Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004919.01.T01 | XP_003591578.1 | 93.256 | 430 | 29 | 0 | 1 | 430 | 35 | 464 | 0 | 841 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004919.01.T01 | D3J163 | 93.256 | 430 | 29 | 0 | 1 | 430 | 35 | 464 | 0 | 841 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004919.01.T01 | A0A2Z6MD82 | 82.299 | 435 | 71 | 3 | 1 | 430 | 35 | 468 | 0.0 | 749 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0180004919.01 | 0.836823 | 7.467771e-57 | 9.520587e-54 |
| MsG0080048301.01 | MsG0180004919.01 | 0.811870 | 5.638935e-51 | 3.530596e-48 |
| MsG0080048917.01 | MsG0180004919.01 | -0.845685 | 3.480258e-59 | 5.846693e-56 |
| MsG0080048978.01 | MsG0180004919.01 | -0.808757 | 2.648082e-50 | 1.526721e-47 |
| MsG0080049015.01 | MsG0180004919.01 | -0.818283 | 2.125133e-52 | 1.583896e-49 |
| MsG0080049066.01 | MsG0180004919.01 | -0.806571 | 7.709925e-50 | 4.198980e-47 |
| MsG0180000193.01 | MsG0180004919.01 | -0.810709 | 1.007433e-50 | 6.116932e-48 |
| MsG0180000194.01 | MsG0180004919.01 | -0.836198 | 1.077226e-56 | 1.348027e-53 |
| MsG0180000467.01 | MsG0180004919.01 | -0.800234 | 1.586021e-48 | 7.346669e-46 |
| MsG0180000762.01 | MsG0180004919.01 | 0.822875 | 1.874263e-53 | 1.588389e-50 |
| MsG0180000929.01 | MsG0180004919.01 | 0.809258 | 2.068142e-50 | 1.208472e-47 |
| MsG0180000979.01 | MsG0180004919.01 | 0.804042 | 2.611252e-49 | 1.332788e-46 |
| MsG0180001111.01 | MsG0180004919.01 | -0.816901 | 4.353582e-52 | 3.124225e-49 |
| MsG0180001264.01 | MsG0180004919.01 | 0.837258 | 5.779767e-57 | 7.465548e-54 |
| MsG0180001513.01 | MsG0180004919.01 | 0.805091 | 1.577768e-49 | 8.273177e-47 |
| MsG0180001533.01 | MsG0180004919.01 | 0.837770 | 4.272857e-57 | 5.608101e-54 |
| MsG0180001614.01 | MsG0180004919.01 | -0.812886 | 3.382542e-51 | 2.176190e-48 |
| MsG0180002006.01 | MsG0180004919.01 | 0.807756 | 4.325815e-50 | 2.429452e-47 |
| MsG0180002809.01 | MsG0180004919.01 | -0.804488 | 2.108730e-49 | 1.088636e-46 |
| MsG0180002935.01 | MsG0180004919.01 | 0.837182 | 6.044337e-57 | 7.789716e-54 |
| MsG0180003235.01 | MsG0180004919.01 | 0.805112 | 1.562414e-49 | 8.197016e-47 |
| MsG0180003296.01 | MsG0180004919.01 | -0.833505 | 5.132135e-56 | 5.921954e-53 |
| MsG0180003757.01 | MsG0180004919.01 | -0.818534 | 1.864670e-52 | 1.399483e-49 |
| MsG0180003759.01 | MsG0180004919.01 | -0.807939 | 3.955838e-50 | 2.232252e-47 |
| MsG0180003779.01 | MsG0180004919.01 | -0.818904 | 1.536742e-52 | 1.165292e-49 |
| MsG0180003904.01 | MsG0180004919.01 | -0.802528 | 5.374279e-49 | 2.638578e-46 |
| MsG0180003908.01 | MsG0180004919.01 | -0.838336 | 3.055049e-57 | 4.078987e-54 |
| MsG0180004177.01 | MsG0180004919.01 | -0.808647 | 2.794773e-50 | 1.606646e-47 |
| MsG0180004533.01 | MsG0180004919.01 | 0.812923 | 3.320783e-51 | 2.138458e-48 |
| MsG0180004777.01 | MsG0180004919.01 | 0.820495 | 6.656803e-53 | 5.275396e-50 |
| MsG0180004919.01 | MsG0180004957.01 | -0.805570 | 1.252397e-49 | 6.648221e-47 |
| MsG0180004919.01 | MsG0180005291.01 | -0.814132 | 1.800244e-51 | 1.197957e-48 |
| MsG0180004919.01 | MsG0180005353.01 | 0.809126 | 2.207702e-50 | 1.285493e-47 |
| MsG0180004919.01 | MsG0180006212.01 | -0.818667 | 1.739079e-52 | 1.309973e-49 |
| MsG0180004919.01 | MsG0280006442.01 | 0.826584 | 2.503488e-54 | 2.357457e-51 |
| MsG0180004919.01 | MsG0280006452.01 | -0.809819 | 1.566720e-50 | 9.292269e-48 |
| MsG0180004919.01 | MsG0280007426.01 | 0.824979 | 6.016680e-54 | 5.413270e-51 |
| MsG0180004919.01 | MsG0280007649.01 | -0.806273 | 8.912280e-50 | 4.817226e-47 |
| MsG0180004919.01 | MsG0280007650.01 | -0.801209 | 1.003243e-48 | 4.763462e-46 |
| MsG0180004919.01 | MsG0280007783.01 | -0.801230 | 9.930450e-49 | 4.717695e-46 |
| MsG0180004919.01 | MsG0280008405.01 | 0.839017 | 2.037913e-57 | 2.778004e-54 |
| MsG0180004919.01 | MsG0280008601.01 | 0.802976 | 4.344939e-49 | 2.157625e-46 |
| MsG0180004919.01 | MsG0280008913.01 | -0.824621 | 7.309803e-54 | 6.509919e-51 |
| MsG0180004919.01 | MsG0280009167.01 | 0.832450 | 9.385975e-56 | 1.049429e-52 |
| MsG0180004919.01 | MsG0280010149.01 | -0.816189 | 6.287245e-52 | 4.424924e-49 |
| MsG0180004919.01 | MsG0280010410.01 | 0.810017 | 1.420377e-50 | 8.468565e-48 |
| MsG0180004919.01 | MsG0280010704.01 | -0.835576 | 1.548715e-56 | 1.901590e-53 |
| MsG0180004919.01 | MsG0280010802.01 | 0.828048 | 1.116058e-54 | 1.096820e-51 |
| MsG0180004919.01 | MsG0280011200.01 | -0.815253 | 1.016415e-51 | 6.971735e-49 |
| MsG0180004919.01 | MsG0280011299.01 | -0.812080 | 5.074659e-51 | 3.195511e-48 |
| MsG0180004919.01 | MsG0280011301.01 | -0.810628 | 1.048679e-50 | 6.353480e-48 |
| MsG0180004919.01 | MsG0280011475.01 | -0.811822 | 5.776366e-51 | 3.612029e-48 |
| MsG0180004919.01 | MsG0380011635.01 | 0.849661 | 2.802795e-60 | 5.352116e-57 |
| MsG0180004919.01 | MsG0380011636.01 | 0.814103 | 1.826861e-51 | 1.214696e-48 |
| MsG0180004919.01 | MsG0380011974.01 | 0.809862 | 1.534067e-50 | 9.108615e-48 |
| MsG0180004919.01 | MsG0380012281.01 | -0.848359 | 6.445972e-60 | 1.179894e-56 |
| MsG0180004919.01 | MsG0380013272.01 | 0.843952 | 1.020907e-58 | 1.623347e-55 |
| MsG0180004919.01 | MsG0380013278.01 | 0.843612 | 1.259273e-58 | 1.981246e-55 |
| MsG0180004919.01 | MsG0380013378.01 | -0.803151 | 3.997832e-49 | 1.994241e-46 |
| MsG0180004919.01 | MsG0380013506.01 | -0.812136 | 4.935405e-51 | 3.112502e-48 |
| MsG0180004919.01 | MsG0380015070.01 | 0.803827 | 2.894817e-49 | 1.469341e-46 |
| MsG0180004919.01 | MsG0380015081.01 | -0.823842 | 1.113901e-53 | 9.701804e-51 |
| MsG0180004919.01 | MsG0380015111.01 | -0.845252 | 4.560864e-59 | 7.555402e-56 |
| MsG0180004919.01 | MsG0380015121.01 | -0.803530 | 3.336605e-49 | 1.680764e-46 |
| MsG0180004919.01 | MsG0380015130.01 | 0.837720 | 4.401115e-57 | 5.767332e-54 |
| MsG0180004919.01 | MsG0380015271.01 | -0.812914 | 3.335588e-51 | 2.147500e-48 |
| MsG0180004919.01 | MsG0380015629.01 | 0.803190 | 3.924151e-49 | 1.959467e-46 |
| MsG0180004919.01 | MsG0380015752.01 | -0.827211 | 1.772894e-54 | 1.700323e-51 |
| MsG0180004919.01 | MsG0380015971.01 | -0.804341 | 2.263246e-49 | 1.164022e-46 |
| MsG0180004919.01 | MsG0380016229.01 | -0.804114 | 2.523062e-49 | 1.290137e-46 |
| MsG0180004919.01 | MsG0380016261.01 | 0.825193 | 5.357897e-54 | 4.849876e-51 |
| MsG0180004919.01 | MsG0380016270.01 | 0.831032 | 2.100735e-55 | 2.252266e-52 |
| MsG0180004919.01 | MsG0380016362.01 | -0.831893 | 1.289516e-55 | 1.418557e-52 |
| MsG0180004919.01 | MsG0380016700.01 | 0.822612 | 2.158407e-53 | 1.815784e-50 |
| MsG0180004919.01 | MsG0380016790.01 | -0.810753 | 9.855585e-51 | 5.991093e-48 |
| MsG0180004919.01 | MsG0380016862.01 | 0.809810 | 1.573733e-50 | 9.331727e-48 |
| MsG0180004919.01 | MsG0380016896.01 | -0.846918 | 1.605903e-59 | 2.807071e-56 |
| MsG0180004919.01 | MsG0380016931.01 | -0.805522 | 1.281687e-49 | 6.795248e-47 |
| MsG0180004919.01 | MsG0380016960.01 | -0.813090 | 3.052429e-51 | 1.974427e-48 |
| MsG0180004919.01 | MsG0380017018.01 | -0.808710 | 2.709514e-50 | 1.560177e-47 |
| MsG0180004919.01 | MsG0380017141.01 | -0.818783 | 1.636877e-52 | 1.236988e-49 |
| MsG0180004919.01 | MsG0380017151.01 | 0.825400 | 4.786443e-54 | 4.357968e-51 |
| MsG0180004919.01 | MsG0380017214.01 | -0.800136 | 1.660704e-48 | 7.673492e-46 |
| MsG0180004919.01 | MsG0380017472.01 | -0.841575 | 4.371654e-58 | 6.451087e-55 |
| MsG0180004919.01 | MsG0380017474.01 | -0.840206 | 9.995388e-58 | 1.413684e-54 |
| MsG0180004919.01 | MsG0380017579.01 | 0.812385 | 4.354066e-51 | 2.764490e-48 |
| MsG0180004919.01 | MsG0380017690.01 | 0.832797 | 7.700744e-56 | 8.699647e-53 |
| MsG0180004919.01 | MsG0380017895.01 | -0.811956 | 5.402332e-51 | 3.390268e-48 |
| MsG0180004919.01 | MsG0380018026.01 | 0.807695 | 4.458412e-50 | 2.499793e-47 |
| MsG0180004919.01 | MsG0480018406.01 | 0.801783 | 7.649442e-49 | 3.685081e-46 |
| MsG0180004919.01 | MsG0480018440.01 | 0.826899 | 2.105746e-54 | 2.001182e-51 |
| MsG0180004919.01 | MsG0480018626.01 | -0.834281 | 3.282506e-56 | 3.877287e-53 |
| MsG0180004919.01 | MsG0480019017.01 | 0.818507 | 1.890595e-52 | 1.417883e-49 |
| MsG0180004919.01 | MsG0480019923.01 | 0.843282 | 1.541720e-58 | 2.400499e-55 |
| MsG0180004919.01 | MsG0480020958.01 | 0.823046 | 1.709781e-53 | 1.456092e-50 |
| MsG0180004919.01 | MsG0480022295.01 | -0.838273 | 3.171376e-57 | 4.225895e-54 |
| MsG0180004919.01 | MsG0480022311.01 | 0.821703 | 3.507494e-53 | 2.874907e-50 |
| MsG0180004919.01 | MsG0480022366.01 | -0.837948 | 3.844868e-57 | 5.073619e-54 |
| MsG0180004919.01 | MsG0480022638.01 | 0.868324 | 7.108324e-66 | 2.560474e-62 |
| MsG0180004919.01 | MsG0480022833.01 | 0.804905 | 1.726028e-49 | 9.008156e-47 |
| MsG0180004919.01 | MsG0480023067.01 | 0.809668 | 1.688447e-50 | 9.974562e-48 |
| MsG0180004919.01 | MsG0480023102.01 | 0.858963 | 5.739400e-63 | 1.491286e-59 |
| MsG0180004919.01 | MsG0480023187.01 | -0.806275 | 8.901396e-50 | 4.811638e-47 |
| MsG0180004919.01 | MsG0480023518.01 | 0.823754 | 1.168166e-53 | 1.014979e-50 |
| MsG0180004919.01 | MsG0480023558.01 | -0.814139 | 1.793683e-51 | 1.193835e-48 |
| MsG0180004919.01 | MsG0480023693.01 | 0.808660 | 2.776689e-50 | 1.596811e-47 |
| MsG0180004919.01 | MsG0580024054.01 | -0.813566 | 2.398504e-51 | 1.571792e-48 |
| MsG0180004919.01 | MsG0580024140.01 | -0.815143 | 1.075013e-51 | 7.351576e-49 |
| MsG0180004919.01 | MsG0580024309.01 | -0.808785 | 2.610591e-50 | 1.506214e-47 |
| MsG0180004919.01 | MsG0580024408.01 | 0.824251 | 8.933682e-54 | 7.870374e-51 |
| MsG0180004919.01 | MsG0580024571.01 | -0.830580 | 2.710386e-55 | 2.867325e-52 |
| MsG0180004919.01 | MsG0580024678.01 | -0.820029 | 8.512601e-53 | 6.660084e-50 |
| MsG0180004919.01 | MsG0580024990.01 | 0.804594 | 2.004026e-49 | 1.037445e-46 |
| MsG0180004919.01 | MsG0580025420.01 | 0.803370 | 3.600946e-49 | 1.806336e-46 |
| MsG0180004919.01 | MsG0580025440.01 | 0.806944 | 6.431155e-50 | 3.536329e-47 |
| MsG0180004919.01 | MsG0580025663.01 | -0.830294 | 3.183781e-55 | 3.340379e-52 |
| MsG0180004919.01 | MsG0580027638.01 | 0.820374 | 7.093598e-53 | 5.603227e-50 |
| MsG0180004919.01 | MsG0580028226.01 | -0.806803 | 6.888278e-50 | 3.773943e-47 |
| MsG0180004919.01 | MsG0580028982.01 | -0.843627 | 1.247301e-58 | 1.963382e-55 |
| MsG0180004919.01 | MsG0580029816.01 | -0.804691 | 1.913377e-49 | 9.930118e-47 |
| MsG0180004919.01 | MsG0580030145.01 | 0.830818 | 2.370882e-55 | 2.525977e-52 |
| MsG0180004919.01 | MsG0680030336.01 | 0.813545 | 2.424582e-51 | 1.588029e-48 |
| MsG0180004919.01 | MsG0680030635.01 | -0.818390 | 2.009752e-52 | 1.502460e-49 |
| MsG0180004919.01 | MsG0680031009.01 | 0.821060 | 4.934038e-53 | 3.972588e-50 |
| MsG0180004919.01 | MsG0680034229.01 | -0.804568 | 2.029895e-49 | 1.050098e-46 |
| MsG0180004919.01 | MsG0680034255.01 | 0.809652 | 1.702543e-50 | 1.005345e-47 |
| MsG0180004919.01 | MsG0680034316.01 | 0.830028 | 3.699015e-55 | 3.851143e-52 |
| MsG0180004919.01 | MsG0680034317.01 | 0.802300 | 5.989387e-49 | 2.923742e-46 |
| MsG0180004919.01 | MsG0680035841.01 | 0.814999 | 1.157474e-51 | 7.885083e-49 |
| MsG0180004919.01 | MsG0780036064.01 | -0.807247 | 5.547369e-50 | 3.074579e-47 |
| MsG0180004919.01 | MsG0780036507.01 | 0.807262 | 5.509347e-50 | 3.054619e-47 |
| MsG0180004919.01 | MsG0780036909.01 | -0.806916 | 6.518735e-50 | 3.581934e-47 |
| MsG0180004919.01 | MsG0780037917.01 | 0.810308 | 1.229411e-50 | 7.385240e-48 |
| MsG0180004919.01 | MsG0780037943.01 | 0.805660 | 1.199227e-49 | 6.380908e-47 |
| MsG0180004919.01 | MsG0780038860.01 | 0.811926 | 5.483624e-51 | 3.438351e-48 |
| MsG0180004919.01 | MsG0780038922.01 | 0.836377 | 9.700453e-57 | 1.220277e-53 |
| MsG0180004919.01 | MsG0780038923.01 | 0.815420 | 9.327794e-52 | 6.427979e-49 |
| MsG0180004919.01 | MsG0780039422.01 | -0.803994 | 2.671851e-49 | 1.362062e-46 |
| MsG0180004919.01 | MsG0780039576.01 | 0.809284 | 2.041426e-50 | 1.193712e-47 |
| MsG0180004919.01 | MsG0780039593.01 | 0.814047 | 1.879112e-51 | 1.247558e-48 |
| MsG0180004919.01 | MsG0780039883.01 | 0.800734 | 1.254224e-48 | 5.884003e-46 |
| MsG0180004919.01 | MsG0780039925.01 | 0.803178 | 3.946001e-49 | 1.969772e-46 |
| MsG0180004919.01 | MsG0780039968.01 | 0.832623 | 8.505219e-56 | 9.559056e-53 |
| MsG0180004919.01 | MsG0780040121.01 | -0.809531 | 1.807088e-50 | 1.063636e-47 |
| MsG0180004919.01 | MsG0780040352.01 | -0.823792 | 1.144597e-53 | 9.955329e-51 |
| MsG0180004919.01 | MsG0780040621.01 | 0.826251 | 3.005297e-54 | 2.803488e-51 |
| MsG0180004919.01 | MsG0780040804.01 | -0.824782 | 6.698473e-54 | 5.992709e-51 |
| MsG0180004919.01 | MsG0780040805.01 | 0.814694 | 1.352324e-51 | 9.136783e-49 |
| MsG0180004919.01 | MsG0780040806.01 | 0.825389 | 4.814452e-54 | 4.382103e-51 |
| MsG0180004919.01 | MsG0780040977.01 | 0.809194 | 2.134716e-50 | 1.245251e-47 |
| MsG0180004919.01 | MsG0780040991.01 | 0.808502 | 3.001880e-50 | 1.719295e-47 |
| MsG0180004919.01 | MsG0780041007.01 | -0.829334 | 5.457328e-55 | 5.569153e-52 |
| MsG0180004919.01 | MsG0780041106.01 | -0.824954 | 6.099165e-54 | 5.483542e-51 |
| MsG0180004919.01 | MsG0780041172.01 | 0.833739 | 4.485365e-56 | 5.212132e-53 |
| MsG0180004919.01 | MsG0780041173.01 | -0.830038 | 3.678411e-55 | 3.830759e-52 |
| MsG0180004919.01 | MsG0780041254.01 | -0.805136 | 1.543861e-49 | 8.104928e-47 |
| MsG0180004919.01 | MsG0780041620.01 | -0.814539 | 1.463616e-51 | 9.847569e-49 |
| MsG0180004919.01 | MsG0780041720.01 | -0.820167 | 7.913056e-53 | 6.214672e-50 |
| MsG0180004919.01 | MsG0780041783.01 | -0.811874 | 5.627924e-51 | 3.524052e-48 |
| MsG0180004919.01 | MsG0880041855.01 | -0.811119 | 8.209562e-51 | 5.039160e-48 |
| MsG0180004919.01 | MsG0880042500.01 | -0.832150 | 1.114144e-55 | 1.234622e-52 |
| MsG0180004919.01 | MsG0880042694.01 | 0.827209 | 1.775358e-54 | 1.702569e-51 |
| MsG0180004919.01 | MsG0880042740.01 | 0.807915 | 4.002901e-50 | 2.257306e-47 |
| MsG0180004919.01 | MsG0880043017.01 | 0.859974 | 2.853197e-63 | 7.675888e-60 |
| MsG0180004919.01 | MsG0880043364.01 | 0.835274 | 1.845570e-56 | 2.246026e-53 |
| MsG0180004919.01 | MsG0880044339.01 | -0.826512 | 2.604346e-54 | 2.447526e-51 |
| MsG0180004919.01 | MsG0880044352.01 | -0.823675 | 1.219305e-53 | 1.057015e-50 |
| MsG0180004919.01 | MsG0880044715.01 | -0.840861 | 6.736146e-58 | 9.722300e-55 |
| MsG0180004919.01 | MsG0880045188.01 | -0.814030 | 1.896018e-51 | 1.258218e-48 |
| MsG0180004919.01 | MsG0880045413.01 | -0.805277 | 1.442978e-49 | 7.602218e-47 |
| MsG0180004919.01 | MsG0880045458.01 | 0.830341 | 3.102206e-55 | 3.259278e-52 |
| MsG0180004919.01 | MsG0880045677.01 | 0.827009 | 1.981817e-54 | 1.889340e-51 |
| MsG0180004919.01 | MsG0880046040.01 | -0.801964 | 7.021903e-49 | 3.398232e-46 |
| MsG0180004919.01 | MsG0880046041.01 | -0.814336 | 1.622773e-51 | 1.085871e-48 |
| MsG0180004919.01 | MsG0880046429.01 | 0.831380 | 1.725086e-55 | 1.868825e-52 |
| MsG0180004919.01 | MsG0880046462.01 | -0.809425 | 1.904105e-50 | 1.117598e-47 |
| MsG0180004919.01 | MsG0880046863.01 | 0.832342 | 9.982903e-56 | 1.112520e-52 |
| MsG0180004919.01 | MsG0880046996.01 | 0.818394 | 2.005794e-52 | 1.499675e-49 |
| MsG0180004919.01 | MsG0880047318.01 | -0.827036 | 1.952716e-54 | 1.863075e-51 |
| MsG0180004919.01 | MsG0880047392.01 | -0.814286 | 1.664944e-51 | 1.112553e-48 |
| MsG0180004919.01 | MsG0880047493.01 | 0.802004 | 6.891777e-49 | 3.338742e-46 |
| MsG0180004919.01 | MsG0880047697.01 | 0.806358 | 8.549635e-50 | 4.630965e-47 |
| MsG0180004919.01 | MsG0880047714.01 | 0.800931 | 1.143358e-48 | 5.390974e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004919.01.T01 | MTR_1g089180 | 93.256 | 430 | 29 | 0 | 1 | 430 | 35 | 464 | 0.0 | 841 |
| MsG0180004919.01.T01 | MTR_6g027840 | 32.047 | 337 | 213 | 5 | 72 | 395 | 120 | 453 | 3.03e-46 | 167 |
| MsG0180004919.01.T01 | MTR_2g045090 | 86.567 | 67 | 9 | 0 | 149 | 215 | 9 | 75 | 4.88e-32 | 119 |
| MsG0180004919.01.T01 | MTR_5g043640 | 33.152 | 184 | 97 | 4 | 216 | 395 | 51 | 212 | 2.02e-19 | 87.4 |
| MsG0180004919.01.T01 | MTR_5g043640 | 30.208 | 192 | 111 | 3 | 186 | 376 | 57 | 226 | 2.28e-15 | 75.9 |
| MsG0180004919.01.T01 | MTR_5g043640 | 31.538 | 130 | 74 | 1 | 281 | 395 | 50 | 179 | 9.60e-13 | 68.2 |
| MsG0180004919.01.T01 | MTR_2g096190 | 26.761 | 284 | 170 | 10 | 127 | 395 | 34 | 294 | 2.54e-15 | 78.2 |
| MsG0180004919.01.T01 | MTR_4g062100 | 28.405 | 257 | 150 | 11 | 149 | 395 | 66 | 298 | 6.94e-15 | 77.0 |
| MsG0180004919.01.T01 | MTR_2g096760 | 31.250 | 224 | 137 | 8 | 177 | 395 | 7 | 218 | 1.07e-14 | 76.3 |
| MsG0180004919.01.T01 | MTR_1g112830 | 28.177 | 181 | 106 | 2 | 223 | 401 | 173 | 331 | 1.09e-14 | 76.6 |
| MsG0180004919.01.T01 | MTR_2g006870 | 28.205 | 195 | 120 | 3 | 194 | 368 | 501 | 695 | 3.44e-14 | 75.1 |
| MsG0180004919.01.T01 | MTR_0020s0130 | 28.378 | 222 | 129 | 7 | 200 | 395 | 27 | 244 | 6.82e-14 | 73.9 |
| MsG0180004919.01.T01 | MTR_4g129470 | 28.061 | 196 | 117 | 5 | 221 | 395 | 53 | 245 | 1.21e-13 | 73.2 |
| MsG0180004919.01.T01 | MTR_4g063830 | 28.384 | 229 | 149 | 5 | 172 | 395 | 1 | 219 | 1.36e-13 | 72.8 |
| MsG0180004919.01.T01 | MTR_4g116160 | 27.907 | 172 | 100 | 2 | 226 | 395 | 77 | 226 | 1.46e-13 | 72.8 |
| MsG0180004919.01.T01 | MTR_7g100430 | 28.512 | 242 | 135 | 7 | 179 | 410 | 119 | 332 | 1.52e-13 | 72.8 |
| MsG0180004919.01.T01 | MTR_4g116160 | 27.907 | 172 | 100 | 2 | 226 | 395 | 77 | 226 | 2.59e-13 | 72.4 |
| MsG0180004919.01.T01 | MTR_1g100797 | 28.500 | 200 | 116 | 5 | 221 | 395 | 47 | 244 | 2.59e-13 | 72.0 |
| MsG0180004919.01.T01 | MTR_7g117620 | 31.551 | 187 | 109 | 6 | 215 | 383 | 112 | 297 | 3.11e-12 | 68.9 |
| MsG0180004919.01.T01 | MTR_4g092760 | 29.808 | 208 | 108 | 5 | 234 | 424 | 72 | 258 | 3.19e-12 | 68.6 |
| MsG0180004919.01.T01 | MTR_4g021880 | 26.457 | 223 | 149 | 5 | 186 | 403 | 100 | 312 | 4.11e-12 | 68.2 |
| MsG0180004919.01.T01 | MTR_4g021880 | 28.378 | 222 | 118 | 7 | 187 | 391 | 136 | 333 | 4.20e-11 | 64.7 |
| MsG0180004919.01.T01 | MTR_4g021880 | 26.457 | 223 | 149 | 5 | 186 | 403 | 100 | 312 | 7.95e-12 | 67.4 |
| MsG0180004919.01.T01 | MTR_4g021880 | 28.378 | 222 | 118 | 7 | 187 | 391 | 136 | 333 | 2.77e-11 | 65.9 |
| MsG0180004919.01.T01 | MTR_3g088410 | 35.714 | 98 | 63 | 0 | 308 | 405 | 22 | 119 | 4.21e-11 | 61.2 |
| MsG0180004919.01.T01 | MTR_1g115575 | 30.189 | 212 | 122 | 7 | 180 | 387 | 128 | 317 | 8.31e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004919.01.T01 | AT2G03430 | 32.086 | 187 | 103 | 2 | 212 | 395 | 40 | 205 | 5.97e-18 | 83.2 |
| MsG0180004919.01.T01 | AT2G03430 | 28.571 | 231 | 114 | 5 | 146 | 376 | 40 | 219 | 1.09e-14 | 73.9 |
| MsG0180004919.01.T01 | AT5G60070 | 27.715 | 267 | 161 | 7 | 160 | 395 | 39 | 304 | 4.32e-17 | 84.0 |
| MsG0180004919.01.T01 | AT2G14255 | 30.114 | 176 | 102 | 3 | 226 | 401 | 65 | 219 | 1.85e-15 | 79.0 |
| MsG0180004919.01.T01 | AT2G14255 | 25.581 | 215 | 133 | 4 | 180 | 391 | 55 | 245 | 2.16e-14 | 75.5 |
| MsG0180004919.01.T01 | AT1G07710 | 28.516 | 256 | 151 | 9 | 149 | 395 | 62 | 294 | 1.56e-14 | 75.9 |
| MsG0180004919.01.T01 | AT1G07710 | 28.516 | 256 | 151 | 9 | 149 | 395 | 62 | 294 | 1.56e-14 | 75.9 |
| MsG0180004919.01.T01 | AT5G20350 | 30.000 | 170 | 99 | 2 | 226 | 395 | 72 | 221 | 2.22e-14 | 75.5 |
| MsG0180004919.01.T01 | AT5G57740 | 30.303 | 198 | 113 | 6 | 221 | 397 | 53 | 246 | 5.31e-14 | 74.3 |
| MsG0180004919.01.T01 | AT1G05640 | 30.743 | 296 | 169 | 13 | 133 | 395 | 89 | 381 | 8.35e-14 | 73.9 |
| MsG0180004919.01.T01 | AT3G04710 | 32.597 | 181 | 96 | 6 | 223 | 401 | 283 | 439 | 2.28e-13 | 72.4 |
| MsG0180004919.01.T01 | AT3G04710 | 32.597 | 181 | 96 | 6 | 223 | 401 | 59 | 215 | 3.46e-13 | 71.6 |
| MsG0180004919.01.T01 | AT3G04710 | 32.597 | 181 | 96 | 6 | 223 | 401 | 59 | 215 | 3.48e-13 | 71.6 |
| MsG0180004919.01.T01 | AT5G02620 | 28.571 | 245 | 132 | 8 | 160 | 387 | 24 | 242 | 4.05e-13 | 71.6 |
| MsG0180004919.01.T01 | AT5G02620 | 28.571 | 245 | 132 | 8 | 160 | 387 | 24 | 242 | 4.05e-13 | 71.6 |
| MsG0180004919.01.T01 | AT2G31820 | 28.571 | 238 | 148 | 9 | 184 | 400 | 152 | 388 | 6.65e-13 | 71.2 |
| MsG0180004919.01.T01 | AT2G28840 | 26.667 | 240 | 122 | 7 | 166 | 396 | 25 | 219 | 7.87e-13 | 70.5 |
| MsG0180004919.01.T01 | AT5G02620 | 26.710 | 307 | 182 | 12 | 127 | 415 | 24 | 305 | 1.33e-12 | 70.1 |
| MsG0180004919.01.T01 | AT5G02620 | 26.710 | 307 | 182 | 12 | 127 | 415 | 24 | 305 | 1.33e-12 | 70.1 |
| MsG0180004919.01.T01 | AT5G02620 | 26.710 | 307 | 182 | 12 | 127 | 415 | 24 | 305 | 1.33e-12 | 70.1 |
| MsG0180004919.01.T01 | AT5G07270 | 29.146 | 199 | 110 | 5 | 221 | 395 | 47 | 238 | 8.04e-12 | 67.4 |
| MsG0180004919.01.T01 | AT5G14230 | 27.778 | 306 | 186 | 11 | 119 | 395 | 303 | 602 | 1.31e-11 | 67.0 |
| MsG0180004919.01.T01 | AT5G14230 | 27.632 | 304 | 189 | 10 | 119 | 395 | 143 | 442 | 1.91e-11 | 66.6 |
| MsG0180004919.01.T01 | AT5G12320 | 31.731 | 104 | 71 | 0 | 302 | 405 | 7 | 110 | 3.05e-11 | 61.6 |
| MsG0180004919.01.T01 | AT2G26650 | 29.143 | 175 | 101 | 3 | 210 | 384 | 437 | 588 | 5.17e-11 | 65.1 |
| MsG0180004919.01.T01 | AT2G26650 | 28.000 | 175 | 103 | 2 | 210 | 384 | 542 | 693 | 5.60e-11 | 65.1 |
Find 87 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACAAAGGTGGTTGATTA+AGG | 0.254768 | 1:+84370767 | None:intergenic |
| CTGAAGCTTCTTGCAGCTAA+TGG | 0.286643 | 1:-84370376 | MsG0180004919.01.T01:CDS |
| ATCGTCTGTAGTGGCTTTAC+CGG | 0.321963 | 1:+84370702 | None:intergenic |
| CTTGTTCGGTGTACTACGTT+GGG | 0.351992 | 1:-84369984 | MsG0180004919.01.T01:CDS |
| TGGACATTTGCAAGTTGCTT+TGG | 0.352572 | 1:-84369735 | MsG0180004919.01.T01:CDS |
| TGAATCTTTCAGCGACGAAT+TGG | 0.365290 | 1:-84370272 | MsG0180004919.01.T01:CDS |
| CACGCGCTGAAGAAGTGTTT+AGG | 0.372386 | 1:-84369923 | MsG0180004919.01.T01:CDS |
| ATTCCGTTTGCAATCAGAAC+AGG | 0.381539 | 1:-84370412 | MsG0180004919.01.T01:CDS |
| TTGCATTGTGCTGCTGAAGC+TGG | 0.388322 | 1:-84369755 | MsG0180004919.01.T01:CDS |
| TGCAGTTATAACCGTCGTTT+TGG | 0.395549 | 1:-84370635 | MsG0180004919.01.T01:CDS |
| TGTTGGGTTTGTTGTTGTTA+AGG | 0.397778 | 1:+84370864 | None:intergenic |
| TCACTCGCTGCCACGTGAAC+TGG | 0.399901 | 1:+84370217 | None:intergenic |
| CGACGAATTGGATGTGAATT+CGG | 0.401629 | 1:-84370260 | MsG0180004919.01.T01:CDS |
| GAGTGGTGGGATTACTGATA+AGG | 0.420907 | 1:+84370822 | None:intergenic |
| TTGTTGATTGAAAAGGTTGT+TGG | 0.422808 | 1:+84370847 | None:intergenic |
| AGTGGTGGGATTACTGATAA+GGG | 0.424185 | 1:+84370823 | None:intergenic |
| ACGCGCTGAAGAAGTGTTTA+GGG | 0.432430 | 1:-84369922 | MsG0180004919.01.T01:CDS |
| CGGTAAAACAGCGTTTGAAA+TGG | 0.434802 | 1:-84370029 | MsG0180004919.01.T01:CDS |
| TGTTGATTGAAAAGGTTGTT+GGG | 0.435252 | 1:+84370848 | None:intergenic |
| AGTGGTCACACGCGCTTGTT+CGG | 0.442695 | 1:-84369998 | MsG0180004919.01.T01:CDS |
| GCTTTGGTCTTGATTGCTCA+TGG | 0.445930 | 1:-84369719 | MsG0180004919.01.T01:CDS |
| TTCCCTGTTCTGATTGCAAA+CGG | 0.458043 | 1:+84370409 | None:intergenic |
| CTACATTGGGCTTCATTCAA+AGG | 0.464048 | 1:-84369854 | MsG0180004919.01.T01:CDS |
| TAAGGGTTTGTTGATTGAAA+AGG | 0.465974 | 1:+84370840 | None:intergenic |
| TGAAACTCGCGGTTGAAAGC+GGG | 0.467803 | 1:-84370510 | MsG0180004919.01.T01:CDS |
| ATGAAACTCGCGGTTGAAAG+CGG | 0.472267 | 1:-84370511 | MsG0180004919.01.T01:CDS |
| TGGGTGGAGCCCACTACATT+GGG | 0.483776 | 1:-84369867 | MsG0180004919.01.T01:CDS |
| GCTTGTTCGGTGTACTACGT+TGG | 0.484776 | 1:-84369985 | MsG0180004919.01.T01:CDS |
| TTGAATGAAGCCCAATGTAG+TGG | 0.486452 | 1:+84369857 | None:intergenic |
| TACATTGGGCTTCATTCAAA+GGG | 0.487037 | 1:-84369853 | MsG0180004919.01.T01:CDS |
| GGCTTTACCGGTTGGTAACA+TGG | 0.487305 | 1:+84370714 | None:intergenic |
| CGTCGTCTCTTTAACAAACC+TGG | 0.511564 | 1:-84370676 | MsG0180004919.01.T01:CDS |
| TCTGTAGTGGCTTTACCGGT+TGG | 0.516796 | 1:+84370706 | None:intergenic |
| ATGGGTGGAGCCCACTACAT+TGG | 0.517641 | 1:-84369868 | MsG0180004919.01.T01:CDS |
| GTTGATAGTGTTGATGATGC+TGG | 0.521848 | 1:-84369788 | MsG0180004919.01.T01:CDS |
| TTTGCACGAAGCTGCAACAA+TGG | 0.526496 | 1:-84370323 | MsG0180004919.01.T01:CDS |
| TCACGGAAAACGTGGGGACC+AGG | 0.526974 | 1:+84370658 | None:intergenic |
| TGAATAGTAAAGATCAGAAT+GGG | 0.527705 | 1:-84369886 | MsG0180004919.01.T01:CDS |
| CGAACGGTGATGACGTCAGC+AGG | 0.533305 | 1:+84370742 | None:intergenic |
| CGAACCTCCATGTTACCAAC+CGG | 0.541438 | 1:-84370721 | MsG0180004919.01.T01:CDS |
| ACCGATCTTATCGCCGCCGG+TGG | 0.542266 | 1:-84370472 | MsG0180004919.01.T01:CDS |
| GTGAATAGTAAAGATCAGAA+TGG | 0.548627 | 1:-84369887 | MsG0180004919.01.T01:CDS |
| CTGAAGAAGTGTTTAGGGGA+AGG | 0.549284 | 1:-84369917 | MsG0180004919.01.T01:CDS |
| GAAGTGTTTAGGGGAAGGAG+CGG | 0.549288 | 1:-84369912 | MsG0180004919.01.T01:CDS |
| AAATACGCAAGAGAGATAAA+CGG | 0.561366 | 1:-84370049 | MsG0180004919.01.T01:CDS |
| TTCGACGCTGCATGATGAAG+TGG | 0.565036 | 1:+84370118 | None:intergenic |
| TCTAAAATTCACATCTCCAC+CGG | 0.573420 | 1:+84370456 | None:intergenic |
| TAACTGCATCACGGAAAACG+TGG | 0.574738 | 1:+84370650 | None:intergenic |
| GCTTCTACGAGCGGCGCGTG+TGG | 0.576712 | 1:-84369954 | MsG0180004919.01.T01:CDS |
| TCCACCGGCGGCGATAAGAT+CGG | 0.585692 | 1:+84370471 | None:intergenic |
| TTCCGTTTGCAATCAGAACA+GGG | 0.588096 | 1:-84370411 | MsG0180004919.01.T01:CDS |
| GGGCGACGCGCTTCTACGAG+CGG | 0.593989 | 1:-84369963 | MsG0180004919.01.T01:CDS |
| ATGTTGATGAAGAGAGTGGT+GGG | 0.599092 | 1:+84370809 | None:intergenic |
| TTTGAAATGGCATCGGAGAG+TGG | 0.600076 | 1:-84370016 | MsG0180004919.01.T01:CDS |
| TTTGTTGGAACATGGTGCTG+AGG | 0.600880 | 1:-84369810 | MsG0180004919.01.T01:CDS |
| GTTCACGTGGCAGCGAGTGA+AGG | 0.604991 | 1:-84370214 | MsG0180004919.01.T01:CDS |
| TTGGTCTTGATTGCTCATGG+TGG | 0.608489 | 1:-84369716 | MsG0180004919.01.T01:CDS |
| TGAATGAAGCCCAATGTAGT+GGG | 0.611394 | 1:+84369858 | None:intergenic |
| GCTTCAGCAGCACAATGCAA+AGG | 0.613566 | 1:+84369758 | None:intergenic |
| GATAACAAACTCAGCGACGG+TGG | 0.615331 | 1:+84370606 | None:intergenic |
| AACAGCGTTTGAAATGGCAT+CGG | 0.618444 | 1:-84370023 | MsG0180004919.01.T01:CDS |
| AACTGCATCACGGAAAACGT+GGG | 0.618543 | 1:+84370651 | None:intergenic |
| TGGTAACATGGAGGTTCGAA+CGG | 0.618785 | 1:+84370726 | None:intergenic |
| TGTCCACTGTCGAGAATCAA+CGG | 0.619912 | 1:+84370141 | None:intergenic |
| GTCACCGATCTTATCGCCGC+CGG | 0.623931 | 1:-84370475 | MsG0180004919.01.T01:CDS |
| ACGTCAGCAGGTTCAGACAA+AGG | 0.630951 | 1:+84370754 | None:intergenic |
| ATGCAGAATCAACGATTCAG+TGG | 0.632543 | 1:-84370353 | MsG0180004919.01.T01:CDS |
| TTGTTCGGTGTACTACGTTG+GGG | 0.632711 | 1:-84369983 | MsG0180004919.01.T01:CDS |
| AGGGAGAATAAAGAGTGTCA+AGG | 0.637144 | 1:-84369834 | MsG0180004919.01.T01:CDS |
| CGCGCTGAAGAAGTGTTTAG+GGG | 0.639372 | 1:-84369921 | MsG0180004919.01.T01:CDS |
| ATAGTAAAGATCAGAATGGG+TGG | 0.645517 | 1:-84369883 | MsG0180004919.01.T01:CDS |
| ACGACGGAGATCGTCTGTAG+TGG | 0.650285 | 1:+84370693 | None:intergenic |
| TAAGGAAACTGCAACAGACA+TGG | 0.651639 | 1:+84370882 | None:intergenic |
| CAGGTTTGTTAAAGAGACGA+CGG | 0.657239 | 1:+84370677 | None:intergenic |
| AATGATGACACCAGTTCACG+TGG | 0.662960 | 1:-84370227 | MsG0180004919.01.T01:CDS |
| CACGAATTTGATGAAACTCG+CGG | 0.663191 | 1:-84370521 | MsG0180004919.01.T01:CDS |
| ATAACAAACTCAGCGACGGT+GGG | 0.664181 | 1:+84370607 | None:intergenic |
| AAAATTCACATCTCCACCGG+CGG | 0.675896 | 1:+84370459 | None:intergenic |
| TGAGATAACAAACTCAGCGA+CGG | 0.679630 | 1:+84370603 | None:intergenic |
| TATGTTGATGAAGAGAGTGG+TGG | 0.683276 | 1:+84370808 | None:intergenic |
| GTGTATGTTGATGAAGAGAG+TGG | 0.692828 | 1:+84370805 | None:intergenic |
| ACTGCATCACGGAAAACGTG+GGG | 0.694469 | 1:+84370652 | None:intergenic |
| CGACGGTTATAACTGCATCA+CGG | 0.697949 | 1:+84370641 | None:intergenic |
| ACGCCGTTGATTCTCGACAG+TGG | 0.699129 | 1:-84370144 | MsG0180004919.01.T01:CDS |
| TTTACCGGTTGGTAACATGG+AGG | 0.712639 | 1:+84370717 | None:intergenic |
| GGTGGGACCTACCAAAACGA+CGG | 0.719809 | 1:+84370624 | None:intergenic |
| TCAGCAGGTTCAGACAAAGG+TGG | 0.732780 | 1:+84370757 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGAATAGTAAAGATCAGAAT+GGG | - | Chr1:84370604-84370623 | MsG0180004919.01.T01:CDS | 25.0% |
| !! | ATTGAGTTTTTCGTTTCAAT+CGG | - | Chr1:84370312-84370331 | MsG0180004919.01.T01:CDS | 25.0% |
| !!! | AAGAGAAACATGTTTTTGAA+AGG | + | Chr1:84370847-84370866 | None:intergenic | 25.0% |
| !!! | GTGAATTTTAGAGATTCAAA+CGG | - | Chr1:84370045-84370064 | MsG0180004919.01.T01:CDS | 25.0% |
| AAATACGCAAGAGAGATAAA+CGG | - | Chr1:84370441-84370460 | MsG0180004919.01.T01:CDS | 30.0% | |
| GTCGAAAAATCATTTAGAAG+CGG | - | Chr1:84370389-84370408 | MsG0180004919.01.T01:CDS | 30.0% | |
| GTGAATAGTAAAGATCAGAA+TGG | - | Chr1:84370603-84370622 | MsG0180004919.01.T01:CDS | 30.0% | |
| ! | TCTTTTCACGAAAGCTATAT+CGG | - | Chr1:84369927-84369946 | MsG0180004919.01.T01:CDS | 30.0% |
| ! | TGTTGATTGAAAAGGTTGTT+GGG | + | Chr1:84369645-84369664 | None:intergenic | 30.0% |
| ! | TTGTTGATTGAAAAGGTTGT+TGG | + | Chr1:84369646-84369665 | None:intergenic | 30.0% |
| !! | TAAGGGTTTGTTGATTGAAA+AGG | + | Chr1:84369653-84369672 | None:intergenic | 30.0% |
| !! | TGTTTTTGAAAGGAAGCAAT+TGG | + | Chr1:84370837-84370856 | None:intergenic | 30.0% |
| ATAGTAAAGATCAGAATGGG+TGG | - | Chr1:84370607-84370626 | MsG0180004919.01.T01:CDS | 35.0% | |
| TACATTGGGCTTCATTCAAA+GGG | - | Chr1:84370637-84370656 | MsG0180004919.01.T01:CDS | 35.0% | |
| ! | TCTAAAATTCACATCTCCAC+CGG | + | Chr1:84370037-84370056 | None:intergenic | 35.0% |
| !! | TGTTGGGTTTGTTGTTGTTA+AGG | + | Chr1:84369629-84369648 | None:intergenic | 35.0% |
| !!! | AAAGAGTGTCAAGGTTTTGT+TGG | - | Chr1:84370665-84370684 | MsG0180004919.01.T01:CDS | 35.0% |
| ATGCAGAATCAACGATTCAG+TGG | - | Chr1:84370137-84370156 | MsG0180004919.01.T01:CDS | 40.0% | |
| ATTCCGTTTGCAATCAGAAC+AGG | - | Chr1:84370078-84370097 | MsG0180004919.01.T01:CDS | 40.0% | |
| CACGAATTTGATGAAACTCG+CGG | - | Chr1:84369969-84369988 | MsG0180004919.01.T01:CDS | 40.0% | |
| CAGACAAAGGTGGTTGATTA+AGG | + | Chr1:84369726-84369745 | None:intergenic | 40.0% | |
| CGACGAATTGGATGTGAATT+CGG | - | Chr1:84370230-84370249 | MsG0180004919.01.T01:CDS | 40.0% | |
| CGGTAAAACAGCGTTTGAAA+TGG | - | Chr1:84370461-84370480 | MsG0180004919.01.T01:CDS | 40.0% | |
| CTACATTGGGCTTCATTCAA+AGG | - | Chr1:84370636-84370655 | MsG0180004919.01.T01:CDS | 40.0% | |
| TGAATCTTTCAGCGACGAAT+TGG | - | Chr1:84370218-84370237 | MsG0180004919.01.T01:CDS | 40.0% | |
| TGAATGAAGCCCAATGTAGT+GGG | + | Chr1:84370635-84370654 | None:intergenic | 40.0% | |
| TGAGATAACAAACTCAGCGA+CGG | + | Chr1:84369890-84369909 | None:intergenic | 40.0% | |
| TGGACATTTGCAAGTTGCTT+TGG | - | Chr1:84370755-84370774 | MsG0180004919.01.T01:CDS | 40.0% | |
| TTCCCTGTTCTGATTGCAAA+CGG | + | Chr1:84370084-84370103 | None:intergenic | 40.0% | |
| TTCCGTTTGCAATCAGAACA+GGG | - | Chr1:84370079-84370098 | MsG0180004919.01.T01:CDS | 40.0% | |
| TTGAATGAAGCCCAATGTAG+TGG | + | Chr1:84370636-84370655 | None:intergenic | 40.0% | |
| ! | AACAGCGTTTGAAATGGCAT+CGG | - | Chr1:84370467-84370486 | MsG0180004919.01.T01:CDS | 40.0% |
| ! | AGTGGTGGGATTACTGATAA+GGG | + | Chr1:84369670-84369689 | None:intergenic | 40.0% |
| ! | ATGTTGATGAAGAGAGTGGT+GGG | + | Chr1:84369684-84369703 | None:intergenic | 40.0% |
| ! | CTCTCTTGCGTATTTTACGT+CGG | + | Chr1:84370436-84370455 | None:intergenic | 40.0% |
| ! | GAGTTTTTCGTTTCAATCGG+AGG | - | Chr1:84370315-84370334 | MsG0180004919.01.T01:CDS | 40.0% |
| ! | GTGTATGTTGATGAAGAGAG+TGG | + | Chr1:84369688-84369707 | None:intergenic | 40.0% |
| ! | TATGTTGATGAAGAGAGTGG+TGG | + | Chr1:84369685-84369704 | None:intergenic | 40.0% |
| ! | TGCAGTTATAACCGTCGTTT+TGG | - | Chr1:84369855-84369874 | MsG0180004919.01.T01:CDS | 40.0% |
| !! | AGGGAGAATAAAGAGTGTCA+AGG | - | Chr1:84370656-84370675 | MsG0180004919.01.T01:CDS | 40.0% |
| !! | CAGGTTTGTTAAAGAGACGA+CGG | + | Chr1:84369816-84369835 | None:intergenic | 40.0% |
| !! | GTTATAACCGTCGTTTTGGT+AGG | - | Chr1:84369859-84369878 | MsG0180004919.01.T01:CDS | 40.0% |
| !! | GTTGATAGTGTTGATGATGC+TGG | - | Chr1:84370702-84370721 | MsG0180004919.01.T01:CDS | 40.0% |
| !!! | GTCAAGGTTTTGTTGGAACA+TGG | - | Chr1:84370672-84370691 | MsG0180004919.01.T01:CDS | 40.0% |
| AAAATTCACATCTCCACCGG+CGG | + | Chr1:84370034-84370053 | None:intergenic | 45.0% | |
| AACTGCATCACGGAAAACGT+GGG | + | Chr1:84369842-84369861 | None:intergenic | 45.0% | |
| AATGATGACACCAGTTCACG+TGG | - | Chr1:84370263-84370282 | MsG0180004919.01.T01:CDS | 45.0% | |
| ATAACAAACTCAGCGACGGT+GGG | + | Chr1:84369886-84369905 | None:intergenic | 45.0% | |
| ATGAAACTCGCGGTTGAAAG+CGG | - | Chr1:84369979-84369998 | MsG0180004919.01.T01:CDS | 45.0% | |
| CGACGGTTATAACTGCATCA+CGG | + | Chr1:84369852-84369871 | None:intergenic | 45.0% | |
| CGTCGTCTCTTTAACAAACC+TGG | - | Chr1:84369814-84369833 | MsG0180004919.01.T01:CDS | 45.0% | |
| CTGAAGCTTCTTGCAGCTAA+TGG | - | Chr1:84370114-84370133 | MsG0180004919.01.T01:CDS | 45.0% | |
| TAACTGCATCACGGAAAACG+TGG | + | Chr1:84369843-84369862 | None:intergenic | 45.0% | |
| TGGTAACATGGAGGTTCGAA+CGG | + | Chr1:84369767-84369786 | None:intergenic | 45.0% | |
| TGTCCACTGTCGAGAATCAA+CGG | + | Chr1:84370352-84370371 | None:intergenic | 45.0% | |
| TTTGCACGAAGCTGCAACAA+TGG | - | Chr1:84370167-84370186 | MsG0180004919.01.T01:CDS | 45.0% | |
| ! | ATCGTCTGTAGTGGCTTTAC+CGG | + | Chr1:84369791-84369810 | None:intergenic | 45.0% |
| ! | GAGTGGTGGGATTACTGATA+AGG | + | Chr1:84369671-84369690 | None:intergenic | 45.0% |
| ! | TTTGAAATGGCATCGGAGAG+TGG | - | Chr1:84370474-84370493 | MsG0180004919.01.T01:CDS | 45.0% |
| ! | TTTGTTGGAACATGGTGCTG+AGG | - | Chr1:84370680-84370699 | MsG0180004919.01.T01:CDS | 45.0% |
| !! | ACGCGCTGAAGAAGTGTTTA+GGG | - | Chr1:84370568-84370587 | MsG0180004919.01.T01:CDS | 45.0% |
| !! | CTGAAGAAGTGTTTAGGGGA+AGG | - | Chr1:84370573-84370592 | MsG0180004919.01.T01:CDS | 45.0% |
| !! | CTTGTTCGGTGTACTACGTT+GGG | - | Chr1:84370506-84370525 | MsG0180004919.01.T01:CDS | 45.0% |
| !! | GCTTTGGTCTTGATTGCTCA+TGG | - | Chr1:84370771-84370790 | MsG0180004919.01.T01:CDS | 45.0% |
| !! | TTGGTCTTGATTGCTCATGG+TGG | - | Chr1:84370774-84370793 | MsG0180004919.01.T01:CDS | 45.0% |
| !! | TTGTTCGGTGTACTACGTTG+GGG | - | Chr1:84370507-84370526 | MsG0180004919.01.T01:CDS | 45.0% |
| !! | TTTACCGGTTGGTAACATGG+AGG | + | Chr1:84369776-84369795 | None:intergenic | 45.0% |
| ACGTCAGCAGGTTCAGACAA+AGG | + | Chr1:84369739-84369758 | None:intergenic | 50.0% | |
| ACTGCATCACGGAAAACGTG+GGG | + | Chr1:84369841-84369860 | None:intergenic | 50.0% | |
| CGAACCTCCATGTTACCAAC+CGG | - | Chr1:84369769-84369788 | MsG0180004919.01.T01:CDS | 50.0% | |
| GATAACAAACTCAGCGACGG+TGG | + | Chr1:84369887-84369906 | None:intergenic | 50.0% | |
| GCTTCAGCAGCACAATGCAA+AGG | + | Chr1:84370735-84370754 | None:intergenic | 50.0% | |
| TCAGCAGGTTCAGACAAAGG+TGG | + | Chr1:84369736-84369755 | None:intergenic | 50.0% | |
| TGAAACTCGCGGTTGAAAGC+GGG | - | Chr1:84369980-84369999 | MsG0180004919.01.T01:CDS | 50.0% | |
| TTCGACGCTGCATGATGAAG+TGG | + | Chr1:84370375-84370394 | None:intergenic | 50.0% | |
| ! | GAAGTGTTTAGGGGAAGGAG+CGG | - | Chr1:84370578-84370597 | MsG0180004919.01.T01:CDS | 50.0% |
| ! | TCTGTAGTGGCTTTACCGGT+TGG | + | Chr1:84369787-84369806 | None:intergenic | 50.0% |
| ! | TTGCATTGTGCTGCTGAAGC+TGG | - | Chr1:84370735-84370754 | MsG0180004919.01.T01:CDS | 50.0% |
| !! | CACGCGCTGAAGAAGTGTTT+AGG | - | Chr1:84370567-84370586 | MsG0180004919.01.T01:CDS | 50.0% |
| !! | CGCGCTGAAGAAGTGTTTAG+GGG | - | Chr1:84370569-84370588 | MsG0180004919.01.T01:CDS | 50.0% |
| !! | GCTTGTTCGGTGTACTACGT+TGG | - | Chr1:84370505-84370524 | MsG0180004919.01.T01:CDS | 50.0% |
| !! | GGCTTTACCGGTTGGTAACA+TGG | + | Chr1:84369779-84369798 | None:intergenic | 50.0% |
| ACGACGGAGATCGTCTGTAG+TGG | + | Chr1:84369800-84369819 | None:intergenic | 55.0% | |
| AGTGGTCACACGCGCTTGTT+CGG | - | Chr1:84370492-84370511 | MsG0180004919.01.T01:CDS | 55.0% | |
| ATGGGTGGAGCCCACTACAT+TGG | - | Chr1:84370622-84370641 | MsG0180004919.01.T01:CDS | 55.0% | |
| GGTGGGACCTACCAAAACGA+CGG | + | Chr1:84369869-84369888 | None:intergenic | 55.0% | |
| TGGGTGGAGCCCACTACATT+GGG | - | Chr1:84370623-84370642 | MsG0180004919.01.T01:CDS | 55.0% | |
| !! | ACGCCGTTGATTCTCGACAG+TGG | - | Chr1:84370346-84370365 | MsG0180004919.01.T01:CDS | 55.0% |
| GTCACCGATCTTATCGCCGC+CGG | - | Chr1:84370015-84370034 | MsG0180004919.01.T01:CDS | 60.0% | |
| GTTCACGTGGCAGCGAGTGA+AGG | - | Chr1:84370276-84370295 | MsG0180004919.01.T01:CDS | 60.0% | |
| TCACGGAAAACGTGGGGACC+AGG | + | Chr1:84369835-84369854 | None:intergenic | 60.0% | |
| TCACTCGCTGCCACGTGAAC+TGG | + | Chr1:84370276-84370295 | None:intergenic | 60.0% | |
| TCCACCGGCGGCGATAAGAT+CGG | + | Chr1:84370022-84370041 | None:intergenic | 60.0% | |
| ! | CGAACGGTGATGACGTCAGC+AGG | + | Chr1:84369751-84369770 | None:intergenic | 60.0% |
| ACCGATCTTATCGCCGCCGG+TGG | - | Chr1:84370018-84370037 | MsG0180004919.01.T01:CDS | 65.0% | |
| GCTTCTACGAGCGGCGCGTG+TGG | - | Chr1:84370536-84370555 | MsG0180004919.01.T01:CDS | 70.0% | |
| GGGCGACGCGCTTCTACGAG+CGG | - | Chr1:84370527-84370546 | MsG0180004919.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 84369610 | 84370902 | 84369610 | ID=MsG0180004919.01;Name=MsG0180004919.01 |
| Chr1 | mRNA | 84369610 | 84370902 | 84369610 | ID=MsG0180004919.01.T01;Parent=MsG0180004919.01;Name=MsG0180004919.01.T01;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|430 |
| Chr1 | exon | 84369610 | 84370902 | 84369610 | ID=MsG0180004919.01.T01:exon:27882;Parent=MsG0180004919.01.T01 |
| Chr1 | CDS | 84369610 | 84370902 | 84369610 | ID=MsG0180004919.01.T01:cds;Parent=MsG0180004919.01.T01 |
| Gene Sequence |
| Protein sequence |
