AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024725.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024725.01.T01 MTR_5g015300 95.345 623 14 4 1 622 1 609 0.0 1204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024725.01.T01 AT4G37670 65.147 614 179 10 15 614 18 610 0.0 786
MsG0580024725.01.T01 AT2G22910 68.519 540 154 4 78 614 75 601 0.0 755
MsG0580024725.01.T01 AT4G37670 63.853 545 162 10 15 545 18 541 0.0 671

Find 154 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGATAGTCCTTCTTCTT+TGG 0.243683 5:+8864332 MsG0580024725.01.T01:CDS
ACAGCTTGTGCCTTGGCAAT+TGG 0.248266 5:+8866061 MsG0580024725.01.T01:CDS
GATGAAGTGGTGAAGTTGAT+AGG 0.250695 5:-8864054 None:intergenic
ACAGTAATTCCACTCTTATT+TGG 0.256128 5:-8868641 None:intergenic
TCTCCTCAGGGTAAGGAAAA+AGG 0.290072 5:-8867684 None:intergenic
CAGCTTGTGCCTTGGCAATT+GGG 0.298414 5:+8866062 MsG0580024725.01.T01:CDS
ATCCACTTTGTTATTGTTCC+TGG 0.304270 5:+8864678 MsG0580024725.01.T01:CDS
GGTCCAATACTTGATGAAAA+TGG 0.316810 5:+8866112 MsG0580024725.01.T01:CDS
GACAACATTCTCAAAGATAA+AGG 0.329004 5:+8864717 MsG0580024725.01.T01:CDS
AGCGAGCAAGGCTTTGCTAT+TGG 0.336026 5:+8866376 MsG0580024725.01.T01:CDS
TTAAAATTGTTATGCTCAAC+AGG 0.336039 5:-8866250 None:intergenic
TGAAATATGTGCAGATTATA+TGG 0.338432 5:+8868271 MsG0580024725.01.T01:intron
CAAACAACTTATTCAGCCTT+TGG 0.343314 5:+8867447 MsG0580024725.01.T01:CDS
TAAAGGAGCGAGGTTTGAAT+TGG 0.357227 5:-8864119 None:intergenic
TTGGAATTGTTTACAAGAGA+TGG 0.378945 5:+8866824 MsG0580024725.01.T01:CDS
TTCGTTCCCTTCGTGAAGCT+TGG 0.379069 5:+8864253 MsG0580024725.01.T01:CDS
AGCTGCTATTTCACTTTGCT+CGG 0.382328 5:-8866191 None:intergenic
TTGTTGGATGGCACTATTAG+TGG 0.387463 5:+8866791 MsG0580024725.01.T01:CDS
GCAGTCAAATCTCCACCTAA+TGG 0.388073 5:+8866277 MsG0580024725.01.T01:CDS
TGCCCTTGGCCACGGCAATC+AGG 0.388955 5:-8867739 None:intergenic
GGAATTGATTATGGGTCAAC+TGG 0.390661 5:+8865637 MsG0580024725.01.T01:CDS
CATATAATACTTAGAATTGC+GGG 0.398277 5:-8868606 None:intergenic
TTTGAGAATGGAGATGGCTT+AGG 0.403018 5:+8866349 MsG0580024725.01.T01:CDS
TCGAGCTACAAGATTGTTAC+GGG 0.407532 5:-8868769 None:intergenic
TTTGGAGGCATGTGGCATAC+TGG 0.410523 5:+8867465 MsG0580024725.01.T01:CDS
TGATTGCCGTGGCCAAGGGC+AGG 0.426100 5:+8867741 MsG0580024725.01.T01:CDS
ATGACTAAGGTTTGAATTGT+GGG 0.427626 5:-8868884 None:intergenic
GCAATTTGTCTCCCTGCCCT+TGG 0.430775 5:-8867753 None:intergenic
ACCTCTGCACACTTCTCCTC+AGG 0.437888 5:-8867697 None:intergenic
GTGGTCGGTGGAATTGATTA+TGG 0.441744 5:+8865628 MsG0580024725.01.T01:CDS
GTTGGATAATTTCGTTGTTG+TGG 0.449871 5:+8867630 MsG0580024725.01.T01:CDS
TTCTTTCTCCAGCACCTATG+AGG 0.453361 5:+8866033 MsG0580024725.01.T01:intron
TCAATTTGCACATGGGTGCC+AGG 0.453790 5:-8864696 None:intergenic
ACAAGCTGTTGCAACCTCAT+AGG 0.454255 5:-8866047 None:intergenic
ATGTCTACGAATATTGCATA+TGG 0.454955 5:-8865410 None:intergenic
TTGTAGCTCGAATCTGTGTT+TGG 0.456577 5:+8868781 MsG0580024725.01.T01:three_prime_UTR
ATTCAATACTTCACCAGAGC+TGG 0.458082 5:-8865743 None:intergenic
GAACGTCTAAGTCGAATGAA+TGG 0.458588 5:+8866406 MsG0580024725.01.T01:CDS
GTGAAAGCGGTTGAGGAAGA+AGG 0.459644 5:+8866220 MsG0580024725.01.T01:CDS
GTGGTGAAGTTGATAGGGTT+TGG 0.465407 5:-8864048 None:intergenic
CGCATGCGTGAGAGACTTGA+TGG 0.466167 5:+8865685 MsG0580024725.01.T01:CDS
GAGAAGAAAGCAGCATCTCT+TGG 0.466675 5:+8868293 MsG0580024725.01.T01:CDS
GGTTCAAAGAGTTCACTTGT+TGG 0.467382 5:+8866775 MsG0580024725.01.T01:CDS
TTCGAGCTACAAGATTGTTA+CGG 0.468888 5:-8868770 None:intergenic
TCTCCTGATTGCCGTGGCCA+AGG 0.471147 5:+8867736 MsG0580024725.01.T01:CDS
TTGAGAATGGAGATGGCTTA+GGG 0.472572 5:+8866350 MsG0580024725.01.T01:CDS
TCGAATCTGTGTTTGGTACC+AGG 0.482437 5:+8868788 MsG0580024725.01.T01:three_prime_UTR
ATGAAGTGGTGAAGTTGATA+GGG 0.485825 5:-8864053 None:intergenic
GGAGCAAGGCTAAGTATGTT+GGG 0.485838 5:+8865290 MsG0580024725.01.T01:CDS
TAACTATGTGAAAGCGGTTG+AGG 0.486501 5:+8866213 MsG0580024725.01.T01:CDS
AAGAGTGGAATTACTGTTGG+TGG 0.488225 5:+8868647 MsG0580024725.01.T01:CDS
GAATGGGTACCTGTCAGAAT+TGG 0.488645 5:+8866423 MsG0580024725.01.T01:CDS
GGGAGCAAGGCTAAGTATGT+TGG 0.490609 5:+8865289 MsG0580024725.01.T01:intron
TGGTAACTTTCTTGCAGCCA+AGG 0.491225 5:+8865477 MsG0580024725.01.T01:CDS
AGCTTGTGCCTTGGCAATTG+GGG 0.494564 5:+8866063 MsG0580024725.01.T01:CDS
CAAGAGGCAAGAAACGAATC+AGG 0.494769 5:-8866138 None:intergenic
GCACACTTCTCCTCAGGGTA+AGG 0.495453 5:-8867691 None:intergenic
TTCTTTGGATCCCATTCTCA+AGG 0.495920 5:+8864347 MsG0580024725.01.T01:CDS
CATGACTAAGGTTTGAATTG+TGG 0.496054 5:-8868885 None:intergenic
AACGCTGCAATGTGTGCAGC+AGG 0.498191 5:+8865343 MsG0580024725.01.T01:CDS
AAGTTAATATGCGTTATAGA+TGG 0.498769 5:+8866091 MsG0580024725.01.T01:CDS
CAAAGAGTTCACTTGTTGGA+TGG 0.500446 5:+8866779 MsG0580024725.01.T01:CDS
ACAACTTATTCAGCCTTTGG+AGG 0.501598 5:+8867450 MsG0580024725.01.T01:CDS
CTCCTGATTGCCGTGGCCAA+GGG 0.501830 5:+8867737 MsG0580024725.01.T01:CDS
CTACGATAAGCGAGAAGATA+AGG 0.502922 5:-8864276 None:intergenic
AGTTGAGGAGTACAGTAGAT+TGG 0.505032 5:+8868909 MsG0580024725.01.T01:three_prime_UTR
AACATGTCTGCTTCTTCAAG+AGG 0.505053 5:-8866154 None:intergenic
ATTGTTTACAAGAGATGGGA+TGG 0.511266 5:+8866829 MsG0580024725.01.T01:CDS
TGTCTCCCTGCCCTTGGCCA+CGG 0.513144 5:-8867747 None:intergenic
TGCATGCCTTGCCTTGAGAA+TGG 0.515106 5:-8864358 None:intergenic
TTTGAATTGTGGGCAGGACA+AGG 0.516611 5:-8868874 None:intergenic
AACGTCTAAGTCGAATGAAT+GGG 0.522685 5:+8866407 MsG0580024725.01.T01:CDS
TGGAATTGTTTACAAGAGAT+GGG 0.523017 5:+8866825 MsG0580024725.01.T01:CDS
AACTTGGGCTACTCCAGCTC+TGG 0.523097 5:+8865730 MsG0580024725.01.T01:CDS
CTGCTGTACGTGTTGTAAGT+AGG 0.526017 5:-8868331 None:intergenic
GGATGGGAACAATGGTGGCT+AGG 0.526598 5:+8866846 MsG0580024725.01.T01:CDS
GGTAAGTGTGATTGGAAGCA+TGG 0.528087 5:+8868714 MsG0580024725.01.T01:three_prime_UTR
TTCGTTGTTGTGGAAAGAGA+AGG 0.528576 5:+8867640 MsG0580024725.01.T01:CDS
GAGCAAGGCTTTGCTATTGG+AGG 0.529772 5:+8866379 MsG0580024725.01.T01:CDS
TGGTCGGTGGAATTGATTAT+GGG 0.530856 5:+8865629 MsG0580024725.01.T01:CDS
AATTGGAGATTAAGTTGTTG+AGG 0.531209 5:-8864102 None:intergenic
GCATGCCTTGCCTTGAGAAT+GGG 0.531576 5:-8864357 None:intergenic
TGAAGTTGATAGGGTTTGGA+AGG 0.532697 5:-8864044 None:intergenic
GTATAGAGGCGCGATAAAGA+AGG 0.534931 5:-8864018 None:intergenic
CTGCAGCAGCCAATTCTGAC+AGG 0.535179 5:-8866432 None:intergenic
GATTGCCGTGGCCAAGGGCA+GGG 0.536027 5:+8867742 MsG0580024725.01.T01:CDS
CTTGACAGGTTTGTGAGGCG+TGG 0.536755 5:+8868524 MsG0580024725.01.T01:intron
AGAATGGGATCCAAAGAAGA+AGG 0.539945 5:-8864342 None:intergenic
CTAAGGTTTGAATTGTGGGC+AGG 0.541457 5:-8868880 None:intergenic
ATAGCAGCTAAACTTTCAGT+TGG 0.541876 5:+8865382 MsG0580024725.01.T01:CDS
GCAACTTTCCACAATGGTGT+TGG 0.543734 5:+8866325 MsG0580024725.01.T01:CDS
TCATATAATACTTAGAATTG+CGG 0.547939 5:-8868607 None:intergenic
TTTATAGCTGCTACAAACGT+TGG 0.550580 5:+8867612 MsG0580024725.01.T01:intron
CACAATTCAAACCTTAGTCA+TGG 0.553441 5:+8868886 MsG0580024725.01.T01:three_prime_UTR
GAGGATTGAAGTGAGAGTAT+TGG 0.555417 5:-8864083 None:intergenic
TGGATCCCATTCTCAAGGCA+AGG 0.559310 5:+8864352 MsG0580024725.01.T01:CDS
ACTCCTCAACTCCATGACTA+AGG 0.559553 5:-8868897 None:intergenic
GGCTTAGGGACTAGCGAGCA+AGG 0.560101 5:+8866364 MsG0580024725.01.T01:CDS
TTACAACACGTACAGCAGAT+TGG 0.561074 5:+8868336 MsG0580024725.01.T01:CDS
CAATAACAAAGTGGATTCCA+AGG 0.563812 5:-8864671 None:intergenic
GGGCAGGGAGACAAATTGCT+TGG 0.563989 5:+8867757 MsG0580024725.01.T01:CDS
GTGAACGGAATCACTGAAGA+AGG 0.566221 5:+8864210 MsG0580024725.01.T01:CDS
AGAAATGACGAGAACAAAAG+TGG 0.566415 5:-8864301 None:intergenic
ATGGAAAACGCATTACAGAA+TGG 0.566481 5:+8866296 MsG0580024725.01.T01:CDS
GGTTTGGAAGGGAAGTATAG+AGG 0.566532 5:-8864032 None:intergenic
AAACCTTAGTCATGGAGTTG+AGG 0.567702 5:+8868894 MsG0580024725.01.T01:three_prime_UTR
TTGTGCCTTGGCAATTGGGG+CGG 0.568264 5:+8866066 MsG0580024725.01.T01:CDS
AACTTCTTGACAGGTTTGTG+AGG 0.570293 5:+8868519 MsG0580024725.01.T01:intron
AGACATGTTAATTCGCAAGC+GGG 0.573614 5:+8866168 MsG0580024725.01.T01:CDS
GAATTGATTATGGGTCAACT+GGG 0.574055 5:+8865638 MsG0580024725.01.T01:CDS
GGTTAAGCGGTCTGATGAAG+AGG 0.575532 5:+8867486 MsG0580024725.01.T01:CDS
TTGAACAACGAAGGAGTGAA+CGG 0.576908 5:+8864195 MsG0580024725.01.T01:CDS
GTAAGTGTGATTGGAAGCAT+GGG 0.577212 5:+8868715 MsG0580024725.01.T01:three_prime_UTR
CAGAGAAGAGGGGTGGTCGG+TGG 0.577629 5:+8865616 MsG0580024725.01.T01:intron
AGCAGCTAACTATGTGAAAG+CGG 0.584271 5:+8866207 MsG0580024725.01.T01:CDS
AATAAGAGTGGAATTACTGT+TGG 0.587427 5:+8868644 MsG0580024725.01.T01:CDS
CTTGTCCGCCCCAATTGCCA+AGG 0.592760 5:-8866071 None:intergenic
TGACAGAGAAGAGGGGTGGT+CGG 0.595410 5:+8865613 MsG0580024725.01.T01:intron
TTGAATTGTGGGCAGGACAA+GGG 0.600713 5:-8868873 None:intergenic
ATTCAGCCTTTGGAGGCATG+TGG 0.604861 5:+8867457 MsG0580024725.01.T01:CDS
AACGAGGAATTAAAGGAGCG+AGG 0.605298 5:-8864129 None:intergenic
ATATGCAATATTCGTAGACA+TGG 0.605536 5:+8865412 MsG0580024725.01.T01:CDS
ACAACAGATTTACAATACAA+AGG 0.606913 5:-8868831 None:intergenic
GGTTGCAACAGCTTGTGCCT+TGG 0.608428 5:+8866054 MsG0580024725.01.T01:CDS
CTACGAATATTGCATATGGA+AGG 0.610959 5:-8865406 None:intergenic
AAGAGATGGGATGGGAACAA+TGG 0.612647 5:+8866838 MsG0580024725.01.T01:CDS
TTGTTTACAAGAGATGGGAT+GGG 0.612686 5:+8866830 MsG0580024725.01.T01:CDS
GTATTGGCGAGAAGATGAAG+TGG 0.613696 5:-8864067 None:intergenic
CGCAATGCGTTGAACAACGA+AGG 0.616719 5:+8864186 MsG0580024725.01.T01:CDS
TACTGCGTTTACAGGGAGCA+AGG 0.617201 5:+8865276 MsG0580024725.01.T01:intron
GAAGTTGATAGGGTTTGGAA+GGG 0.618757 5:-8864043 None:intergenic
TCTCAAAACCAACACCATTG+TGG 0.620130 5:-8866333 None:intergenic
AAGCTTCTACCAAATAAGAG+TGG 0.625840 5:+8868632 MsG0580024725.01.T01:CDS
AGATGGGATGGGAACAATGG+TGG 0.628080 5:+8866841 MsG0580024725.01.T01:CDS
GAATGTTGTCAATTTGCACA+TGG 0.630324 5:-8864704 None:intergenic
GATAAGGCCAAGCTTCACGA+AGG 0.630575 5:-8864260 None:intergenic
AGAGCTGGAGTAGCCCAAGT+TGG 0.630783 5:-8865728 None:intergenic
AGTATGCCACATGCCTCCAA+AGG 0.632526 5:-8867463 None:intergenic
CATGTGGCATACTGGTTAAG+CGG 0.633218 5:+8867473 MsG0580024725.01.T01:CDS
CAGACATGTTAATTCGCAAG+CGG 0.635149 5:+8866167 MsG0580024725.01.T01:CDS
GCAGTATCTCCTGATTGCCG+TGG 0.635516 5:+8867730 MsG0580024725.01.T01:CDS
GAAGGTCAAATAATTGCATG+TGG 0.638311 5:+8867658 MsG0580024725.01.T01:CDS
AATGCTACATGTCGAAGACC+TGG 0.640649 5:-8868806 None:intergenic
CCTCTGCACACTTCTCCTCA+GGG 0.642147 5:-8867696 None:intergenic
GCTGCAATGTGTGCAGCAGG+AGG 0.644204 5:+8865346 MsG0580024725.01.T01:CDS
CCCTGAGGAGAAGTGTGCAG+AGG 0.655036 5:+8867696 MsG0580024725.01.T01:CDS
GGTCAAATAATTGCATGTGG+TGG 0.656987 5:+8867661 MsG0580024725.01.T01:CDS
GTTAGTGTCAGTGTTACAAG+TGG 0.659841 5:+8865457 MsG0580024725.01.T01:CDS
TGCCAGGAACAATAACAAAG+TGG 0.667425 5:-8864680 None:intergenic
CATAATGCAACTTTCCACAA+TGG 0.674650 5:+8866319 MsG0580024725.01.T01:CDS
ATAAGGCCAAGCTTCACGAA+GGG 0.694309 5:-8864259 None:intergenic
AATGTTGTCAATTTGCACAT+GGG 0.704234 5:-8864703 None:intergenic
AATTGATTATGGGTCAACTG+GGG 0.744930 5:+8865639 MsG0580024725.01.T01:CDS
ATGCGTGAGAGACTTGATGG+TGG 0.746452 5:+8865688 MsG0580024725.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTATATTAAAAAGATG+TGG - Chr5:8868247-8868266 None:intergenic 10.0%
!! ATTAAAACAATAAAAGCAAA+AGG - Chr5:8864556-8864575 None:intergenic 15.0%
!! GAAAATTAAAAGATATAACA+TGG - Chr5:8866478-8866497 None:intergenic 15.0%
!! TTGAAATTATTTGTAAATGA+TGG + Chr5:8867800-8867819 MsG0580024725.01.T01:intron 15.0%
!!! AATAATTTGTTCTATGTATT+GGG + Chr5:8867839-8867858 MsG0580024725.01.T01:intron 15.0%
!!! TAATAATTTGTTCTATGTAT+TGG + Chr5:8867838-8867857 MsG0580024725.01.T01:intron 15.0%
!! AATTAGAATGAATTCAATTC+TGG - Chr5:8864439-8864458 None:intergenic 20.0%
!! CAAAGAAGTGATTATATTTA+GGG + Chr5:8865079-8865098 MsG0580024725.01.T01:intron 20.0%
!! TCAAAGAAGTGATTATATTT+AGG + Chr5:8865078-8865097 MsG0580024725.01.T01:intron 20.0%
!! TCATATAATACTTAGAATTG+CGG - Chr5:8868610-8868629 None:intergenic 20.0%
!!! AAGACAAGTTTTTTGTTTAA+AGG + Chr5:8868426-8868445 MsG0580024725.01.T01:intron 20.0%
!!! AATTATTTGTAAATGATGGA+TGG + Chr5:8867804-8867823 MsG0580024725.01.T01:intron 20.0%
!!! ATAGTTATTTTAACCAACTT+GGG + Chr5:8865715-8865734 MsG0580024725.01.T01:CDS 20.0%
!!! ATTGTTTTCTTTTTCTTTTC+AGG - Chr5:8868578-8868597 None:intergenic 20.0%
!!! TATAGTTATTTTAACCAACT+TGG + Chr5:8865714-8865733 MsG0580024725.01.T01:CDS 20.0%
!!! TGTATAATTTTAATCATCGA+AGG + Chr5:8868199-8868218 MsG0580024725.01.T01:intron 20.0%
!!! TTCTAAACTTTTAAGTATGT+GGG - Chr5:8867326-8867345 None:intergenic 20.0%
!!! TTGCTATTTTCTTTTTTGTT+AGG + Chr5:8864388-8864407 MsG0580024725.01.T01:intron 20.0%
!!! TTTCTAAACTTTTAAGTATG+TGG - Chr5:8867327-8867346 None:intergenic 20.0%
! AAGTTAATATGCGTTATAGA+TGG + Chr5:8866091-8866110 MsG0580024725.01.T01:CDS 25.0%
! AATAAGCTGAAAAAAGCTTA+TGG - Chr5:8864883-8864902 None:intergenic 25.0%
! AATGTTTAGACAAATTACCA+CGG - Chr5:8867570-8867589 None:intergenic 25.0%
! ACAACAGATTTACAATACAA+AGG - Chr5:8868834-8868853 None:intergenic 25.0%
! ACCTGAATTATGATTATGAA+AGG + Chr5:8867981-8868000 MsG0580024725.01.T01:intron 25.0%
! ATCAATATCAGACCAATAAT+AGG + Chr5:8866575-8866594 MsG0580024725.01.T01:intron 25.0%
! CATATAATACTTAGAATTGC+GGG - Chr5:8868609-8868628 None:intergenic 25.0%
! TAAAAGCTAAAACAACTTCA+AGG - Chr5:8866984-8867003 None:intergenic 25.0%
! TAACTAATGGTTTCTTGAAA+GGG - Chr5:8867141-8867160 None:intergenic 25.0%
! TCAGTAGATAAGTTCAAATA+AGG - Chr5:8864773-8864792 None:intergenic 25.0%
! TCCTTTCATAATCATAATTC+AGG - Chr5:8867985-8868004 None:intergenic 25.0%
! TGAAATATGTGCAGATTATA+TGG + Chr5:8868271-8868290 MsG0580024725.01.T01:intron 25.0%
! TGAATCATAAAATCAAACCT+TGG - Chr5:8865497-8865516 None:intergenic 25.0%
! TTAAAATTGTTATGCTCAAC+AGG - Chr5:8866253-8866272 None:intergenic 25.0%
! TTAATTCACAAGACATGTTT+GGG + Chr5:8868012-8868031 MsG0580024725.01.T01:intron 25.0%
! TTAGTAACAGTAATGTTTCT+GGG + Chr5:8864623-8864642 MsG0580024725.01.T01:intron 25.0%
! TTAGTTACAAAAAAGATCGA+AGG + Chr5:8867154-8867173 MsG0580024725.01.T01:intron 25.0%
!! AAGCTCTTTTGTAACAAATA+TGG - Chr5:8867925-8867944 None:intergenic 25.0%
!! AATAAAACATCGTAGGTTTT+TGG - Chr5:8867302-8867321 None:intergenic 25.0%
!! AATCATAATTCAGGTTTACA+TGG - Chr5:8867976-8867995 None:intergenic 25.0%
!! CTCAAAAAATCACTCTTTTT+AGG - Chr5:8868939-8868958 None:intergenic 25.0%
!! GTTGAGCATAACAATTTTAA+CGG + Chr5:8866253-8866272 MsG0580024725.01.T01:CDS 25.0%
!! GTTTCAAGAAGATATTTTTC+AGG + Chr5:8868149-8868168 MsG0580024725.01.T01:intron 25.0%
!! TTAAGCACTTAATACTGTTT+TGG + Chr5:8864794-8864813 MsG0580024725.01.T01:intron 25.0%
!!! ATCTGATATGTACTTTTTCT+AGG + Chr5:8865891-8865910 MsG0580024725.01.T01:intron 25.0%
!!! CTAAAAAGAGTGATTTTTTG+AGG + Chr5:8868937-8868956 MsG0580024725.01.T01:three_prime_UTR 25.0%
!!! TATTAGTGGAGTTTTATTGT+TGG + Chr5:8866805-8866824 MsG0580024725.01.T01:CDS 25.0%
!!! TCGATCTTTTTTGTAACTAA+TGG - Chr5:8867154-8867173 None:intergenic 25.0%
!!! TTGAGCATAACAATTTTAAC+GGG + Chr5:8866254-8866273 MsG0580024725.01.T01:CDS 25.0%
!!! TTGCAAGTTATTTTGTTCAA+GGG + Chr5:8866910-8866929 MsG0580024725.01.T01:intron 25.0%
!!! TTTTCTTTTTTGTTAGGTTC+TGG + Chr5:8864394-8864413 MsG0580024725.01.T01:intron 25.0%
!!! TTTTTTTTTGACAGAGAAGA+GGG + Chr5:8865605-8865624 MsG0580024725.01.T01:intron 25.0%
!!! TTTTTTTTTTGACAGAGAAG+AGG + Chr5:8865604-8865623 MsG0580024725.01.T01:intron 25.0%
AACTAATTGCCAAGAGAAAT+AGG + Chr5:8866938-8866957 MsG0580024725.01.T01:intron 30.0%
AATAAGAGTGGAATTACTGT+TGG + Chr5:8868644-8868663 MsG0580024725.01.T01:CDS 30.0%
AATATCAGACCAATAATAGG+TGG + Chr5:8866578-8866597 MsG0580024725.01.T01:intron 30.0%
AATGTTGTCAATTTGCACAT+GGG - Chr5:8864706-8864725 None:intergenic 30.0%
ACAGTAATTCCACTCTTATT+TGG - Chr5:8868644-8868663 None:intergenic 30.0%
ACTTGAAAATGGCTTATAGT+TGG + Chr5:8865040-8865059 MsG0580024725.01.T01:intron 30.0%
ATATGCAATATTCGTAGACA+TGG + Chr5:8865412-8865431 MsG0580024725.01.T01:CDS 30.0%
ATCACTAGTACAACTATTCT+GGG - Chr5:8868042-8868061 None:intergenic 30.0%
ATGACTAAGGTTTGAATTGT+GGG - Chr5:8868887-8868906 None:intergenic 30.0%
ATGTCTACGAATATTGCATA+TGG - Chr5:8865413-8865432 None:intergenic 30.0%
CAGTAACATGGTCAATTATA+AGG - Chr5:8865261-8865280 None:intergenic 30.0%
CTTGAAAATGGCTTATAGTT+GGG + Chr5:8865041-8865060 MsG0580024725.01.T01:intron 30.0%
GACAACATTCTCAAAGATAA+AGG + Chr5:8864717-8864736 MsG0580024725.01.T01:CDS 30.0%
GTAACTAATGGTTTCTTGAA+AGG - Chr5:8867142-8867161 None:intergenic 30.0%
GTTAGTAACAGTAATGTTTC+TGG + Chr5:8864622-8864641 MsG0580024725.01.T01:intron 30.0%
TATCACTAGTACAACTATTC+TGG - Chr5:8868043-8868062 None:intergenic 30.0%
TCTCAAAGATAAAGGTTAGT+TGG + Chr5:8864725-8864744 MsG0580024725.01.T01:intron 30.0%
TGCATCTAGTAACTTGAAAA+TGG + Chr5:8865029-8865048 MsG0580024725.01.T01:intron 30.0%
TGGAATTGTTTACAAGAGAT+GGG + Chr5:8866825-8866844 MsG0580024725.01.T01:CDS 30.0%
TTGGAATTGTTTACAAGAGA+TGG + Chr5:8866824-8866843 MsG0580024725.01.T01:CDS 30.0%
TTTCTTGAAAGGGAAAACAT+GGG - Chr5:8867131-8867150 None:intergenic 30.0%
! AACTATTTTCCAGTTACAAG+GGG + Chr5:8868692-8868711 MsG0580024725.01.T01:three_prime_UTR 30.0%
! AATGACATTGATTGTGGATA+AGG - Chr5:8868394-8868413 None:intergenic 30.0%
! AATTGGAGATTAAGTTGTTG+AGG - Chr5:8864105-8864124 None:intergenic 30.0%
! AGAACTATTTTCCAGTTACA+AGG + Chr5:8868690-8868709 MsG0580024725.01.T01:exon 30.0%
! ATAAAGGTTAGTTGGGTTAA+GGG + Chr5:8864733-8864752 MsG0580024725.01.T01:intron 30.0%
! ATACCATCTTCCATTTTATC+AGG + Chr5:8866748-8866767 MsG0580024725.01.T01:intron 30.0%
! CTCAAAGATAAAGGTTAGTT+GGG + Chr5:8864726-8864745 MsG0580024725.01.T01:intron 30.0%
! GAACTATTTTCCAGTTACAA+GGG + Chr5:8868691-8868710 MsG0580024725.01.T01:exon 30.0%
! GTGAAAAATGACATTGATTG+TGG - Chr5:8868400-8868419 None:intergenic 30.0%
! TACCATCTTCCATTTTATCA+GGG + Chr5:8866749-8866768 MsG0580024725.01.T01:intron 30.0%
! TCTATGTATTGGGATGTTTT+CGG + Chr5:8867849-8867868 MsG0580024725.01.T01:intron 30.0%
! TTTCAAACACCTATTTCTCT+TGG - Chr5:8866950-8866969 None:intergenic 30.0%
!! CAATTTTTGTTTCGAGACAA+TGG + Chr5:8864837-8864856 MsG0580024725.01.T01:intron 30.0%
!! CTTATTTTCATTAGCTCTTC+AGG + Chr5:8864897-8864916 MsG0580024725.01.T01:intron 30.0%
!! CTTGCAAGTTATTTTGTTCA+AGG + Chr5:8866909-8866928 MsG0580024725.01.T01:intron 30.0%
!! TGAGCATAACAATTTTAACG+GGG + Chr5:8866255-8866274 MsG0580024725.01.T01:CDS 30.0%
!! TTAACTTTTGAGTCTAAACG+TGG + Chr5:8864472-8864491 MsG0580024725.01.T01:intron 30.0%
!!! TTTTTTTTGACAGAGAAGAG+GGG + Chr5:8865606-8865625 MsG0580024725.01.T01:intron 30.0%
AAATATTGCCACTGTACTCT+GGG + Chr5:8866667-8866686 MsG0580024725.01.T01:intron 35.0%
AACGTCTAAGTCGAATGAAT+GGG + Chr5:8866407-8866426 MsG0580024725.01.T01:CDS 35.0%
AAGCTTCTACCAAATAAGAG+TGG + Chr5:8868632-8868651 MsG0580024725.01.T01:CDS 35.0%
AAGGATGTAAATATGCGAGT+TGG + Chr5:8867081-8867100 MsG0580024725.01.T01:intron 35.0%
AATTGATTATGGGTCAACTG+GGG + Chr5:8865639-8865658 MsG0580024725.01.T01:CDS 35.0%
AGAAATGACGAGAACAAAAG+TGG - Chr5:8864304-8864323 None:intergenic 35.0%
AGAGTAAAATCACATGTACC+AGG - Chr5:8867039-8867058 None:intergenic 35.0%
ATAGCAGCTAAACTTTCAGT+TGG + Chr5:8865382-8865401 MsG0580024725.01.T01:CDS 35.0%
ATGGAAAACGCATTACAGAA+TGG + Chr5:8866296-8866315 MsG0580024725.01.T01:CDS 35.0%
ATTGTTTACAAGAGATGGGA+TGG + Chr5:8866829-8866848 MsG0580024725.01.T01:CDS 35.0%
CAAACAACTTATTCAGCCTT+TGG + Chr5:8867447-8867466 MsG0580024725.01.T01:CDS 35.0%
CACAATTCAAACCTTAGTCA+TGG + Chr5:8868886-8868905 MsG0580024725.01.T01:three_prime_UTR 35.0%
CATAATGCAACTTTCCACAA+TGG + Chr5:8866319-8866338 MsG0580024725.01.T01:CDS 35.0%
CATGACTAAGGTTTGAATTG+TGG - Chr5:8868888-8868907 None:intergenic 35.0%
CTACGAATATTGCATATGGA+AGG - Chr5:8865409-8865428 None:intergenic 35.0%
GAAGCTGATTAATATCGTTC+TGG - Chr5:8867899-8867918 None:intergenic 35.0%
GAAGGTCAAATAATTGCATG+TGG + Chr5:8867658-8867677 MsG0580024725.01.T01:CDS 35.0%
GAATGTTGTCAATTTGCACA+TGG - Chr5:8864707-8864726 None:intergenic 35.0%
GAATTGATTATGGGTCAACT+GGG + Chr5:8865638-8865657 MsG0580024725.01.T01:CDS 35.0%
GGTCCAATACTTGATGAAAA+TGG + Chr5:8866112-8866131 MsG0580024725.01.T01:CDS 35.0%
GGTGAAAAACGAGGAATTAA+AGG - Chr5:8864139-8864158 None:intergenic 35.0%
GTTGGATAATTTCGTTGTTG+TGG + Chr5:8867630-8867649 MsG0580024725.01.T01:CDS 35.0%
GTTTCTTGAAAGGGAAAACA+TGG - Chr5:8867132-8867151 None:intergenic 35.0%
TACATCCTTACAGATAACTC+TGG - Chr5:8867070-8867089 None:intergenic 35.0%
TAGCATGCATGTACTCTATA+AGG - Chr5:8867216-8867235 None:intergenic 35.0%
TGTCTACATCAGATTGTTCA+TGG + Chr5:8867352-8867371 MsG0580024725.01.T01:intron 35.0%
TGTGGGAAATAAAACATCGT+AGG - Chr5:8867309-8867328 None:intergenic 35.0%
TTCGAGCTACAAGATTGTTA+CGG - Chr5:8868773-8868792 None:intergenic 35.0%
TTGTTTACAAGAGATGGGAT+GGG + Chr5:8866830-8866849 MsG0580024725.01.T01:CDS 35.0%
TTTATAGCTGCTACAAACGT+TGG + Chr5:8867612-8867631 MsG0580024725.01.T01:intron 35.0%
! ACTATTTTCCAGTTACAAGG+GGG + Chr5:8868693-8868712 MsG0580024725.01.T01:three_prime_UTR 35.0%
! ATAGCTTTTCTTCATCACCT+TGG + Chr5:8864654-8864673 MsG0580024725.01.T01:CDS 35.0%
! ATCTTCCATTTTATCAGGGA+GGG + Chr5:8866753-8866772 MsG0580024725.01.T01:intron 35.0%
! CAATAACAAAGTGGATTCCA+AGG - Chr5:8864674-8864693 None:intergenic 35.0%
! CATTGTTTCGTGATTTTGAG+CGG - Chr5:8864160-8864179 None:intergenic 35.0%
! CGTCCATTTTCATCAAGTAT+TGG - Chr5:8866118-8866137 None:intergenic 35.0%
! GATAAAGGTTAGTTGGGTTA+AGG + Chr5:8864732-8864751 MsG0580024725.01.T01:intron 35.0%
! GCAGAGAAAGAAGATTTTTC+TGG + Chr5:8867421-8867440 MsG0580024725.01.T01:CDS 35.0%
! GCCTATGAAAACAAGCTTTT+TGG + Chr5:8864923-8864942 MsG0580024725.01.T01:intron 35.0%
! TCAGTTGATGCATGTTTCTT+TGG + Chr5:8866712-8866731 MsG0580024725.01.T01:intron 35.0%
! TCTGTAATGCGTTTTCCATT+AGG - Chr5:8866295-8866314 None:intergenic 35.0%
!! ATCCACTTTGTTATTGTTCC+TGG + Chr5:8864678-8864697 MsG0580024725.01.T01:CDS 35.0%
!! ATGAAGTGGTGAAGTTGATA+GGG - Chr5:8864056-8864075 None:intergenic 35.0%
!! GAATTCAATTCTGGAGTCAA+AGG - Chr5:8864430-8864449 None:intergenic 35.0%
!! GCCAAAAAGCTTGTTTTCAT+AGG - Chr5:8864927-8864946 None:intergenic 35.0%
!! GCTTTTAAGAACAGTTCAGT+TGG + Chr5:8866997-8867016 MsG0580024725.01.T01:intron 35.0%
!! TGTTGATAGTCCTTCTTCTT+TGG + Chr5:8864332-8864351 MsG0580024725.01.T01:CDS 35.0%
!!! AATGGTGTTGGTTTTGAGAA+TGG + Chr5:8866337-8866356 MsG0580024725.01.T01:CDS 35.0%
!!! TATTTTTCAGGCTTCAGCTT+TGG + Chr5:8868161-8868180 MsG0580024725.01.T01:intron 35.0%
AAACCTTAGTCATGGAGTTG+AGG + Chr5:8868894-8868913 MsG0580024725.01.T01:three_prime_UTR 40.0%
AACATGGGAATGCTCACAAA+TGG - Chr5:8867116-8867135 None:intergenic 40.0%
AACATGTCTGCTTCTTCAAG+AGG - Chr5:8866157-8866176 None:intergenic 40.0%
AACTTCTTGACAGGTTTGTG+AGG + Chr5:8868519-8868538 MsG0580024725.01.T01:intron 40.0%
AAGAGTGGAATTACTGTTGG+TGG + Chr5:8868647-8868666 MsG0580024725.01.T01:CDS 40.0%
ACAACTTATTCAGCCTTTGG+AGG + Chr5:8867450-8867469 MsG0580024725.01.T01:CDS 40.0%
ACCATGTTACTGCGTTTACA+GGG + Chr5:8865269-8865288 MsG0580024725.01.T01:intron 40.0%
AGAATGGGATCCAAAGAAGA+AGG - Chr5:8864345-8864364 None:intergenic 40.0%
AGACATGTTAATTCGCAAGC+GGG + Chr5:8866168-8866187 MsG0580024725.01.T01:CDS 40.0%
AGACTTAAATAAGCACAGCC+AGG - Chr5:8866512-8866531 None:intergenic 40.0%
AGCAGCTAACTATGTGAAAG+CGG + Chr5:8866207-8866226 MsG0580024725.01.T01:CDS 40.0%
AGGCCTAAATGACATGGATT+AGG - Chr5:8868374-8868393 None:intergenic 40.0%
ATGATTCCCAACTTCTTGAC+AGG + Chr5:8868510-8868529 MsG0580024725.01.T01:intron 40.0%
ATGTACCAGGAAAAACCACA+AGG - Chr5:8867026-8867045 None:intergenic 40.0%
ATTCAATACTTCACCAGAGC+TGG - Chr5:8865746-8865765 None:intergenic 40.0%
CAAATATTGCCACTGTACTC+TGG + Chr5:8866666-8866685 MsG0580024725.01.T01:intron 40.0%
CACAAACCTGTCAAGAAGTT+GGG - Chr5:8868519-8868538 None:intergenic 40.0%
CAGACATGTTAATTCGCAAG+CGG + Chr5:8866167-8866186 MsG0580024725.01.T01:CDS 40.0%
CAGCAAACACCACCTATTAT+TGG - Chr5:8866590-8866609 None:intergenic 40.0%
CCACCTATGCTGAAAAATGA+GGG + Chr5:8865202-8865221 MsG0580024725.01.T01:intron 40.0%
CTACGATAAGCGAGAAGATA+AGG - Chr5:8864279-8864298 None:intergenic 40.0%
CTCCCTGATAAAATGGAAGA+TGG - Chr5:8866754-8866773 None:intergenic 40.0%
GAACGTCTAAGTCGAATGAA+TGG + Chr5:8866406-8866425 MsG0580024725.01.T01:CDS 40.0%
GACTTAAATAAGCACAGCCA+GGG - Chr5:8866511-8866530 None:intergenic 40.0%
GAGATCCAGAGTTATCTGTA+AGG + Chr5:8867062-8867081 MsG0580024725.01.T01:intron 40.0%
GCATGCATGATTACATGCAA+GGG - Chr5:8868225-8868244 None:intergenic 40.0%
GGAATTGATTATGGGTCAAC+TGG + Chr5:8865637-8865656 MsG0580024725.01.T01:CDS 40.0%
GGTCAAATAATTGCATGTGG+TGG + Chr5:8867661-8867680 MsG0580024725.01.T01:CDS 40.0%
GGTTCAAAGAGTTCACTTGT+TGG + Chr5:8866775-8866794 MsG0580024725.01.T01:CDS 40.0%
GTTAGTGTCAGTGTTACAAG+TGG + Chr5:8865457-8865476 MsG0580024725.01.T01:CDS 40.0%
TAAAGGAGCGAGGTTTGAAT+TGG - Chr5:8864122-8864141 None:intergenic 40.0%
TAACTATGTGAAAGCGGTTG+AGG + Chr5:8866213-8866232 MsG0580024725.01.T01:CDS 40.0%
TCACAAACCTGTCAAGAAGT+TGG - Chr5:8868520-8868539 None:intergenic 40.0%
TCCACCTATGCTGAAAAATG+AGG + Chr5:8865201-8865220 MsG0580024725.01.T01:intron 40.0%
TCGAGCTACAAGATTGTTAC+GGG - Chr5:8868772-8868791 None:intergenic 40.0%
TCTCAAAACCAACACCATTG+TGG - Chr5:8866336-8866355 None:intergenic 40.0%
TGCCAGGAACAATAACAAAG+TGG - Chr5:8864683-8864702 None:intergenic 40.0%
TGGATAAGGCCTAAATGACA+TGG - Chr5:8868380-8868399 None:intergenic 40.0%
TGGTCGGTGGAATTGATTAT+GGG + Chr5:8865629-8865648 MsG0580024725.01.T01:CDS 40.0%
TTACAACACGTACAGCAGAT+TGG + Chr5:8868336-8868355 MsG0580024725.01.T01:CDS 40.0%
TTACATAGCTTACATAGCCG+TGG + Chr5:8867550-8867569 MsG0580024725.01.T01:intron 40.0%
TTCGTTGTTGTGGAAAGAGA+AGG + Chr5:8867640-8867659 MsG0580024725.01.T01:CDS 40.0%
TTCTTTGGATCCCATTCTCA+AGG + Chr5:8864347-8864366 MsG0580024725.01.T01:CDS 40.0%
TTGAACAACGAAGGAGTGAA+CGG + Chr5:8864195-8864214 MsG0580024725.01.T01:CDS 40.0%
TTGAGAATGGAGATGGCTTA+GGG + Chr5:8866350-8866369 MsG0580024725.01.T01:CDS 40.0%
TTGTAGCTCGAATCTGTGTT+TGG + Chr5:8868781-8868800 MsG0580024725.01.T01:three_prime_UTR 40.0%
TTGTTGGATGGCACTATTAG+TGG + Chr5:8866791-8866810 MsG0580024725.01.T01:CDS 40.0%
TTTGAGAATGGAGATGGCTT+AGG + Chr5:8866349-8866368 MsG0580024725.01.T01:CDS 40.0%
! AATTTTCTTGTCAAGTGCCC+TGG + Chr5:8866491-8866510 MsG0580024725.01.T01:intron 40.0%
! AGTTGAGGAGTACAGTAGAT+TGG + Chr5:8868909-8868928 MsG0580024725.01.T01:three_prime_UTR 40.0%
! ATTTTGAGCGGTGAAAAACG+AGG - Chr5:8864148-8864167 None:intergenic 40.0%
! CAAAGAGTTCACTTGTTGGA+TGG + Chr5:8866779-8866798 MsG0580024725.01.T01:CDS 40.0%
! CATCTTCCATTTTATCAGGG+AGG + Chr5:8866752-8866771 MsG0580024725.01.T01:intron 40.0%
! GAGGATTGAAGTGAGAGTAT+TGG - Chr5:8864086-8864105 None:intergenic 40.0%
! GATGAAGTGGTGAAGTTGAT+AGG - Chr5:8864057-8864076 None:intergenic 40.0%
! GATGCATTTGTTGCTTCTTC+AGG - Chr5:8865015-8865034 None:intergenic 40.0%
! GGCCTAAATGACATGGATTA+GGG - Chr5:8868373-8868392 None:intergenic 40.0%
! GTAAGTGTGATTGGAAGCAT+GGG + Chr5:8868715-8868734 MsG0580024725.01.T01:three_prime_UTR 40.0%
! GTAATGCGTTTTCCATTAGG+TGG - Chr5:8866292-8866311 None:intergenic 40.0%
! TCCCCTAATCCATGTCATTT+AGG + Chr5:8868368-8868387 MsG0580024725.01.T01:intron 40.0%
! TCTTCCATTTTATCAGGGAG+GGG + Chr5:8866754-8866773 MsG0580024725.01.T01:intron 40.0%
! TTTTGCAGTGACCTTTACGA+AGG + Chr5:8867388-8867407 MsG0580024725.01.T01:intron 40.0%
!! AGCTGCTATTTCACTTTGCT+CGG - Chr5:8866194-8866213 None:intergenic 40.0%
!! GAAGTTGATAGGGTTTGGAA+GGG - Chr5:8864046-8864065 None:intergenic 40.0%
!! GCCTAAATGACATGGATTAG+GGG - Chr5:8868372-8868391 None:intergenic 40.0%
!! TGAAGTTGATAGGGTTTGGA+AGG - Chr5:8864047-8864066 None:intergenic 40.0%
!!! GTTGGGTTAAGGGTTTTGTT+TGG + Chr5:8864743-8864762 MsG0580024725.01.T01:intron 40.0%
!!! GTTGGTTTTGAGAATGGAGA+TGG + Chr5:8866343-8866362 MsG0580024725.01.T01:CDS 40.0%
AACGAGGAATTAAAGGAGCG+AGG - Chr5:8864132-8864151 None:intergenic 45.0%
AAGAGATGGGATGGGAACAA+TGG + Chr5:8866838-8866857 MsG0580024725.01.T01:CDS 45.0%
AATGCTACATGTCGAAGACC+TGG - Chr5:8868809-8868828 None:intergenic 45.0%
ACAAGCTGTTGCAACCTCAT+AGG - Chr5:8866050-8866069 None:intergenic 45.0%
ACTCCTCAACTCCATGACTA+AGG - Chr5:8868900-8868919 None:intergenic 45.0%
AGGGCTCTTCAATCGTAACA+CGG + Chr5:8865221-8865240 MsG0580024725.01.T01:intron 45.0%
ATAAGGCCAAGCTTCACGAA+GGG - Chr5:8864262-8864281 None:intergenic 45.0%
CAAGAGGCAAGAAACGAATC+AGG - Chr5:8866141-8866160 None:intergenic 45.0%
CTAAGGTTTGAATTGTGGGC+AGG - Chr5:8868883-8868902 None:intergenic 45.0%
CTGCTGTACGTGTTGTAAGT+AGG - Chr5:8868334-8868353 None:intergenic 45.0%
GAATGGGTACCTGTCAGAAT+TGG + Chr5:8866423-8866442 MsG0580024725.01.T01:CDS 45.0%
GACCATGTTACTGCGTTTAC+AGG + Chr5:8865268-8865287 MsG0580024725.01.T01:intron 45.0%
GAGAAGAAAGCAGCATCTCT+TGG + Chr5:8868293-8868312 MsG0580024725.01.T01:CDS 45.0%
GCAACTTTCCACAATGGTGT+TGG + Chr5:8866325-8866344 MsG0580024725.01.T01:CDS 45.0%
GCAGTCAAATCTCCACCTAA+TGG + Chr5:8866277-8866296 MsG0580024725.01.T01:CDS 45.0%
GGAGCAAGGCTAAGTATGTT+GGG + Chr5:8865290-8865309 MsG0580024725.01.T01:CDS 45.0%
GGCATGCATGATTACATGCA+AGG - Chr5:8868226-8868245 None:intergenic 45.0%
GGTAAGTGTGATTGGAAGCA+TGG + Chr5:8868714-8868733 MsG0580024725.01.T01:three_prime_UTR 45.0%
GTGAACGGAATCACTGAAGA+AGG + Chr5:8864210-8864229 MsG0580024725.01.T01:CDS 45.0%
GTGGTCGGTGGAATTGATTA+TGG + Chr5:8865628-8865647 MsG0580024725.01.T01:CDS 45.0%
TACAAGGGGGTAAGTGTGAT+TGG + Chr5:8868706-8868725 MsG0580024725.01.T01:three_prime_UTR 45.0%
TCCCTGTAAACGCAGTAACA+TGG - Chr5:8865273-8865292 None:intergenic 45.0%
TCGAATCTGTGTTTGGTACC+AGG + Chr5:8868788-8868807 MsG0580024725.01.T01:three_prime_UTR 45.0%
TCTCCTCAGGGTAAGGAAAA+AGG - Chr5:8867687-8867706 None:intergenic 45.0%
TGAACCCCTCCCTGATAAAA+TGG - Chr5:8866761-8866780 None:intergenic 45.0%
TGGTAACTTTCTTGCAGCCA+AGG + Chr5:8865477-8865496 MsG0580024725.01.T01:CDS 45.0%
TTCTTTCTCCAGCACCTATG+AGG + Chr5:8866033-8866052 MsG0580024725.01.T01:intron 45.0%
TTGAATTGTGGGCAGGACAA+GGG - Chr5:8868876-8868895 None:intergenic 45.0%
TTTGAATTGTGGGCAGGACA+AGG - Chr5:8868877-8868896 None:intergenic 45.0%
! CATGTGGCATACTGGTTAAG+CGG + Chr5:8867473-8867492 MsG0580024725.01.T01:CDS 45.0%
! GGTTTGGAAGGGAAGTATAG+AGG - Chr5:8864035-8864054 None:intergenic 45.0%
! GTATAGAGGCGCGATAAAGA+AGG - Chr5:8864021-8864040 None:intergenic 45.0%
! GTATTGGCGAGAAGATGAAG+TGG - Chr5:8864070-8864089 None:intergenic 45.0%
! TTTTTGACAGAGAAGAGGGG+TGG + Chr5:8865609-8865628 MsG0580024725.01.T01:intron 45.0%
!! ACAGTAATGTTTCTGGGTGC+AGG + Chr5:8864629-8864648 MsG0580024725.01.T01:intron 45.0%
!! CCCTCATTTTTCAGCATAGG+TGG - Chr5:8865205-8865224 None:intergenic 45.0%
!! GAGCCCTCATTTTTCAGCAT+AGG - Chr5:8865208-8865227 None:intergenic 45.0%
!! GTGGTGAAGTTGATAGGGTT+TGG - Chr5:8864051-8864070 None:intergenic 45.0%
!! TGCTGCAGCTTTTGTTTGCA+GGG + Chr5:8866447-8866466 MsG0580024725.01.T01:CDS 45.0%
!!! CTTTTCGAGTGCCTTCGTAA+AGG - Chr5:8867402-8867421 None:intergenic 45.0%
!! AAATAATCATATTAATATTA+AGG - Chr5:8866012-8866031 None:intergenic 5.0%
ACAGCTTGTGCCTTGGCAAT+TGG + Chr5:8866061-8866080 MsG0580024725.01.T01:CDS 50.0%
AGATGGGATGGGAACAATGG+TGG + Chr5:8866841-8866860 MsG0580024725.01.T01:CDS 50.0%
AGCTTGTGCCTTGGCAATTG+GGG + Chr5:8866063-8866082 MsG0580024725.01.T01:CDS 50.0%
AGTATGCCACATGCCTCCAA+AGG - Chr5:8867466-8867485 None:intergenic 50.0%
ATGCGTGAGAGACTTGATGG+TGG + Chr5:8865688-8865707 MsG0580024725.01.T01:CDS 50.0%
CACACTTACCCCCTTGTAAC+TGG - Chr5:8868704-8868723 None:intergenic 50.0%
CAGCTTGTGCCTTGGCAATT+GGG + Chr5:8866062-8866081 MsG0580024725.01.T01:CDS 50.0%
CAGTTCAGTTGGCATCCTTG+TGG + Chr5:8867008-8867027 MsG0580024725.01.T01:intron 50.0%
CGCAATGCGTTGAACAACGA+AGG + Chr5:8864186-8864205 MsG0580024725.01.T01:CDS 50.0%
GATAAGGCCAAGCTTCACGA+AGG - Chr5:8864263-8864282 None:intergenic 50.0%
GCATGCCTTGCCTTGAGAAT+GGG - Chr5:8864360-8864379 None:intergenic 50.0%
GGGAGCAAGGCTAAGTATGT+TGG + Chr5:8865289-8865308 MsG0580024725.01.T01:intron 50.0%
GGTTAAGCGGTCTGATGAAG+AGG + Chr5:8867486-8867505 MsG0580024725.01.T01:CDS 50.0%
GTGAAAGCGGTTGAGGAAGA+AGG + Chr5:8866220-8866239 MsG0580024725.01.T01:CDS 50.0%
TACTGCGTTTACAGGGAGCA+AGG + Chr5:8865276-8865295 MsG0580024725.01.T01:intron 50.0%
TATTGCCACTGTACTCTGGG+TGG + Chr5:8866670-8866689 MsG0580024725.01.T01:intron 50.0%
TCAATTTGCACATGGGTGCC+AGG - Chr5:8864699-8864718 None:intergenic 50.0%
TGCATGCCTTGCCTTGAGAA+TGG - Chr5:8864361-8864380 None:intergenic 50.0%
TGGATCCCATTCTCAAGGCA+AGG + Chr5:8864352-8864371 MsG0580024725.01.T01:CDS 50.0%
TGTTGCAACCTCATAGGTGC+TGG - Chr5:8866044-8866063 None:intergenic 50.0%
TTCGTTCCCTTCGTGAAGCT+TGG + Chr5:8864253-8864272 MsG0580024725.01.T01:CDS 50.0%
! AGCGAGCAAGGCTTTGCTAT+TGG + Chr5:8866376-8866395 MsG0580024725.01.T01:CDS 50.0%
! ATTCAGCCTTTGGAGGCATG+TGG + Chr5:8867457-8867476 MsG0580024725.01.T01:CDS 50.0%
! GGCATCCTTGTGGTTTTTCC+TGG + Chr5:8867018-8867037 MsG0580024725.01.T01:intron 50.0%
! TGGCCTTTTTCCTTACCCTG+AGG + Chr5:8867681-8867700 MsG0580024725.01.T01:CDS 50.0%
! TTTGGAGGCATGTGGCATAC+TGG + Chr5:8867465-8867484 MsG0580024725.01.T01:CDS 50.0%
!! CTGCTGCAGCTTTTGTTTGC+AGG + Chr5:8866446-8866465 MsG0580024725.01.T01:CDS 50.0%
!! GAGCAAGGCTTTGCTATTGG+AGG + Chr5:8866379-8866398 MsG0580024725.01.T01:CDS 50.0%
AACGCTGCAATGTGTGCAGC+AGG + Chr5:8865343-8865362 MsG0580024725.01.T01:CDS 55.0%
AACTTGGGCTACTCCAGCTC+TGG + Chr5:8865730-8865749 MsG0580024725.01.T01:CDS 55.0%
ACCTCTGCACACTTCTCCTC+AGG - Chr5:8867700-8867719 None:intergenic 55.0%
AGAGCTGGAGTAGCCCAAGT+TGG - Chr5:8865731-8865750 None:intergenic 55.0%
CCAAACCACCCAGAGTACAG+TGG - Chr5:8866678-8866697 None:intergenic 55.0%
CCACTGTACTCTGGGTGGTT+TGG + Chr5:8866675-8866694 MsG0580024725.01.T01:intron 55.0%
CCTCTGCACACTTCTCCTCA+GGG - Chr5:8867699-8867718 None:intergenic 55.0%
CGCATGCGTGAGAGACTTGA+TGG + Chr5:8865685-8865704 MsG0580024725.01.T01:CDS 55.0%
CTGCAGCAGCCAATTCTGAC+AGG - Chr5:8866435-8866454 None:intergenic 55.0%
CTTGACAGGTTTGTGAGGCG+TGG + Chr5:8868524-8868543 MsG0580024725.01.T01:intron 55.0%
GCAATTTGTCTCCCTGCCCT+TGG - Chr5:8867756-8867775 None:intergenic 55.0%
GCACACTTCTCCTCAGGGTA+AGG - Chr5:8867694-8867713 None:intergenic 55.0%
GCAGTATCTCCTGATTGCCG+TGG + Chr5:8867730-8867749 MsG0580024725.01.T01:CDS 55.0%
GGATGGGAACAATGGTGGCT+AGG + Chr5:8866846-8866865 MsG0580024725.01.T01:CDS 55.0%
GGGCAGGGAGACAAATTGCT+TGG + Chr5:8867757-8867776 MsG0580024725.01.T01:CDS 55.0%
GGTTGCAACAGCTTGTGCCT+TGG + Chr5:8866054-8866073 MsG0580024725.01.T01:CDS 55.0%
TGACAGAGAAGAGGGGTGGT+CGG + Chr5:8865613-8865632 MsG0580024725.01.T01:intron 55.0%
TTGTGCCTTGGCAATTGGGG+CGG + Chr5:8866066-8866085 MsG0580024725.01.T01:CDS 55.0%
CTCCTGATTGCCGTGGCCAA+GGG + Chr5:8867737-8867756 MsG0580024725.01.T01:CDS 60.0%
CTTGTCCGCCCCAATTGCCA+AGG - Chr5:8866074-8866093 None:intergenic 60.0%
GCTGCAATGTGTGCAGCAGG+AGG + Chr5:8865346-8865365 MsG0580024725.01.T01:CDS 60.0%
TCTCCTGATTGCCGTGGCCA+AGG + Chr5:8867736-8867755 MsG0580024725.01.T01:CDS 60.0%
! CCCTGAGGAGAAGTGTGCAG+AGG + Chr5:8867696-8867715 MsG0580024725.01.T01:CDS 60.0%
! GGCTTAGGGACTAGCGAGCA+AGG + Chr5:8866364-8866383 MsG0580024725.01.T01:CDS 60.0%
CAGAGAAGAGGGGTGGTCGG+TGG + Chr5:8865616-8865635 MsG0580024725.01.T01:intron 65.0%
GATTGCCGTGGCCAAGGGCA+GGG + Chr5:8867742-8867761 MsG0580024725.01.T01:CDS 65.0%
TGATTGCCGTGGCCAAGGGC+AGG + Chr5:8867741-8867760 MsG0580024725.01.T01:CDS 65.0%
TGCCCTTGGCCACGGCAATC+AGG - Chr5:8867742-8867761 None:intergenic 65.0%
TGTCTCCCTGCCCTTGGCCA+CGG - Chr5:8867750-8867769 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 8864012 8868959 8864012 ID=MsG0580024725.01;Name=MsG0580024725.01
Chr5 mRNA 8864012 8868959 8864012 ID=MsG0580024725.01.T01;Parent=MsG0580024725.01;Name=MsG0580024725.01.T01;_AED=0.42;_eAED=0.43;_QI=0|0.88|0.9|1|1|1|10|268|622
Chr5 exon 8864012 8864404 8864012 ID=MsG0580024725.01.T01:exon:2815;Parent=MsG0580024725.01.T01
Chr5 exon 8864651 8864738 8864651 ID=MsG0580024725.01.T01:exon:2816;Parent=MsG0580024725.01.T01
Chr5 exon 8865290 8865498 8865290 ID=MsG0580024725.01.T01:exon:2817;Parent=MsG0580024725.01.T01
Chr5 exon 8865619 8865770 8865619 ID=MsG0580024725.01.T01:exon:2818;Parent=MsG0580024725.01.T01
Chr5 exon 8866045 8866468 8866045 ID=MsG0580024725.01.T01:exon:2819;Parent=MsG0580024725.01.T01
Chr5 exon 8866770 8866867 8866770 ID=MsG0580024725.01.T01:exon:2820;Parent=MsG0580024725.01.T01
Chr5 exon 8867396 8867507 8867396 ID=MsG0580024725.01.T01:exon:2821;Parent=MsG0580024725.01.T01
Chr5 exon 8867619 8867778 8867619 ID=MsG0580024725.01.T01:exon:2822;Parent=MsG0580024725.01.T01
Chr5 exon 8868285 8868357 8868285 ID=MsG0580024725.01.T01:exon:2823;Parent=MsG0580024725.01.T01
Chr5 exon 8868532 8868959 8868532 ID=MsG0580024725.01.T01:exon:2824;Parent=MsG0580024725.01.T01
Chr5 CDS 8864012 8864404 8864012 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8864651 8864738 8864651 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8865290 8865498 8865290 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8865619 8865770 8865619 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8866045 8866468 8866045 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8866770 8866867 8866770 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8867396 8867507 8867396 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8867619 8867778 8867619 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8868285 8868357 8868285 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 CDS 8868532 8868691 8868532 ID=MsG0580024725.01.T01:cds;Parent=MsG0580024725.01.T01
Chr5 three_prime_UTR 8868692 8868959 8868692 ID=MsG0580024725.01.T01:three_prime_utr;Parent=MsG0580024725.01.T01
Gene Sequence

>MsG0580024725.01.T01

ATGGCTCCTTCTTTATCGCGCCTCTATACTTCCCTTCCAAACCCTATCAACTTCACCACTTCATCTTCTCGCCAATACTCTCACTTCAATCCTCAACAACTTAATCTCCAATTCAAACCTCGCTCCTTTAATTCCTCGTTTTTCACCGCTCAAAATCACGAAACAATGACAAAACGCAATGCGTTGAACAACGAAGGAGTGAACGGAATCACTGAAGAAGGAGATGAACAACAACAATTCATTCGTTCCCTTCGTGAAGCTTGGCCTTATCTTCTCGCTTATCGTAGAACCACTTTTGTTCTCGTCATTTCTGCTGAAATTGTTGATAGTCCTTCTTCTTTGGATCCCATTCTCAAGGCAAGGCATGCACTTCAAATTGCTATTTTCTTTTTTGATATAGCTTTTCTTCATCACCTTGGAATCCACTTTGTTATTGTTCCTGGCACCCATGTGCAAATTGACAACATTCTCAAAGATAAAGGGAGCAAGGCTAAGTATGTTGGGAGATATAGAATAACAGACGATGAATCTCTAAACGCTGCAATGTGTGCAGCAGGAGGAATAATGTCGATGATAGCAGCTAAACTTTCAGTTGGACCTTCCATATGCAATATTCGTAGACATGGTGATAATAGTCGATTGCATGACGTTAGTGTCAGTGTTACAAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCGGTGGAATTGATTATGGGTCAACTGGGGAAGTTAAAAAAATAGACGCTACTCGCATGCGTGAGAGACTTGATGGTGGTTCTATAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGTGAAGTATTGAATTGCAACACCTATGAGGTTGCAACAGCTTGTGCCTTGGCAATTGGGGCGGACAAGTTAATATGCGTTATAGATGGTCCAATACTTGATGAAAATGGACGCCTGATTCGTTTCTTGCCTCTTGAAGAAGCAGACATGTTAATTCGCAAGCGGGCCGAGCAAAGTGAAATAGCAGCTAACTATGTGAAAGCGGTTGAGGAAGAAGGTTTAAATCCTGTTGAGCATAACAATTTTAACGGGGCAGTCAAATCTCCACCTAATGGAAAACGCATTACAGAATGGCATAATGCAACTTTCCACAATGGTGTTGGTTTTGAGAATGGAGATGGCTTAGGGACTAGCGAGCAAGGCTTTGCTATTGGAGGTCAAGAACGTCTAAGTCGAATGAATGGGTACCTGTCAGAATTGGCTGCTGCAGCTTTTGTTTGCAGGGGAGGGGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTATTGTTGGAATTGTTTACAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTACGAAGGCACTCGAAAAGCAGAGAAAGAAGATTTTTCTGGAATCAAACAACTTATTCAGCCTTTGGAGGCATGTGGCATACTGGTTAAGCGGTCTGATGAAGAGCTGCTACAAACGTTGGATAATTTCGTTGTTGTGGAAAGAGAAGGTCAAATAATTGCATGTGGTGGCCTTTTTCCTTACCCTGAGGAGAAGTGTGCAGAGGTTGCTGCTATTGCAGTATCTCCTGATTGCCGTGGCCAAGGGCAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCAGCATCTCTTGGATTCAATAAGCTTTTCCTACTTACAACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATAATATTCCTGAAAAGAAAAAGAAAACAATCAACATGTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAGAGTGGAATTACTGTTGGTGGAAACAAATTAGTTACAAATTAG

Protein sequence

>MsG0580024725.01.T01

MAPSLSRLYTSLPNPINFTTSSSRQYSHFNPQQLNLQFKPRSFNSSFFTAQNHETMTKRNALNNEGVNGITEEGDEQQQFIRSLREAWPYLLAYRRTTFVLVISAEIVDSPSSLDPILKARHALQIAIFFFDIAFLHHLGIHFVIVPGTHVQIDNILKDKGSKAKYVGRYRITDDESLNAAMCAAGGIMSMIAAKLSVGPSICNIRRHGDNSRLHDVSVSVTSGNFLAAKRRGVVGGIDYGSTGEVKKIDATRMRERLDGGSIVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICVIDGPILDENGRLIRFLPLEEADMLIRKRAEQSEIAANYVKAVEEEGLNPVEHNNFNGAVKSPPNGKRITEWHNATFHNGVGFENGDGLGTSEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFTRDGMGTMVASDLYEGTRKAEKEDFSGIKQLIQPLEACGILVKRSDEELLQTLDNFVVVEREGQIIACGGLFPYPEEKCAEVAAIAVSPDCRGQGQGDKLLDYMEKKAASLGFNKLFLLTTRTADWFVRRGFSECSIDNIPEKKKKTINMSRNSKYYMKKLLPNKSGITVGGNKLVTN*