Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099890 | sp|Q3S4A7|AHK5_ARATH | 50.927 | 1025 | 314 | 21 | 1 | 940 | 1 | 921 | 0.0 | 900 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099890 | G7I7J7 | 91.592 | 1011 | 14 | 3 | 1 | 940 | 1 | 1011 | 0.0 | 1846 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0099890 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa0099890 | 0.815013 | 1.148844e-51 | -8.615850e-47 |
| Msa0005560 | Msa0099890 | 0.927963 | 5.638619e-92 | -8.615850e-47 |
| Msa0007870 | Msa0099890 | 0.807973 | 3.891547e-50 | -8.615850e-47 |
| Msa0011010 | Msa0099890 | 0.801862 | 7.369750e-49 | -8.615850e-47 |
| Msa0011040 | Msa0099890 | 0.819045 | 1.427111e-52 | -8.615850e-47 |
| Msa0013270 | Msa0099890 | 0.829042 | 6.420743e-55 | -8.615850e-47 |
| Msa0015070 | Msa0099890 | 0.808116 | 3.627931e-50 | -8.615850e-47 |
| Msa0016380 | Msa0099890 | -0.800109 | 1.681693e-48 | -8.615850e-47 |
| Msa0017710 | Msa0099890 | 0.820329 | 7.264036e-53 | -8.615850e-47 |
| Msa0024650 | Msa0099890 | 0.820834 | 5.564206e-53 | -8.615850e-47 |
| Msa0025570 | Msa0099890 | 0.810964 | 8.872655e-51 | -8.615850e-47 |
| Msa0025700 | Msa0099890 | 0.814005 | 1.919813e-51 | -8.615850e-47 |
| Msa0032130 | Msa0099890 | 0.808520 | 2.975289e-50 | -8.615850e-47 |
| Msa0032390 | Msa0099890 | 0.810245 | 1.268744e-50 | -8.615850e-47 |
| Msa0038010 | Msa0099890 | 0.812594 | 3.919714e-51 | -8.615850e-47 |
| Msa0040930 | Msa0099890 | 0.833304 | 5.759032e-56 | -8.615850e-47 |
| Msa0045620 | Msa0099890 | 0.828894 | 6.972890e-55 | -8.615850e-47 |
| Msa0045810 | Msa0099890 | 0.801465 | 8.888316e-49 | -8.615850e-47 |
| Msa0046050 | Msa0099890 | -0.809555 | 1.786235e-50 | -8.615850e-47 |
| Msa0047560 | Msa0099890 | -0.829107 | 6.194038e-55 | -8.615850e-47 |
| Msa0048380 | Msa0099890 | 0.812067 | 5.108416e-51 | -8.615850e-47 |
| Msa0051910 | Msa0099890 | 0.803025 | 4.243655e-49 | -8.615850e-47 |
| Msa0054050 | Msa0099890 | 0.957894 | 8.977183e-116 | -8.615850e-47 |
| Msa0057860 | Msa0099890 | 0.812595 | 3.917673e-51 | -8.615850e-47 |
| Msa0057870 | Msa0099890 | 0.807609 | 4.650165e-50 | -8.615850e-47 |
| Msa0073110 | Msa0099890 | 0.811592 | 6.481103e-51 | -8.615850e-47 |
| Msa0073270 | Msa0099890 | 0.817833 | 2.686037e-52 | -8.615850e-47 |
| Msa0078160 | Msa0099890 | -0.813704 | 2.236904e-51 | -8.615850e-47 |
| Msa0081120 | Msa0099890 | -0.809692 | 1.668401e-50 | -8.615850e-47 |
| Msa0095910 | Msa0099890 | 0.801570 | 8.458798e-49 | -8.615850e-47 |
| Msa0099890 | Msa0102920 | 0.821615 | 3.674238e-53 | -8.615850e-47 |
| Msa0099890 | Msa0105590 | -0.812821 | 3.495327e-51 | -8.615850e-47 |
| Msa0099890 | Msa0106540 | 0.805981 | 1.026457e-49 | -8.615850e-47 |
| Msa0099890 | Msa0111780 | 0.832787 | 7.745583e-56 | -8.615850e-47 |
| Msa0099890 | Msa0120050 | 0.801760 | 7.734618e-49 | -8.615850e-47 |
| Msa0099890 | Msa0121320 | 0.820915 | 5.327798e-53 | -8.615850e-47 |
| Msa0099890 | Msa0121470 | 0.845669 | 3.516283e-59 | -8.615850e-47 |
| Msa0099890 | Msa0121490 | 0.846539 | 2.037788e-59 | -8.615850e-47 |
| Msa0099890 | Msa0132080 | -0.819903 | 9.096461e-53 | -8.615850e-47 |
| Msa0099890 | Msa0132250 | 0.813638 | 2.313141e-51 | -8.615850e-47 |
| Msa0099890 | Msa0136090 | 0.842481 | 2.519420e-58 | -8.615850e-47 |
| Msa0099890 | Msa0137010 | -0.816304 | 5.926600e-52 | -8.615850e-47 |
| Msa0099890 | Msa0140870 | -0.801011 | 1.101048e-48 | -8.615850e-47 |
| Msa0099890 | Msa0147680 | 0.845874 | 3.093746e-59 | -8.615850e-47 |
| Msa0099890 | Msa0148670 | 0.892074 | 2.219699e-74 | -8.615850e-47 |
| Msa0099890 | Msa0163690 | 0.817805 | 2.724908e-52 | -8.615850e-47 |
| Msa0099890 | Msa0166180 | 0.816118 | 6.519024e-52 | -8.615850e-47 |
| Msa0099890 | Msa0180210 | 0.814252 | 1.693591e-51 | -8.615850e-47 |
| Msa0099890 | Msa0185690 | 0.815728 | 7.967351e-52 | -8.615850e-47 |
| Msa0099890 | Msa0190890 | 0.804473 | 2.123911e-49 | -8.615850e-47 |
| Msa0099890 | Msa0192830 | 0.828823 | 7.257802e-55 | -8.615850e-47 |
| Msa0099890 | Msa0206370 | 0.866444 | 2.839025e-65 | -8.615850e-47 |
| Msa0099890 | Msa0210790 | 0.836953 | 6.918253e-57 | -8.615850e-47 |
| Msa0099890 | Msa0210850 | 0.834458 | 2.963334e-56 | -8.615850e-47 |
| Msa0099890 | Msa0211460 | 0.806983 | 6.310579e-50 | -8.615850e-47 |
| Msa0099890 | Msa0212950 | -0.804780 | 1.833098e-49 | -8.615850e-47 |
| Msa0099890 | Msa0220090 | 0.809410 | 1.918852e-50 | -8.615850e-47 |
| Msa0099890 | Msa0221460 | -0.804451 | 2.147039e-49 | -8.615850e-47 |
| Msa0099890 | Msa0235080 | 0.815869 | 7.409116e-52 | -8.615850e-47 |
| Msa0099890 | Msa0244310 | 0.823657 | 1.230859e-53 | -8.615850e-47 |
| Msa0099890 | Msa0251120 | 0.806225 | 9.120304e-50 | -8.615850e-47 |
| Msa0099890 | Msa0253230 | -0.812273 | 4.606554e-51 | -8.615850e-47 |
| Msa0099890 | Msa0259300 | 0.809484 | 1.850035e-50 | -8.615850e-47 |
| Msa0099890 | Msa0260980 | 0.824462 | 7.968407e-54 | -8.615850e-47 |
| Msa0099890 | Msa0261400 | 0.802118 | 6.528371e-49 | -8.615850e-47 |
| Msa0099890 | Msa0266140 | -0.810081 | 1.376239e-50 | -8.615850e-47 |
| Msa0099890 | Msa0267450 | -0.804810 | 1.806516e-49 | -8.615850e-47 |
| Msa0099890 | Msa0267510 | -0.805253 | 1.459484e-49 | -8.615850e-47 |
| Msa0099890 | Msa0270730 | -0.801750 | 7.770324e-49 | -8.615850e-47 |
| Msa0099890 | Msa0273360 | 0.811886 | 5.594643e-51 | -8.615850e-47 |
| Msa0099890 | Msa0278940 | 0.808269 | 3.365117e-50 | -8.615850e-47 |
| Msa0099890 | Msa0279810 | 0.827450 | 1.554399e-54 | -8.615850e-47 |
| Msa0099890 | Msa0282830 | 0.815699 | 8.085224e-52 | -8.615850e-47 |
| Msa0099890 | Msa0299030 | 0.806560 | 7.752597e-50 | -8.615850e-47 |
| Msa0099890 | Msa0304060 | -0.814071 | 1.856621e-51 | -8.615850e-47 |
| Msa0099890 | Msa0307630 | 0.823033 | 1.722327e-53 | -8.615850e-47 |
| Msa0099890 | Msa0319220 | 0.825755 | 3.943045e-54 | -8.615850e-47 |
| Msa0099890 | Msa0321240 | 0.812273 | 4.606100e-51 | -8.615850e-47 |
| Msa0099890 | Msa0327890 | 0.818335 | 2.068554e-52 | -8.615850e-47 |
| Msa0099890 | Msa0336430 | 0.863255 | 2.836271e-64 | -8.615850e-47 |
| Msa0099890 | Msa0336460 | 0.853889 | 1.773265e-61 | -8.615850e-47 |
| Msa0099890 | Msa0336520 | 0.855950 | 4.470639e-62 | -8.615850e-47 |
| Msa0099890 | Msa0349910 | 0.812710 | 3.697024e-51 | -8.615850e-47 |
| Msa0099890 | Msa0349930 | 0.820675 | 6.052715e-53 | -8.615850e-47 |
| Msa0099890 | Msa0354600 | 0.801991 | 6.933257e-49 | -8.615850e-47 |
| Msa0099890 | Msa0357470 | 0.830190 | 3.375599e-55 | -8.615850e-47 |
| Msa0099890 | Msa0357510 | 0.829663 | 4.538245e-55 | -8.615850e-47 |
| Msa0099890 | Msa0357530 | 0.823518 | 1.326727e-53 | -8.615850e-47 |
| Msa0099890 | Msa0357550 | 0.809242 | 2.084875e-50 | -8.615850e-47 |
| Msa0099890 | Msa0357560 | 0.820864 | 5.474844e-53 | -8.615850e-47 |
| Msa0099890 | Msa0364030 | -0.804762 | 1.848445e-49 | -8.615850e-47 |
| Msa0099890 | Msa0366510 | 0.815789 | 7.723503e-52 | -8.615850e-47 |
| Msa0099890 | Msa0370620 | 0.801428 | 9.045752e-49 | -8.615850e-47 |
| Msa0099890 | Msa0371350 | -0.811484 | 6.843088e-51 | -8.615850e-47 |
| Msa0099890 | Msa0374470 | 0.818950 | 1.499703e-52 | -8.615850e-47 |
| Msa0099890 | Msa0374600 | 0.814894 | 1.220981e-51 | -8.615850e-47 |
| Msa0099890 | Msa0375570 | -0.805155 | 1.529843e-49 | -8.615850e-47 |
| Msa0099890 | Msa0379480 | 0.826348 | 2.849423e-54 | -8.615850e-47 |
| Msa0099890 | Msa0386910 | 0.825158 | 5.461150e-54 | -8.615850e-47 |
| Msa0099890 | Msa0391600 | 0.826020 | 3.410381e-54 | -8.615850e-47 |
| Msa0099890 | Msa0393820 | 0.843022 | 1.808784e-58 | -8.615850e-47 |
| Msa0099890 | Msa0396860 | 0.822308 | 2.539195e-53 | -8.615850e-47 |
| Msa0099890 | Msa0397190 | 0.800047 | 1.730817e-48 | -8.615850e-47 |
| Msa0099890 | Msa0401440 | 0.801375 | 9.277183e-49 | -8.615850e-47 |
| Msa0099890 | Msa0403740 | -0.806106 | 9.665160e-50 | -8.615850e-47 |
| Msa0099890 | Msa0404140 | 0.822890 | 1.859813e-53 | -8.615850e-47 |
| Msa0099890 | Msa0423220 | 0.824666 | 7.133554e-54 | -8.615850e-47 |
| Msa0099890 | Msa0423630 | 0.825120 | 5.573035e-54 | -8.615850e-47 |
| Msa0099890 | Msa0424220 | -0.806390 | 8.421533e-50 | -8.615850e-47 |
| Msa0099890 | Msa0427260 | -0.827899 | 1.212585e-54 | -8.615850e-47 |
| Msa0099890 | Msa0433090 | 0.812883 | 3.388766e-51 | -8.615850e-47 |
| Msa0099890 | Msa0437790 | -0.807290 | 5.434049e-50 | -8.615850e-47 |
| Msa0099890 | Msa0444200 | 0.807198 | 5.681360e-50 | -8.615850e-47 |
| Msa0099890 | Msa0444210 | 0.809915 | 1.494492e-50 | -8.615850e-47 |
| Msa0099890 | Msa0456450 | -0.803219 | 3.869463e-49 | -8.615850e-47 |
| Msa0099890 | Msa0470420 | 0.803696 | 3.081368e-49 | -8.615850e-47 |
| Msa0099890 | Msa0471130 | -0.826792 | 2.233497e-54 | -8.615850e-47 |
| Msa0099890 | Msa0475330 | 0.803647 | 3.154932e-49 | -8.615850e-47 |
| Msa0099890 | Msa0491770 | 0.823972 | 1.038551e-53 | -8.615850e-47 |
| Msa0099890 | Msa0523720 | 0.827623 | 1.412722e-54 | -8.615850e-47 |
| Msa0099890 | Msa0524710 | 0.819332 | 1.228024e-52 | -8.615850e-47 |
| Msa0099890 | Msa0525400 | 0.820073 | 8.314660e-53 | -8.615850e-47 |
| Msa0099890 | Msa0526880 | 0.801168 | 1.022447e-48 | -8.615850e-47 |
| Msa0099890 | Msa0530660 | 0.852428 | 4.647689e-61 | -8.615850e-47 |
| Msa0099890 | Msa0540640 | 0.802994 | 4.306756e-49 | -8.615850e-47 |
| Msa0099890 | Msa0549170 | 0.809312 | 2.013745e-50 | -8.615850e-47 |
| Msa0099890 | Msa0561830 | 0.815007 | 1.152678e-51 | -8.615850e-47 |
| Msa0099890 | Msa0562050 | 0.812550 | 4.006931e-51 | -8.615850e-47 |
| Msa0099890 | Msa0565700 | 0.802876 | 4.556491e-49 | -8.615850e-47 |
| Msa0099890 | Msa0566460 | 0.820907 | 5.351794e-53 | -8.615850e-47 |
| Msa0099890 | Msa0567330 | 0.818941 | 1.507125e-52 | -8.615850e-47 |
| Msa0099890 | Msa0567570 | 0.832228 | 1.065763e-55 | -8.615850e-47 |
| Msa0099890 | Msa0568460 | -0.812735 | 3.651000e-51 | -8.615850e-47 |
| Msa0099890 | Msa0576320 | 0.818203 | 2.215525e-52 | -8.615850e-47 |
| Msa0099890 | Msa0576500 | -0.820839 | 5.549376e-53 | -8.615850e-47 |
| Msa0099890 | Msa0577050 | -0.803204 | 3.897221e-49 | -8.615850e-47 |
| Msa0099890 | Msa0583390 | 0.800569 | 1.355063e-48 | -8.615850e-47 |
| Msa0099890 | Msa0584970 | 0.826389 | 2.786123e-54 | -8.615850e-47 |
| Msa0099890 | Msa0587180 | 0.847917 | 8.535201e-60 | -8.615850e-47 |
| Msa0099890 | Msa0587730 | 0.801208 | 1.003314e-48 | -8.615850e-47 |
| Msa0099890 | Msa0597170 | 0.805562 | 1.257528e-49 | -8.615850e-47 |
| Msa0099890 | Msa0597800 | 0.800930 | 1.143902e-48 | -8.615850e-47 |
| Msa0099890 | Msa0597820 | 0.801000 | 1.106828e-48 | -8.615850e-47 |
| Msa0099890 | Msa0602050 | 0.840960 | 6.347086e-58 | -8.615850e-47 |
| Msa0099890 | Msa0604200 | 0.807485 | 4.939323e-50 | -8.615850e-47 |
| Msa0099890 | Msa0605520 | 0.822692 | 2.067853e-53 | -8.615850e-47 |
| Msa0099890 | Msa0606600 | 0.813684 | 2.259915e-51 | -8.615850e-47 |
| Msa0099890 | Msa0610190 | 0.815732 | 7.952014e-52 | -8.615850e-47 |
| Msa0099890 | Msa0612880 | -0.802197 | 6.290649e-49 | -8.615850e-47 |
| Msa0099890 | Msa0614020 | -0.800353 | 1.499856e-48 | -8.615850e-47 |
| Msa0099890 | Msa0614960 | 0.815148 | 1.072266e-51 | -8.615850e-47 |
| Msa0099890 | Msa0616010 | 0.801746 | 7.784653e-49 | -8.615850e-47 |
| Msa0099890 | Msa0619390 | -0.815633 | 8.365590e-52 | -8.615850e-47 |
| Msa0099890 | Msa0623310 | 0.838867 | 2.228573e-57 | -8.615850e-47 |
| Msa0099890 | Msa0623980 | 0.807534 | 4.822177e-50 | -8.615850e-47 |
| Msa0099890 | Msa0626980 | 0.853335 | 2.557736e-61 | -8.615850e-47 |
| Msa0099890 | Msa0627360 | 0.851187 | 1.045007e-60 | -8.615850e-47 |
| Msa0099890 | Msa0629160 | 0.808834 | 2.548655e-50 | -8.615850e-47 |
| Msa0099890 | Msa0638300 | -0.802099 | 6.588281e-49 | -8.615850e-47 |
| Msa0099890 | Msa0643190 | 0.805883 | 1.076365e-49 | -8.615850e-47 |
| Msa0099890 | Msa0645060 | 0.804501 | 2.095571e-49 | -8.615850e-47 |
| Msa0099890 | Msa0647300 | 0.818851 | 1.580010e-52 | -8.615850e-47 |
| Msa0099890 | Msa0648920 | 0.800432 | 1.445542e-48 | -8.615850e-47 |
| Msa0099890 | Msa0649250 | -0.802240 | 6.162822e-49 | -8.615850e-47 |
| Msa0099890 | Msa0655370 | 0.823201 | 1.573130e-53 | -8.615850e-47 |
| Msa0099890 | Msa0655430 | 0.831954 | 1.245512e-55 | -8.615850e-47 |
| Msa0099890 | Msa0658120 | 0.807344 | 5.291160e-50 | -8.615850e-47 |
| Msa0099890 | Msa0667350 | -0.804772 | 1.839527e-49 | -8.615850e-47 |
| Msa0099890 | Msa0673940 | 0.855652 | 5.463307e-62 | -8.615850e-47 |
| Msa0099890 | Msa0675620 | 0.811606 | 6.437005e-51 | -8.615850e-47 |
| Msa0099890 | Msa0676200 | 0.823012 | 1.741668e-53 | -8.615850e-47 |
| Msa0099890 | Msa0685390 | -0.825532 | 4.453899e-54 | -8.615850e-47 |
| Msa0099890 | Msa0686040 | 0.804132 | 2.501309e-49 | -8.615850e-47 |
| Msa0099890 | Msa0686830 | 0.821684 | 3.542194e-53 | -8.615850e-47 |
| Msa0099890 | Msa0687220 | 0.815960 | 7.073803e-52 | -8.615850e-47 |
| Msa0099890 | Msa0689840 | 0.805728 | 1.160287e-49 | -8.615850e-47 |
| Msa0099890 | Msa0699170 | 0.821327 | 4.283962e-53 | -8.615850e-47 |
| Msa0099890 | Msa0705810 | -0.807831 | 4.171038e-50 | -8.615850e-47 |
| Msa0099890 | Msa0707880 | -0.817091 | 3.946558e-52 | -8.615850e-47 |
| Msa0099890 | Msa0708020 | 0.801861 | 7.372297e-49 | -8.615850e-47 |
| Msa0099890 | Msa0715250 | 0.814356 | 1.606005e-51 | -8.615850e-47 |
| Msa0099890 | Msa0716700 | 0.801999 | 6.906138e-49 | -8.615850e-47 |
| Msa0099890 | Msa0716980 | 0.814944 | 1.190496e-51 | -8.615850e-47 |
| Msa0099890 | Msa0717030 | 0.826878 | 2.130098e-54 | -8.615850e-47 |
| Msa0099890 | Msa0732970 | 0.810814 | 9.560646e-51 | -8.615850e-47 |
| Msa0099890 | Msa0738460 | -0.805947 | 1.043882e-49 | -8.615850e-47 |
| Msa0099890 | Msa0739720 | 0.814045 | 1.881595e-51 | -8.615850e-47 |
| Msa0099890 | Msa0742090 | -0.808808 | 2.582107e-50 | -8.615850e-47 |
| Msa0099890 | Msa0750790 | 0.803089 | 4.116596e-49 | -8.615850e-47 |
| Msa0099890 | Msa0751960 | 0.801215 | 1.000411e-48 | -8.615850e-47 |
| Msa0099890 | Msa0756670 | -0.802080 | 6.646354e-49 | -8.615850e-47 |
| Msa0099890 | Msa0757220 | 0.814165 | 1.770593e-51 | -8.615850e-47 |
| Msa0099890 | Msa0761830 | 0.848672 | 5.280481e-60 | -8.615850e-47 |
| Msa0099890 | Msa0774660 | 0.834185 | 3.469305e-56 | -8.615850e-47 |
| Msa0099890 | Msa0791950 | 0.808620 | 2.832283e-50 | -8.615850e-47 |
| Msa0099890 | Msa0792410 | 0.823668 | 1.223645e-53 | -8.615850e-47 |
| Msa0099890 | Msa0798240 | 0.809613 | 1.735458e-50 | -8.615850e-47 |
| Msa0099890 | Msa0799110 | 0.825757 | 3.938537e-54 | -8.615850e-47 |
| Msa0099890 | Msa0799120 | 0.809579 | 1.765119e-50 | -8.615850e-47 |
| Msa0099890 | Msa0801920 | -0.802407 | 5.693528e-49 | -8.615850e-47 |
| Msa0099890 | Msa0804170 | 0.842910 | 1.937854e-58 | -8.615850e-47 |
| Msa0099890 | Msa0813610 | 0.813422 | 2.581010e-51 | -8.615850e-47 |
| Msa0099890 | Msa0814160 | 0.801502 | 8.736123e-49 | -8.615850e-47 |
| Msa0099890 | Msa0823310 | -0.812526 | 4.055951e-51 | -8.615850e-47 |
| Msa0099890 | Msa0836060 | -0.801787 | 7.636704e-49 | -8.615850e-47 |
| Msa0099890 | Msa0836750 | 0.807137 | 5.854451e-50 | -8.615850e-47 |
| Msa0099890 | Msa0838120 | -0.801723 | 7.868523e-49 | -8.615850e-47 |
| Msa0099890 | Msa0842180 | 0.813633 | 2.318895e-51 | -8.615850e-47 |
| Msa0099890 | Msa0847140 | 0.816403 | 5.629786e-52 | -8.615850e-47 |
| Msa0099890 | Msa0869660 | 0.801373 | 9.283105e-49 | -8.615850e-47 |
| Msa0099890 | Msa0871420 | 0.832488 | 9.187130e-56 | -8.615850e-47 |
| Msa0099890 | Msa0880850 | 0.804139 | 2.493682e-49 | -8.615850e-47 |
| Msa0099890 | Msa0893840 | 0.807289 | 5.436967e-50 | -8.615850e-47 |
| Msa0099890 | Msa0902340 | 0.800348 | 1.503620e-48 | -8.615850e-47 |
| Msa0099890 | Msa0904590 | 0.817758 | 2.792366e-52 | -8.615850e-47 |
| Msa0099890 | Msa0936630 | 0.836044 | 1.178576e-56 | -8.615850e-47 |
| Msa0099890 | Msa0941150 | -0.804794 | 1.820835e-49 | -8.615850e-47 |
| Msa0099890 | Msa0964400 | -0.824311 | 8.648480e-54 | -8.615850e-47 |
| Msa0099890 | Msa0973010 | -0.822424 | 2.387100e-53 | -8.615850e-47 |
| Msa0099890 | Msa0973770 | 0.818952 | 1.498210e-52 | -8.615850e-47 |
| Msa0099890 | Msa0993710 | 0.810306 | 1.231083e-50 | -8.615850e-47 |
| Msa0099890 | Msa1015560 | 0.824912 | 6.240360e-54 | -8.615850e-47 |
| Msa0099890 | Msa1026490 | 0.802495 | 5.459688e-49 | -8.615850e-47 |
| Msa0099890 | Msa1029860 | 0.820929 | 5.288516e-53 | -8.615850e-47 |
| Msa0099890 | Msa1031060 | 0.826783 | 2.244041e-54 | -8.615850e-47 |
| Msa0099890 | Msa1035050 | 0.807617 | 4.632080e-50 | -8.615850e-47 |
| Msa0099890 | Msa1036260 | -0.807701 | 4.445521e-50 | -8.615850e-47 |
| Msa0099890 | Msa1037350 | 0.811599 | 6.458290e-51 | -8.615850e-47 |
| Msa0099890 | Msa1038860 | 0.824038 | 1.002142e-53 | -8.615850e-47 |
| Msa0099890 | Msa1041060 | 0.802225 | 6.206331e-49 | -8.615850e-47 |
| Msa0099890 | Msa1066150 | 0.823888 | 1.086852e-53 | -8.615850e-47 |
| Msa0099890 | Msa1068780 | 0.818287 | 2.121261e-52 | -8.615850e-47 |
| Msa0099890 | Msa1075090 | 0.808347 | 3.238832e-50 | -8.615850e-47 |
| Msa0099890 | Msa1076830 | 0.814336 | 1.622896e-51 | -8.615850e-47 |
| Msa0099890 | Msa1078120 | -0.819945 | 8.896535e-53 | -8.615850e-47 |
| Msa0099890 | Msa1078730 | 0.808231 | 3.428717e-50 | -8.615850e-47 |
| Msa0099890 | Msa1084800 | 0.801710 | 7.918949e-49 | -8.615850e-47 |
| Msa0099890 | Msa1085820 | 0.813914 | 2.010875e-51 | -8.615850e-47 |
| Msa0099890 | Msa1108560 | 0.813794 | 2.137186e-51 | -8.615850e-47 |
| Msa0099890 | Msa1119670 | 0.832964 | 6.997648e-56 | -8.615850e-47 |
| Msa0099890 | Msa1120960 | 0.826985 | 2.008545e-54 | -8.615850e-47 |
| Msa0099890 | Msa1122710 | -0.800669 | 1.293312e-48 | -8.615850e-47 |
| Msa0099890 | Msa1123010 | 0.817914 | 2.574989e-52 | -8.615850e-47 |
| Msa0099890 | Msa1124220 | 0.824865 | 6.403440e-54 | -8.615850e-47 |
| Msa0099890 | Msa1127200 | 0.812202 | 4.773563e-51 | -8.615850e-47 |
| Msa0099890 | Msa1129880 | -0.806389 | 8.421928e-50 | -8.615850e-47 |
| Msa0099890 | Msa1133440 | -0.800633 | 1.315399e-48 | -8.615850e-47 |
| Msa0099890 | Msa1147010 | 0.822109 | 2.824087e-53 | -8.615850e-47 |
| Msa0099890 | Msa1156430 | -0.805239 | 1.469244e-49 | -8.615850e-47 |
| Msa0099890 | Msa1156740 | 0.820919 | 5.318096e-53 | -8.615850e-47 |
| Msa0099890 | Msa1157210 | 0.802184 | 6.329437e-49 | -8.615850e-47 |
| Msa0099890 | Msa1164240 | 0.808545 | 2.937911e-50 | -8.615850e-47 |
| Msa0099890 | Msa1165460 | 0.805795 | 1.123626e-49 | -8.615850e-47 |
| Msa0099890 | Msa1169600 | -0.801634 | 8.209696e-49 | -8.615850e-47 |
| Msa0099890 | Msa1183870 | 0.820585 | 6.345552e-53 | -8.615850e-47 |
| Msa0099890 | Msa1187900 | 0.800283 | 1.550118e-48 | -8.615850e-47 |
| Msa0099890 | Msa1191270 | 0.821429 | 4.056627e-53 | -8.615850e-47 |
| Msa0099890 | Msa1191530 | -0.824679 | 7.084796e-54 | -8.615850e-47 |
| Msa0099890 | Msa1202220 | -0.804862 | 1.761983e-49 | -8.615850e-47 |
| Msa0099890 | Msa1205270 | -0.800483 | 1.410909e-48 | -8.615850e-47 |
| Msa0099890 | Msa1217890 | 0.855277 | 7.025961e-62 | -8.615850e-47 |
| Msa0099890 | Msa1220720 | 0.844107 | 9.277848e-59 | -8.615850e-47 |
| Msa0099890 | Msa1223540 | 0.818589 | 1.811922e-52 | -8.615850e-47 |
| Msa0099890 | Msa1223620 | 0.817828 | 2.692600e-52 | -8.615850e-47 |
| Msa0099890 | Msa1223960 | 0.804960 | 1.680737e-49 | -8.615850e-47 |
| Msa0099890 | Msa1223990 | 0.812858 | 3.430744e-51 | -8.615850e-47 |
| Msa0099890 | Msa1240710 | 0.814158 | 1.776206e-51 | -8.615850e-47 |
| Msa0099890 | Msa1255030 | -0.808031 | 3.781959e-50 | -8.615850e-47 |
| Msa0099890 | Msa1255710 | 0.820188 | 7.825598e-53 | -8.615850e-47 |
| Msa0099890 | Msa1263110 | 0.820629 | 6.200424e-53 | -8.615850e-47 |
| Msa0099890 | Msa1263120 | 0.800454 | 1.430333e-48 | -8.615850e-47 |
| Msa0099890 | Msa1263520 | 0.821530 | 3.844559e-53 | -8.615850e-47 |
| Msa0099890 | Msa1265570 | 0.841088 | 5.875195e-58 | -8.615850e-47 |
| Msa0099890 | Msa1265940 | 0.800344 | 1.505872e-48 | -8.615850e-47 |
| Msa0099890 | Msa1266120 | -0.802446 | 5.588540e-49 | -8.615850e-47 |
| Msa0099890 | Msa1273320 | 0.847397 | 1.186556e-59 | -8.615850e-47 |
| Msa0099890 | Msa1279750 | 0.803041 | 4.211210e-49 | -8.615850e-47 |
| Msa0099890 | Msa1281780 | 0.803335 | 3.662411e-49 | -8.615850e-47 |
| Msa0099890 | Msa1286860 | -0.813109 | 3.023156e-51 | -8.615850e-47 |
| Msa0099890 | Msa1287100 | -0.817567 | 3.083766e-52 | -8.615850e-47 |
| Msa0099890 | Msa1288070 | 0.812275 | 4.600698e-51 | -8.615850e-47 |
| Msa0099890 | Msa1295210 | -0.812181 | 4.824805e-51 | -8.615850e-47 |
| Msa0099890 | Msa1297220 | -0.812464 | 4.184478e-51 | -8.615850e-47 |
| Msa0099890 | Msa1300570 | 0.818184 | 2.237243e-52 | -8.615850e-47 |
| Msa0099890 | Msa1311070 | 0.800468 | 1.421275e-48 | -8.615850e-47 |
| Msa0099890 | Msa1313720 | 0.815774 | 7.780600e-52 | -8.615850e-47 |
| Msa0099890 | Msa1317240 | -0.812742 | 3.638242e-51 | -8.615850e-47 |
| Msa0099890 | Msa1320160 | 0.810857 | 9.355598e-51 | -8.615850e-47 |
| Msa0099890 | Msa1321010 | 0.813120 | 3.005868e-51 | -8.615850e-47 |
| Msa0099890 | Msa1328280 | 0.835650 | 1.483407e-56 | -8.615850e-47 |
| Msa0099890 | Msa1334670 | 0.846577 | 1.990521e-59 | -8.615850e-47 |
| Msa0099890 | Msa1335200 | -0.809717 | 1.648554e-50 | -8.615850e-47 |
| Msa0099890 | Msa1338510 | 0.807092 | 5.985533e-50 | -8.615850e-47 |
| Msa0099890 | Msa1342360 | -0.801996 | 6.916712e-49 | -8.615850e-47 |
| Msa0099890 | Msa1343450 | -0.809756 | 1.616951e-50 | -8.615850e-47 |
| Msa0099890 | Msa1357840 | 0.800522 | 1.385376e-48 | -8.615850e-47 |
| Msa0099890 | Msa1362590 | 0.813991 | 1.933697e-51 | -8.615850e-47 |
| Msa0099890 | Msa1364690 | 0.806942 | 6.438503e-50 | -8.615850e-47 |
| Msa0099890 | Msa1365230 | 0.840475 | 8.501990e-58 | -8.615850e-47 |
| Msa0099890 | Msa1368420 | 0.822615 | 2.154816e-53 | -8.615850e-47 |
| Msa0099890 | Msa1369180 | -0.807421 | 5.095667e-50 | -8.615850e-47 |
| Msa0099890 | Msa1369400 | -0.809517 | 1.819879e-50 | -8.615850e-47 |
| Msa0099890 | Msa1371800 | 0.832165 | 1.104166e-55 | -8.615850e-47 |
| Msa0099890 | Msa1376070 | 0.824778 | 6.713515e-54 | -8.615850e-47 |
| Msa0099890 | Msa1376310 | 0.827962 | 1.170508e-54 | -8.615850e-47 |
| Msa0099890 | Msa1377520 | 0.804606 | 1.992572e-49 | -8.615850e-47 |
| Msa0099890 | Msa1378400 | 0.801772 | 7.690212e-49 | -8.615850e-47 |
| Msa0099890 | Msa1379270 | -0.824500 | 7.804921e-54 | -8.615850e-47 |
| Msa0099890 | Msa1383220 | 0.822343 | 2.492368e-53 | -8.615850e-47 |
| Msa0099890 | Msa1398490 | 0.809954 | 1.465998e-50 | -8.615850e-47 |
| Msa0099890 | Msa1405830 | 0.805342 | 1.398194e-49 | -8.615850e-47 |
| Msa0099890 | Msa1407810 | 0.823744 | 1.174840e-53 | -8.615850e-47 |
| Msa0099890 | Msa1413020 | 0.843314 | 1.512244e-58 | -8.615850e-47 |
| Msa0099890 | Msa1417220 | 0.817145 | 3.839128e-52 | -8.615850e-47 |
| Msa0099890 | Msa1421130 | 0.800112 | 1.679461e-48 | -8.615850e-47 |
| Msa0099890 | Msa1427600 | -0.804761 | 1.849908e-49 | -8.615850e-47 |
| Msa0099890 | Msa1437590 | 0.819241 | 1.288139e-52 | -8.615850e-47 |
| Msa0099890 | Msa1437780 | 0.824038 | 1.001950e-53 | -8.615850e-47 |
| Msa0099890 | Msa1438510 | 0.839116 | 1.920271e-57 | -8.615850e-47 |
| Msa0099890 | Msa1452560 | -0.820627 | 6.206722e-53 | -8.615850e-47 |
| Msa0099890 | Msa1455360 | 0.812456 | 4.201159e-51 | -8.615850e-47 |
| Msa0099890 | Msa1461660 | 0.830618 | 2.654111e-55 | -8.615850e-47 |
| Msa0099890 | Msa1462610 | 0.822943 | 1.806840e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099890 | MtrunA17_Chr1g0150511 | 91.592 | 1011 | 14 | 3 | 1 | 940 | 1 | 1011 | 0.0 | 1846 |
| Msa0099890 | MtrunA17_Chr3g0136601 | 62.610 | 1019 | 229 | 17 | 5 | 941 | 1 | 949 | 0.0 | 1177 |
| Msa0099890 | MtrunA17_Chr1g0150531 | 70.426 | 399 | 59 | 4 | 43 | 393 | 2 | 389 | 2.46e-180 | 526 |
| Msa0099890 | MtrunA17_Chr3g0122391 | 32.704 | 318 | 157 | 7 | 331 | 625 | 443 | 726 | 2.34e-35 | 145 |
| Msa0099890 | MtrunA17_Chr3g0122391 | 32.639 | 144 | 77 | 3 | 799 | 941 | 901 | 1025 | 3.85e-13 | 73.9 |
| Msa0099890 | MtrunA17_Chr8g0392301 | 32.698 | 315 | 163 | 9 | 331 | 616 | 386 | 680 | 1.70e-32 | 136 |
| Msa0099890 | MtrunA17_Chr8g0392301 | 32.934 | 167 | 96 | 4 | 776 | 941 | 844 | 995 | 1.73e-16 | 84.7 |
| Msa0099890 | MtrunA17_Chr8g0377481 | 31.353 | 303 | 149 | 6 | 331 | 610 | 395 | 661 | 1.20e-31 | 133 |
| Msa0099890 | MtrunA17_Chr5g0447641 | 30.592 | 304 | 156 | 7 | 331 | 610 | 620 | 892 | 4.53e-28 | 122 |
| Msa0099890 | MtrunA17_Chr5g0447641 | 31.429 | 140 | 89 | 2 | 788 | 926 | 1065 | 1198 | 1.90e-12 | 71.6 |
| Msa0099890 | MtrunA17_Chr7g0269631 | 27.414 | 321 | 176 | 10 | 332 | 647 | 348 | 616 | 3.56e-22 | 102 |
| Msa0099890 | MtrunA17_Chr5g0405701 | 28.105 | 306 | 149 | 7 | 331 | 612 | 512 | 770 | 1.50e-20 | 98.2 |
| Msa0099890 | MtrunA17_Chr5g0405701 | 29.592 | 196 | 82 | 4 | 762 | 929 | 1018 | 1185 | 7.41e-11 | 66.6 |
| Msa0099890 | MtrunA17_Chr8g0371601 | 27.667 | 300 | 146 | 8 | 331 | 606 | 474 | 726 | 1.89e-20 | 97.8 |
| Msa0099890 | MtrunA17_Chr8g0371601 | 28.346 | 254 | 124 | 8 | 703 | 934 | 942 | 1159 | 2.94e-11 | 67.8 |
| Msa0099890 | MtrunA17_Chr4g0013831 | 33.562 | 146 | 74 | 1 | 332 | 454 | 348 | 493 | 7.94e-19 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099890 | AT5G10720.1 | 50.927 | 1025 | 314 | 21 | 1 | 940 | 1 | 921 | 0.0 | 900 |
| Msa0099890 | AT5G10680.2 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 4.90e-41 | 151 |
| Msa0099890 | AT5G10680.1 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 4.90e-41 | 151 |
| Msa0099890 | AT2G01830.2 | 31.392 | 309 | 154 | 6 | 331 | 610 | 475 | 754 | 4.32e-32 | 135 |
| Msa0099890 | AT2G01830.2 | 32.558 | 129 | 68 | 3 | 799 | 926 | 947 | 1057 | 2.61e-11 | 68.6 |
| Msa0099890 | AT2G01830.1 | 31.392 | 309 | 154 | 6 | 331 | 610 | 452 | 731 | 4.75e-32 | 135 |
| Msa0099890 | AT2G01830.1 | 32.558 | 129 | 68 | 3 | 799 | 926 | 924 | 1034 | 2.63e-11 | 68.6 |
| Msa0099890 | AT2G01830.4 | 31.392 | 309 | 154 | 6 | 331 | 610 | 452 | 731 | 4.75e-32 | 135 |
| Msa0099890 | AT2G01830.4 | 32.558 | 129 | 68 | 3 | 799 | 926 | 924 | 1034 | 2.63e-11 | 68.6 |
| Msa0099890 | AT2G01830.6 | 31.392 | 309 | 154 | 6 | 331 | 610 | 452 | 731 | 4.75e-32 | 135 |
| Msa0099890 | AT2G01830.6 | 32.558 | 129 | 68 | 3 | 799 | 926 | 924 | 1034 | 2.63e-11 | 68.6 |
| Msa0099890 | AT2G01830.3 | 31.392 | 309 | 154 | 6 | 331 | 610 | 452 | 731 | 4.75e-32 | 135 |
| Msa0099890 | AT2G01830.3 | 32.558 | 129 | 68 | 3 | 799 | 926 | 924 | 1034 | 2.63e-11 | 68.6 |
| Msa0099890 | AT2G01830.5 | 31.392 | 309 | 154 | 6 | 331 | 610 | 464 | 743 | 5.02e-32 | 135 |
| Msa0099890 | AT2G01830.5 | 32.558 | 129 | 68 | 3 | 799 | 926 | 936 | 1046 | 2.66e-11 | 68.6 |
| Msa0099890 | AT1G27320.1 | 32.013 | 303 | 145 | 6 | 331 | 610 | 453 | 717 | 5.18e-31 | 132 |
| Msa0099890 | AT1G27320.1 | 33.083 | 133 | 82 | 3 | 795 | 926 | 888 | 1014 | 6.22e-13 | 73.6 |
| Msa0099890 | AT5G35750.1 | 31.922 | 307 | 147 | 6 | 331 | 610 | 590 | 861 | 4.05e-29 | 126 |
| Msa0099890 | AT5G35750.1 | 33.333 | 129 | 79 | 3 | 799 | 926 | 1037 | 1159 | 2.72e-12 | 71.6 |
| Msa0099890 | AT2G17820.1 | 24.747 | 396 | 205 | 14 | 261 | 627 | 443 | 774 | 4.05e-22 | 103 |
| Msa0099890 | AT1G66340.1 | 33.557 | 149 | 75 | 2 | 324 | 448 | 338 | 486 | 1.41e-17 | 88.6 |
| Msa0099890 | AT2G40940.1 | 27.854 | 219 | 104 | 6 | 290 | 454 | 282 | 500 | 4.75e-12 | 70.5 |
Find 166 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCGTGCTTAGTTTCT+AGG | 0.186732 | 1_3:+6210884 | None:intergenic |
| GAGATAAGATCGCCACTTTC+TGG | 0.197324 | 1_3:-6213015 | Msa0099890:CDS |
| TTGGTGAGATTCTTCTTCTT+TGG | 0.219070 | 1_3:+6212022 | None:intergenic |
| CAAACGTCCGGTTTCGATAT+TGG | 0.225048 | 1_3:-6214684 | Msa0099890:CDS |
| GGAAGTTGAGCAAAGAAAAT+TGG | 0.237386 | 1_3:-6214759 | Msa0099890:CDS |
| TTGATCACATCTCATACTTC+TGG | 0.237521 | 1_3:+6211932 | None:intergenic |
| TTTGGAACAGGTTGAATTAA+TGG | 0.245842 | 1_3:-6211280 | Msa0099890:intron |
| ACTGGTCTTCTGTGACCTTT+TGG | 0.259087 | 1_3:+6212003 | None:intergenic |
| TAAAGAGCAAAGACAGCTTT+TGG | 0.270075 | 1_3:-6212950 | Msa0099890:CDS |
| CTTACAAATTATACAGATAA+AGG | 0.272256 | 1_3:-6214884 | Msa0099890:CDS |
| AAAGTTATTTCCTTCTTTGC+AGG | 0.284917 | 1_3:+6213482 | None:intergenic |
| CATGTTATCTTCAGGAGATT+TGG | 0.286514 | 1_3:-6212923 | Msa0099890:CDS |
| AACATATCTTGGTCTCTTCC+TGG | 0.287184 | 1_3:+6214965 | None:intergenic |
| AATAAAACCATTCACATTAC+AGG | 0.292769 | 1_3:-6213185 | Msa0099890:intron |
| CCAATTCCAACCACGAACTT+TGG | 0.307599 | 1_3:-6211103 | Msa0099890:CDS |
| TCTTTGGCAAATGCTGGTTC+TGG | 0.312428 | 1_3:+6212038 | None:intergenic |
| CATTGTTAAACACATGATTC+TGG | 0.316290 | 1_3:+6211871 | None:intergenic |
| GCAGACCATGCTCGAAAATA+TGG | 0.317830 | 1_3:-6211550 | Msa0099890:CDS |
| AACAATTGGAGTAAACTATA+TGG | 0.319084 | 1_3:-6213390 | Msa0099890:CDS |
| CAATTCCAACCACGAACTTT+GGG | 0.320655 | 1_3:-6211102 | Msa0099890:CDS |
| AGTATGATACTGTTGTTTAC+TGG | 0.324129 | 1_3:-6214571 | Msa0099890:CDS |
| GTTTGAAGACCATTCATAAC+TGG | 0.338515 | 1_3:+6210379 | None:intergenic |
| ACATCAGTTCCAACATCTTC+TGG | 0.341534 | 1_3:+6215013 | None:intergenic |
| ACAAAACCATGATAATAATA+AGG | 0.343332 | 1_3:-6210845 | Msa0099890:CDS |
| TCGGAGAGAGGATATATTAA+AGG | 0.347750 | 1_3:-6214504 | Msa0099890:CDS |
| CTATACCTACTTTATTTAGA+AGG | 0.350625 | 1_3:-6211588 | Msa0099890:CDS |
| ATTCGGCTTTAACGTCGATT+TGG | 0.353565 | 1_3:+6210663 | None:intergenic |
| TCTTCAACAAGAAGAATATT+CGG | 0.358321 | 1_3:+6210646 | None:intergenic |
| TTACTTCTTCCAACATATCT+TGG | 0.359994 | 1_3:+6214954 | None:intergenic |
| GGCTTATTTAATGCAACATT+GGG | 0.361294 | 1_3:-6214849 | Msa0099890:CDS |
| CCAAAGTTCGTGGTTGGAAT+TGG | 0.374939 | 1_3:+6211103 | None:intergenic |
| AGCATGGATGTCGTGAATAA+TGG | 0.377420 | 1_3:-6210571 | Msa0099890:CDS |
| TTGGATGTCATGTTATCTTC+AGG | 0.380119 | 1_3:-6212931 | Msa0099890:CDS |
| CATGCACCTTATTATTATCA+TGG | 0.383722 | 1_3:+6210839 | None:intergenic |
| CTAGAGTTTGCACTACCATT+TGG | 0.384833 | 1_3:+6210808 | None:intergenic |
| CTTATGAAGAAACAGGCAAT+TGG | 0.396625 | 1_3:-6210339 | Msa0099890:CDS |
| TTCGAGGAAGAGATTAGTTA+TGG | 0.399361 | 1_3:-6214713 | Msa0099890:CDS |
| AACAGTTGGAGGCGAGTATT+CGG | 0.405955 | 1_3:-6214523 | Msa0099890:CDS |
| GAAGTGTTATATACCTCAAT+AGG | 0.406853 | 1_3:+6212360 | None:intergenic |
| TGATCACATCTCATACTTCT+GGG | 0.407144 | 1_3:+6211933 | None:intergenic |
| TGATGATCCAGATGATCTTT+CGG | 0.409319 | 1_3:-6211166 | Msa0099890:CDS |
| AAGAGAGAAGTAATGGAGAA+AGG | 0.411442 | 1_3:-6213509 | Msa0099890:CDS |
| TCTTCTTCTTTGGCAAATGC+TGG | 0.415639 | 1_3:+6212032 | None:intergenic |
| CAGTCAACTATTTCAGCAAA+TGG | 0.416796 | 1_3:-6211984 | Msa0099890:CDS |
| TCAAGTAACATCATTTCAAA+TGG | 0.417988 | 1_3:-6210988 | Msa0099890:CDS |
| ATTAGGTCTTATGAAGAAAC+AGG | 0.429646 | 1_3:-6210346 | Msa0099890:CDS |
| TTGGAACAGGTTGAATTAAT+GGG | 0.430242 | 1_3:-6211279 | Msa0099890:intron |
| GATCTTTCCAAGGTTGAGTC+AGG | 0.431218 | 1_3:-6212874 | Msa0099890:intron |
| CACATTCATACTACCATACA+AGG | 0.433058 | 1_3:-6211211 | Msa0099890:CDS |
| AAATATGGAGGCACAGGTCT+AGG | 0.436640 | 1_3:-6211535 | Msa0099890:CDS |
| TCGAGGAAGAGATTAGTTAT+GGG | 0.438884 | 1_3:-6214712 | Msa0099890:CDS |
| AAGATCTACCGGCGGCGATA+AGG | 0.439631 | 1_3:-6214640 | Msa0099890:CDS |
| TCAAAATAATGTCGTATGAA+TGG | 0.440366 | 1_3:+6210521 | None:intergenic |
| TTCAAACAACAAAACTGATT+AGG | 0.443792 | 1_3:-6210363 | Msa0099890:CDS |
| AGATAAAGGGTCATCTCAAT+TGG | 0.444089 | 1_3:-6214870 | Msa0099890:CDS |
| ATAAGCAGGCGAACGCGGTT+CGG | 0.446744 | 1_3:-6214823 | Msa0099890:CDS |
| CAAGCTGTTGAAACCTTGTA+TGG | 0.450617 | 1_3:+6211198 | None:intergenic |
| TGGGATGCTGCAAGAGAAGC+TGG | 0.451002 | 1_3:-6210319 | Msa0099890:CDS |
| ATGTAAATATTGCAGGTCAC+TGG | 0.451028 | 1_3:-6212282 | Msa0099890:intron |
| CGAGGAAGAGATTAGTTATG+GGG | 0.452682 | 1_3:-6214711 | Msa0099890:CDS |
| TGGCTTATTTAATGCAACAT+TGG | 0.452961 | 1_3:-6214850 | Msa0099890:CDS |
| AAATGGAACAAATTCAATTG+AGG | 0.453149 | 1_3:-6210971 | Msa0099890:CDS |
| ACTAGCAATATGTAAACAAC+TGG | 0.455705 | 1_3:-6211512 | Msa0099890:intron |
| TTGAAATGATGTTACTTGAA+TGG | 0.456614 | 1_3:+6210992 | None:intergenic |
| AGTGTCTTGAAAAGTATCTA+AGG | 0.457868 | 1_3:-6209911 | Msa0099890:CDS |
| AGATTCCTTCACACCTGCTC+CGG | 0.458251 | 1_3:+6213541 | None:intergenic |
| CTGGTTCTGGAACAACATAA+AGG | 0.460292 | 1_3:+6212051 | None:intergenic |
| TCGACATCCGAAAGATCATC+TGG | 0.460612 | 1_3:+6211159 | None:intergenic |
| CAGAAAATGTTAACATTGGA+AGG | 0.461173 | 1_3:-6212402 | Msa0099890:CDS |
| ACAATTGGAGTAAACTATAT+GGG | 0.461326 | 1_3:-6213389 | Msa0099890:CDS |
| AGCAAGGCAGGTGAAACAAT+TGG | 0.462061 | 1_3:-6213404 | Msa0099890:CDS |
| GATTAAACCTGTAATGTGAA+TGG | 0.463646 | 1_3:+6213178 | None:intergenic |
| GAAAGGAGTGCCTGCAAAGA+AGG | 0.466099 | 1_3:-6213492 | Msa0099890:CDS |
| CTCTACTTGCTTCATTACAT+TGG | 0.472879 | 1_3:+6210785 | None:intergenic |
| AGATTCTTACAAATTTAGTC+AGG | 0.474911 | 1_3:-6212239 | Msa0099890:intron |
| CTATACATGGCAAGATCTAC+CGG | 0.482979 | 1_3:-6214651 | Msa0099890:CDS |
| TGAACCACAACAAACATGTC+AGG | 0.483397 | 1_3:-6210737 | Msa0099890:CDS |
| GTTTACATGCCAGTTATGAA+TGG | 0.483418 | 1_3:-6210388 | Msa0099890:CDS |
| AGAATGTTTCGCCAACGGTA+TGG | 0.484664 | 1_3:-6209976 | Msa0099890:CDS |
| ACTTTCTGGTGTTGTTAGCA+TGG | 0.486916 | 1_3:-6213001 | Msa0099890:CDS |
| TTACAAATTATACAGATAAA+GGG | 0.487288 | 1_3:-6214883 | Msa0099890:CDS |
| TTATGAAGAAACAGGCAATT+GGG | 0.491132 | 1_3:-6210338 | Msa0099890:CDS |
| GGGAATGGAAATAACAGATC+AGG | 0.491945 | 1_3:-6213369 | Msa0099890:intron |
| AGAATCTCACACAAGTTCAA+TGG | 0.492632 | 1_3:-6211042 | Msa0099890:CDS |
| AAACAAGAGAATTGAAATTG+AGG | 0.492797 | 1_3:-6214597 | Msa0099890:CDS |
| TATTTCAGCAAATGGATTGA+AGG | 0.494958 | 1_3:-6211976 | Msa0099890:CDS |
| GAACCTGTGTTTAGCAAGGC+AGG | 0.495935 | 1_3:-6213416 | Msa0099890:CDS |
| CTTTGAAAATCAGCTATAGC+TGG | 0.498599 | 1_3:+6214917 | None:intergenic |
| GATGTGTACGACACTGGAAT+TGG | 0.499123 | 1_3:-6211756 | Msa0099890:CDS |
| GAGAAAGAATGGCAAAGCTA+AGG | 0.499190 | 1_3:-6213247 | Msa0099890:CDS |
| TTTCTAACCTGACTCAACCT+TGG | 0.509156 | 1_3:+6212867 | None:intergenic |
| ATACACAAGTAAAATTTACA+TGG | 0.513327 | 1_3:+6209882 | None:intergenic |
| AAGCACGAAAGTTTATGTAA+TGG | 0.515480 | 1_3:-6210874 | Msa0099890:CDS |
| GCATCGTCCAATATCGAAAC+CGG | 0.516844 | 1_3:+6214677 | None:intergenic |
| AGATAACAAGATTAATATCA+TGG | 0.517181 | 1_3:-6210626 | Msa0099890:CDS |
| GTTTGAAATGGTTTGTGAGA+TGG | 0.519841 | 1_3:-6215089 | None:intergenic |
| GTGTGAGATTCTATGAGGCC+TGG | 0.520618 | 1_3:+6211053 | None:intergenic |
| TAAAGAGAATAATCGATTCG+AGG | 0.522514 | 1_3:-6214729 | Msa0099890:CDS |
| AGGAAGAGACCAAGATATGT+TGG | 0.524319 | 1_3:-6214963 | Msa0099890:CDS |
| ATTGCAGAAAATGTTAACAT+TGG | 0.525478 | 1_3:-6212406 | Msa0099890:CDS |
| GAAGATGTTGGAACTGATGT+TGG | 0.527223 | 1_3:-6215010 | Msa0099890:CDS |
| AGAAGAAGAATCTCACCAAA+AGG | 0.528810 | 1_3:-6212018 | Msa0099890:CDS |
| AATGAGAGCAAAACAAATGC+TGG | 0.532235 | 1_3:-6213052 | Msa0099890:CDS |
| ATGGCTCTGAACTGCGCGTA+TGG | 0.532419 | 1_3:+6210540 | None:intergenic |
| TTTACACATCAAGGCAAAGT+TGG | 0.534123 | 1_3:-6212080 | Msa0099890:CDS |
| GCTCGAAAATATGGAGGCAC+AGG | 0.535185 | 1_3:-6211541 | Msa0099890:CDS |
| CATTTGCTGAAATAGTTGAC+TGG | 0.538486 | 1_3:+6211985 | None:intergenic |
| GCTGTCAAGTTTACACATCA+AGG | 0.539918 | 1_3:-6212089 | Msa0099890:CDS |
| TTAAACACATGATTCTGGAT+AGG | 0.541070 | 1_3:+6211876 | None:intergenic |
| TGATATACTTGATCTTTCCA+AGG | 0.542061 | 1_3:-6212884 | Msa0099890:CDS |
| AGCCGATGATATACCTATTG+AGG | 0.543862 | 1_3:-6212373 | Msa0099890:intron |
| AAAAGCGAGCCCAAAGTTCG+TGG | 0.544177 | 1_3:+6211093 | None:intergenic |
| TTTGAGTAAGAATCGTTGTC+CGG | 0.544394 | 1_3:+6211015 | None:intergenic |
| TGGACGATGCTTACTATACA+TGG | 0.547039 | 1_3:-6214664 | Msa0099890:CDS |
| TATAAAGGAAATAAGAGCCT+AGG | 0.549994 | 1_3:-6209862 | None:intergenic |
| ATGCTAACAACACCAGAAAG+TGG | 0.550524 | 1_3:+6213003 | None:intergenic |
| AACAAACATGTCAGGGTCAA+GGG | 0.550696 | 1_3:-6210729 | Msa0099890:CDS |
| GCGAGCCCAAAGTTCGTGGT+TGG | 0.551447 | 1_3:+6211097 | None:intergenic |
| TGGAGTAAACTATATGGGAA+TGG | 0.555183 | 1_3:-6213384 | Msa0099890:CDS |
| GTGCATGATAGCTTACCAAA+TGG | 0.555791 | 1_3:-6210823 | Msa0099890:CDS |
| GACACTGGAATTGGCATACC+AGG | 0.557084 | 1_3:-6211747 | Msa0099890:intron |
| GCAACATTGGGAGTATAAGC+AGG | 0.560108 | 1_3:-6214837 | Msa0099890:CDS |
| TGACCCTGACATGTTTGTTG+TGG | 0.560232 | 1_3:+6210733 | None:intergenic |
| AGAAAGAATGGCAAAGCTAA+GGG | 0.561686 | 1_3:-6213246 | Msa0099890:CDS |
| TGGAACAGGTTGAATTAATG+GGG | 0.566185 | 1_3:-6211278 | Msa0099890:intron |
| CAACAAACATGTCAGGGTCA+AGG | 0.567768 | 1_3:-6210730 | Msa0099890:CDS |
| CAATCTTAGCAAACAAAGGA+AGG | 0.568976 | 1_3:-6214780 | Msa0099890:CDS |
| CACAAATGCGTCCATACCGT+TGG | 0.570023 | 1_3:+6209965 | None:intergenic |
| ACACATGATTCTGGATAGGA+TGG | 0.570041 | 1_3:+6211880 | None:intergenic |
| CGTTGTGATGTGTACGACAC+TGG | 0.576348 | 1_3:-6211762 | Msa0099890:CDS |
| ATGTACCTTCTAAATAAAGT+AGG | 0.578318 | 1_3:+6211583 | None:intergenic |
| AACTTGTGTGAGATTCTATG+AGG | 0.581575 | 1_3:+6211048 | None:intergenic |
| TCACTTCTAATGGATCCACC+AGG | 0.589068 | 1_3:-6211071 | Msa0099890:CDS |
| TCACCTGCCTTGCTAAACAC+AGG | 0.591633 | 1_3:+6213413 | None:intergenic |
| AAGTCAATGATGAAGCAGCT+AGG | 0.595119 | 1_3:-6210598 | Msa0099890:CDS |
| GAGGAAGAGATTAGTTATGG+GGG | 0.595191 | 1_3:-6214710 | Msa0099890:CDS |
| TACCTCAATAGGTATATCAT+CGG | 0.595988 | 1_3:+6212371 | None:intergenic |
| CATCTCATACTTCTGGGTGA+TGG | 0.595990 | 1_3:+6211939 | None:intergenic |
| TTTCACCGGAGCAGGTGTGA+AGG | 0.596051 | 1_3:-6213546 | Msa0099890:CDS |
| AACATGTCAGGGTCAAGGGA+AGG | 0.598087 | 1_3:-6210725 | Msa0099890:CDS |
| GGAGGCGAGTATTCGGAGAG+AGG | 0.602582 | 1_3:-6214516 | Msa0099890:CDS |
| TTGACAATCTTAGCAAACAA+AGG | 0.607034 | 1_3:-6214784 | Msa0099890:CDS |
| TGTAGAACCTGTGTTTAGCA+AGG | 0.614185 | 1_3:-6213420 | Msa0099890:CDS |
| TGATTGTATTGAAGACATGA+TGG | 0.615316 | 1_3:-6215062 | Msa0099890:CDS |
| TTGGAATTGGAAGAATCCCT+CGG | 0.616918 | 1_3:+6211116 | None:intergenic |
| GAAGCAGCTAGGATATAGCA+TGG | 0.617920 | 1_3:-6210587 | Msa0099890:CDS |
| GCTGAAGAATGTTTCGCCAA+CGG | 0.618188 | 1_3:-6209981 | Msa0099890:CDS |
| TCAATGTGGCCAGAAGATGT+TGG | 0.623443 | 1_3:-6215022 | Msa0099890:CDS |
| GAACCACAACAAACATGTCA+GGG | 0.628011 | 1_3:-6210736 | Msa0099890:CDS |
| CTGTTGTTTACTGGAAACAA+CGG | 0.636650 | 1_3:-6214562 | Msa0099890:CDS |
| GGAACAGGTTGAATTAATGG+GGG | 0.643012 | 1_3:-6211277 | Msa0099890:intron |
| TGAGATTCTATGAGGCCTGG+TGG | 0.645843 | 1_3:+6211056 | None:intergenic |
| AATTGCAGTTCAGAAAGCAA+AGG | 0.648370 | 1_3:-6213219 | Msa0099890:CDS |
| GGAGTATAAGCAGGCGAACG+CGG | 0.650670 | 1_3:-6214828 | Msa0099890:CDS |
| AAAGCGCATCCACATTGTTG+CGG | 0.653392 | 1_3:-6210248 | Msa0099890:intron |
| TTGAAGAGTTATCTTCAATG+TGG | 0.654257 | 1_3:-6215036 | Msa0099890:CDS |
| AACGAAGATGACACAACCGA+GGG | 0.659560 | 1_3:-6211132 | Msa0099890:CDS |
| GACCATGCTCGAAAATATGG+AGG | 0.667505 | 1_3:-6211547 | Msa0099890:CDS |
| GAACAGGTTGAATTAATGGG+GGG | 0.672744 | 1_3:-6211276 | Msa0099890:intron |
| GGATGTCGTGAATAATGGAG+TGG | 0.687300 | 1_3:-6210566 | Msa0099890:CDS |
| TAACGAAGATGACACAACCG+AGG | 0.691038 | 1_3:-6211133 | Msa0099890:CDS |
| GTGACTAGCAAAGAACATTG+TGG | 0.699673 | 1_3:-6211243 | Msa0099890:CDS |
| GTATGGTAGTATGAATGTGA+AGG | 0.713387 | 1_3:+6211215 | None:intergenic |
| AATTGCTCACCGCAACAATG+TGG | 0.726029 | 1_3:+6210239 | None:intergenic |
| ATTCAACTGAAACAACAGTG+TGG | 0.734063 | 1_3:-6211788 | Msa0099890:CDS |
| TACATGGCAAGATCTACCGG+CGG | 0.803486 | 1_3:-6214648 | Msa0099890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTATATATCTTCTAT+TGG | - | chr1_3:6210883-6210902 | Msa0099890:CDS | 10.0% |
| !!! | AATAATTTGATAACAAAAAA+TGG | + | chr1_3:6212113-6212132 | None:intergenic | 10.0% |
| !! | TTTATACAATAAAAAAACTT+AGG | - | chr1_3:6214819-6214838 | Msa0099890:CDS | 10.0% |
| !! | TTACAAATTATACAGATAAA+GGG | - | chr1_3:6210062-6210081 | Msa0099890:intron | 15.0% |
| !!! | AATGAATTTTTCAATCTAAA+AGG | - | chr1_3:6210957-6210976 | Msa0099890:CDS | 15.0% |
| !!! | TGTTATTTTGGTTTTTTTTA+AGG | - | chr1_3:6211606-6211625 | Msa0099890:intron | 15.0% |
| !! | GAAATTCATATATTAAGATT+TGG | + | chr1_3:6211800-6211819 | None:intergenic | 15.0% |
| !!! | ATTTTTAAGTGTAAATTACT+TGG | + | chr1_3:6212637-6212656 | None:intergenic | 15.0% |
| !! | TGAATTAAACTTATAACTAA+AGG | + | chr1_3:6213518-6213537 | None:intergenic | 15.0% |
| !!! | TAAATTTTACTTGTGTATAA+AGG | - | chr1_3:6215068-6215087 | Msa0099890:CDS | 15.0% |
| !! | CTTACAAATTATACAGATAA+AGG | - | chr1_3:6210061-6210080 | Msa0099890:intron | 20.0% |
| !!! | TAATTTTCTCGAATTATTAG+CGG | - | chr1_3:6210743-6210762 | Msa0099890:CDS | 20.0% |
| !!! | TTTTAGTTGATTCATCATTT+TGG | - | chr1_3:6210909-6210928 | Msa0099890:CDS | 20.0% |
| !!! | TCAGGTAAAAATTGTTATTT+TGG | - | chr1_3:6211594-6211613 | Msa0099890:CDS | 20.0% |
| !!! | TACTTTATTTTATCCAAACA+AGG | + | chr1_3:6212170-6212189 | None:intergenic | 20.0% |
| !!! | TCAATAGATGATTTTTATCA+TGG | + | chr1_3:6212316-6212335 | None:intergenic | 20.0% |
| !!! | TCAATTCTAAAACAAAAGAA+AGG | + | chr1_3:6213244-6213263 | None:intergenic | 20.0% |
| !!! | TTAGTTAAGAGTTTGTTAAT+CGG | + | chr1_3:6213618-6213637 | None:intergenic | 20.0% |
| !! | TATATCTAATAAGATTTCCT+TGG | - | chr1_3:6213641-6213660 | Msa0099890:intron | 20.0% |
| !! | ACAAAACCATGATAATAATA+AGG | - | chr1_3:6214100-6214119 | Msa0099890:intron | 20.0% |
| !! | AGATAACAAGATTAATATCA+TGG | - | chr1_3:6214319-6214338 | Msa0099890:intron | 20.0% |
| !! | ATACACAAGTAAAATTTACA+TGG | + | chr1_3:6215066-6215085 | None:intergenic | 20.0% |
| ! | AAACAAGAGAATTGAAATTG+AGG | - | chr1_3:6210348-6210367 | Msa0099890:CDS | 25.0% |
| ! | TTCAGTTTAAATACAAGTGT+CGG | + | chr1_3:6210718-6210737 | None:intergenic | 25.0% |
| ! | CAACTCATGTTTAAATACTA+CGG | + | chr1_3:6211006-6211025 | None:intergenic | 25.0% |
| !! | TAATTTTTCCAGGACATTAT+AGG | - | chr1_3:6211358-6211377 | Msa0099890:intron | 25.0% |
| !!! | AGATTTTAAGAGAGAAGTAA+TGG | - | chr1_3:6211429-6211448 | Msa0099890:intron | 25.0% |
| ! | AACAATTGGAGTAAACTATA+TGG | - | chr1_3:6211555-6211574 | Msa0099890:CDS | 25.0% |
| ! | ACAATTGGAGTAAACTATAT+GGG | - | chr1_3:6211556-6211575 | Msa0099890:CDS | 25.0% |
| ! | AATAAAACCATTCACATTAC+AGG | - | chr1_3:6211760-6211779 | Msa0099890:CDS | 25.0% |
| !! | TTGATAACAAAAAATGGTGA+AGG | + | chr1_3:6212107-6212126 | None:intergenic | 25.0% |
| !! | AATGTTAACATTTTCTGCAA+TGG | + | chr1_3:6212540-6212559 | None:intergenic | 25.0% |
| ! | ATTGCAGAAAATGTTAACAT+TGG | - | chr1_3:6212539-6212558 | Msa0099890:intron | 25.0% |
| ! | TATCTGGTAATAATCAAGTA+TGG | + | chr1_3:6212610-6212629 | None:intergenic | 25.0% |
| ! | TAAATTACTTGGCATTTATC+TGG | + | chr1_3:6212626-6212645 | None:intergenic | 25.0% |
| ! | TTCTTTCATGTAAATATTGC+AGG | - | chr1_3:6212656-6212675 | Msa0099890:intron | 25.0% |
| ! | AGATTCTTACAAATTTAGTC+AGG | - | chr1_3:6212706-6212725 | Msa0099890:intron | 25.0% |
| !!! | TTATCTGTTTTCTCTAGAAT+CGG | - | chr1_3:6212743-6212762 | Msa0099890:intron | 25.0% |
| !! | CTATACCTACTTTATTTAGA+AGG | - | chr1_3:6213357-6213376 | Msa0099890:intron | 25.0% |
| ! | ATGTACCTTCTAAATAAAGT+AGG | + | chr1_3:6213365-6213384 | None:intergenic | 25.0% |
| ! | CTAAAGGAAACTAAAGATTA+AGG | + | chr1_3:6213502-6213521 | None:intergenic | 25.0% |
| !! | GATTAGTTATCCTTATCAAT+CGG | + | chr1_3:6213574-6213593 | None:intergenic | 25.0% |
| ! | TAATAAGATTTCCTTGGATT+TGG | - | chr1_3:6213647-6213666 | Msa0099890:intron | 25.0% |
| !! | TTGAAATGATGTTACTTGAA+TGG | + | chr1_3:6213956-6213975 | None:intergenic | 25.0% |
| ! | TCAAGTAACATCATTTCAAA+TGG | - | chr1_3:6213957-6213976 | Msa0099890:intron | 25.0% |
| ! | AAATGGAACAAATTCAATTG+AGG | - | chr1_3:6213974-6213993 | Msa0099890:intron | 25.0% |
| ! | TCTTCAACAAGAAGAATATT+CGG | + | chr1_3:6214302-6214321 | None:intergenic | 25.0% |
| ! | TCAAAATAATGTCGTATGAA+TGG | + | chr1_3:6214427-6214446 | None:intergenic | 25.0% |
| !!! | TTCATACGACATTATTTTGA+TGG | - | chr1_3:6214427-6214446 | Msa0099890:intron | 25.0% |
| !!! | TTATGCGATTTTTTGTGATA+CGG | - | chr1_3:6214510-6214529 | Msa0099890:CDS | 25.0% |
| ! | TTCAAACAACAAAACTGATT+AGG | - | chr1_3:6214582-6214601 | Msa0099890:CDS | 25.0% |
| ! | CAATAAAAAAACTTAGGAAG+TGG | - | chr1_3:6214825-6214844 | Msa0099890:CDS | 25.0% |
| !! | TAGGAAGTGGTTTTTAATAT+TGG | - | chr1_3:6214838-6214857 | Msa0099890:CDS | 25.0% |
| TGATTGTATTGAAGACATGA+TGG | - | chr1_3:6209883-6209902 | Msa0099890:three_prime_UTR | 30.0% | |
| TTGAAGAGTTATCTTCAATG+TGG | - | chr1_3:6209909-6209928 | Msa0099890:CDS | 30.0% | |
| CAATTCAACATAGAAAAACC+AGG | - | chr1_3:6209962-6209981 | Msa0099890:CDS | 30.0% | |
| TTACTTCTTCCAACATATCT+TGG | + | chr1_3:6209994-6210013 | None:intergenic | 30.0% | |
| !! | AGCTGATTTTCAAAGACTAA+TGG | - | chr1_3:6210036-6210055 | Msa0099890:intron | 30.0% |
| TGGCTTATTTAATGCAACAT+TGG | - | chr1_3:6210095-6210114 | Msa0099890:intron | 30.0% | |
| GGCTTATTTAATGCAACATT+GGG | - | chr1_3:6210096-6210115 | Msa0099890:intron | 30.0% | |
| TTGACAATCTTAGCAAACAA+AGG | - | chr1_3:6210161-6210180 | Msa0099890:intron | 30.0% | |
| !! | TAAAGAGAATAATCGATTCG+AGG | - | chr1_3:6210216-6210235 | Msa0099890:intron | 30.0% |
| ! | AGTATGATACTGTTGTTTAC+TGG | - | chr1_3:6210374-6210393 | Msa0099890:CDS | 30.0% |
| !! | GCAAGATTTTGAAAAACAGT+TGG | - | chr1_3:6210408-6210427 | Msa0099890:intron | 30.0% |
| !! | AGATTTTGAAAAACAGTTGG+AGG | - | chr1_3:6210411-6210430 | Msa0099890:intron | 30.0% |
| ! | TCATAGCTTGCAAAAAATCT+TGG | - | chr1_3:6210809-6210828 | Msa0099890:CDS | 30.0% |
| ! | TTGCAAAAAATCTTGGTGTA+TGG | - | chr1_3:6210816-6210835 | Msa0099890:CDS | 30.0% |
| ! | GTTTTTCGTATCTATTAACC+AGG | - | chr1_3:6211118-6211137 | Msa0099890:CDS | 30.0% |
| GAATGTTAAAACAGAAATCC+TGG | + | chr1_3:6211139-6211158 | None:intergenic | 30.0% | |
| ! | TTTTCCAAGTTTACAAGAAG+AGG | - | chr1_3:6211210-6211229 | Msa0099890:CDS | 30.0% |
| ATTACCTCTTCTTGTAAACT+TGG | + | chr1_3:6211217-6211236 | None:intergenic | 30.0% | |
| ! | CAGAAATTTTATGCAGCTTT+TGG | + | chr1_3:6211298-6211317 | None:intergenic | 30.0% |
| ! | TACTTGCTCATAATTTTTCC+AGG | - | chr1_3:6211348-6211367 | Msa0099890:intron | 30.0% |
| ! | AAAGTTATTTCCTTCTTTGC+AGG | + | chr1_3:6211466-6211485 | None:intergenic | 30.0% |
| !!! | ACTTTTGAGACAGAACTATT+TGG | - | chr1_3:6211481-6211500 | Msa0099890:intron | 30.0% |
| GATTAAACCTGTAATGTGAA+TGG | + | chr1_3:6211770-6211789 | None:intergenic | 30.0% | |
| TTCTTGATCCATTGTAATAG+AGG | - | chr1_3:6211866-6211885 | Msa0099890:CDS | 30.0% | |
| TGATATACTTGATCTTTCCA+AGG | - | chr1_3:6212061-6212080 | Msa0099890:CDS | 30.0% | |
| AATAAGTCGAAAACATCTCA+TGG | - | chr1_3:6212227-6212246 | Msa0099890:intron | 30.0% | |
| ATGTATAGGAGCTATGAAAT+TGG | - | chr1_3:6212455-6212474 | Msa0099890:intron | 30.0% | |
| AATTGGAAGCTACAAAATTC+AGG | - | chr1_3:6212472-6212491 | Msa0099890:intron | 30.0% | |
| CAGAAAATGTTAACATTGGA+AGG | - | chr1_3:6212543-6212562 | Msa0099890:intron | 30.0% | |
| TACCTCAATAGGTATATCAT+CGG | + | chr1_3:6212577-6212596 | None:intergenic | 30.0% | |
| ! | GAAGTGTTATATACCTCAAT+AGG | + | chr1_3:6212588-6212607 | None:intergenic | 30.0% |
| !! | TATTTCAGCAAATGGATTGA+AGG | - | chr1_3:6212969-6212988 | Msa0099890:CDS | 30.0% |
| TTAAACACATGATTCTGGAT+AGG | + | chr1_3:6213072-6213091 | None:intergenic | 30.0% | |
| CATTGTTAAACACATGATTC+TGG | + | chr1_3:6213077-6213096 | None:intergenic | 30.0% | |
| ACTAGCAATATGTAAACAAC+TGG | - | chr1_3:6213433-6213452 | Msa0099890:CDS | 30.0% | |
| TTTACAGAAACCGATTGATA+AGG | - | chr1_3:6213561-6213580 | Msa0099890:CDS | 30.0% | |
| ! | TTTGGAACAGGTTGAATTAA+TGG | - | chr1_3:6213665-6213684 | Msa0099890:intron | 30.0% |
| ! | TTGGAACAGGTTGAATTAAT+GGG | - | chr1_3:6213666-6213685 | Msa0099890:intron | 30.0% |
| AAGCACGAAAGTTTATGTAA+TGG | - | chr1_3:6214071-6214090 | Msa0099890:intron | 30.0% | |
| CATGCACCTTATTATTATCA+TGG | + | chr1_3:6214109-6214128 | None:intergenic | 30.0% | |
| ! | TCGCATAATGTGTGAATTTT+AGG | + | chr1_3:6214498-6214517 | None:intergenic | 30.0% |
| ! | ATTAGGTCTTATGAAGAAAC+AGG | - | chr1_3:6214599-6214618 | Msa0099890:CDS | 30.0% |
| TTATGAAGAAACAGGCAATT+GGG | - | chr1_3:6214607-6214626 | Msa0099890:CDS | 30.0% | |
| !! | TTCAATTTTAGGAATGTCAC+TGG | + | chr1_3:6215012-6215031 | None:intergenic | 30.0% |
| ! | CAAGACACTCTTTCAATTTT+AGG | + | chr1_3:6215023-6215042 | None:intergenic | 30.0% |
| !! | AGTGTCTTGAAAAGTATCTA+AGG | - | chr1_3:6215034-6215053 | Msa0099890:CDS | 30.0% |
| ! | CTTTGAAAATCAGCTATAGC+TGG | + | chr1_3:6210031-6210050 | None:intergenic | 35.0% |
| AGATAAAGGGTCATCTCAAT+TGG | - | chr1_3:6210075-6210094 | Msa0099890:intron | 35.0% | |
| CAATCTTAGCAAACAAAGGA+AGG | - | chr1_3:6210165-6210184 | Msa0099890:intron | 35.0% | |
| GGAAGTTGAGCAAAGAAAAT+TGG | - | chr1_3:6210186-6210205 | Msa0099890:intron | 35.0% | |
| ! | TTCGAGGAAGAGATTAGTTA+TGG | - | chr1_3:6210232-6210251 | Msa0099890:intron | 35.0% |
| ! | TCGAGGAAGAGATTAGTTAT+GGG | - | chr1_3:6210233-6210252 | Msa0099890:intron | 35.0% |
| ! | CTGTTGTTTACTGGAAACAA+CGG | - | chr1_3:6210383-6210402 | Msa0099890:CDS | 35.0% |
| TCGGAGAGAGGATATATTAA+AGG | - | chr1_3:6210441-6210460 | Msa0099890:intron | 35.0% | |
| CAAAATGCACCTGTTGTTAT+TGG | - | chr1_3:6210568-6210587 | Msa0099890:CDS | 35.0% | |
| ACTCACTGTAATATACCTGA+TGG | + | chr1_3:6210594-6210613 | None:intergenic | 35.0% | |
| CATTACTTGCAAATGAAGCA+CGG | - | chr1_3:6210640-6210659 | Msa0099890:CDS | 35.0% | |
| !! | TTAAATACAAGTGTCGGTGT+CGG | + | chr1_3:6210712-6210731 | None:intergenic | 35.0% |
| CAAGCTATGAAACACGTATA+CGG | + | chr1_3:6210799-6210818 | None:intergenic | 35.0% | |
| ! | AAAAATCTTGGTGTATGGCT+TGG | - | chr1_3:6210821-6210840 | Msa0099890:CDS | 35.0% |
| ACATTCTGATTATCTCTTGC+AGG | - | chr1_3:6211153-6211172 | Msa0099890:CDS | 35.0% | |
| !! | CTGTTTTTCCTATAATGTCC+TGG | + | chr1_3:6211369-6211388 | None:intergenic | 35.0% |
| ! | ACAGATGTCGAAATTTTCAC+CGG | - | chr1_3:6211385-6211404 | Msa0099890:intron | 35.0% |
| ! | AAGAGAGAAGTAATGGAGAA+AGG | - | chr1_3:6211436-6211455 | Msa0099890:intron | 35.0% |
| TGGAGTAAACTATATGGGAA+TGG | - | chr1_3:6211561-6211580 | Msa0099890:CDS | 35.0% | |
| GATAATATCGAGAAAATCGC+AGG | - | chr1_3:6211666-6211685 | Msa0099890:intron | 35.0% | |
| GGTGAGAAAAAGAGAAAGAA+TGG | - | chr1_3:6211687-6211706 | Msa0099890:intron | 35.0% | |
| AGAAAGAATGGCAAAGCTAA+GGG | - | chr1_3:6211699-6211718 | Msa0099890:intron | 35.0% | |
| AATTGCAGTTCAGAAAGCAA+AGG | - | chr1_3:6211726-6211745 | Msa0099890:intron | 35.0% | |
| CATTGTCTCCTCTATTACAA+TGG | + | chr1_3:6211877-6211896 | None:intergenic | 35.0% | |
| AATGAGAGCAAAACAAATGC+TGG | - | chr1_3:6211893-6211912 | Msa0099890:CDS | 35.0% | |
| ! | TAAAGAGCAAAGACAGCTTT+TGG | - | chr1_3:6211995-6212014 | Msa0099890:CDS | 35.0% |
| TTGGATGTCATGTTATCTTC+AGG | - | chr1_3:6212014-6212033 | Msa0099890:CDS | 35.0% | |
| CATGTTATCTTCAGGAGATT+TGG | - | chr1_3:6212022-6212041 | Msa0099890:CDS | 35.0% | |
| ! | ACTGTTTTCATAAGCTGTGT+TGG | - | chr1_3:6212192-6212211 | Msa0099890:intron | 35.0% |
| CCTATACATAAGTTGTGTAG+TGG | + | chr1_3:6212444-6212463 | None:intergenic | 35.0% | |
| CCACTACACAACTTATGTAT+AGG | - | chr1_3:6212441-6212460 | Msa0099890:intron | 35.0% | |
| ATGTAAATATTGCAGGTCAC+TGG | - | chr1_3:6212663-6212682 | Msa0099890:intron | 35.0% | |
| !!! | CTGGAGATGTTTTAAGGATT+CGG | - | chr1_3:6212682-6212701 | Msa0099890:intron | 35.0% |
| !!! | TGTTTTCTCTAGAATCGGAT+TGG | - | chr1_3:6212748-6212767 | Msa0099890:intron | 35.0% |
| ! | AAGGAAGCACAAATAAAAGC+TGG | + | chr1_3:6212786-6212805 | None:intergenic | 35.0% |
| TCAGAACTACGATACTTAGA+GGG | + | chr1_3:6212814-6212833 | None:intergenic | 35.0% | |
| ATCAGAACTACGATACTTAG+AGG | + | chr1_3:6212815-6212834 | None:intergenic | 35.0% | |
| TTTACACATCAAGGCAAAGT+TGG | - | chr1_3:6212865-6212884 | Msa0099890:intron | 35.0% | |
| TTGGTGAGATTCTTCTTCTT+TGG | + | chr1_3:6212926-6212945 | None:intergenic | 35.0% | |
| AGAAGAAGAATCTCACCAAA+AGG | - | chr1_3:6212927-6212946 | Msa0099890:CDS | 35.0% | |
| ! | CATTTGCTGAAATAGTTGAC+TGG | + | chr1_3:6212963-6212982 | None:intergenic | 35.0% |
| CAGTCAACTATTTCAGCAAA+TGG | - | chr1_3:6212961-6212980 | Msa0099890:CDS | 35.0% | |
| TGATCACATCTCATACTTCT+GGG | + | chr1_3:6213015-6213034 | None:intergenic | 35.0% | |
| TTGATCACATCTCATACTTC+TGG | + | chr1_3:6213016-6213035 | None:intergenic | 35.0% | |
| ATTCAACTGAAACAACAGTG+TGG | - | chr1_3:6213157-6213176 | Msa0099890:intron | 35.0% | |
| CACAATTACTAACACATACC+TGG | + | chr1_3:6213219-6213238 | None:intergenic | 35.0% | |
| GTTGTAATGTGACACAGAAA+AGG | - | chr1_3:6213334-6213353 | Msa0099890:intron | 35.0% | |
| AAACAACTGGTAAACTCTTC+CGG | - | chr1_3:6213446-6213465 | Msa0099890:CDS | 35.0% | |
| GTCAAATGAAAATGCTTTGC+CGG | + | chr1_3:6213468-6213487 | None:intergenic | 35.0% | |
| ! | TGGAACAGGTTGAATTAATG+GGG | - | chr1_3:6213667-6213686 | Msa0099890:intron | 35.0% |
| GTATGGTAGTATGAATGTGA+AGG | + | chr1_3:6213733-6213752 | None:intergenic | 35.0% | |
| CACATTCATACTACCATACA+AGG | - | chr1_3:6213734-6213753 | Msa0099890:intron | 35.0% | |
| TGATGATCCAGATGATCTTT+CGG | - | chr1_3:6213779-6213798 | Msa0099890:intron | 35.0% | |
| AACTTGTGTGAGATTCTATG+AGG | + | chr1_3:6213900-6213919 | None:intergenic | 35.0% | |
| AGAATCTCACACAAGTTCAA+TGG | - | chr1_3:6213903-6213922 | Msa0099890:intron | 35.0% | |
| ! | ACACAAGTTCAATGGTTTTC+CGG | - | chr1_3:6213911-6213930 | Msa0099890:intron | 35.0% |
| TTTGAGTAAGAATCGTTGTC+CGG | + | chr1_3:6213933-6213952 | None:intergenic | 35.0% | |
| AACTTTCGTGCTTAGTTTCT+AGG | + | chr1_3:6214064-6214083 | None:intergenic | 35.0% | |
| CTCTACTTGCTTCATTACAT+TGG | + | chr1_3:6214163-6214182 | None:intergenic | 35.0% | |
| GTTTGACACTTTCACTTTAC+AGG | - | chr1_3:6214532-6214551 | Msa0099890:CDS | 35.0% | |
| GTTTACATGCCAGTTATGAA+TGG | - | chr1_3:6214557-6214576 | Msa0099890:CDS | 35.0% | |
| GTTTGAAGACCATTCATAAC+TGG | + | chr1_3:6214569-6214588 | None:intergenic | 35.0% | |
| CTTATGAAGAAACAGGCAAT+TGG | - | chr1_3:6214606-6214625 | Msa0099890:CDS | 35.0% | |
| CAAACAACAACAGACAACTT+AGG | - | chr1_3:6214752-6214771 | Msa0099890:CDS | 35.0% | |
| TCATCTGCATCAATATGAGA+TGG | + | chr1_3:6214921-6214940 | None:intergenic | 35.0% | |
| ACATCAGTTCCAACATCTTC+TGG | + | chr1_3:6209935-6209954 | None:intergenic | 40.0% | |
| GAAGATGTTGGAACTGATGT+TGG | - | chr1_3:6209935-6209954 | Msa0099890:CDS | 40.0% | |
| AACATATCTTGGTCTCTTCC+TGG | + | chr1_3:6209983-6210002 | None:intergenic | 40.0% | |
| AGGAAGAGACCAAGATATGT+TGG | - | chr1_3:6209982-6210001 | Msa0099890:CDS | 40.0% | |
| ! | CGAGGAAGAGATTAGTTATG+GGG | - | chr1_3:6210234-6210253 | Msa0099890:intron | 40.0% |
| ! | GAGGAAGAGATTAGTTATGG+GGG | - | chr1_3:6210235-6210254 | Msa0099890:intron | 40.0% |
| TGGACGATGCTTACTATACA+TGG | - | chr1_3:6210281-6210300 | Msa0099890:CDS | 40.0% | |
| CTATACATGGCAAGATCTAC+CGG | - | chr1_3:6210294-6210313 | Msa0099890:CDS | 40.0% | |
| TGAAAGACAATCATCACCTG+TGG | - | chr1_3:6210492-6210511 | Msa0099890:intron | 40.0% | |
| TCTCGAATTATTAGCGGTGT+CGG | - | chr1_3:6210749-6210768 | Msa0099890:CDS | 40.0% | |
| ATGAAACACGTATACGGACA+CGG | + | chr1_3:6210793-6210812 | None:intergenic | 40.0% | |
| TTCAATCTAAAAGGCCGACT+CGG | - | chr1_3:6210966-6210985 | Msa0099890:CDS | 40.0% | |
| !!! | CTTTTGAAGCTCTTGTTGCA+AGG | - | chr1_3:6211242-6211261 | Msa0099890:CDS | 40.0% |
| TGTAGAACCTGTGTTTAGCA+AGG | - | chr1_3:6211525-6211544 | Msa0099890:CDS | 40.0% | |
| GGGAATGGAAATAACAGATC+AGG | - | chr1_3:6211576-6211595 | Msa0099890:CDS | 40.0% | |
| GAGAAAGAATGGCAAAGCTA+AGG | - | chr1_3:6211698-6211717 | Msa0099890:intron | 40.0% | |
| ATGCTAACAACACCAGAAAG+TGG | + | chr1_3:6211945-6211964 | None:intergenic | 40.0% | |
| !! | ACTTTCTGGTGTTGTTAGCA+TGG | - | chr1_3:6211944-6211963 | Msa0099890:CDS | 40.0% |
| TTTCTAACCTGACTCAACCT+TGG | + | chr1_3:6212081-6212100 | None:intergenic | 40.0% | |
| TGTGAAGACTACACCTTGTT+TGG | - | chr1_3:6212154-6212173 | Msa0099890:intron | 40.0% | |
| TACAAAATTCAGGCCAAGAG+AGG | - | chr1_3:6212482-6212501 | Msa0099890:intron | 40.0% | |
| AGCCGATGATATACCTATTG+AGG | - | chr1_3:6212572-6212591 | Msa0099890:intron | 40.0% | |
| ! | AGGTCACTGGAGATGTTTTA+AGG | - | chr1_3:6212676-6212695 | Msa0099890:intron | 40.0% |
| AGAACTACGATACTTAGAGG+GGG | + | chr1_3:6212812-6212831 | None:intergenic | 40.0% | |
| CAGAACTACGATACTTAGAG+GGG | + | chr1_3:6212813-6212832 | None:intergenic | 40.0% | |
| GCTGTCAAGTTTACACATCA+AGG | - | chr1_3:6212856-6212875 | Msa0099890:intron | 40.0% | |
| !! | CTGGTTCTGGAACAACATAA+AGG | + | chr1_3:6212897-6212916 | None:intergenic | 40.0% |
| TCTTCTTCTTTGGCAAATGC+TGG | + | chr1_3:6212916-6212935 | None:intergenic | 40.0% | |
| ACACATGATTCTGGATAGGA+TGG | + | chr1_3:6213068-6213087 | None:intergenic | 40.0% | |
| ! | GATTTCCTTGGATTTGGAAC+AGG | - | chr1_3:6213653-6213672 | Msa0099890:intron | 40.0% |
| TTCAACCTGTTCCAAATCCA+AGG | + | chr1_3:6213661-6213680 | None:intergenic | 40.0% | |
| ! | GGAACAGGTTGAATTAATGG+GGG | - | chr1_3:6213668-6213687 | Msa0099890:intron | 40.0% |
| ! | GAACAGGTTGAATTAATGGG+GGG | - | chr1_3:6213669-6213688 | Msa0099890:intron | 40.0% |
| GTGACTAGCAAAGAACATTG+TGG | - | chr1_3:6213702-6213721 | Msa0099890:intron | 40.0% | |
| CAAGCTGTTGAAACCTTGTA+TGG | + | chr1_3:6213750-6213769 | None:intergenic | 40.0% | |
| TTGGAATTGGAAGAATCCCT+CGG | + | chr1_3:6213832-6213851 | None:intergenic | 40.0% | |
| CAATTCCAACCACGAACTTT+GGG | - | chr1_3:6213843-6213862 | Msa0099890:intron | 40.0% | |
| GTGCATGATAGCTTACCAAA+TGG | - | chr1_3:6214122-6214141 | Msa0099890:intron | 40.0% | |
| CTAGAGTTTGCACTACCATT+TGG | + | chr1_3:6214140-6214159 | None:intergenic | 40.0% | |
| TGAACCACAACAAACATGTC+AGG | - | chr1_3:6214208-6214227 | Msa0099890:intron | 40.0% | |
| GAACCACAACAAACATGTCA+GGG | - | chr1_3:6214209-6214228 | Msa0099890:intron | 40.0% | |
| AACAAACATGTCAGGGTCAA+GGG | - | chr1_3:6214216-6214235 | Msa0099890:intron | 40.0% | |
| ! | ATTCGGCTTTAACGTCGATT+TGG | + | chr1_3:6214285-6214304 | None:intergenic | 40.0% |
| AAGTCAATGATGAAGCAGCT+AGG | - | chr1_3:6214347-6214366 | Msa0099890:intron | 40.0% | |
| AGCATGGATGTCGTGAATAA+TGG | - | chr1_3:6214374-6214393 | Msa0099890:intron | 40.0% | |
| !! | AATGTGGATGCGCTTTTTAG+GGG | + | chr1_3:6214693-6214712 | None:intergenic | 40.0% |
| !! | CAATGTGGATGCGCTTTTTA+GGG | + | chr1_3:6214694-6214713 | None:intergenic | 40.0% |
| !! | ACAATGTGGATGCGCTTTTT+AGG | + | chr1_3:6214695-6214714 | None:intergenic | 40.0% |
| TGTATCCTTGCACACAATTG+CGG | + | chr1_3:6214799-6214818 | None:intergenic | 40.0% | |
| TCAATGTGGCCAGAAGATGT+TGG | - | chr1_3:6209923-6209942 | Msa0099890:CDS | 45.0% | |
| ! | GCAACATTGGGAGTATAAGC+AGG | - | chr1_3:6210108-6210127 | Msa0099890:intron | 45.0% |
| CAAACGTCCGGTTTCGATAT+TGG | - | chr1_3:6210261-6210280 | Msa0099890:CDS | 45.0% | |
| GCATCGTCCAATATCGAAAC+CGG | + | chr1_3:6210271-6210290 | None:intergenic | 45.0% | |
| AACAGTTGGAGGCGAGTATT+CGG | - | chr1_3:6210422-6210441 | Msa0099890:intron | 45.0% | |
| AAGACAATCATCACCTGTGG+AGG | - | chr1_3:6210495-6210514 | Msa0099890:intron | 45.0% | |
| ! | ACCTGTTGTTATTGGCCATC+AGG | - | chr1_3:6210576-6210595 | Msa0099890:CDS | 45.0% |
| ACCTGATGGCCAATAACAAC+AGG | + | chr1_3:6210580-6210599 | None:intergenic | 45.0% | |
| TCCACTTTACAACACCGAGT+CGG | + | chr1_3:6210983-6211002 | None:intergenic | 45.0% | |
| AGCAAGGCAGGTGAAACAAT+TGG | - | chr1_3:6211541-6211560 | Msa0099890:CDS | 45.0% | |
| ! | GAGATAAGATCGCCACTTTC+TGG | - | chr1_3:6211930-6211949 | Msa0099890:CDS | 45.0% |
| GATCTTTCCAAGGTTGAGTC+AGG | - | chr1_3:6212071-6212090 | Msa0099890:CDS | 45.0% | |
| AAGCTGTGTTGGAGAGCTTA+TGG | - | chr1_3:6212203-6212222 | Msa0099890:intron | 45.0% | |
| ACATGCCTTACTACCTCTCT+TGG | + | chr1_3:6212498-6212517 | None:intergenic | 45.0% | |
| !! | TCTTTGGCAAATGCTGGTTC+TGG | + | chr1_3:6212910-6212929 | None:intergenic | 45.0% |
| !!! | ACTGGTCTTCTGTGACCTTT+TGG | + | chr1_3:6212945-6212964 | None:intergenic | 45.0% |
| CATCTCATACTTCTGGGTGA+TGG | + | chr1_3:6213009-6213028 | None:intergenic | 45.0% | |
| GATGTGTACGACACTGGAAT+TGG | - | chr1_3:6213189-6213208 | Msa0099890:CDS | 45.0% | |
| GCAGACCATGCTCGAAAATA+TGG | - | chr1_3:6213395-6213414 | Msa0099890:CDS | 45.0% | |
| GACCATGCTCGAAAATATGG+AGG | - | chr1_3:6213398-6213417 | Msa0099890:CDS | 45.0% | |
| !! | TGCCTCCATATTTTCGAGCA+TGG | + | chr1_3:6213403-6213422 | None:intergenic | 45.0% |
| ! | AAATATGGAGGCACAGGTCT+AGG | - | chr1_3:6213410-6213429 | Msa0099890:CDS | 45.0% |
| TCGACATCCGAAAGATCATC+TGG | + | chr1_3:6213789-6213808 | None:intergenic | 45.0% | |
| TAACGAAGATGACACAACCG+AGG | - | chr1_3:6213812-6213831 | Msa0099890:intron | 45.0% | |
| AACGAAGATGACACAACCGA+GGG | - | chr1_3:6213813-6213832 | Msa0099890:intron | 45.0% | |
| CCAAAGTTCGTGGTTGGAAT+TGG | + | chr1_3:6213845-6213864 | None:intergenic | 45.0% | |
| CCAATTCCAACCACGAACTT+TGG | - | chr1_3:6213842-6213861 | Msa0099890:intron | 45.0% | |
| !! | GGCTCGCTTTTCACTTCTAA+TGG | - | chr1_3:6213864-6213883 | Msa0099890:intron | 45.0% |
| ! | TCACTTCTAATGGATCCACC+AGG | - | chr1_3:6213874-6213893 | Msa0099890:intron | 45.0% |
| ! | TGACCCTGACATGTTTGTTG+TGG | + | chr1_3:6214215-6214234 | None:intergenic | 45.0% |
| CAACAAACATGTCAGGGTCA+AGG | - | chr1_3:6214215-6214234 | Msa0099890:intron | 45.0% | |
| GAAGCAGCTAGGATATAGCA+TGG | - | chr1_3:6214358-6214377 | Msa0099890:intron | 45.0% | |
| ! | GGATGTCGTGAATAATGGAG+TGG | - | chr1_3:6214379-6214398 | Msa0099890:intron | 45.0% |
| !! | ATGTGGATGCGCTTTTTAGG+GGG | + | chr1_3:6214692-6214711 | None:intergenic | 45.0% |
| AAAGCGCATCCACATTGTTG+CGG | - | chr1_3:6214697-6214716 | Msa0099890:CDS | 45.0% | |
| AATTGCTCACCGCAACAATG+TGG | + | chr1_3:6214709-6214728 | None:intergenic | 45.0% | |
| GCTGAAGAATGTTTCGCCAA+CGG | - | chr1_3:6214964-6214983 | Msa0099890:CDS | 45.0% | |
| AGAATGTTTCGCCAACGGTA+TGG | - | chr1_3:6214969-6214988 | Msa0099890:CDS | 45.0% | |
| TTATGGGGGAGACAAACGTC+CGG | - | chr1_3:6210249-6210268 | Msa0099890:CDS | 50.0% | |
| TACATGGCAAGATCTACCGG+CGG | - | chr1_3:6210297-6210316 | Msa0099890:CDS | 50.0% | |
| !! | TCACTTTTCCTTATCGCCGC+CGG | + | chr1_3:6210316-6210335 | None:intergenic | 50.0% |
| ATCTGTGACAGTTCCTCCAC+AGG | + | chr1_3:6210511-6210530 | None:intergenic | 50.0% | |
| AATGAAGCACGGACACTCCT+CGG | - | chr1_3:6210651-6210670 | Msa0099890:CDS | 50.0% | |
| GACTGCAGAGTAGCTACTTG+GGG | + | chr1_3:6211039-6211058 | None:intergenic | 50.0% | |
| CGACTGCAGAGTAGCTACTT+GGG | + | chr1_3:6211040-6211059 | None:intergenic | 50.0% | |
| CCAAGTAGCTACTCTGCAGT+CGG | - | chr1_3:6211038-6211057 | Msa0099890:CDS | 50.0% | |
| GTCGGAGACGTAAGGACTAT+TGG | - | chr1_3:6211056-6211075 | Msa0099890:CDS | 50.0% | |
| ! | GTCGAAATTTTCACCGGAGC+AGG | - | chr1_3:6211391-6211410 | Msa0099890:intron | 50.0% |
| AGATTCCTTCACACCTGCTC+CGG | + | chr1_3:6211407-6211426 | None:intergenic | 50.0% | |
| !! | GAAAGGAGTGCCTGCAAAGA+AGG | - | chr1_3:6211453-6211472 | Msa0099890:intron | 50.0% |
| GAACCTGTGTTTAGCAAGGC+AGG | - | chr1_3:6211529-6211548 | Msa0099890:CDS | 50.0% | |
| TCACCTGCCTTGCTAAACAC+AGG | + | chr1_3:6211535-6211554 | None:intergenic | 50.0% | |
| TCAGGCCAAGAGAGGTAGTA+AGG | - | chr1_3:6212490-6212509 | Msa0099890:intron | 50.0% | |
| CGATACTTAGAGGGGGTAGA+AGG | + | chr1_3:6212805-6212824 | None:intergenic | 50.0% | |
| CGTTGTGATGTGTACGACAC+TGG | - | chr1_3:6213183-6213202 | Msa0099890:intron | 50.0% | |
| GACACTGGAATTGGCATACC+AGG | - | chr1_3:6213198-6213217 | Msa0099890:CDS | 50.0% | |
| ! | GCTCGAAAATATGGAGGCAC+AGG | - | chr1_3:6213404-6213423 | Msa0099890:CDS | 50.0% |
| AAAAGCGAGCCCAAAGTTCG+TGG | + | chr1_3:6213855-6213874 | None:intergenic | 50.0% | |
| TGAGATTCTATGAGGCCTGG+TGG | + | chr1_3:6213892-6213911 | None:intergenic | 50.0% | |
| GTGTGAGATTCTATGAGGCC+TGG | + | chr1_3:6213895-6213914 | None:intergenic | 50.0% | |
| AACATGTCAGGGTCAAGGGA+AGG | - | chr1_3:6214220-6214239 | Msa0099890:intron | 50.0% | |
| AGTCTCCGCAATTGTGTGCA+AGG | - | chr1_3:6214791-6214810 | Msa0099890:CDS | 50.0% | |
| CACAAATGCGTCCATACCGT+TGG | + | chr1_3:6214983-6215002 | None:intergenic | 50.0% | |
| GGAGTATAAGCAGGCGAACG+CGG | - | chr1_3:6210117-6210136 | Msa0099890:intron | 55.0% | |
| ATAAGCAGGCGAACGCGGTT+CGG | - | chr1_3:6210122-6210141 | Msa0099890:intron | 55.0% | |
| AAGATCTACCGGCGGCGATA+AGG | - | chr1_3:6210305-6210324 | Msa0099890:CDS | 55.0% | |
| TGTCGGACACGACATGTGTC+CGG | + | chr1_3:6210695-6210714 | None:intergenic | 55.0% | |
| ACGTATACGGACACGGACAC+CGG | + | chr1_3:6210786-6210805 | None:intergenic | 55.0% | |
| !! | GCCGACTCGGTGTTGTAAAG+TGG | - | chr1_3:6210979-6210998 | Msa0099890:CDS | 55.0% |
| CCGACTGCAGAGTAGCTACT+TGG | + | chr1_3:6211041-6211060 | None:intergenic | 55.0% | |
| ACTCTGCAGTCGGAGACGTA+AGG | - | chr1_3:6211048-6211067 | Msa0099890:CDS | 55.0% | |
| TTTCACCGGAGCAGGTGTGA+AGG | - | chr1_3:6211399-6211418 | Msa0099890:intron | 55.0% | |
| !! | ATGGCTCTGAACTGCGCGTA+TGG | + | chr1_3:6214408-6214427 | None:intergenic | 55.0% |
| TGGGATGCTGCAAGAGAAGC+TGG | - | chr1_3:6214626-6214645 | Msa0099890:CDS | 55.0% | |
| GGAGGCGAGTATTCGGAGAG+AGG | - | chr1_3:6210429-6210448 | Msa0099890:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr1_3:6210657-6210676 | Msa0099890:CDS | 60.0% | |
| ACTGGGACACGCCTAATCCG+AGG | + | chr1_3:6210671-6210690 | None:intergenic | 60.0% | |
| GATTAGGCGTGTCCCAGTGC+CGG | - | chr1_3:6210673-6210692 | Msa0099890:CDS | 60.0% | |
| CACGACATGTGTCCGGCACT+GGG | + | chr1_3:6210688-6210707 | None:intergenic | 60.0% | |
| ACACGACATGTGTCCGGCAC+TGG | + | chr1_3:6210689-6210708 | None:intergenic | 60.0% | |
| !! | GCAATGGTGCTGCAGCTGTC+TGG | + | chr1_3:6212524-6212543 | None:intergenic | 60.0% |
| GCGAGCCCAAAGTTCGTGGT+TGG | + | chr1_3:6213851-6213870 | None:intergenic | 60.0% | |
| !! | GGTGTCGGCGTGTCAGTGTC+CGG | - | chr1_3:6210764-6210783 | Msa0099890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 6209863 | 6215104 | 6209863 | ID=Msa0099890;Name=Msa0099890 |
| chr1_3 | mRNA | 6209863 | 6215104 | 6209863 | ID=Msa0099890-mRNA-1;Parent=Msa0099890;Name=Msa0099890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.2|0.18|1|0.9|0.90|11|45|941 |
| chr1_3 | exon | 6209863 | 6210030 | 6209863 | ID=Msa0099890-mRNA-1:exon:2368;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6210249 | 6210413 | 6210249 | ID=Msa0099890-mRNA-1:exon:2367;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6210519 | 6211292 | 6210519 | ID=Msa0099890-mRNA-1:exon:2366;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6211513 | 6211616 | 6211513 | ID=Msa0099890-mRNA-1:exon:2365;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6211748 | 6212115 | 6211748 | ID=Msa0099890-mRNA-1:exon:2364;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6212240 | 6212289 | 6212240 | ID=Msa0099890-mRNA-1:exon:2363;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6212374 | 6212438 | 6212374 | ID=Msa0099890-mRNA-1:exon:2362;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6212875 | 6213081 | 6212875 | ID=Msa0099890-mRNA-1:exon:2361;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6213186 | 6213279 | 6213186 | ID=Msa0099890-mRNA-1:exon:2360;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6213370 | 6213597 | 6213370 | ID=Msa0099890-mRNA-1:exon:2359;Parent=Msa0099890-mRNA-1 |
| chr1_3 | exon | 6214457 | 6215104 | 6214457 | ID=Msa0099890-mRNA-1:exon:2358;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6214457 | 6215104 | 6214457 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6213370 | 6213597 | 6213370 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6213186 | 6213279 | 6213186 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6212875 | 6213081 | 6212875 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6212374 | 6212438 | 6212374 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6212240 | 6212289 | 6212240 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6211748 | 6212115 | 6211748 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6211513 | 6211616 | 6211513 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6210519 | 6211292 | 6210519 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6210249 | 6210413 | 6210249 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | CDS | 6209908 | 6210030 | 6209908 | ID=Msa0099890-mRNA-1:cds;Parent=Msa0099890-mRNA-1 |
| chr1_3 | three_prime_UTR | 6209863 | 6209907 | 6209863 | ID=Msa0099890-mRNA-1:three_prime_utr;Parent=Msa0099890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
