACC+AGG + Chr5:89899635-89899654 MsG0580028982.01.T01:intron 35.0%
AAATTCAACCGAACATTAGG+AGG - Chr5:89896517-89896536 None:intergenic 35.0%
AAATTTACAGTGGGGAAAAC+CGG + Chr5:89900018-89900037 MsG0580028982.01.T01:intron 35.0%
AAGGTTCTTCTCTCATCAAT+AGG + Chr5:89901027-89901046 MsG0580028982.01.T01:intron 35.0%
ACAAAGGCAATACCTGAAAA+TGG + Chr5:89898482-89898501 MsG0580028982.01.T01:CDS 35.0%
ACATTTGAATGCAATATCCC+GGG - Chr5:89898011-89898030 None:intergenic 35.0%
ACCACTCATAGAATAAGCAA+GGG - Chr5:89897981-89898000 None:intergenic 35.0%
ACGATTATTGCAACATGTAC+AGG + Chr5:89900478-89900497 MsG0580028982.01.T01:intron 35.0%
ACTATGTAATTTCTGCTGCT+TGG + Chr5:89900378-89900397 MsG0580028982.01.T01:intron 35.0%
ACTCTCCATTATTAGAACAC+TGG - Chr5:89902883-89902902 None:intergenic 35.0%
AGAACCCAGTGTTCTAATAA+TGG + Chr5:89902875-89902894 MsG0580028982.01.T01:three_prime_UTR 35.0%
AGACAATACCTTGATATCCT+CGG - Chr5:89897926-89897945 None:intergenic 35.0%
AGACTGTTCATGAGAACTTA+TGG - Chr5:89897040-89897059 None:intergenic 35.0%
AGACTTGGACTTAATCACAA+AGG + Chr5:89900691-89900710 MsG0580028982.01.T01:CDS 35.0%
AGGTTCTTCTCTCATCAATA+GGG + Chr5:89901028-89901047 MsG0580028982.01.T01:intron 35.0%
AGTCGTTTCTCCAAACAAAT+AGG - Chr5:89896837-89896856 None:intergenic 35.0%
ATAAGGTGATACACACCTTT+GGG - Chr5:89899502-89899521 None:intergenic 35.0%
ATAGCGAGGCTTAAAATTCA+AGG - Chr5:89897130-89897149 None:intergenic 35.0%
ATTAGGCCGAAAACAACATA+TGG + Chr5:89896998-89897017 MsG0580028982.01.T01:intron 35.0%
ATTCAGAACAGTTTCCTTTG+TGG - Chr5:89902768-89902787 None:intergenic 35.0%
CAAAATCAGCATATAAGGTG+AGG + Chr5:89899111-89899130 MsG0580028982.01.T01:intron 35.0%
CAAAGGCAATACCTGAAAAT+GGG + Chr5:89898483-89898502 MsG0580028982.01.T01:CDS 35.0%
CATTAGGTATGAAGTTACAG+TGG - Chr5:89900767-89900786 None:intergenic 35.0%
CATTGTTAGGATTCTCACAT+TGG - Chr5:89897168-89897187 None:intergenic 35.0%
CCCTACAAAATCAGCATATA+AGG + Chr5:89899106-89899125 MsG0580028982.01.T01:intron 35.0%
CCTTAAATGAGCCAAAAGAA+AGG - Chr5:89900166-89900185 None:intergenic 35.0%
CGAACCATAATGAAAGATCT+TGG - Chr5:89900836-89900855 None:intergenic 35.0%
CGTCACAAAAACACAATCTT+GGG - Chr5:89897647-89897666 None:intergenic 35.0%
CTCTCCATTATTAGAACACT+GGG - Chr5:89902882-89902901 None:intergenic 35.0%
CTGATCTACAAAATAATCCC+AGG - Chr5:89898197-89898216 None:intergenic 35.0%
CTTATTCTATGAGTGGTGTT+GGG + Chr5:89897984-89898003 MsG0580028982.01.T01:intron 35.0%
CTTTGTTACAGGAAAGACAA+AGG + Chr5:89898466-89898485 MsG0580028982.01.T01:intron 35.0%
GAACAACAGCATCATTGTAT+GGG - Chr5:89901223-89901242 None:intergenic 35.0%
GAGAAGGAATTCTGAGTATA+TGG + Chr5:89900986-89901005 MsG0580028982.01.T01:CDS 35.0%
GAGGAGAGGCTAATAATAAA+AGG + Chr5:89897794-89897813 MsG0580028982.01.T01:intron 35.0%
GATGTTTATCAATGTTGTGG+AGG + Chr5:89897885-89897904 MsG0580028982.01.T01:intron 35.0%
GCAGCAGAAATTACATAGTT+AGG - Chr5:89900377-89900396 None:intergenic 35.0%
GGAAATGACCTATATTACAG+AGG - Chr5:89899815-89899834 None:intergenic 35.0%
GTCATTCTTTATCCAACATC+AGG + Chr5:89902901-89902920 MsG0580028982.01.T01:three_prime_UTR 35.0%
GTCTTTACCCTCTGTAATAT+AGG + Chr5:89899804-89899823 MsG0580028982.01.T01:intron 35.0%
GTGACATATTTCGTCATTGA+GGG - Chr5:89898985-89899004 None:intergenic 35.0%
GTGTCATCATCTTTAATGGT+TGG - Chr5:89899336-89899355 None:intergenic 35.0%
GTTCGTTCTATACACTTTAC+AGG + Chr5:89898715-89898734 MsG0580028982.01.T01:intron 35.0%
TAACACATTTCCCAAAGGAA+GGG + Chr5:89898831-89898850 MsG0580028982.01.T01:intron 35.0%
TACGGATCTTTCATTACTTC+AGG + Chr5:89901857-89901876 MsG0580028982.01.T01:CDS 35.0%
TACTTATAGTTGAGTCCAGA+TGG - Chr5:89901343-89901362 None:intergenic 35.0%
TAGCGAGGCTTAAAATTCAA+GGG - Chr5:89897129-89897148 None:intergenic 35.0%
TAGGAGAGTGAGATCAAAAT+AGG + Chr5:89901516-89901535 MsG0580028982.01.T01:intron 35.0%
TATAAGGTGATACACACCTT+TGG - Chr5:89899503-89899522 None:intergenic 35.0%
TATGCTTGCAGATATACTCA+AGG + Chr5:89900523-89900542 MsG0580028982.01.T01:CDS 35.0%
TATGGTGTAGTAGGAATGAA+AGG + Chr5:89897863-89897882 MsG0580028982.01.T01:intron 35.0%
TATTCTTTGCAGGAATTCAG+CGG + Chr5:89901750-89901769 MsG0580028982.01.T01:intron 35.0%
TATTTGGCATGCGACAATTT+GGG + Chr5:89897837-89897856 MsG0580028982.01.T01:intron 35.0%
TCCAAAATTACAACTCCATC+TGG + Chr5:89901325-89901344 MsG0580028982.01.T01:intron 35.0%
TCGTCACAAAAACACAATCT+TGG - Chr5:89897648-89897667 None:intergenic 35.0%
TGAATTTAACTGAACCAGGA+GGG - Chr5:89896450-89896469 None:intergenic 35.0%
TTAACCACCTCTTAGAATTC+GGG + Chr5:89899067-89899086 MsG0580028982.01.T01:intron 35.0%
TTACTCGAGTATGAGATGTA+GGG - Chr5:89898814-89898833 None:intergenic 35.0%
TTATTGCAACATGTACAGGT+TGG + Chr5:89900482-89900501 MsG0580028982.01.T01:intron 35.0%
TTATTTGGCATGCGACAATT+TGG + Chr5:89897836-89897855 MsG0580028982.01.T01:intron 35.0%
TTCAGAACAGTTTCCTTTGT+GGG - Chr5:89902767-89902786 None:intergenic 35.0%
TTTGTTAGGAGTCCTACATT+GGG - Chr5:89897352-89897371 None:intergenic 35.0%
! AAAAGAGGTGCAAAGATGTT+AGG + Chr5:89896772-89896791 MsG0580028982.01.T01:intron 35.0%
! AAAATAGGCTTAGGTGGTTT+TGG + Chr5:89901435-89901454 MsG0580028982.01.T01:intron 35.0%
! AAGCCTATTTTCTACCAACA+TGG - Chr5:89901426-89901445 None:intergenic 35.0%
! AGGTGGTTAATTGACTTAAC+GGG - Chr5:89899057-89899076 None:intergenic 35.0%
! AGTTTGTGTGTGTTTTTCGT+AGG + Chr5:89898154-89898173 MsG0580028982.01.T01:intron 35.0%
! ATGCATTTGTTGCAACTAAG+TGG + Chr5:89897428-89897447 MsG0580028982.01.T01:intron 35.0%
! ATGTTTTTCTAAACGCTACG+CGG + Chr5:89902641-89902660 MsG0580028982.01.T01:intron 35.0%
! CAATAGCTTTTCGAAGCATA+AGG - Chr5:89897612-89897631 None:intergenic 35.0%
! CTGTTTTGTACTTGCACATA+GGG + Chr5:89902131-89902150 MsG0580028982.01.T01:intron 35.0%
! GAGGTGGTTAATTGACTTAA+CGG - Chr5:89899058-89899077 None:intergenic 35.0%
! GATGGAGTTGTAATTTTGGA+AGG - Chr5:89901325-89901344 None:intergenic 35.0%
! GTTAGGAGTATAAGCCTTAA+GGG + Chr5:89896789-89896808 MsG0580028982.01.T01:intron 35.0%
! TCCAGATGGAGTTGTAATTT+TGG - Chr5:89901329-89901348 None:intergenic 35.0%
! TCTGTTTTGTACTTGCACAT+AGG + Chr5:89902130-89902149 MsG0580028982.01.T01:intron 35.0%
! TGATCTACACACGAGTTTTA+TGG - Chr5:89901940-89901959 None:intergenic 35.0%
! TGCTTCTTTAGTTTCACTTC+TGG + Chr5:89898402-89898421 MsG0580028982.01.T01:intron 35.0%
! TGTTAGGAGTATAAGCCTTA+AGG + Chr5:89896788-89896807 MsG0580028982.01.T01:intron 35.0%
! TGTTGGTAGAAAATAGGCTT+AGG + Chr5:89901426-89901445 MsG0580028982.01.T01:intron 35.0%
! TTTTGTTAGGAGTCCTACAT+TGG - Chr5:89897353-89897372 None:intergenic 35.0%
!! ACACCTTTGGGTTAATTTTG+AGG - Chr5:89899490-89899509 None:intergenic 35.0%
!! ACACGAGTTTTATGGTTGTT+TGG - Chr5:89901932-89901951 None:intergenic 35.0%
!! AGGATATCAAGGTATTGTCT+TGG + Chr5:89897926-89897945 MsG0580028982.01.T01:intron 35.0%
!! AGGTGTTTATGTTTTGCTGT+CGG + Chr5:89898044-89898063 MsG0580028982.01.T01:intron 35.0%
!! ATATCAAGGTATTGTCTTGG+AGG + Chr5:89897929-89897948 MsG0580028982.01.T01:intron 35.0%
!! CGTTTTTGTTTGGCCTATTA+GGG - Chr5:89899901-89899920 None:intergenic 35.0%
!! CTGGGATTATTTTGTAGATC+AGG + Chr5:89898195-89898214 MsG0580028982.01.T01:intron 35.0%
!! GTGTTTTTGTGACGAATTTG+TGG + Chr5:89897653-89897672 MsG0580028982.01.T01:intron 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG - Chr5:89899900-89899919 None:intergenic 35.0%
!! TAATTTTGGAAGGCATACCT+TGG - Chr5:89901315-89901334 None:intergenic 35.0%
!! TATCACCCAATGAAGTATTG+TGG - Chr5:89897227-89897246 None:intergenic 35.0%
!! TCGTTTTTGTTTGGCCTATT+AGG - Chr5:89899902-89899921 None:intergenic 35.0%
!!! CCTTTCTTTTGGCTCATTTA+AGG + Chr5:89900163-89900182 MsG0580028982.01.T01:intron 35.0%
!!! GATCAGGGTGTTTTGTTTTT+TGG + Chr5:89898211-89898230 MsG0580028982.01.T01:intron 35.0%
!!! GTTTTTTGTTTGGCCTACTA+GGG + Chr5:89899948-89899967 MsG0580028982.01.T01:intron 35.0%
!!! TTCATCGGCTTTTATTGGAA+AGG + Chr5:89898670-89898689 MsG0580028982.01.T01:CDS 35.0%
!!! TTTTTTGTTTGGCCTACTAG+GGG + Chr5:89899949-89899968 MsG0580028982.01.T01:intron 35.0%
AAACTACTCCTTGTTACCGA+AGG + Chr5:89901266-89901285 MsG0580028982.01.T01:CDS 40.0%
AAAGAAAGGCCACTAACAGT+TGG - Chr5:89898572-89898591 None:intergenic 40.0%
AACACAAACAGCACAAACCA+AGG - Chr5:89898110-89898129 None:intergenic 40.0%
AACTGTTAGTGGCCTTTCTT+TGG + Chr5:89898571-89898590 MsG0580028982.01.T01:CDS 40.0%
AAGAAAGGCCACTAACAGTT+GGG - Chr5:89898571-89898590 None:intergenic 40.0%
AATAATACACGGTTCCTTGC+CGG + Chr5:89900218-89900237 MsG0580028982.01.T01:intron 40.0%
AATGGAGCTACTCATCAAAC+CGG - Chr5:89900240-89900259 None:intergenic 40.0%
ACAAACTGTGCACAAAACTC+AGG - Chr5:89898141-89898160 None:intergenic 40.0%
ACACAAACAGCACAAACCAA+GGG - Chr5:89898109-89898128 None:intergenic 40.0%
ACACAATCTTGGGAACTTTG+TGG - Chr5:89897637-89897656 None:intergenic 40.0%
ACCGGAAATGACCTATATAC+AGG + Chr5:89900036-89900055 MsG0580028982.01.T01:intron 40.0%
ACTCATACCCGAATTCTAAG+AGG - Chr5:89899077-89899096 None:intergenic 40.0%
AGAACAAATTTCGTGCCTTC+AGG - Chr5:89899667-89899686 None:intergenic 40.0%
AGCATAAGGTTTCGTCTAGT+TGG - Chr5:89897598-89897617 None:intergenic 40.0%
AGCGAGGCTTAAAATTCAAG+GGG - Chr5:89897128-89897147 None:intergenic 40.0%
ATAAAGGAAGCCTCAGGTTA+GGG - Chr5:89900945-89900964 None:intergenic 40.0%
ATGCGACAATTTGGGTGATA+TGG + Chr5:89897845-89897864 MsG0580028982.01.T01:intron 40.0%
ATTCCGTAAAACTGTAGAGC+AGG - Chr5:89899537-89899556 None:intergenic 40.0%
CACCACTCATAGAATAAGCA+AGG - Chr5:89897982-89898001 None:intergenic 40.0%
CAGGCCAAGATCTTTCATTA+TGG + Chr5:89900829-89900848 MsG0580028982.01.T01:intron 40.0%
CATGATAAGGGATCTCTGAA+GGG - Chr5:89900080-89900099 None:intergenic 40.0%
CATTGAAGAGCCATAGAACA+AGG - Chr5:89896394-89896413 None:intergenic 40.0%
CCAACCCATTGTTAAAGCTT+CGG + Chr5:89896471-89896490 MsG0580028982.01.T01:CDS 40.0%
CCAAGAAGATGAACTAGACT+TGG + Chr5:89900676-89900695 MsG0580028982.01.T01:CDS 40.0%
CCACTCATAGAATAAGCAAG+GGG - Chr5:89897980-89897999 None:intergenic 40.0%
CCACTCCACAATACTTCATT+GGG + Chr5:89897219-89897238 MsG0580028982.01.T01:intron 40.0%
CCCTGTATATAGGTCATTTC+CGG - Chr5:89900040-89900059 None:intergenic 40.0%
CCGGAAATGACCTATATACA+GGG + Chr5:89900037-89900056 MsG0580028982.01.T01:intron 40.0%
CCTTAGGGTAACAAATGCTA+AGG - Chr5:89900600-89900619 None:intergenic 40.0%
CGAAACCGACCCTTAAATTT+AGG + Chr5:89902377-89902396 MsG0580028982.01.T01:intron 40.0%
CGAACAACAGCATCATTGTA+TGG - Chr5:89901224-89901243 None:intergenic 40.0%
CGGAAATGACCTATATACAG+GGG + Chr5:89900038-89900057 MsG0580028982.01.T01:intron 40.0%
CGGTTTAAACTTGCAGAAAG+AGG + Chr5:89902661-89902680 MsG0580028982.01.T01:intron 40.0%
CTCATTCTCCTCCTAATGTT+CGG + Chr5:89896506-89896525 MsG0580028982.01.T01:CDS 40.0%
CTGAATTTAACTGAACCAGG+AGG - Chr5:89896451-89896470 None:intergenic 40.0%
CTTAACTCATTTGCATTGGG+TGG - Chr5:89902055-89902074 None:intergenic 40.0%
GAAAATGCTACCACCTTAGA+TGG - Chr5:89897550-89897569 None:intergenic 40.0%
GAAATGACCTATATACAGGG+GGG + Chr5:89900040-89900059 MsG0580028982.01.T01:intron 40.0%
GATAGCTTACCAAAATAGCG+AGG - Chr5:89897144-89897163 None:intergenic 40.0%
GATGCTGATGCATTGAAGAT+TGG + Chr5:89896592-89896611 MsG0580028982.01.T01:intron 40.0%
GCTTATTCTATGAGTGGTGT+TGG + Chr5:89897983-89898002 MsG0580028982.01.T01:intron 40.0%
GGAAATGACCTATATACAGG+GGG + Chr5:89900039-89900058 MsG0580028982.01.T01:intron 40.0%
GGGAAGTCTTACCTAAAAAG+TGG - Chr5:89897332-89897351 None:intergenic 40.0%
GGTGACATATTTCGTCATTG+AGG - Chr5:89898986-89899005 None:intergenic 40.0%
GTAACACATTTCCCAAAGGA+AGG + Chr5:89898830-89898849 MsG0580028982.01.T01:intron 40.0%
GTCTCGCGTAAAATGTGATA+TGG - Chr5:89899167-89899186 None:intergenic 40.0%
GTGCAAGTACAAAACAGAAG+CGG - Chr5:89902128-89902147 None:intergenic 40.0%
GTTACTCGAGTATGAGATGT+AGG - Chr5:89898815-89898834 None:intergenic 40.0%
TAGGGTAACAAATGCTAAGG+CGG - Chr5:89900597-89900616 None:intergenic 40.0%
TAGGTAAGACTTCCCAATGT+AGG + Chr5:89897337-89897356 MsG0580028982.01.T01:intron 40.0%
TCAAACAGTGGTGCATTGTT+AGG - Chr5:89897181-89897200 None:intergenic 40.0%
TCAGTTCATGTGGTTGCATA+TGG + Chr5:89902958-89902977 MsG0580028982.01.T01:three_prime_UTR 40.0%
TCATGATAAGGGATCTCTGA+AGG - Chr5:89900081-89900100 None:intergenic 40.0%
TCCACTCCACAATACTTCAT+TGG + Chr5:89897218-89897237 MsG0580028982.01.T01:intron 40.0%
TCGAGTAACACATTTCCCAA+AGG + Chr5:89898826-89898845 MsG0580028982.01.T01:intron 40.0%
TCTATACACTTTACAGGCGA+AGG + Chr5:89898721-89898740 MsG0580028982.01.T01:intron 40.0%
TGGCTGAATTTAACTGAACC+AGG - Chr5:89896454-89896473 None:intergenic 40.0%
TGGTAGAAAATAGGCTTAGG+TGG + Chr5:89901429-89901448 MsG0580028982.01.T01:intron 40.0%
TGTTCTATGGCTCTTCAATG+TGG + Chr5:89896394-89896413 MsG0580028982.01.T01:exon 40.0%
TTAGGAGGAGAATGAGATGA+AGG - Chr5:89896502-89896521 None:intergenic 40.0%
TTCCGTAAAACTGTAGAGCA+GGG - Chr5:89899536-89899555 None:intergenic 40.0%
TTCTTTCTGCTTCACAAGTG+TGG + Chr5:89896417-89896436 MsG0580028982.01.T01:CDS 40.0%
TTGTTGGATTACAGTTTCGG+AGG - Chr5:89896282-89896301 None:intergenic 40.0%
TTTGGGTGATATGGTGTAGT+AGG + Chr5:89897854-89897873 MsG0580028982.01.T01:intron 40.0%
TTTGTTACCCTAAGGAGTGA+TGG + Chr5:89900605-89900624 MsG0580028982.01.T01:CDS 40.0%
! AACAACTCACCCCTTTCTTT+TGG + Chr5:89900152-89900171 MsG0580028982.01.T01:intron 40.0%
! AATTTGGGATGGTGCTTGAA+GGG + Chr5:89897470-89897489 MsG0580028982.01.T01:intron 40.0%
! ACAAGGAGTAGTTTGAGGTT+TGG - Chr5:89901260-89901279 None:intergenic 40.0%
! AGGCACGAAATTTGTTCTAG+AGG + Chr5:89899669-89899688 MsG0580028982.01.T01:intron 40.0%
! AGTTAGTCCTTTGGAGGAAA+AGG + Chr5:89897495-89897514 MsG0580028982.01.T01:intron 40.0%
! ATTGACTTAACGGGTCATGT+TGG - Chr5:89899048-89899067 None:intergenic 40.0%
! CATTCAAATGTAATGGGGCA+CGG + Chr5:89898020-89898039 MsG0580028982.01.T01:intron 40.0%
! CATTTGTTGCAACTAAGTGG+AGG + Chr5:89897431-89897450 MsG0580028982.01.T01:intron 40.0%
! CCAAGTCTAGTTCATCTTCT+TGG - Chr5:89900679-89900698 None:intergenic 40.0%
! CCTTAGCATTTGTTACCCTA+AGG + Chr5:89900597-89900616 MsG0580028982.01.T01:CDS 40.0%
! CTAAGGTGGTAGCATTTTCT+TGG + Chr5:89897551-89897570 MsG0580028982.01.T01:intron 40.0%
! GATTTTGTCCCAACTGTTAG+TGG + Chr5:89898560-89898579 MsG0580028982.01.T01:CDS 40.0%
! TGATGCACCGGCATTTAAAA+AGG + Chr5:89898595-89898614 MsG0580028982.01.T01:CDS 40.0%
!! AGTTGTTTTCGTAAGCTAGC+TGG + Chr5:89896963-89896982 MsG0580028982.01.T01:intron 40.0%
!! ATTTGTTCTAGAGGCGAACA+AGG + Chr5:89899678-89899697 MsG0580028982.01.T01:intron 40.0%
!! CCTTTGGAGGAAAAGGTATT+CGG + Chr5:89897502-89897521 MsG0580028982.01.T01:intron 40.0%
!! CTTTGGAGGAAAAGGTATTC+GGG + Chr5:89897503-89897522 MsG0580028982.01.T01:intron 40.0%
!! GCATTCAGAGATGGGTTAAT+AGG + Chr5:89899782-89899801 MsG0580028982.01.T01:intron 40.0%
!! GGCATGGTCTTATGCTTATT+TGG + Chr5:89897821-89897840 MsG0580028982.01.T01:intron 40.0%
!! GGTGTTTATGTTTTGCTGTC+GGG + Chr5:89898045-89898064 MsG0580028982.01.T01:intron 40.0%
!! TGTCTATTTCTAACAGAGGC+TGG - Chr5:89899012-89899031 None:intergenic 40.0%
!! TTTTTGTTTGGCCTACTAGG+GGG + Chr5:89899950-89899969 MsG0580028982.01.T01:intron 40.0%
!!! CAGGGTGTTTTGTTTTTTGG+TGG + Chr5:89898214-89898233 MsG0580028982.01.T01:intron 40.0%
!!! GGTTTTTTGTTTGGCCTACT+AGG + Chr5:89899947-89899966 MsG0580028982.01.T01:intron 40.0%
!!! TTTTGATTTACCCCCCTAGT+AGG - Chr5:89899964-89899983 None:intergenic 40.0%
AAAATCACCCTCCACACCTT+TGG - Chr5:89897717-89897736 None:intergenic 45.0%
AAACCTCCATCGTCAAAGTC+TGG + Chr5:89897271-89897290 MsG0580028982.01.T01:intron 45.0%
AAACTTTACAGGGGGGAAAC+CGG - Chr5:89899836-89899855 None:intergenic 45.0%
AAATGGGAGCCCTGAAACAA+AGG + Chr5:89898499-89898518 MsG0580028982.01.T01:CDS 45.0%
AAGCCGATGAACCTCCTAAT+CGG - Chr5:89898661-89898680 None:intergenic 45.0%
AAGGGGTTCTCTCATCTAAG+AGG - Chr5:89897297-89897316 None:intergenic 45.0%
AATACCAGCATTGCCCACAA+AGG + Chr5:89902751-89902770 MsG0580028982.01.T01:CDS 45.0%
ACATTGCCGAGTCATACCAA+AGG + Chr5:89897698-89897717 MsG0580028982.01.T01:intron 45.0%
ACCAAGCAATACCCTTCCTT+TGG - Chr5:89898845-89898864 None:intergenic 45.0%
ACCCACCACTAGTAGTGAAA+TGG - Chr5:89898298-89898317 None:intergenic 45.0%
ACGAAGAGTAGATCAGAGGT+AGG + Chr5:89901497-89901516 MsG0580028982.01.T01:intron 45.0%
ACTTGCACATAGGGCTCATT+TGG + Chr5:89902140-89902159 MsG0580028982.01.T01:intron 45.0%
AGTCGTATGGCATTCAGAGA+TGG + Chr5:89899773-89899792 MsG0580028982.01.T01:intron 45.0%
AGTGAAATGGCGAGCAAAGA+AGG - Chr5:89898285-89898304 None:intergenic 45.0%
ATCCCGATTAGGAGGTTCAT+CGG + Chr5:89898655-89898674 MsG0580028982.01.T01:CDS 45.0%
ATCTACACGACAGCATCTAC+AGG - Chr5:89901469-89901488 None:intergenic 45.0%
ATGCCTACAGCAACATTAGC+AGG - Chr5:89898635-89898654 None:intergenic 45.0%
ATTTCTAACAGAGGCTGGCA+TGG - Chr5:89899007-89899026 None:intergenic 45.0%
CATAAAGGAAGCCTCAGGTT+AGG - Chr5:89900946-89900965 None:intergenic 45.0%
CCAAGCAATACCCTTCCTTT+GGG - Chr5:89898844-89898863 None:intergenic 45.0%
CCCCTTGCTTATTCTATGAG+TGG + Chr5:89897977-89897996 MsG0580028982.01.T01:intron 45.0%
CGGGTATTTATGGAAGAGTC+CGG + Chr5:89897522-89897541 MsG0580028982.01.T01:intron 45.0%
CGGTAACAAGGAGTAGTTTG+AGG - Chr5:89901265-89901284 None:intergenic 45.0%
CTAACCTGAGGCTTCCTTTA+TGG + Chr5:89900944-89900963 MsG0580028982.01.T01:CDS 45.0%
CTATCTGCAGAAGGCCATAA+AGG - Chr5:89900961-89900980 None:intergenic 45.0%
CTCAAGTTTGCGAATGCTTG+TGG + Chr5:89902701-89902720 MsG0580028982.01.T01:CDS 45.0%
GCATTTAAAAAGGCTCCAGG+TGG + Chr5:89898605-89898624 MsG0580028982.01.T01:CDS 45.0%
GCCATTTCACTACTAGTGGT+GGG + Chr5:89898294-89898313 MsG0580028982.01.T01:intron 45.0%
GCTGGAGAGCTTAAGGAATT+AGG + Chr5:89896981-89897000 MsG0580028982.01.T01:intron 45.0%
GGAGACTGCAGATATCATCA+AGG + Chr5:89901008-89901027 MsG0580028982.01.T01:CDS 45.0%
GTCGTATGGCATTCAGAGAT+GGG + Chr5:89899774-89899793 MsG0580028982.01.T01:intron 45.0%
GTCTTTACCCCCCTGTATAT+AGG - Chr5:89900050-89900069 None:intergenic 45.0%
GTGAAATGGCGAGCAAAGAA+GGG - Chr5:89898284-89898303 None:intergenic 45.0%
GTGAGTTTGAGTCTCCCTTA+AGG - Chr5:89896806-89896825 None:intergenic 45.0%
TAAGCTAGCTGGAGAGCTTA+AGG + Chr5:89896974-89896993 MsG0580028982.01.T01:intron 45.0%
TACAGTTTCGGAGGAAGCAA+AGG - Chr5:89896273-89896292 None:intergenic 45.0%
TACTTGGGCAGTTGGAATGT+TGG + Chr5:89897770-89897789 MsG0580028982.01.T01:intron 45.0%
TCCACACCTTTGGTATGACT+CGG - Chr5:89897707-89897726 None:intergenic 45.0%
TCGTACGAAGAGTAGATCAG+AGG + Chr5:89901493-89901512 MsG0580028982.01.T01:intron 45.0%
TCGTTCTCCATCACTCCTTA+GGG - Chr5:89900615-89900634 None:intergenic 45.0%
TCTCTAGCACTATCTGCAGA+AGG - Chr5:89900970-89900989 None:intergenic 45.0%
TCTGCAGATAGTGCTAGAGA+AGG + Chr5:89900970-89900989 MsG0580028982.01.T01:CDS 45.0%
TGAAACAAAGGAATCGCCTC+TGG + Chr5:89898511-89898530 MsG0580028982.01.T01:CDS 45.0%
TGAAGGGGAAGTTAGTCCTT+TGG + Chr5:89897486-89897505 MsG0580028982.01.T01:intron 45.0%
TGTCTTATGACCCTAACCTG+AGG + Chr5:89900932-89900951 MsG0580028982.01.T01:CDS 45.0%
TGTGGAGGAGAGTGATGTTA+TGG + Chr5:89897900-89897919 MsG0580028982.01.T01:intron 45.0%
TGTTATGGCCGAGGATATCA+AGG + Chr5:89897915-89897934 MsG0580028982.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr5:89901659-89901678 None:intergenic 45.0%
! AGAGGCGATTCCTTTGTTTC+AGG - Chr5:89898512-89898531 None:intergenic 45.0%
! AGTCATACCAAAGGTGTGGA+GGG + Chr5:89897707-89897726 MsG0580028982.01.T01:intron 45.0%
! ATTTGGGATGGTGCTTGAAG+GGG + Chr5:89897471-89897490 MsG0580028982.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr5:89901660-89901679 None:intergenic 45.0%
! CAATTTGGGATGGTGCTTGA+AGG + Chr5:89897469-89897488 MsG0580028982.01.T01:intron 45.0%
! CATACCCGAATTCTAAGAGG+TGG - Chr5:89899074-89899093 None:intergenic 45.0%
! CCGAAGCTTTAACAATGGGT+TGG - Chr5:89896474-89896493 None:intergenic 45.0%
! CCGAATACCTTTTCCTCCAA+AGG - Chr5:89897505-89897524 None:intergenic 45.0%
! CCTGGAGCCTTTTTAAATGC+CGG - Chr5:89898605-89898624 None:intergenic 45.0%
! CGTAGGTGTGACAACTGTTT+TGG + Chr5:89898171-89898190 MsG0580028982.01.T01:intron 45.0%
! GAGGCGATTCCTTTGTTTCA+GGG - Chr5:89898511-89898530 None:intergenic 45.0%
! GCAGGGCACTCCAATTTATA+AGG - Chr5:89899519-89899538 None:intergenic 45.0%
! GCAGTAGCTCGACTTTTGTT+AGG - Chr5:89897366-89897385 None:intergenic 45.0%
! GGAGTAGTTTGAGGTTTGGA+TGG - Chr5:89901256-89901275 None:intergenic 45.0%
! GGGATCTCTGAAGGGTTAAT+AGG - Chr5:89900072-89900091 None:intergenic 45.0%
! TGCCCTGCTCTACAGTTTTA+CGG + Chr5:89899531-89899550 MsG0580028982.01.T01:intron 45.0%
! TGGAGAAGCATATCAGCACT+GGG - Chr5:89900659-89900678 None:intergenic 45.0%
! TGTGGAGGGTGATTTTCGAT+TGG + Chr5:89897721-89897740 MsG0580028982.01.T01:intron 45.0%
! TTGGAGAAGCATATCAGCAC+TGG - Chr5:89900660-89900679 None:intergenic 45.0%
!! CAGGTTGGTGAGGATGAATT+CGG + Chr5:89900497-89900516 MsG0580028982.01.T01:intron 45.0%
!! CCCAATGAAGTATTGTGGAG+TGG - Chr5:89897222-89897241 None:intergenic 45.0%
!! CTTGTTCAGGGGTTTGGTTT+TGG + Chr5:89898080-89898099 MsG0580028982.01.T01:intron 45.0%
!! TCAAGGTATTGTCTTGGAGG+TGG + Chr5:89897932-89897951 MsG0580028982.01.T01:intron 45.0%
!! TTATGTTTTGCTGTCGGGAG+AGG + Chr5:89898050-89898069 MsG0580028982.01.T01:intron 45.0%
!! TTTTGTTTGGCCTACTAGGG+GGG + Chr5:89899951-89899970 MsG0580028982.01.T01:intron 45.0%
!!! GGAGGTTCATCGGCTTTTAT+TGG + Chr5:89898665-89898684 MsG0580028982.01.T01:CDS 45.0%
!!! TGTGACAACTGTTTTGGCCT+GGG + Chr5:89898177-89898196 MsG0580028982.01.T01:intron 45.0%
!! ATTATATAACTTAAAATATT+AGG - Chr5:89900275-89900294 None:intergenic 5.0%
!! TTATTATAAATAATAATACA+CGG + Chr5:89900207-89900226 MsG0580028982.01.T01:intron 5.0%
AACAAAGGAATCGCCTCTGG+TGG + Chr5:89898514-89898533 MsG0580028982.01.T01:CDS 50.0%
AAGAGGCCAGACTTTGACGA+TGG - Chr5:89897280-89897299 None:intergenic 50.0%
AAGGCCATAAAGGAAGCCTC+AGG - Chr5:89900951-89900970 None:intergenic 50.0%
ACTCATTTGCATTGGGTGGC+AGG - Chr5:89902051-89902070 None:intergenic 50.0%
AGCCGATGAACCTCCTAATC+GGG - Chr5:89898660-89898679 None:intergenic 50.0%
AGCTACTCATCAAACCGGCA+AGG - Chr5:89900235-89900254 None:intergenic 50.0%
AGGCTGCAGGTATTACACCA+AGG + Chr5:89901295-89901314 MsG0580028982.01.T01:CDS 50.0%
AGGGGAAGTTAGTCCTTTGG+AGG + Chr5:89897489-89897508 MsG0580028982.01.T01:intron 50.0%
AGTATTGTGGAGTGGACGTG+AGG - Chr5:89897214-89897233 None:intergenic 50.0%
AGTGTGGTTTCTAACCCTCC+TGG + Chr5:89896433-89896452 MsG0580028982.01.T01:CDS 50.0%
ATCACCAGGACTGAACCTGA+AGG + Chr5:89899649-89899668 MsG0580028982.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr5:89901658-89901677 MsG0580028982.01.T01:intron 50.0%
CCGGCATTTAAAAAGGCTCC+AGG + Chr5:89898602-89898621 MsG0580028982.01.T01:CDS 50.0%
CCTTTCTTTGGCTGATGCAC+CGG + Chr5:89898583-89898602 MsG0580028982.01.T01:CDS 50.0%
CGCCATTTCACTACTAGTGG+TGG + Chr5:89898293-89898312 MsG0580028982.01.T01:intron 50.0%
CTCGTTCTCCATCACTCCTT+AGG - Chr5:89900616-89900635 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr5:89901655-89901674 None:intergenic 50.0%
CTTCTGCACCTTCGGTAACA+AGG - Chr5:89901277-89901296 None:intergenic 50.0%
GCAAAGGCTGCAAAAGAAGC+TGG + Chr5:89900901-89900920 MsG0580028982.01.T01:CDS 50.0%
GCTCCTGCTAATGTTGCTGT+AGG + Chr5:89898629-89898648 MsG0580028982.01.T01:CDS 50.0%
GCTCGCCATTTCACTACTAG+TGG + Chr5:89898290-89898309 MsG0580028982.01.T01:intron 50.0%
GCTGTAGGCATATCCCGATT+AGG + Chr5:89898644-89898663 MsG0580028982.01.T01:CDS 50.0%
GGTCGTCAACTCTCAAACAG+TGG - Chr5:89897193-89897212 None:intergenic 50.0%
GGTTCAGTCCTGGTGATCTA+AGG - Chr5:89899646-89899665 None:intergenic 50.0%
GTAGGCATATCCCGATTAGG+AGG + Chr5:89898647-89898666 MsG0580028982.01.T01:CDS 50.0%
GTTGGAATGTTGGAGAGGAG+AGG + Chr5:89897780-89897799 MsG0580028982.01.T01:intron 50.0%
GTTTCCTTTGTGGGCAATGC+TGG - Chr5:89902758-89902777 None:intergenic 50.0%
TCACCAAGTGACTGCTTAGG+TGG - Chr5:89899223-89899242 None:intergenic 50.0%
TCTCCGAAACAAACCACCAG+AGG - Chr5:89898530-89898549 None:intergenic 50.0%
TGCACATAGGGCTCATTTGG+AGG + Chr5:89902143-89902162 MsG0580028982.01.T01:intron 50.0%
! CAAATGTAATGGGGCACGGA+AGG + Chr5:89898024-89898043 MsG0580028982.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr5:89901661-89901680 None:intergenic 50.0%
! CTTGTTACCGAAGGTGCAGA+AGG + Chr5:89901275-89901294 MsG0580028982.01.T01:CDS 50.0%
! GAGTCATACCAAAGGTGTGG+AGG + Chr5:89897706-89897725 MsG0580028982.01.T01:intron 50.0%
! GGAGAAGCATATCAGCACTG+GGG - Chr5:89900658-89900677 None:intergenic 50.0%
! GTTTCAGGGCTCCCATTTTC+AGG - Chr5:89898497-89898516 None:intergenic 50.0%
!! AGAGGTGCAGGTCTTGTTCA+GGG + Chr5:89898068-89898087 MsG0580028982.01.T01:intron 50.0%
!! CCCAAAGGAAGGGTATTGCT+TGG + Chr5:89898841-89898860 MsG0580028982.01.T01:intron 50.0%
!! GATACGTGTGCCGATTTGCA+TGG - Chr5:89900877-89900896 None:intergenic 50.0%
!! GCAACATGTACAGGTTGGTG+AGG + Chr5:89900487-89900506 MsG0580028982.01.T01:intron 50.0%
!! GCATTGACTGTGACTGAGAG+AGG + Chr5:89902725-89902744 MsG0580028982.01.T01:CDS 50.0%
!! TCGCCTCTGGTGGTTTGTTT+CGG + Chr5:89898524-89898543 MsG0580028982.01.T01:CDS 50.0%
!!! GGTTTGGTTTTGGTGTCCCT+TGG + Chr5:89898090-89898109 MsG0580028982.01.T01:intron 50.0%
!!! GTGTGACAACTGTTTTGGCC+TGG + Chr5:89898176-89898195 MsG0580028982.01.T01:intron 50.0%
!!! GTTTTTTGGTGGCAGCGTGT+GGG + Chr5:89898225-89898244 MsG0580028982.01.T01:intron 50.0%
!!! TGTTTTTTGGTGGCAGCGTG+TGG + Chr5:89898224-89898243 MsG0580028982.01.T01:intron 50.0%
ACACCAGCCAAGCATCTGCA+TGG + Chr5:89899192-89899211 MsG0580028982.01.T01:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr5:89901647-89901666 None:intergenic 55.0%
AGGCCAGACTTTGACGATGG+AGG - Chr5:89897277-89897296 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr5:89901646-89901665 MsG0580028982.01.T01:intron 55.0%
CAGGGTCAAAACGCATCCCT+TGG - Chr5:89900565-89900584 None:intergenic 55.0%
CCAAGTGACTGCTTAGGTGG+TGG - Chr5:89899220-89899239 None:intergenic 55.0%
CCACCACCTAAGCAGTCACT+TGG + Chr5:89899217-89899236 MsG0580028982.01.T01:intron 55.0%
CCGGTGCATCAGCCAAAGAA+AGG - Chr5:89898586-89898605 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr5:89901653-89901672 MsG0580028982.01.T01:intron 55.0%
CGGTCACCAAGTGACTGCTT+AGG - Chr5:89899226-89899245 None:intergenic 55.0%
GAAGAGTCCGGCTCCATCTA+AGG + Chr5:89897534-89897553 MsG0580028982.01.T01:intron 55.0%
GAATTCAGCGGTAGAGTGGC+GGG + Chr5:89901762-89901781 MsG0580028982.01.T01:CDS 55.0%
GCAGGAATTCAGCGGTAGAG+TGG + Chr5:89901758-89901777 MsG0580028982.01.T01:intron 55.0%
GCCGAGTCATACCAAAGGTG+TGG + Chr5:89897703-89897722 MsG0580028982.01.T01:intron 55.0%
GCTACCACCTTAGATGGAGC+CGG - Chr5:89897544-89897563 None:intergenic 55.0%
GGAATTCAGCGGTAGAGTGG+CGG + Chr5:89901761-89901780 MsG0580028982.01.T01:intron 55.0%
GGAGAGTGATGTTATGGCCG+AGG + Chr5:89897906-89897925 MsG0580028982.01.T01:intron 55.0%
GGCACACGTATCTGCAGCAA+AGG + Chr5:89900885-89900904 MsG0580028982.01.T01:CDS 55.0%
GGGCAGTTGGAATGTTGGAG+AGG + Chr5:89897775-89897794 MsG0580028982.01.T01:intron 55.0%
GTGGATGCAGTTGACACCAC+TGG + Chr5:89901792-89901811 MsG0580028982.01.T01:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr5:89901647-89901666 MsG0580028982.01.T01:intron 55.0%
! CTATGAGTGGTGTTGGGACC+CGG + Chr5:89897990-89898009 MsG0580028982.01.T01:intron 55.0%
! TAGAGTGGCGGGAATGAAGG+TGG + Chr5:89901773-89901792 MsG0580028982.01.T01:CDS 55.0%
! TATGAGTGGTGTTGGGACCC+GGG + Chr5:89897991-89898010 MsG0580028982.01.T01:intron 55.0%
!! AAAAGCGTCACCAGCACCAG+TGG - Chr5:89901811-89901830 None:intergenic 55.0%
!! ACATTAGCAGGAGCACCACC+TGG - Chr5:89898623-89898642 None:intergenic 55.0%
!! CAAGGGATGCGTTTTGACCC+TGG + Chr5:89900563-89900582 MsG0580028982.01.T01:CDS 55.0%
!! GAGAGGTGCAGGTCTTGTTC+AGG + Chr5:89898067-89898086 MsG0580028982.01.T01:intron 55.0%
!! GAGGTGCAGGTCTTGTTCAG+GGG + Chr5:89898069-89898088 MsG0580028982.01.T01:intron 55.0%
!! GCAGGTCTTGTTCAGGGGTT+TGG + Chr5:89898074-89898093 MsG0580028982.01.T01:intron 55.0%
!!! TGGTGCTGGTGACGCTTTTG+TGG + Chr5:89901812-89901831 MsG0580028982.01.T01:CDS 55.0%
CCTGCAGCCTTCTGCACCTT+CGG - Chr5:89901285-89901304 None:intergenic 60.0%
CTAAGGCGGTACGTGCACCA+GGG - Chr5:89900583-89900602 None:intergenic 60.0%
GAGTCCGGCTCCATCTAAGG+TGG + Chr5:89897537-89897556 MsG0580028982.01.T01:intron 60.0%
GCAGTTGACACCACTGGTGC+TGG + Chr5:89901798-89901817 MsG0580028982.01.T01:CDS 60.0%
GTGCCATGCAGATGCTTGGC+TGG - Chr5:89899198-89899217 None:intergenic 60.0%
! CGGTAGAGTGGCGGGAATGA+AGG + Chr5:89901770-89901789 MsG0580028982.01.T01:CDS 60.0%
! CGTGCCTTCAGGTTCAGTCC+TGG - Chr5:89899656-89899675 None:intergenic 60.0%
! TTTGCTGTCGGGAGAGGTGC+AGG + Chr5:89898056-89898075 MsG0580028982.01.T01:intron 60.0%
!! GCTGGTGACGCTTTTGTGGC+TGG + Chr5:89901816-89901835 MsG0580028982.01.T01:CDS 60.0%
!! GGTGGTGCCATGCAGATGCT+TGG - Chr5:89899202-89899221 None:intergenic 60.0%
GCTAAGGCGGTACGTGCACC+AGG - Chr5:89900584-89900603 None:intergenic 65.0%
TGGCAGCGTGTGGGTCGCTT+TGG + Chr5:89898234-89898253 MsG0580028982.01.T01:intron 65.0%
! CCGAAGGTGCAGAAGGCTGC+AGG + Chr5:89901282-89901301 MsG0580028982.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 89896199 89903012 89896199 ID=MsG0580028982.01;Name=MsG0580028982.01
Chr5 mRNA 89896199 89903012 89896199 ID=MsG0580028982.01.T01;Parent=MsG0580028982.01;Name=MsG0580028982.01.T01;_AED=0.40;_eAED=0.40;_QI=201|1|1|1|1|1|7|201|385
Chr5 exon 89896199 89896541 89896199 ID=MsG0580028982.01.T01:exon:26026;Parent=MsG0580028982.01.T01
Chr5 exon 89898477 89898691 89898477 ID=MsG0580028982.01.T01:exon:26027;Parent=MsG0580028982.01.T01
Chr5 exon 89900500 89900712 89900500 ID=MsG0580028982.01.T01:exon:26028;Parent=MsG0580028982.01.T01
Chr5 exon 89900832 89901029 89900832 ID=MsG0580028982.01.T01:exon:26029;Parent=MsG0580028982.01.T01
Chr5 exon 89901179 89901316 89901179 ID=MsG0580028982.01.T01:exon:26030;Parent=MsG0580028982.01.T01
Chr5 exon 89901762 89901878 89901762 ID=MsG0580028982.01.T01:exon:26031;Parent=MsG0580028982.01.T01
Chr5 exon 89902677 89903012 89902677 ID=MsG0580028982.01.T01:exon:26032;Parent=MsG0580028982.01.T01
Chr5 five_prime_UTR 89896199 89896399 89896199 ID=MsG0580028982.01.T01:five_prime_utr;Parent=MsG0580028982.01.T01
Chr5 CDS 89896400 89896541 89896400 ID=MsG0580028982.01.T01:cds;Parent=MsG0580028982.01.T01
Chr5 CDS 89898477 89898691 89898477 ID=MsG0580028982.01.T01:cds;Parent=MsG0580028982.01.T01
Chr5 CDS 89900500 89900712 89900500 ID=MsG0580028982.01.T01:cds;Parent=MsG0580028982.01.T01
Chr5 CDS 89900832 89901029 89900832 ID=MsG0580028982.01.T01:cds;Parent=MsG0580028982.01.T01
Chr5 CDS 89901179 89901316 89901179 ID=MsG0580028982.01.T01:cds;Parent=MsG0580028982.01.T01
Chr5 CDS 89901762 89901878 89901762 ID=MsG0580028982.01.T01:cds;Parent=MsG0580028982.01.T01
Chr5 CDS 89902677 89902811 89902677 ID=MsG0580028982.01.T01:cds;Parent=MsG0580028982.01.T01
Chr5 three_prime_UTR 89902812 89903012 89902812 ID=MsG0580028982.01.T01:three_prime_utr;Parent=MsG0580028982.01.T01
Gene Sequence

>MsG0580028982.01.T01

ATGGCTCTTCAATGTGGTTCTTTCTGCTTCACAAGTGTGGTTTCTAACCCTCCTGGTTCAGTTAAATTCAGCCAACCCATTGTTAAAGCTTCGGTTTTTCCTTCATCTCATTCTCCTCCTAATGTTCGGTTGAATTTTAAAGGAAAGACAAAGGCAATACCTGAAAATGGGAGCCCTGAAACAAAGGAATCGCCTCTGGTGGTTTGTTTCGGAGAAATGCTCATTGATTTTGTCCCAACTGTTAGTGGCCTTTCTTTGGCTGATGCACCGGCATTTAAAAAGGCTCCAGGTGGTGCTCCTGCTAATGTTGCTGTAGGCATATCCCGATTAGGAGGTTCATCGGCTTTTATTGGAAAGGTTGGTGAGGATGAATTCGGATATATGCTTGCAGATATACTCAAGGAAAATAATGTAAACAGCCAAGGGATGCGTTTTGACCCTGGTGCACGTACCGCCTTAGCATTTGTTACCCTAAGGAGTGATGGAGAACGAGAGTTCATGTTTTATCGTAACCCCAGTGCTGATATGCTTCTCCAAGAAGATGAACTAGACTTGGACTTAATCACAAAGGCCAAGATCTTTCATTATGGTTCGATAAGTCTTATAACAGAACCATGCAAATCGGCACACGTATCTGCAGCAAAGGCTGCAAAAGAAGCTGGTGTATTTCTGTCTTATGACCCTAACCTGAGGCTTCCTTTATGGCCTTCTGCAGATAGTGCTAGAGAAGGAATTCTGAGTATATGGGAGACTGCAGATATCATCAAGATTAGTGAAGAAGAGATTTCTTTTCTTACAAATGGTGAAGACCCATACAATGATGCTGTTGTTCGAAAACTTTTCCATCCAAACCTCAAACTACTCCTTGTTACCGAAGGTGCAGAAGGCTGCAGGTATTACACCAAGGAATTCAGCGGTAGAGTGGCGGGAATGAAGGTGGATGCAGTTGACACCACTGGTGCTGGTGACGCTTTTGTGGCTGGAATACTATCACAATTAGCTACGGATCTTTCATTACTTCAGAAAGAGGAACAATTGAGAGAATCTCTCAAGTTTGCGAATGCTTGTGGTGCATTGACTGTGACTGAGAGAGGTGCAATACCAGCATTGCCCACAAAGGAAACTGTTCTGAATGCCCTGCTTAAACCTGTATCATAA

Protein sequence

>MsG0580028982.01.T01

MALQCGSFCFTSVVSNPPGSVKFSQPIVKASVFPSSHSPPNVRLNFKGKTKAIPENGSPETKESPLVVCFGEMLIDFVPTVSGLSLADAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGEDEFGYMLADILKENNVNSQGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEDELDLDLITKAKIFHYGSISLITEPCKSAHVSAAKAAKEAGVFLSYDPNLRLPLWPSADSAREGILSIWETADIIKISEEEISFLTNGEDPYNDAVVRKLFHPNLKLLLVTEGAEGCRYYTKEFSGRVAGMKVDAVDTTGAGDAFVAGILSQLATDLSLLQKEEQLRESLKFANACGALTVTERGAIPALPTKETVLNALLKPVS*