AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0057870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0057870 MtrunA17_Chr1g0157051 96.226 318 11 1 1 317 1 318 0.0 636
Msa0057870 MtrunA17_Chr8g0371381 73.913 299 77 1 18 316 21 318 7.47e-166 464
Msa0057870 MtrunA17_Chr5g0405991 69.620 316 95 1 1 316 1 315 7.07e-162 454
Msa0057870 MtrunA17_Chr1g0204011 54.516 310 139 2 9 316 12 321 7.67e-124 357
Msa0057870 MtrunA17_Chr1g0188431 49.320 294 137 4 23 313 39 323 1.86e-97 290
Msa0057870 MtrunA17_Chr6g0477071 46.284 296 147 4 21 313 52 338 6.35e-92 277
Msa0057870 MtrunA17_Chr2g0279041 44.479 317 163 4 7 313 8 321 1.98e-90 273
Msa0057870 MtrunA17_Chr7g0268501 45.215 303 159 4 18 316 20 319 1.44e-89 270
Msa0057870 MtrunA17_Chr7g0268521 45.215 303 159 4 18 316 20 319 1.44e-89 270
Msa0057870 MtrunA17_Chr3g0128061 43.671 316 172 4 7 316 10 325 6.89e-87 263
Msa0057870 MtrunA17_Chr2g0322861 42.994 314 172 5 9 316 73 385 1.59e-85 262
Msa0057870 MtrunA17_Chr1g0148021 44.237 321 165 9 7 316 10 327 4.48e-84 256
Msa0057870 MtrunA17_Chr1g0194151 44.648 327 169 9 1 316 7 332 3.42e-81 249
Msa0057870 MtrunA17_Chr7g0225221 43.574 319 164 8 5 313 4 316 5.06e-81 248
Msa0057870 MtrunA17_Chr1g0194271 43.114 334 171 9 1 316 7 339 1.98e-80 248
Msa0057870 MtrunA17_Chr4g0063671 40.557 323 177 6 1 314 1 317 1.11e-79 245
Msa0057870 MtrunA17_Chr5g0402571 43.478 299 166 3 7 302 10 308 5.01e-79 243
Msa0057870 MtrunA17_Chr5g0402581 42.089 316 177 4 7 316 10 325 1.05e-78 243
Msa0057870 MtrunA17_Chr3g0129051 42.947 319 167 7 3 313 7 318 1.11e-78 242
Msa0057870 MtrunA17_Chr4g0053871 42.500 320 166 8 7 316 12 323 1.52e-78 242
Msa0057870 MtrunA17_Chr4g0013721 42.295 305 172 4 15 316 92 395 1.64e-78 245
Msa0057870 MtrunA17_Chr4g0070951 43.438 320 167 8 7 316 13 328 1.75e-78 242
Msa0057870 MtrunA17_Chr4g0072091 43.144 299 159 5 23 313 24 319 2.82e-78 241
Msa0057870 MtrunA17_Chr4g0024121 39.564 321 185 4 3 316 7 325 3.80e-78 241
Msa0057870 MtrunA17_Chr1g0164891 43.854 301 160 7 25 316 91 391 4.36e-78 243
Msa0057870 MtrunA17_Chr2g0292091 41.195 318 178 6 8 317 9 325 3.81e-77 239
Msa0057870 MtrunA17_Chr3g0106921 40.752 319 172 7 3 313 7 316 1.13e-76 237
Msa0057870 MtrunA17_Chr5g0438021 42.357 314 167 6 10 316 18 324 2.19e-76 236
Msa0057870 MtrunA17_Chr5g0401431 39.441 322 183 6 5 316 9 328 6.07e-76 236
Msa0057870 MtrunA17_Chr3g0114451 42.236 322 169 7 1 313 1 314 9.16e-76 235
Msa0057870 MtrunA17_Chr4g0013181 44.595 296 148 8 26 313 62 349 1.12e-75 236
Msa0057870 MtrunA17_Chr5g0404721 43.564 303 165 5 17 313 24 326 1.39e-75 235
Msa0057870 MtrunA17_Chr2g0292151 42.193 301 167 4 23 316 29 329 3.95e-75 234
Msa0057870 MtrunA17_Chr4g0013171 42.763 304 160 6 17 313 21 317 5.61e-75 233
Msa0057870 MtrunA17_Chr5g0432441 41.720 314 167 6 9 313 16 322 9.62e-75 233
Msa0057870 MtrunA17_Chr2g0292101 41.956 317 175 6 8 316 10 325 2.29e-74 232
Msa0057870 MtrunA17_Chr2g0292271 39.748 317 184 4 8 317 14 330 3.62e-74 232
Msa0057870 MtrunA17_Chr2g0291751 42.424 297 164 4 27 316 33 329 4.52e-74 232
Msa0057870 MtrunA17_Chr4g0046131 40.000 315 179 6 11 315 30 344 4.86e-74 231
Msa0057870 MtrunA17_Chr4g0068621 42.345 307 167 7 17 316 32 335 5.52e-74 231
Msa0057870 MtrunA17_Chr1g0175561 38.820 322 187 7 1 313 2 322 7.00e-74 230
Msa0057870 MtrunA17_Chr1g0213061 37.423 326 186 7 1 316 3 320 1.67e-73 229
Msa0057870 MtrunA17_Chr2g0320091 40.468 299 161 6 26 316 28 317 2.10e-73 229
Msa0057870 MtrunA17_Chr7g0254231 37.874 301 166 6 23 315 22 309 4.16e-73 228
Msa0057870 MtrunA17_Chr2g0320071 39.877 326 176 8 1 316 1 316 4.94e-73 228
Msa0057870 MtrunA17_Chr7g0254201 39.731 297 169 5 23 315 20 310 5.84e-73 228
Msa0057870 MtrunA17_Chr2g0320051 40.498 321 170 9 7 316 7 317 5.98e-73 228
Msa0057870 MtrunA17_Chr2g0292211 42.623 305 160 6 23 316 40 340 6.05e-73 229
Msa0057870 MtrunA17_Chr4g0013821 40.333 300 175 4 20 316 25 323 1.25e-72 228
Msa0057870 MtrunA17_Chr2g0320061 41.667 300 156 8 26 316 28 317 1.53e-72 226
Msa0057870 MtrunA17_Chr7g0258811 40.190 316 179 7 7 313 53 367 1.80e-72 228
Msa0057870 MtrunA17_Chr2g0292251 41.391 302 170 4 23 317 28 329 5.33e-72 226
Msa0057870 MtrunA17_Chr3g0129061 42.320 319 169 7 3 313 7 318 6.19e-72 225
Msa0057870 MtrunA17_Chr6g0460711 37.025 316 181 7 7 313 4 310 9.30e-72 224
Msa0057870 MtrunA17_Chr2g0320101 39.264 326 178 8 1 316 1 316 1.04e-71 224
Msa0057870 MtrunA17_Chr2g0279061 46.063 254 127 3 67 313 12 262 1.33e-71 222
Msa0057870 MtrunA17_Chr2g0320031 39.024 328 178 9 1 316 1 318 3.55e-71 223
Msa0057870 MtrunA17_Chr8g0364291 41.049 324 172 8 7 314 1 321 2.39e-70 221
Msa0057870 MtrunA17_Chr1g0197411 38.679 318 183 9 8 314 11 327 4.11e-70 221
Msa0057870 MtrunA17_Chr2g0292241 40.063 317 182 5 7 316 14 329 4.48e-70 221
Msa0057870 MtrunA17_Chr2g0299691 40.798 326 176 8 5 316 35 357 6.30e-70 221
Msa0057870 MtrunA17_Chr8g0372601 40.789 304 174 4 19 316 26 329 6.45e-70 220
Msa0057870 MtrunA17_Chr2g0278671 39.535 301 171 4 21 313 22 319 7.08e-70 220
Msa0057870 MtrunA17_Chr7g0244451 38.629 321 181 7 2 316 5 315 8.50e-70 219
Msa0057870 MtrunA17_Chr4g0038151 38.365 318 182 6 7 316 9 320 9.74e-70 219
Msa0057870 MtrunA17_Chr4g0038171 38.957 326 183 8 1 316 1 320 1.99e-69 219
Msa0057870 MtrunA17_Chr2g0296621 39.145 304 174 4 17 316 44 340 2.17e-69 219
Msa0057870 MtrunA17_Chr7g0244461 37.855 317 182 7 8 317 4 312 2.79e-69 218
Msa0057870 MtrunA17_Chr7g0224371 39.016 305 173 5 17 316 25 321 4.48e-69 218
Msa0057870 MtrunA17_Chr3g0136751 38.095 315 182 5 7 313 9 318 5.86e-69 218
Msa0057870 MtrunA17_Chr4g0013201 39.458 332 177 8 1 316 14 337 6.02e-69 218
Msa0057870 MtrunA17_Chr5g0432351 40.000 320 174 8 7 316 9 320 6.13e-69 218
Msa0057870 MtrunA17_Chr2g0292111 39.597 298 171 6 27 316 33 329 7.23e-69 218
Msa0057870 MtrunA17_Chr3g0129041 42.006 319 170 7 3 313 7 318 1.00e-68 217
Msa0057870 MtrunA17_Chr2g0292261 39.319 323 176 8 7 316 14 329 1.61e-68 217
Msa0057870 MtrunA17_Chr5g0432331 40.244 328 176 9 1 316 32 351 2.40e-68 217
Msa0057870 MtrunA17_Chr4g0043391 38.532 327 183 8 1 316 4 323 3.36e-68 216
Msa0057870 MtrunA17_Chr5g0432341 39.634 328 178 9 1 316 1 320 4.42e-68 215
Msa0057870 MtrunA17_Chr1g0155611 41.503 306 170 6 19 316 42 346 8.71e-68 215
Msa0057870 MtrunA17_Chr2g0292291 38.944 303 177 5 23 317 30 332 1.88e-67 214
Msa0057870 MtrunA17_Chr4g0076211 40.134 299 165 5 24 316 42 332 3.05e-67 213
Msa0057870 MtrunA17_Chr2g0292181 38.486 317 187 5 7 316 23 338 5.73e-67 214
Msa0057870 MtrunA17_Chr4g0013191 40.067 297 164 5 27 316 50 339 8.12e-67 213
Msa0057870 MtrunA17_Chr5g0400331 41.776 304 160 8 27 316 30 330 1.36e-66 212
Msa0057870 MtrunA17_Chr4g0038161 37.500 320 186 6 5 316 6 319 1.41e-66 211
Msa0057870 MtrunA17_Chr6g0451571 37.618 319 187 8 7 316 18 333 2.91e-66 211
Msa0057870 MtrunA17_Chr4g0075241 35.938 320 195 6 1 314 9 324 3.09e-66 211
Msa0057870 MtrunA17_Chr3g0106901 41.401 314 171 5 10 317 17 323 4.72e-66 210
Msa0057870 MtrunA17_Chr3g0107881 40.187 321 174 8 7 316 10 323 1.57e-65 209
Msa0057870 MtrunA17_Chr5g0421411 41.544 272 149 5 55 316 13 284 8.37e-65 206
Msa0057870 MtrunA17_Chr6g0467161 36.513 304 178 6 19 316 41 335 6.03e-63 202
Msa0057870 MtrunA17_Chr2g0329641 38.000 300 173 7 23 313 36 331 1.43e-61 199
Msa0057870 MtrunA17_Chr6g0467121 39.535 301 165 7 22 316 73 362 3.51e-61 199
Msa0057870 MtrunA17_Chr2g0316481 35.758 330 176 8 20 313 73 402 2.18e-59 195
Msa0057870 MtrunA17_Chr2g0316791 35.758 330 176 8 20 313 73 402 4.79e-59 194
Msa0057870 MtrunA17_Chr2g0316191 35.650 331 176 8 20 313 73 403 1.15e-58 193
Msa0057870 MtrunA17_Chr2g0316831 35.758 330 176 8 20 313 109 438 1.20e-58 194
Msa0057870 MtrunA17_Chr6g0467251 36.486 296 176 4 23 313 36 324 4.53e-58 190
Msa0057870 MtrunA17_Chr2g0311251 35.435 333 178 6 20 316 8 339 8.62e-57 187
Msa0057870 MtrunA17_Chr1g0181511 34.323 303 187 5 21 316 25 322 4.64e-53 176
Msa0057870 MtrunA17_Chr5g0432401 36.111 324 147 9 7 317 10 286 4.88e-53 175
Msa0057870 MtrunA17_Chr4g0074851 33.022 321 187 7 10 315 19 326 6.44e-51 171
Msa0057870 MtrunA17_Chr2g0311241 31.283 374 179 6 20 316 57 429 1.05e-50 173
Msa0057870 MtrunA17_Chr5g0413051 32.248 307 186 7 23 313 73 373 3.25e-50 171
Msa0057870 MtrunA17_Chr1g0181431 33.663 303 189 5 21 316 25 322 6.25e-50 168
Msa0057870 MtrunA17_Chr1g0181481 32.343 303 193 5 21 316 25 322 1.41e-46 160
Msa0057870 MtrunA17_Chr4g0004591 31.447 318 155 5 23 316 77 355 1.90e-45 157
Msa0057870 MtrunA17_Chr2g0316811 37.143 245 134 4 20 246 47 289 2.61e-44 154
Msa0057870 MtrunA17_Chr3g0114461 42.246 187 94 6 133 313 10 188 5.15e-40 139
Msa0057870 MtrunA17_Chr2g0292281 39.234 209 111 5 114 316 17 215 2.05e-39 139
Msa0057870 MtrunA17_Chr2g0316141 31.915 282 137 9 69 313 11 274 9.51e-34 125
Msa0057870 MtrunA17_Chr2g0316181 31.915 282 137 9 69 313 11 274 9.51e-34 125
Msa0057870 MtrunA17_Chr3g0114491 46.296 108 57 1 23 129 18 125 4.47e-26 100
Msa0057870 MtrunA17_Chr7g0254181 38.406 138 78 2 75 207 12 147 1.24e-25 100
Msa0057870 MtrunA17_Chr5g0432321 41.935 124 63 3 143 265 17 132 1.11e-23 94.4
Msa0057870 MtrunA17_Chr6g0468731 57.143 70 27 1 62 131 22 88 2.13e-21 86.7
Msa0057870 MtrunA17_Chr1g0196191 48.864 88 35 1 53 130 5 92 9.77e-19 81.6
Msa0057870 MtrunA17_Chr3g0104101 35.000 140 83 3 185 316 9 148 2.19e-18 80.5
Msa0057870 MtrunA17_Chr1g0181501 28.643 199 113 7 133 316 4 188 6.02e-18 80.5
Msa0057870 MtrunA17_Chr1g0181491 35.135 111 71 1 21 131 10 119 1.75e-17 78.2
Msa0057870 MtrunA17_Chr4g0037131 27.106 273 132 9 45 302 23 243 1.09e-16 79.0
Msa0057870 MtrunA17_Chr3g0137751 33.918 171 90 6 55 214 106 264 1.68e-16 79.0
Msa0057870 MtrunA17_Chr7g0254171 37.805 82 51 0 68 149 3 84 1.37e-15 72.4
Msa0057870 MtrunA17_Chr2g0316771 26.705 176 96 4 171 313 7 182 2.00e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0057870 AT5G42180.1 72.990 311 82 1 7 317 9 317 2.46e-173 483
Msa0057870 AT5G51890.1 52.941 323 143 4 1 316 1 321 6.70e-123 355
Msa0057870 AT4G33420.1 46.326 313 155 4 5 313 18 321 5.06e-92 277
Msa0057870 AT4G33420.2 46.326 313 155 4 5 313 65 368 3.22e-91 276
Msa0057870 AT1G05260.1 44.340 318 169 6 5 315 7 323 2.45e-90 273
Msa0057870 AT3G21770.1 43.791 306 165 5 16 315 22 326 7.08e-87 264
Msa0057870 AT2G41480.1 44.753 324 157 6 7 316 12 327 1.25e-86 263
Msa0057870 AT5G64120.1 43.667 300 160 6 21 316 33 327 4.84e-86 262
Msa0057870 AT4G36430.1 44.295 298 150 6 27 313 34 326 4.06e-83 254
Msa0057870 AT4G11290.1 40.979 327 179 8 2 316 1 325 4.23e-83 254
Msa0057870 AT5G15180.1 43.366 309 150 6 22 316 31 328 1.45e-82 253
Msa0057870 AT1G05240.1 42.715 302 156 6 23 313 26 321 1.57e-81 250
Msa0057870 AT1G05250.1 42.715 302 156 6 23 313 26 321 1.57e-81 250
Msa0057870 AT2G18980.1 40.373 322 180 5 3 316 5 322 3.02e-81 249
Msa0057870 AT3G01190.1 42.202 327 158 8 1 313 8 317 3.25e-80 246
Msa0057870 AT4G37530.1 43.648 307 160 7 18 313 21 325 6.41e-80 246
Msa0057870 AT4G30170.1 41.503 306 167 5 19 316 23 324 9.97e-80 245
Msa0057870 AT5G14130.1 44.373 311 162 7 11 313 19 326 2.15e-79 245
Msa0057870 AT5G14130.2 44.231 312 163 7 11 314 60 368 5.89e-79 245
Msa0057870 AT2G39040.1 45.574 305 154 7 23 316 46 349 8.76e-79 244
Msa0057870 AT5G39580.1 41.486 323 175 8 1 316 3 318 1.15e-78 243
Msa0057870 AT3G49960.1 42.462 325 170 8 1 313 6 325 1.76e-78 243
Msa0057870 AT5G06720.1 40.625 320 177 7 6 313 11 329 2.19e-78 242
Msa0057870 AT5G19890.1 43.034 323 169 7 5 316 8 326 2.73e-78 242
Msa0057870 AT4G16270.1 44.816 299 159 6 23 316 50 347 4.05e-78 242
Msa0057870 AT4G37520.1 43.522 301 158 6 23 313 27 325 9.35e-78 241
Msa0057870 AT5G17820.1 39.482 309 173 6 10 313 10 309 5.71e-77 238
Msa0057870 AT2G18140.1 43.051 295 160 6 26 313 38 331 2.26e-76 237
Msa0057870 AT4G31760.1 40.127 314 179 4 9 316 15 325 2.70e-76 237
Msa0057870 AT2G18150.1 42.177 294 162 6 27 313 40 332 3.08e-76 237
Msa0057870 AT5G17820.2 39.482 309 173 6 10 313 63 362 9.92e-76 236
Msa0057870 AT5G67400.1 40.498 321 181 5 3 313 5 325 1.37e-75 235
Msa0057870 AT5G05340.1 41.946 298 159 6 23 313 30 320 2.14e-75 234
Msa0057870 AT3G03670.1 36.076 316 197 3 2 313 3 317 3.59e-75 234
Msa0057870 AT1G71695.1 41.830 306 157 7 19 313 40 335 4.15e-75 235
Msa0057870 AT4G37520.2 42.857 301 157 7 23 313 27 322 1.34e-74 232
Msa0057870 AT4G08770.1 42.810 306 160 8 23 316 24 326 2.92e-74 232
Msa0057870 AT1G49570.1 41.311 305 171 5 19 315 44 348 8.13e-74 231
Msa0057870 AT5G06730.1 38.889 324 185 7 6 317 12 334 9.40e-74 231
Msa0057870 AT2G22420.1 37.700 313 191 4 7 316 7 318 1.04e-73 230
Msa0057870 AT3G50990.1 41.830 306 172 4 17 316 35 340 1.88e-73 230
Msa0057870 AT5G66390.1 42.905 296 163 4 27 316 37 332 3.07e-73 229
Msa0057870 AT5G19880.1 42.154 325 174 10 4 316 6 328 3.97e-73 229
Msa0057870 AT4G17690.1 43.144 299 158 6 23 314 26 319 5.19e-73 228
Msa0057870 AT2G24800.1 42.434 304 159 8 23 316 31 328 2.50e-72 227
Msa0057870 AT4G26010.1 38.438 320 179 7 1 315 1 307 2.71e-72 226
Msa0057870 AT4G37530.2 45.977 261 131 6 18 270 21 279 3.92e-72 224
Msa0057870 AT4G25980.1 37.771 323 185 6 1 314 8 323 4.37e-72 226
Msa0057870 AT2G38380.1 40.741 324 181 8 3 316 10 332 4.99e-72 226
Msa0057870 AT1G44970.1 42.997 307 166 6 18 316 40 345 6.05e-72 226
Msa0057870 AT4G08780.1 41.503 306 164 8 23 316 24 326 6.46e-72 226
Msa0057870 AT4G26010.2 38.438 320 179 7 1 315 29 335 6.70e-72 226
Msa0057870 AT3G32980.1 39.938 323 179 9 4 316 16 333 4.91e-71 224
Msa0057870 AT2G38390.1 38.871 319 185 7 7 316 15 332 8.38e-70 221
Msa0057870 AT5G64100.1 40.199 301 162 6 25 316 39 330 2.63e-69 219
Msa0057870 AT4G33870.1 36.336 333 173 4 21 314 66 398 3.37e-69 221
Msa0057870 AT3G49120.1 40.373 322 179 9 5 316 16 334 3.65e-69 219
Msa0057870 AT2G35380.1 40.798 326 178 9 5 316 10 334 9.95e-69 218
Msa0057870 AT5G47000.1 38.438 320 180 7 7 314 13 327 1.34e-68 217
Msa0057870 AT5G64110.1 41.554 296 163 5 27 316 38 329 3.02e-68 216
Msa0057870 AT1G14550.1 37.267 322 187 6 4 316 5 320 3.15e-68 216
Msa0057870 AT1G14540.1 38.291 316 180 8 9 316 6 314 3.85e-68 216
Msa0057870 AT1G68850.1 37.908 306 177 8 23 316 30 334 4.80e-68 216
Msa0057870 AT1G77100.1 39.557 316 174 7 7 313 8 315 1.22e-67 214
Msa0057870 AT5G40150.1 39.274 303 172 6 21 316 30 327 4.05e-67 213
Msa0057870 AT5G58390.1 39.557 316 175 7 7 313 4 312 2.27e-66 211
Msa0057870 AT3G28200.1 38.264 311 163 7 21 316 19 315 3.49e-66 211
Msa0057870 AT3G49110.1 38.080 323 189 8 4 316 14 335 1.16e-65 210
Msa0057870 AT2G34060.1 38.284 303 177 6 23 315 42 344 6.70e-65 208
Msa0057870 AT1G30870.1 38.276 290 170 4 15 302 43 325 9.31e-64 205
Msa0057870 AT5G22410.1 37.846 325 181 11 2 313 5 321 5.29e-63 203
Msa0057870 AT5G58400.1 38.170 317 178 8 7 313 13 321 7.32e-63 202
Msa0057870 AT1G34510.1 36.213 301 175 6 18 313 17 305 2.30e-62 201
Msa0057870 AT2G43480.1 37.417 302 173 8 23 313 35 331 1.05e-58 192
Msa0057870 AT1G24110.1 35.000 320 200 6 2 314 1 319 4.78e-58 190
Msa0057870 AT5G24070.1 35.197 304 181 8 23 315 35 333 9.82e-57 187
Msa0057870 AT3G17070.1 34.868 304 185 5 23 316 38 338 1.82e-56 186
Msa0057870 AT5G39580.2 45.503 189 100 2 1 189 3 188 2.26e-53 175
Msa0057870 AT4G21960.1 33.634 333 186 8 5 315 6 325 7.62e-53 176
Msa0057870 AT4G25980.2 46.471 170 89 1 23 192 71 238 1.79e-52 174
Msa0057870 AT2G24800.2 49.123 171 81 3 23 192 31 196 1.37e-48 163
Msa0057870 AT2G35380.2 43.265 245 126 8 84 316 3 246 2.18e-48 162
Msa0057870 AT2G37130.1 32.450 302 191 6 23 316 30 326 3.30e-46 159
Msa0057870 AT2G37130.2 32.333 300 190 6 25 316 1 295 7.80e-46 157
Msa0057870 AT3G17070.2 32.443 262 163 6 65 316 18 275 2.16e-39 140
Msa0057870 AT4G32320.1 28.037 321 142 12 7 307 74 325 6.73e-19 86.3
Msa0057870 AT4G35970.1 28.520 277 122 9 45 302 21 240 2.43e-16 78.2
Msa0057870 AT4G35970.2 28.794 257 107 9 45 282 21 220 3.70e-14 70.9
Msa0057870 AT3G42570.1 34.615 104 66 1 85 186 44 147 4.49e-11 60.8

Find 77 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGGGAATGAGCATATT+TGG 0.147681 1_2:-14062123 None:intergenic
GAGAGAAGCTTTGTTGTAAT+TGG 0.166362 1_2:-14061693 None:intergenic
CTTGTTTAGGGCTGAATTTA+TGG 0.206407 1_2:-14061893 None:intergenic
TGAATTTATGGATTCTATTT+TGG 0.210139 1_2:-14061881 None:intergenic
GCTTGCAAATGATGGGTTTA+AGG 0.211511 1_2:-14061928 None:intergenic
CTACCATCCTTTCTTCCTTT+TGG 0.218544 1_2:-14061616 None:intergenic
CGTGTCTTGTGCTGATATTT+TGG 0.259261 1_2:+14061148 Msa0057870:CDS
AAGCTCTTTCAAATTCCATT+TGG 0.303757 1_2:-14062139 None:intergenic
TGAAATATGGTATCAACTAT+TGG 0.315933 1_2:+14060690 None:intergenic
CAAGATTTGGTTGCTCTCTC+AGG 0.318920 1_2:+14061733 Msa0057870:CDS
AGGACTTTCCTTGCAAGATT+TGG 0.322053 1_2:+14061720 Msa0057870:CDS
ACGGGTCAACACCTTGTTTA+GGG 0.328269 1_2:-14061905 None:intergenic
AGAGAAGCTTTGTTGTAATT+GGG 0.360077 1_2:-14061692 None:intergenic
AGCTCTTTCAAATTCCATTT+GGG 0.368047 1_2:-14062138 None:intergenic
TGCACTTGCTAGAGAAGTTA+AGG 0.379758 1_2:-14060739 None:intergenic
TAATATGACATTTGCTTTGG+AGG 0.387640 1_2:-14061953 None:intergenic
TTTGGAAACCAATGCTTTAG+TGG 0.389117 1_2:-14062105 None:intergenic
GACGGGTCAACACCTTGTTT+AGG 0.394136 1_2:-14061906 None:intergenic
TGGAGGTTGCTTGCAAATGA+TGG 0.406511 1_2:-14061936 None:intergenic
TATTACAAACTACTACTTCA+AGG 0.421931 1_2:+14062038 Msa0057870:CDS
AATGCATGCAATGATATGTT+TGG 0.428472 1_2:-14061074 None:intergenic
GCATTGGAAGCAGTTTGTCC+AGG 0.436667 1_2:+14061122 Msa0057870:CDS
GGGAAAGAATAAAGCAGAAA+AGG 0.443506 1_2:+14061043 Msa0057870:CDS
CAAATATGCTCATTCCCAAA+TGG 0.448115 1_2:+14062124 Msa0057870:CDS
TATGTAGGAGGTCACACCCT+GGG 0.448707 1_2:+14061837 Msa0057870:intron
ATGTGGCAGTTGAGTCCAAT+GGG 0.454545 1_2:-14062001 None:intergenic
AGTGGGAGCTGGCAATTGTC+TGG 0.471619 1_2:-14061659 None:intergenic
TGCTAGGGATGCTGTCACTC+TGG 0.481519 1_2:+14061178 Msa0057870:CDS
ATGAACAATGTGCAAACCCC+AGG 0.486001 1_2:-14061854 None:intergenic
CAGGTAGACTCCATCGTGGC+TGG 0.491648 1_2:+14060795 Msa0057870:CDS
GTCTGTTCTGTTGAAATCAA+AGG 0.492739 1_2:+14061022 Msa0057870:CDS
TTAGTCTGGAGGGCCAAGTT+GGG 0.493333 1_2:+14061588 Msa0057870:intron
CATGGTGGTGCTCATGATGA+TGG 0.493487 1_2:+14060713 Msa0057870:CDS
ATTAGTCTGGAGGGCCAAGT+TGG 0.498984 1_2:+14061587 Msa0057870:intron
TAATATATGAAGGGGTGTGA+TGG 0.499161 1_2:+14060999 Msa0057870:intron
TCATCCAACCACTAAAGCAT+TGG 0.501090 1_2:+14062097 Msa0057870:CDS
GGAGGTTGCTTGCAAATGAT+GGG 0.501216 1_2:-14061935 None:intergenic
CAAATGATGGGTTTAAGGAC+GGG 0.513605 1_2:-14061923 None:intergenic
TCTGTTCTGTTGAAATCAAA+GGG 0.513793 1_2:+14061023 Msa0057870:CDS
TAATTGGGAGATGTTGAAAG+TGG 0.516813 1_2:-14061677 None:intergenic
GAAACCAATGCTTTAGTGGT+TGG 0.519796 1_2:-14062101 None:intergenic
CCAATGGTGGAAAAGAGATC+AGG 0.521759 1_2:+14062195 Msa0057870:CDS
CATTGGAAGCAGTTTGTCCA+GGG 0.522226 1_2:+14061123 Msa0057870:CDS
TCAGCACAAGACACGACCCC+TGG 0.525663 1_2:-14061140 None:intergenic
ATAAGCATTGTCAAAATATG+TGG 0.528552 1_2:-14062018 None:intergenic
AATATATGAAGGGGTGTGAT+GGG 0.529898 1_2:+14061000 Msa0057870:intron
GGAAGTACCAAAAGGAAGAA+AGG 0.531148 1_2:+14061609 Msa0057870:CDS
CTATGAGCATACATGTCCTC+AGG 0.533702 1_2:+14060776 Msa0057870:CDS
TGCATGCGAAGCAGAGCTGA+TGG 0.535374 1_2:-14060855 None:intergenic
TGAGAACGCTAAGAAAGCAT+TGG 0.540855 1_2:+14061106 Msa0057870:CDS
AAGAATAAAGCAGAAAAGGA+TGG 0.545325 1_2:+14061047 Msa0057870:CDS
CAACAAAGCTTCTCTCAAAG+AGG 0.549993 1_2:+14061700 Msa0057870:CDS
GCAAATGATGGGTTTAAGGA+CGG 0.553010 1_2:-14061924 None:intergenic
ATGAGTAGCATCACCAATGG+TGG 0.560539 1_2:+14062182 Msa0057870:CDS
TGTGAGTGGCATTAGTCTGG+AGG 0.564494 1_2:+14061577 Msa0057870:intron
GTGAGTGGCATTAGTCTGGA+GGG 0.578114 1_2:+14061578 Msa0057870:intron
ATCATCTAACGAGATTACAT+TGG 0.588718 1_2:-14062220 None:intergenic
CATAAATTCAGCCCTAAACA+AGG 0.590505 1_2:+14061894 Msa0057870:CDS
CCAAGTTGGGAAGTACCAAA+AGG 0.591992 1_2:+14061601 Msa0057870:CDS
TATGTGGCAGTTGAGTCCAA+TGG 0.599988 1_2:-14062002 None:intergenic
GTACCAAAAGGAAGAAAGGA+TGG 0.602460 1_2:+14061613 Msa0057870:CDS
AAAGGATGGTAGAATCTCAA+AGG 0.603107 1_2:+14061627 Msa0057870:CDS
ATGTAGGAGGTCACACCCTG+GGG 0.603228 1_2:+14061838 Msa0057870:intron
TATGGTATCAACTATTGGCA+TGG 0.604185 1_2:+14060695 None:intergenic
GAGAGCAACCAAATCTTGCA+AGG 0.622104 1_2:-14061728 None:intergenic
GCATGCAATGATATGTTTGG+AGG 0.631708 1_2:-14061071 None:intergenic
GAGATGTTGAAAGTGGGAGC+TGG 0.642062 1_2:-14061670 None:intergenic
AAAATGAGTAGCATCACCAA+TGG 0.654023 1_2:+14062179 Msa0057870:CDS
AATTGGGAGATGTTGAAAGT+GGG 0.657381 1_2:-14061676 None:intergenic
TGAACAATGTGCAAACCCCA+GGG 0.660257 1_2:-14061853 None:intergenic
ATTGGAAGCAGTTTGTCCAG+GGG 0.679665 1_2:+14061124 Msa0057870:CDS
TTATGTAGGAGGTCACACCC+TGG 0.680699 1_2:+14061836 Msa0057870:intron
GTGTACTGCACCAGCCACGA+TGG 0.698358 1_2:-14060805 None:intergenic
GGTATCAACTATTGGCATGG+TGG 0.708481 1_2:+14060698 Msa0057870:CDS
GCCACGATGGAGTCTACCTG+AGG 0.712283 1_2:-14060792 None:intergenic
TCCTCAGGTAGACTCCATCG+TGG 0.718540 1_2:+14060791 Msa0057870:CDS
TGTGGCAGTTGAGTCCAATG+GGG 0.768538 1_2:-14062000 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAATTAATTAATA+TGG + chr1_2:14061470-14061489 Msa0057870:intron 0.0%
!! AATTAATTAATTAATTAATA+TGG + chr1_2:14061470-14061489 Msa0057870:intron 0.0%
!! TATATATATAATATATGAAG+GGG + chr1_2:14060991-14061010 Msa0057870:intron 10.0%
!!! TATATGAATTATGATAATTT+TGG + chr1_2:14061339-14061358 Msa0057870:intron 10.0%
!! TATATATATAATATATGAAG+GGG + chr1_2:14060991-14061010 Msa0057870:intron 10.0%
!!! TATATGAATTATGATAATTT+TGG + chr1_2:14061339-14061358 Msa0057870:intron 10.0%
!!! ATGATGTTATATTTTTATGT+AGG + chr1_2:14061822-14061841 Msa0057870:intron 15.0%
!!! ATGATGTTATATTTTTATGT+AGG + chr1_2:14061822-14061841 Msa0057870:intron 15.0%
!! TTATGTTTAAGTAACATTTC+TGG + chr1_2:14061295-14061314 Msa0057870:intron 20.0%
!!! ATGTTATATTTTTATGTAGG+AGG + chr1_2:14061825-14061844 Msa0057870:intron 20.0%
!!! TGAATTTATGGATTCTATTT+TGG - chr1_2:14061884-14061903 None:intergenic 20.0%
!!! TTTTAATATGACATTTGCTT+TGG - chr1_2:14061959-14061978 None:intergenic 20.0%
!! CAAATGTCATATTAAAAACA+AGG + chr1_2:14061962-14061981 Msa0057870:CDS 20.0%
!! TTATGTTTAAGTAACATTTC+TGG + chr1_2:14061295-14061314 Msa0057870:intron 20.0%
!!! ATGTTATATTTTTATGTAGG+AGG + chr1_2:14061825-14061844 Msa0057870:intron 20.0%
!!! TGAATTTATGGATTCTATTT+TGG - chr1_2:14061884-14061903 None:intergenic 20.0%
!!! TTTTAATATGACATTTGCTT+TGG - chr1_2:14061959-14061978 None:intergenic 20.0%
!! CAAATGTCATATTAAAAACA+AGG + chr1_2:14061962-14061981 Msa0057870:CDS 20.0%
!! ATTTTCATGATTGCTTCATA+AGG + chr1_2:14060877-14060896 Msa0057870:CDS 25.0%
!! TTTTCATGATTGCTTCATAA+GGG + chr1_2:14060878-14060897 Msa0057870:CDS 25.0%
!! TCCACTAACTAATTTTGAAT+TGG + chr1_2:14061552-14061571 Msa0057870:intron 25.0%
!! CCACTAACTAATTTTGAATT+GGG + chr1_2:14061553-14061572 Msa0057870:intron 25.0%
!!! TTTATGGATTCTATTTTGGA+AGG - chr1_2:14061880-14061899 None:intergenic 25.0%
!! ATAAGCATTGTCAAAATATG+TGG - chr1_2:14062021-14062040 None:intergenic 25.0%
! TATTACAAACTACTACTTCA+AGG + chr1_2:14062038-14062057 Msa0057870:CDS 25.0%
!! ATTTTCATGATTGCTTCATA+AGG + chr1_2:14060877-14060896 Msa0057870:CDS 25.0%
!! TTTTCATGATTGCTTCATAA+GGG + chr1_2:14060878-14060897 Msa0057870:CDS 25.0%
!! TCCACTAACTAATTTTGAAT+TGG + chr1_2:14061552-14061571 Msa0057870:intron 25.0%
!! CCACTAACTAATTTTGAATT+GGG + chr1_2:14061553-14061572 Msa0057870:intron 25.0%
!!! TTTATGGATTCTATTTTGGA+AGG - chr1_2:14061880-14061899 None:intergenic 25.0%
!! ATAAGCATTGTCAAAATATG+TGG - chr1_2:14062021-14062040 None:intergenic 25.0%
! TATTACAAACTACTACTTCA+AGG + chr1_2:14062038-14062057 Msa0057870:CDS 25.0%
TCTGTTCTGTTGAAATCAAA+GGG + chr1_2:14061023-14061042 Msa0057870:CDS 30.0%
AAGAATAAAGCAGAAAAGGA+TGG + chr1_2:14061047-14061066 Msa0057870:CDS 30.0%
AATGCATGCAATGATATGTT+TGG - chr1_2:14061077-14061096 None:intergenic 30.0%
ACCTAACTACATGATTGATT+TGG + chr1_2:14061374-14061393 Msa0057870:intron 30.0%
! CCTAACTACATGATTGATTT+GGG + chr1_2:14061375-14061394 Msa0057870:intron 30.0%
TATAGTATTATACATGTCCG+AGG - chr1_2:14061425-14061444 None:intergenic 30.0%
CCCAATTCAAAATTAGTTAG+TGG - chr1_2:14061556-14061575 None:intergenic 30.0%
!! AGAGAAGCTTTGTTGTAATT+GGG - chr1_2:14061695-14061714 None:intergenic 30.0%
TAATATGACATTTGCTTTGG+AGG - chr1_2:14061956-14061975 None:intergenic 30.0%
AAAAACAAGGTGAAAAATGC+AGG + chr1_2:14061975-14061994 Msa0057870:CDS 30.0%
AAAACAAGGTGAAAAATGCA+GGG + chr1_2:14061976-14061995 Msa0057870:CDS 30.0%
AGCTCTTTCAAATTCCATTT+GGG - chr1_2:14062141-14062160 None:intergenic 30.0%
AAGCTCTTTCAAATTCCATT+TGG - chr1_2:14062142-14062161 None:intergenic 30.0%
TCTGTTCTGTTGAAATCAAA+GGG + chr1_2:14061023-14061042 Msa0057870:CDS 30.0%
AAGAATAAAGCAGAAAAGGA+TGG + chr1_2:14061047-14061066 Msa0057870:CDS 30.0%
AATGCATGCAATGATATGTT+TGG - chr1_2:14061077-14061096 None:intergenic 30.0%
ACCTAACTACATGATTGATT+TGG + chr1_2:14061374-14061393 Msa0057870:intron 30.0%
! CCTAACTACATGATTGATTT+GGG + chr1_2:14061375-14061394 Msa0057870:intron 30.0%
TATAGTATTATACATGTCCG+AGG - chr1_2:14061425-14061444 None:intergenic 30.0%
CCCAATTCAAAATTAGTTAG+TGG - chr1_2:14061556-14061575 None:intergenic 30.0%
!! AGAGAAGCTTTGTTGTAATT+GGG - chr1_2:14061695-14061714 None:intergenic 30.0%
TAATATGACATTTGCTTTGG+AGG - chr1_2:14061956-14061975 None:intergenic 30.0%
AAAAACAAGGTGAAAAATGC+AGG + chr1_2:14061975-14061994 Msa0057870:CDS 30.0%
AAAACAAGGTGAAAAATGCA+GGG + chr1_2:14061976-14061995 Msa0057870:CDS 30.0%
AGCTCTTTCAAATTCCATTT+GGG - chr1_2:14062141-14062160 None:intergenic 30.0%
AAGCTCTTTCAAATTCCATT+TGG - chr1_2:14062142-14062161 None:intergenic 30.0%
! TGGAACTGTTTTGTCATTCA+TGG - chr1_2:14060838-14060857 None:intergenic 35.0%
! TAATATATGAAGGGGTGTGA+TGG + chr1_2:14060999-14061018 Msa0057870:intron 35.0%
! AATATATGAAGGGGTGTGAT+GGG + chr1_2:14061000-14061019 Msa0057870:intron 35.0%
GTCTGTTCTGTTGAAATCAA+AGG + chr1_2:14061022-14061041 Msa0057870:CDS 35.0%
GGGAAAGAATAAAGCAGAAA+AGG + chr1_2:14061043-14061062 Msa0057870:CDS 35.0%
CCCAAATCAATCATGTAGTT+AGG - chr1_2:14061378-14061397 None:intergenic 35.0%
!! TACATGATTGATTTGGGCTT+AGG + chr1_2:14061381-14061400 Msa0057870:intron 35.0%
!!! TGGGCTTAGGAGTTTTAATT+TGG + chr1_2:14061394-14061413 Msa0057870:intron 35.0%
!!! GGGCTTAGGAGTTTTAATTT+GGG + chr1_2:14061395-14061414 Msa0057870:intron 35.0%
!!! GTTTTAATTTGGGTTGTCCT+CGG + chr1_2:14061405-14061424 Msa0057870:intron 35.0%
!! ATTTTGAATTGGGTTGTGAG+TGG + chr1_2:14061563-14061582 Msa0057870:intron 35.0%
AAAGGATGGTAGAATCTCAA+AGG + chr1_2:14061627-14061646 Msa0057870:CDS 35.0%
AATTGGGAGATGTTGAAAGT+GGG - chr1_2:14061679-14061698 None:intergenic 35.0%
TAATTGGGAGATGTTGAAAG+TGG - chr1_2:14061680-14061699 None:intergenic 35.0%
!! GAGAGAAGCTTTGTTGTAAT+TGG - chr1_2:14061696-14061715 None:intergenic 35.0%
! CTTGTTTAGGGCTGAATTTA+TGG - chr1_2:14061896-14061915 None:intergenic 35.0%
CATAAATTCAGCCCTAAACA+AGG + chr1_2:14061894-14061913 Msa0057870:CDS 35.0%
TTTGGAAACCAATGCTTTAG+TGG - chr1_2:14062108-14062127 None:intergenic 35.0%
CATTTGGGAATGAGCATATT+TGG - chr1_2:14062126-14062145 None:intergenic 35.0%
CAAATATGCTCATTCCCAAA+TGG + chr1_2:14062124-14062143 Msa0057870:CDS 35.0%
!! GATGCTACTCATTTTGATCA+TGG - chr1_2:14062174-14062193 None:intergenic 35.0%
AAAATGAGTAGCATCACCAA+TGG + chr1_2:14062179-14062198 Msa0057870:CDS 35.0%
! TGGAACTGTTTTGTCATTCA+TGG - chr1_2:14060838-14060857 None:intergenic 35.0%
! TAATATATGAAGGGGTGTGA+TGG + chr1_2:14060999-14061018 Msa0057870:intron 35.0%
! AATATATGAAGGGGTGTGAT+GGG + chr1_2:14061000-14061019 Msa0057870:intron 35.0%
GTCTGTTCTGTTGAAATCAA+AGG + chr1_2:14061022-14061041 Msa0057870:CDS 35.0%
GGGAAAGAATAAAGCAGAAA+AGG + chr1_2:14061043-14061062 Msa0057870:CDS 35.0%
CCCAAATCAATCATGTAGTT+AGG - chr1_2:14061378-14061397 None:intergenic 35.0%
!! TACATGATTGATTTGGGCTT+AGG + chr1_2:14061381-14061400 Msa0057870:intron 35.0%
!!! TGGGCTTAGGAGTTTTAATT+TGG + chr1_2:14061394-14061413 Msa0057870:intron 35.0%
!!! GGGCTTAGGAGTTTTAATTT+GGG + chr1_2:14061395-14061414 Msa0057870:intron 35.0%
!!! GTTTTAATTTGGGTTGTCCT+CGG + chr1_2:14061405-14061424 Msa0057870:intron 35.0%
!! ATTTTGAATTGGGTTGTGAG+TGG + chr1_2:14061563-14061582 Msa0057870:intron 35.0%
AAAGGATGGTAGAATCTCAA+AGG + chr1_2:14061627-14061646 Msa0057870:CDS 35.0%
AATTGGGAGATGTTGAAAGT+GGG - chr1_2:14061679-14061698 None:intergenic 35.0%
TAATTGGGAGATGTTGAAAG+TGG - chr1_2:14061680-14061699 None:intergenic 35.0%
!! GAGAGAAGCTTTGTTGTAAT+TGG - chr1_2:14061696-14061715 None:intergenic 35.0%
! CTTGTTTAGGGCTGAATTTA+TGG - chr1_2:14061896-14061915 None:intergenic 35.0%
CATAAATTCAGCCCTAAACA+AGG + chr1_2:14061894-14061913 Msa0057870:CDS 35.0%
TTTGGAAACCAATGCTTTAG+TGG - chr1_2:14062108-14062127 None:intergenic 35.0%
CATTTGGGAATGAGCATATT+TGG - chr1_2:14062126-14062145 None:intergenic 35.0%
CAAATATGCTCATTCCCAAA+TGG + chr1_2:14062124-14062143 Msa0057870:CDS 35.0%
!! GATGCTACTCATTTTGATCA+TGG - chr1_2:14062174-14062193 None:intergenic 35.0%
AAAATGAGTAGCATCACCAA+TGG + chr1_2:14062179-14062198 Msa0057870:CDS 35.0%
! TGCACTTGCTAGAGAAGTTA+AGG - chr1_2:14060742-14060761 None:intergenic 40.0%
GCATGCAATGATATGTTTGG+AGG - chr1_2:14061074-14061093 None:intergenic 40.0%
! TGAGAACGCTAAGAAAGCAT+TGG + chr1_2:14061106-14061125 Msa0057870:CDS 40.0%
!! CGTGTCTTGTGCTGATATTT+TGG + chr1_2:14061148-14061167 Msa0057870:CDS 40.0%
!!! ATATTTTGGCTCTTGCTGCT+AGG + chr1_2:14061162-14061181 Msa0057870:CDS 40.0%
!!! TATTTTGGCTCTTGCTGCTA+GGG + chr1_2:14061163-14061182 Msa0057870:CDS 40.0%
ATGTTCACGCGAGAAGTAAA+TGG - chr1_2:14061243-14061262 None:intergenic 40.0%
!! GGAAGTACCAAAAGGAAGAA+AGG + chr1_2:14061609-14061628 Msa0057870:CDS 40.0%
GTACCAAAAGGAAGAAAGGA+TGG + chr1_2:14061613-14061632 Msa0057870:CDS 40.0%
! CTACCATCCTTTCTTCCTTT+TGG - chr1_2:14061619-14061638 None:intergenic 40.0%
CAACAAAGCTTCTCTCAAAG+AGG + chr1_2:14061700-14061719 Msa0057870:CDS 40.0%
AGGACTTTCCTTGCAAGATT+TGG + chr1_2:14061720-14061739 Msa0057870:CDS 40.0%
!! CAAATGATGGGTTTAAGGAC+GGG - chr1_2:14061926-14061945 None:intergenic 40.0%
!! GCAAATGATGGGTTTAAGGA+CGG - chr1_2:14061927-14061946 None:intergenic 40.0%
!! GCTTGCAAATGATGGGTTTA+AGG - chr1_2:14061931-14061950 None:intergenic 40.0%
TCATCCAACCACTAAAGCAT+TGG + chr1_2:14062097-14062116 Msa0057870:CDS 40.0%
GAAACCAATGCTTTAGTGGT+TGG - chr1_2:14062104-14062123 None:intergenic 40.0%
! TGCACTTGCTAGAGAAGTTA+AGG - chr1_2:14060742-14060761 None:intergenic 40.0%
GCATGCAATGATATGTTTGG+AGG - chr1_2:14061074-14061093 None:intergenic 40.0%
! TGAGAACGCTAAGAAAGCAT+TGG + chr1_2:14061106-14061125 Msa0057870:CDS 40.0%
!! CGTGTCTTGTGCTGATATTT+TGG + chr1_2:14061148-14061167 Msa0057870:CDS 40.0%
!!! ATATTTTGGCTCTTGCTGCT+AGG + chr1_2:14061162-14061181 Msa0057870:CDS 40.0%
!!! TATTTTGGCTCTTGCTGCTA+GGG + chr1_2:14061163-14061182 Msa0057870:CDS 40.0%
ATGTTCACGCGAGAAGTAAA+TGG - chr1_2:14061243-14061262 None:intergenic 40.0%
!! GGAAGTACCAAAAGGAAGAA+AGG + chr1_2:14061609-14061628 Msa0057870:CDS 40.0%
GTACCAAAAGGAAGAAAGGA+TGG + chr1_2:14061613-14061632 Msa0057870:CDS 40.0%
! CTACCATCCTTTCTTCCTTT+TGG - chr1_2:14061619-14061638 None:intergenic 40.0%
CAACAAAGCTTCTCTCAAAG+AGG + chr1_2:14061700-14061719 Msa0057870:CDS 40.0%
AGGACTTTCCTTGCAAGATT+TGG + chr1_2:14061720-14061739 Msa0057870:CDS 40.0%
!! CAAATGATGGGTTTAAGGAC+GGG - chr1_2:14061926-14061945 None:intergenic 40.0%
!! GCAAATGATGGGTTTAAGGA+CGG - chr1_2:14061927-14061946 None:intergenic 40.0%
!! GCTTGCAAATGATGGGTTTA+AGG - chr1_2:14061931-14061950 None:intergenic 40.0%
TCATCCAACCACTAAAGCAT+TGG + chr1_2:14062097-14062116 Msa0057870:CDS 40.0%
GAAACCAATGCTTTAGTGGT+TGG - chr1_2:14062104-14062123 None:intergenic 40.0%
GGTATCAACTATTGGCATGG+TGG + chr1_2:14060698-14060717 Msa0057870:CDS 45.0%
CTATGAGCATACATGTCCTC+AGG + chr1_2:14060776-14060795 Msa0057870:CDS 45.0%
CATTGGAAGCAGTTTGTCCA+GGG + chr1_2:14061123-14061142 Msa0057870:CDS 45.0%
ATTGGAAGCAGTTTGTCCAG+GGG + chr1_2:14061124-14061143 Msa0057870:CDS 45.0%
! CCTTTTGGTACTTCCCAACT+TGG - chr1_2:14061604-14061623 None:intergenic 45.0%
!! CCAAGTTGGGAAGTACCAAA+AGG + chr1_2:14061601-14061620 Msa0057870:CDS 45.0%
GAGAGCAACCAAATCTTGCA+AGG - chr1_2:14061731-14061750 None:intergenic 45.0%
! CAAGATTTGGTTGCTCTCTC+AGG + chr1_2:14061733-14061752 Msa0057870:CDS 45.0%
TGAACAATGTGCAAACCCCA+GGG - chr1_2:14061856-14061875 None:intergenic 45.0%
ATGAACAATGTGCAAACCCC+AGG - chr1_2:14061857-14061876 None:intergenic 45.0%
! ACGGGTCAACACCTTGTTTA+GGG - chr1_2:14061908-14061927 None:intergenic 45.0%
GGAGGTTGCTTGCAAATGAT+GGG - chr1_2:14061938-14061957 None:intergenic 45.0%
TGGAGGTTGCTTGCAAATGA+TGG - chr1_2:14061939-14061958 None:intergenic 45.0%
ATGTGGCAGTTGAGTCCAAT+GGG - chr1_2:14062004-14062023 None:intergenic 45.0%
TATGTGGCAGTTGAGTCCAA+TGG - chr1_2:14062005-14062024 None:intergenic 45.0%
ATGAGTAGCATCACCAATGG+TGG + chr1_2:14062182-14062201 Msa0057870:CDS 45.0%
! CCTGATCTCTTTTCCACCAT+TGG - chr1_2:14062198-14062217 None:intergenic 45.0%
! CCAATGGTGGAAAAGAGATC+AGG + chr1_2:14062195-14062214 Msa0057870:CDS 45.0%
GGTATCAACTATTGGCATGG+TGG + chr1_2:14060698-14060717 Msa0057870:CDS 45.0%
CTATGAGCATACATGTCCTC+AGG + chr1_2:14060776-14060795 Msa0057870:CDS 45.0%
CATTGGAAGCAGTTTGTCCA+GGG + chr1_2:14061123-14061142 Msa0057870:CDS 45.0%
ATTGGAAGCAGTTTGTCCAG+GGG + chr1_2:14061124-14061143 Msa0057870:CDS 45.0%
! CCTTTTGGTACTTCCCAACT+TGG - chr1_2:14061604-14061623 None:intergenic 45.0%
!! CCAAGTTGGGAAGTACCAAA+AGG + chr1_2:14061601-14061620 Msa0057870:CDS 45.0%
GAGAGCAACCAAATCTTGCA+AGG - chr1_2:14061731-14061750 None:intergenic 45.0%
! CAAGATTTGGTTGCTCTCTC+AGG + chr1_2:14061733-14061752 Msa0057870:CDS 45.0%
TGAACAATGTGCAAACCCCA+GGG - chr1_2:14061856-14061875 None:intergenic 45.0%
ATGAACAATGTGCAAACCCC+AGG - chr1_2:14061857-14061876 None:intergenic 45.0%
! ACGGGTCAACACCTTGTTTA+GGG - chr1_2:14061908-14061927 None:intergenic 45.0%
GGAGGTTGCTTGCAAATGAT+GGG - chr1_2:14061938-14061957 None:intergenic 45.0%
TGGAGGTTGCTTGCAAATGA+TGG - chr1_2:14061939-14061958 None:intergenic 45.0%
ATGTGGCAGTTGAGTCCAAT+GGG - chr1_2:14062004-14062023 None:intergenic 45.0%
TATGTGGCAGTTGAGTCCAA+TGG - chr1_2:14062005-14062024 None:intergenic 45.0%
ATGAGTAGCATCACCAATGG+TGG + chr1_2:14062182-14062201 Msa0057870:CDS 45.0%
! CCTGATCTCTTTTCCACCAT+TGG - chr1_2:14062198-14062217 None:intergenic 45.0%
! CCAATGGTGGAAAAGAGATC+AGG + chr1_2:14062195-14062214 Msa0057870:CDS 45.0%
!! TATATATATATAATATATGA+AGG + chr1_2:14060989-14061008 Msa0057870:intron 5.0%
!! ATATATATATAATATATGAA+GGG + chr1_2:14060990-14061009 Msa0057870:intron 5.0%
!! TATTACTTAAAAAATTAAAA+TGG + chr1_2:14061527-14061546 Msa0057870:intron 5.0%
!! TATATATATATAATATATGA+AGG + chr1_2:14060989-14061008 Msa0057870:intron 5.0%
!! ATATATATATAATATATGAA+GGG + chr1_2:14060990-14061009 Msa0057870:intron 5.0%
!! TATTACTTAAAAAATTAAAA+TGG + chr1_2:14061527-14061546 Msa0057870:intron 5.0%
! CATGGTGGTGCTCATGATGA+TGG + chr1_2:14060713-14060732 Msa0057870:CDS 50.0%
GCATTGGAAGCAGTTTGTCC+AGG + chr1_2:14061122-14061141 Msa0057870:CDS 50.0%
GGTTGTGAGTGGCATTAGTC+TGG + chr1_2:14061574-14061593 Msa0057870:intron 50.0%
! TGTGAGTGGCATTAGTCTGG+AGG + chr1_2:14061577-14061596 Msa0057870:intron 50.0%
! GTGAGTGGCATTAGTCTGGA+GGG + chr1_2:14061578-14061597 Msa0057870:intron 50.0%
! ATTAGTCTGGAGGGCCAAGT+TGG + chr1_2:14061587-14061606 Msa0057870:intron 50.0%
TTAGTCTGGAGGGCCAAGTT+GGG + chr1_2:14061588-14061607 Msa0057870:intron 50.0%
GAGATGTTGAAAGTGGGAGC+TGG - chr1_2:14061673-14061692 None:intergenic 50.0%
TTATGTAGGAGGTCACACCC+TGG + chr1_2:14061836-14061855 Msa0057870:intron 50.0%
TATGTAGGAGGTCACACCCT+GGG + chr1_2:14061837-14061856 Msa0057870:intron 50.0%
! GACGGGTCAACACCTTGTTT+AGG - chr1_2:14061909-14061928 None:intergenic 50.0%
GAAAAATGCAGGGTCCCCAT+TGG + chr1_2:14061986-14062005 Msa0057870:CDS 50.0%
TGTGGCAGTTGAGTCCAATG+GGG - chr1_2:14062003-14062022 None:intergenic 50.0%
! CATGGTGGTGCTCATGATGA+TGG + chr1_2:14060713-14060732 Msa0057870:CDS 50.0%
GCATTGGAAGCAGTTTGTCC+AGG + chr1_2:14061122-14061141 Msa0057870:CDS 50.0%
GGTTGTGAGTGGCATTAGTC+TGG + chr1_2:14061574-14061593 Msa0057870:intron 50.0%
! TGTGAGTGGCATTAGTCTGG+AGG + chr1_2:14061577-14061596 Msa0057870:intron 50.0%
! GTGAGTGGCATTAGTCTGGA+GGG + chr1_2:14061578-14061597 Msa0057870:intron 50.0%
! ATTAGTCTGGAGGGCCAAGT+TGG + chr1_2:14061587-14061606 Msa0057870:intron 50.0%
TTAGTCTGGAGGGCCAAGTT+GGG + chr1_2:14061588-14061607 Msa0057870:intron 50.0%
GAGATGTTGAAAGTGGGAGC+TGG - chr1_2:14061673-14061692 None:intergenic 50.0%
TTATGTAGGAGGTCACACCC+TGG + chr1_2:14061836-14061855 Msa0057870:intron 50.0%
TATGTAGGAGGTCACACCCT+GGG + chr1_2:14061837-14061856 Msa0057870:intron 50.0%
! GACGGGTCAACACCTTGTTT+AGG - chr1_2:14061909-14061928 None:intergenic 50.0%
GAAAAATGCAGGGTCCCCAT+TGG + chr1_2:14061986-14062005 Msa0057870:CDS 50.0%
TGTGGCAGTTGAGTCCAATG+GGG - chr1_2:14062003-14062022 None:intergenic 50.0%
TCCTCAGGTAGACTCCATCG+TGG + chr1_2:14060791-14060810 Msa0057870:CDS 55.0%
TGCATGCGAAGCAGAGCTGA+TGG - chr1_2:14060858-14060877 None:intergenic 55.0%
TGCTAGGGATGCTGTCACTC+TGG + chr1_2:14061178-14061197 Msa0057870:CDS 55.0%
AGTGGGAGCTGGCAATTGTC+TGG - chr1_2:14061662-14061681 None:intergenic 55.0%
ATGTAGGAGGTCACACCCTG+GGG + chr1_2:14061838-14061857 Msa0057870:intron 55.0%
TCCTCAGGTAGACTCCATCG+TGG + chr1_2:14060791-14060810 Msa0057870:CDS 55.0%
TGCATGCGAAGCAGAGCTGA+TGG - chr1_2:14060858-14060877 None:intergenic 55.0%
TGCTAGGGATGCTGTCACTC+TGG + chr1_2:14061178-14061197 Msa0057870:CDS 55.0%
AGTGGGAGCTGGCAATTGTC+TGG - chr1_2:14061662-14061681 None:intergenic 55.0%
ATGTAGGAGGTCACACCCTG+GGG + chr1_2:14061838-14061857 Msa0057870:intron 55.0%
GCCACGATGGAGTCTACCTG+AGG - chr1_2:14060795-14060814 None:intergenic 60.0%
CAGGTAGACTCCATCGTGGC+TGG + chr1_2:14060795-14060814 Msa0057870:CDS 60.0%
GTGTACTGCACCAGCCACGA+TGG - chr1_2:14060808-14060827 None:intergenic 60.0%
TCAGCACAAGACACGACCCC+TGG - chr1_2:14061143-14061162 None:intergenic 60.0%
GCCACGATGGAGTCTACCTG+AGG - chr1_2:14060795-14060814 None:intergenic 60.0%
CAGGTAGACTCCATCGTGGC+TGG + chr1_2:14060795-14060814 Msa0057870:CDS 60.0%
GTGTACTGCACCAGCCACGA+TGG - chr1_2:14060808-14060827 None:intergenic 60.0%
TCAGCACAAGACACGACCCC+TGG - chr1_2:14061143-14061162 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 14060696 14062241 14060696 ID=Msa0057870;Name=Msa0057870
chr1_2 mRNA 14060696 14062241 14060696 ID=Msa0057870-mRNA-1;Parent=Msa0057870;Name=Msa0057870-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|4|0|317
chr1_2 exon 14060696 14060899 14060696 ID=Msa0057870-mRNA-1:exon:5585;Parent=Msa0057870-mRNA-1
chr1_2 exon 14061011 14061199 14061011 ID=Msa0057870-mRNA-1:exon:5586;Parent=Msa0057870-mRNA-1
chr1_2 exon 14061592 14061754 14061592 ID=Msa0057870-mRNA-1:exon:5587;Parent=Msa0057870-mRNA-1
chr1_2 exon 14061844 14062241 14061844 ID=Msa0057870-mRNA-1:exon:5588;Parent=Msa0057870-mRNA-1
chr1_2 CDS 14060696 14060899 14060696 ID=Msa0057870-mRNA-1:cds;Parent=Msa0057870-mRNA-1
chr1_2 CDS 14061011 14061199 14061011 ID=Msa0057870-mRNA-1:cds;Parent=Msa0057870-mRNA-1
chr1_2 CDS 14061592 14061754 14061592 ID=Msa0057870-mRNA-1:cds;Parent=Msa0057870-mRNA-1
chr1_2 CDS 14061844 14062241 14061844 ID=Msa0057870-mRNA-1:cds;Parent=Msa0057870-mRNA-1
Gene Sequence

>Msa0057870

ATGGTATCAACTATTGGCATGGTGGTGCTCATGATGATGGTGTCCTTAACTTCTCTAGCAAGTGCATTAAGTGTGAATTACTATGAGCATACATGTCCTCAGGTAGACTCCATCGTGGCTGGTGCAGTACACAAAGCAACCATGAATGACAAAACAGTTCCATCAGCTCTGCTTCGCATGCATTTTCATGATTGCTTCATAAGGGGGTGTGATGGGTCTGTTCTGTTGAAATCAAAGGGAAAGAATAAAGCAGAAAAGGATGGACCTCCAAACATATCATTGCATGCATTTTATGTAATTGAGAACGCTAAGAAAGCATTGGAAGCAGTTTGTCCAGGGGTCGTGTCTTGTGCTGATATTTTGGCTCTTGCTGCTAGGGATGCTGTCACTCTGTCTGGAGGGCCAAGTTGGGAAGTACCAAAAGGAAGAAAGGATGGTAGAATCTCAAAGGCTACTGAAACCAGACAATTGCCAGCTCCCACTTTCAACATCTCCCAATTACAACAAAGCTTCTCTCAAAGAGGACTTTCCTTGCAAGATTTGGTTGCTCTCTCAGGAGGTCACACCCTGGGGTTTGCACATTGTTCATCCTTCCAAAATAGAATCCATAAATTCAGCCCTAAACAAGGTGTTGACCCGTCCTTAAACCCATCATTTGCAAGCAACCTCCAAAGCAAATGTCATATTAAAAACAAGGTGAAAAATGCAGGGTCCCCATTGGACTCAACTGCCACATATTTTGACAATGCTTATTACAAACTACTACTTCAAGGAAAAAGCATACTCTCTTCTGATCAAGCTCTACTTACTCATCCAACCACTAAAGCATTGGTTTCCAAATATGCTCATTCCCAAATGGAATTTGAAAGAGCTTTTGTCAAATCCATGATCAAAATGAGTAGCATCACCAATGGTGGAAAAGAGATCAGGCTCCAATGTAATCTCGTTAGATGA
Protein sequence

>Msa0057870

MVSTIGMVVLMMMVSLTSLASALSVNYYEHTCPQVDSIVAGAVHKATMNDKTVPSALLRMHFHDCFIRGCDGSVLLKSKGKNKAEKDGPPNISLHAFYVIENAKKALEAVCPGVVSCADILALAARDAVTLSGGPSWEVPKGRKDGRISKATETRQLPAPTFNISQLQQSFSQRGLSLQDLVALSGGHTLGFAHCSSFQNRIHKFSPKQGVDPSLNPSFASNLQSKCHIKNKVKNAGSPLDSTATYFDNAYYKLLLQGKSILSSDQALLTHPTTKALVSKYAHSQMEFERAFVKSMIKMSSITNGGKEIRLQCNLVR*