Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471880 | XP_019433617.1 | 100.000 | 117 | 0 | 0 | 1 | 117 | 17 | 133 | 3.16e-80 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471880 | sp|P49636|RL40_NICSY | 98.291 | 117 | 2 | 0 | 1 | 117 | 12 | 128 | 8.72e-82 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471880 | A0A022R0F0 | 100.000 | 117 | 0 | 0 | 1 | 117 | 12 | 128 | 2.14e-80 | 241 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002790 | Msa0471880 | 0.814906 | 1.213279e-51 | -8.615850e-47 |
| Msa0027590 | Msa0471880 | 0.813083 | 3.063190e-51 | -8.615850e-47 |
| Msa0044890 | Msa0471880 | 0.829255 | 5.701451e-55 | -8.615850e-47 |
| Msa0068970 | Msa0471880 | 0.835872 | 1.302644e-56 | -8.615850e-47 |
| Msa0075350 | Msa0471880 | 0.815883 | 7.359637e-52 | -8.615850e-47 |
| Msa0114570 | Msa0471880 | 0.803889 | 2.810611e-49 | -8.615850e-47 |
| Msa0116670 | Msa0471880 | 0.831337 | 1.767259e-55 | -8.615850e-47 |
| Msa0128330 | Msa0471880 | 0.820488 | 6.678993e-53 | -8.615850e-47 |
| Msa0128750 | Msa0471880 | 0.838049 | 3.622166e-57 | -8.615850e-47 |
| Msa0173530 | Msa0471880 | 0.831733 | 1.412196e-55 | -8.615850e-47 |
| Msa0174580 | Msa0471880 | 0.810806 | 9.599281e-51 | -8.615850e-47 |
| Msa0183090 | Msa0471880 | 0.826337 | 2.867421e-54 | -8.615850e-47 |
| Msa0186740 | Msa0471880 | 0.847669 | 9.992741e-60 | -8.615850e-47 |
| Msa0191450 | Msa0471880 | 0.871149 | 8.516405e-67 | -8.615850e-47 |
| Msa0191550 | Msa0471880 | 0.858863 | 6.151922e-63 | -8.615850e-47 |
| Msa0194940 | Msa0471880 | 0.871161 | 8.435281e-67 | -8.615850e-47 |
| Msa0210330 | Msa0471880 | 0.807141 | 5.843281e-50 | -8.615850e-47 |
| Msa0210360 | Msa0471880 | 0.861006 | 1.388661e-63 | -8.615850e-47 |
| Msa0217620 | Msa0471880 | 0.819888 | 9.169148e-53 | -8.615850e-47 |
| Msa0222730 | Msa0471880 | 0.812005 | 5.270825e-51 | -8.615850e-47 |
| Msa0369410 | Msa0471880 | 0.818929 | 1.516437e-52 | -8.615850e-47 |
| Msa0426250 | Msa0471880 | 0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa0463520 | Msa0471880 | 0.821287 | 4.375209e-53 | -8.615850e-47 |
| Msa0471880 | Msa0481520 | 0.839065 | 1.979571e-57 | -8.615850e-47 |
| Msa0471880 | Msa0481850 | 0.855400 | 6.469455e-62 | -8.615850e-47 |
| Msa0471880 | Msa0486070 | 0.824091 | 9.736532e-54 | -8.615850e-47 |
| Msa0471880 | Msa0529900 | 0.828618 | 8.133110e-55 | -8.615850e-47 |
| Msa0471880 | Msa0540480 | 0.829981 | 3.797352e-55 | -8.615850e-47 |
| Msa0471880 | Msa0550420 | 0.864626 | 1.062007e-64 | -8.615850e-47 |
| Msa0471880 | Msa0584030 | 0.875999 | 1.978295e-68 | -8.615850e-47 |
| Msa0471880 | Msa0591050 | 0.807167 | 5.769124e-50 | -8.615850e-47 |
| Msa0471880 | Msa0605890 | 0.800701 | 1.273817e-48 | -8.615850e-47 |
| Msa0471880 | Msa0653060 | 0.830526 | 2.794373e-55 | -8.615850e-47 |
| Msa0471880 | Msa0686550 | 0.804088 | 2.555231e-49 | -8.615850e-47 |
| Msa0471880 | Msa0705800 | 0.885266 | 9.429317e-72 | -8.615850e-47 |
| Msa0471880 | Msa0712610 | 0.845826 | 3.187091e-59 | -8.615850e-47 |
| Msa0471880 | Msa0717380 | 0.836331 | 9.962604e-57 | -8.615850e-47 |
| Msa0471880 | Msa0729200 | 0.802380 | 5.766944e-49 | -8.615850e-47 |
| Msa0471880 | Msa0752910 | 0.819535 | 1.103754e-52 | -8.615850e-47 |
| Msa0471880 | Msa0788380 | 0.838009 | 3.709674e-57 | -8.615850e-47 |
| Msa0471880 | Msa0792420 | 0.819490 | 1.130356e-52 | -8.615850e-47 |
| Msa0471880 | Msa0799830 | 0.826405 | 2.761923e-54 | -8.615850e-47 |
| Msa0471880 | Msa0861320 | 0.826525 | 2.586401e-54 | -8.615850e-47 |
| Msa0471880 | Msa0876170 | 0.846785 | 1.746670e-59 | -8.615850e-47 |
| Msa0471880 | Msa0915540 | 0.845559 | 3.765635e-59 | -8.615850e-47 |
| Msa0471880 | Msa0945480 | 0.810644 | 1.040168e-50 | -8.615850e-47 |
| Msa0471880 | Msa1037290 | 0.844089 | 9.379442e-59 | -8.615850e-47 |
| Msa0471880 | Msa1040160 | 0.814252 | 1.693994e-51 | -8.615850e-47 |
| Msa0471880 | Msa1041680 | 0.855906 | 4.607619e-62 | -8.615850e-47 |
| Msa0471880 | Msa1078870 | 0.863350 | 2.650338e-64 | -8.615850e-47 |
| Msa0471880 | Msa1078980 | 0.820607 | 6.273799e-53 | -8.615850e-47 |
| Msa0471880 | Msa1080350 | 0.866841 | 2.122011e-65 | -8.615850e-47 |
| Msa0471880 | Msa1096900 | 0.801998 | 6.909813e-49 | -8.615850e-47 |
| Msa0471880 | Msa1124850 | 0.803964 | 2.710791e-49 | -8.615850e-47 |
| Msa0471880 | Msa1125860 | 0.859367 | 4.345650e-63 | -8.615850e-47 |
| Msa0471880 | Msa1126060 | 0.859786 | 3.250388e-63 | -8.615850e-47 |
| Msa0471880 | Msa1126520 | 0.834864 | 2.342386e-56 | -8.615850e-47 |
| Msa0471880 | Msa1164150 | 0.837318 | 5.577471e-57 | -8.615850e-47 |
| Msa0471880 | Msa1166570 | 0.857310 | 1.781044e-62 | -8.615850e-47 |
| Msa0471880 | Msa1167540 | 0.843476 | 1.368869e-58 | -8.615850e-47 |
| Msa0471880 | Msa1169180 | 0.818841 | 1.588025e-52 | -8.615850e-47 |
| Msa0471880 | Msa1256840 | 0.826939 | 2.059551e-54 | -8.615850e-47 |
| Msa0471880 | Msa1258540 | 0.821953 | 3.069089e-53 | -8.615850e-47 |
| Msa0471880 | Msa1295150 | 0.812044 | 5.168555e-51 | -8.615850e-47 |
| Msa0471880 | Msa1311400 | 0.888233 | 7.077819e-73 | -8.615850e-47 |
| Msa0471880 | Msa1332250 | 0.855317 | 6.840264e-62 | -8.615850e-47 |
| Msa0471880 | Msa1338190 | 0.807680 | 4.491492e-50 | -8.615850e-47 |
| Msa0471880 | Msa1356790 | 0.838619 | 2.581659e-57 | -8.615850e-47 |
| Msa0471880 | Msa1368920 | 0.842947 | 1.894053e-58 | -8.615850e-47 |
| Msa0471880 | Msa1374240 | 0.848727 | 5.098574e-60 | -8.615850e-47 |
| Msa0471880 | Msa1392590 | 0.806796 | 6.913653e-50 | -8.615850e-47 |
| Msa0471880 | Msa1397100 | 0.999001 | 1.858015e-285 | -8.615850e-47 |
| Msa0471880 | Msa1403910 | 0.979723 | 1.344466e-148 | -8.615850e-47 |
| Msa0471880 | Msa1418770 | 0.865834 | 4.429717e-65 | -8.615850e-47 |
| Msa0471880 | Msa1426120 | 0.862621 | 4.451582e-64 | -8.615850e-47 |
| Msa0471880 | Msa1426490 | 0.857448 | 1.620730e-62 | -8.615850e-47 |
| Msa0471880 | Msa1446410 | 0.829454 | 5.100517e-55 | -8.615850e-47 |
| Msa0471880 | Msa1463570 | 0.825793 | 3.861447e-54 | -8.615850e-47 |
| Msa0257450 | Msa0471880 | 0.822981 | 1.770967e-53 | -8.615850e-47 |
| Msa0296720 | Msa0471880 | 0.827331 | 1.659660e-54 | -8.615850e-47 |
| Msa0297830 | Msa0471880 | 0.850807 | 1.337027e-60 | -8.615850e-47 |
| Msa0298870 | Msa0471880 | 0.823179 | 1.592531e-53 | -8.615850e-47 |
| Msa0301220 | Msa0471880 | 0.809306 | 2.020037e-50 | -8.615850e-47 |
| Msa0312210 | Msa0471880 | 0.816798 | 4.592217e-52 | -8.615850e-47 |
| Msa0315430 | Msa0471880 | 0.824808 | 6.602968e-54 | -8.615850e-47 |
| Msa0335840 | Msa0471880 | 0.862807 | 3.900052e-64 | -8.615850e-47 |
| Msa0341880 | Msa0471880 | 0.816909 | 4.336610e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471880 | MtrunA17_Chr7g0266661 | 100.000 | 117 | 0 | 0 | 1 | 117 | 12 | 128 | 4.13e-84 | 241 |
| Msa0471880 | MtrunA17_Chr1g0178381 | 100.000 | 117 | 0 | 0 | 1 | 117 | 12 | 128 | 4.13e-84 | 241 |
| Msa0471880 | MtrunA17_Chr3g0127481 | 100.000 | 117 | 0 | 0 | 1 | 117 | 12 | 128 | 4.13e-84 | 241 |
| Msa0471880 | MtrunA17_Chr6g0475951 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 1.19e-42 | 134 |
| Msa0471880 | MtrunA17_Chr6g0475961 | 98.485 | 66 | 1 | 0 | 1 | 66 | 15 | 80 | 1.35e-41 | 135 |
| Msa0471880 | MtrunA17_Chr6g0475961 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 1.35e-41 | 135 |
| Msa0471880 | MtrunA17_Chr4g0037241 | 97.015 | 67 | 2 | 0 | 1 | 67 | 12 | 78 | 1.62e-41 | 134 |
| Msa0471880 | MtrunA17_Chr4g0037241 | 59.375 | 64 | 26 | 0 | 2 | 65 | 89 | 152 | 8.14e-22 | 84.3 |
| Msa0471880 | MtrunA17_Chr5g0444101 | 97.015 | 67 | 2 | 0 | 1 | 67 | 12 | 78 | 1.62e-41 | 134 |
| Msa0471880 | MtrunA17_Chr5g0444101 | 59.375 | 64 | 26 | 0 | 2 | 65 | 89 | 152 | 8.14e-22 | 84.3 |
| Msa0471880 | MtrunA17_Chr8g0380181 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.09e-41 | 134 |
| Msa0471880 | MtrunA17_Chr5g0413361 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.28e-41 | 134 |
| Msa0471880 | MtrunA17_Chr7g0274921 | 98.485 | 66 | 1 | 0 | 1 | 66 | 14 | 79 | 5.13e-41 | 135 |
| Msa0471880 | MtrunA17_Chr7g0274921 | 98.485 | 66 | 1 | 0 | 1 | 66 | 90 | 155 | 5.13e-41 | 135 |
| Msa0471880 | MtrunA17_Chr7g0274921 | 98.485 | 66 | 1 | 0 | 1 | 66 | 166 | 231 | 6.80e-41 | 135 |
| Msa0471880 | MtrunA17_Chr1g0181441 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.66e-41 | 135 |
| Msa0471880 | MtrunA17_Chr1g0181441 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.66e-41 | 135 |
| Msa0471880 | MtrunA17_Chr1g0181441 | 100.000 | 65 | 0 | 0 | 1 | 65 | 164 | 228 | 1.21e-40 | 134 |
| Msa0471880 | MtrunA17_Chr4g0041751 | 96.970 | 66 | 2 | 0 | 1 | 66 | 88 | 153 | 1.41e-40 | 134 |
| Msa0471880 | MtrunA17_Chr4g0041751 | 96.970 | 66 | 2 | 0 | 1 | 66 | 12 | 77 | 2.67e-40 | 133 |
| Msa0471880 | MtrunA17_Chr4g0041751 | 66.154 | 65 | 22 | 0 | 1 | 65 | 164 | 228 | 8.29e-23 | 88.6 |
| Msa0471880 | MtrunA17_Chr8g0377821 | 98.485 | 66 | 1 | 0 | 1 | 66 | 20 | 85 | 2.00e-39 | 135 |
| Msa0471880 | MtrunA17_Chr8g0377821 | 98.485 | 66 | 1 | 0 | 1 | 66 | 96 | 161 | 2.00e-39 | 135 |
| Msa0471880 | MtrunA17_Chr8g0377821 | 98.485 | 66 | 1 | 0 | 1 | 66 | 172 | 237 | 2.00e-39 | 135 |
| Msa0471880 | MtrunA17_Chr8g0377821 | 98.485 | 66 | 1 | 0 | 1 | 66 | 248 | 313 | 2.00e-39 | 135 |
| Msa0471880 | MtrunA17_Chr8g0377821 | 100.000 | 65 | 0 | 0 | 1 | 65 | 324 | 388 | 3.12e-39 | 134 |
| Msa0471880 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 15 | 80 | 4.92e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 4.92e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 167 | 232 | 4.92e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 243 | 308 | 4.92e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 319 | 384 | 4.92e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046801 | 98.485 | 66 | 1 | 0 | 1 | 66 | 395 | 460 | 6.52e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 16 | 81 | 5.53e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 92 | 157 | 5.53e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 168 | 233 | 5.53e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 244 | 309 | 5.53e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 320 | 385 | 5.53e-39 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041641 | 98.485 | 66 | 1 | 0 | 1 | 66 | 396 | 461 | 7.25e-39 | 135 |
| Msa0471880 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 15 | 80 | 1.21e-38 | 135 |
| Msa0471880 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 1.21e-38 | 135 |
| Msa0471880 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 167 | 232 | 1.21e-38 | 135 |
| Msa0471880 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 243 | 308 | 1.21e-38 | 135 |
| Msa0471880 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 319 | 384 | 1.21e-38 | 135 |
| Msa0471880 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 395 | 460 | 1.21e-38 | 135 |
| Msa0471880 | MtrunA17_Chr8g0342711 | 98.485 | 66 | 1 | 0 | 1 | 66 | 471 | 536 | 1.58e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 1.26e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 1.26e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 1.26e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 1.26e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 1.26e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041701 | 98.485 | 66 | 1 | 0 | 1 | 66 | 392 | 457 | 1.26e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0041701 | 100.000 | 65 | 0 | 0 | 1 | 65 | 468 | 532 | 1.92e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 15 | 80 | 1.31e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 1.31e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 167 | 232 | 1.31e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 243 | 308 | 1.31e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 395 | 460 | 1.31e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0048591 | 98.485 | 66 | 1 | 0 | 1 | 66 | 471 | 536 | 1.72e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0048591 | 95.455 | 66 | 3 | 0 | 1 | 66 | 319 | 384 | 4.56e-37 | 131 |
| Msa0471880 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 91 | 156 | 1.93e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 167 | 232 | 1.93e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 243 | 308 | 1.93e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 379 | 444 | 1.93e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 455 | 520 | 1.93e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046831 | 98.485 | 66 | 1 | 0 | 1 | 66 | 531 | 596 | 2.48e-38 | 135 |
| Msa0471880 | MtrunA17_Chr4g0046831 | 96.970 | 66 | 2 | 0 | 1 | 66 | 15 | 80 | 5.09e-37 | 131 |
| Msa0471880 | MtrunA17_Chr4g0046831 | 74.242 | 66 | 1 | 1 | 1 | 66 | 319 | 368 | 5.14e-23 | 92.4 |
| Msa0471880 | MtrunA17_Chr8g0374171 | 96.774 | 62 | 2 | 0 | 5 | 66 | 89 | 150 | 1.70e-36 | 122 |
| Msa0471880 | MtrunA17_Chr8g0374171 | 91.429 | 35 | 3 | 0 | 32 | 66 | 40 | 74 | 2.11e-15 | 68.2 |
| Msa0471880 | MtrunA17_Chr1g0169371 | 72.308 | 65 | 18 | 0 | 1 | 65 | 226 | 290 | 1.10e-22 | 89.7 |
| Msa0471880 | MtrunA17_Chr5g0433721 | 67.692 | 65 | 20 | 1 | 2 | 65 | 206 | 270 | 4.46e-21 | 85.1 |
| Msa0471880 | MtrunA17_Chr1g0169401 | 64.516 | 62 | 22 | 0 | 4 | 65 | 10 | 71 | 6.99e-21 | 79.3 |
| Msa0471880 | MtrunA17_Chr5g0424981 | 60.938 | 64 | 25 | 0 | 1 | 64 | 13 | 76 | 2.26e-20 | 78.6 |
| Msa0471880 | MtrunA17_Chr5g0433681 | 63.934 | 61 | 22 | 0 | 4 | 64 | 16 | 76 | 2.48e-20 | 78.2 |
| Msa0471880 | MtrunA17_Chr5g0428191 | 69.231 | 65 | 20 | 0 | 1 | 65 | 252 | 316 | 2.91e-20 | 83.6 |
| Msa0471880 | MtrunA17_Chr5g0433521 | 66.667 | 63 | 21 | 0 | 2 | 64 | 252 | 314 | 3.80e-20 | 83.2 |
| Msa0471880 | MtrunA17_Chr5g0433411 | 69.492 | 59 | 18 | 0 | 4 | 62 | 281 | 339 | 1.88e-19 | 81.6 |
| Msa0471880 | MtrunA17_Chr5g0433631 | 66.129 | 62 | 21 | 0 | 1 | 62 | 277 | 338 | 3.39e-19 | 80.9 |
| Msa0471880 | MtrunA17_Chr7g0259431 | 60.317 | 63 | 25 | 0 | 2 | 64 | 235 | 297 | 2.07e-18 | 78.2 |
| Msa0471880 | MtrunA17_Chr2g0298951 | 60.938 | 64 | 25 | 0 | 1 | 64 | 247 | 310 | 3.86e-18 | 77.8 |
| Msa0471880 | MtrunA17_Chr4g0003111 | 57.143 | 63 | 27 | 0 | 2 | 64 | 16 | 78 | 1.06e-17 | 71.6 |
| Msa0471880 | MtrunA17_Chr5g0433531 | 63.333 | 60 | 22 | 0 | 4 | 63 | 259 | 318 | 2.21e-17 | 75.9 |
| Msa0471880 | MtrunA17_Chr5g0433661 | 62.500 | 64 | 24 | 0 | 1 | 64 | 289 | 352 | 5.92e-17 | 74.7 |
| Msa0471880 | MtrunA17_Chr8g0374161 | 100.000 | 33 | 0 | 0 | 1 | 33 | 20 | 52 | 8.96e-17 | 68.6 |
| Msa0471880 | MtrunA17_Chr2g0298941 | 58.730 | 63 | 26 | 0 | 2 | 64 | 189 | 251 | 4.52e-16 | 71.2 |
| Msa0471880 | MtrunA17_Chr5g0433711 | 58.333 | 60 | 25 | 0 | 4 | 63 | 4 | 63 | 2.89e-15 | 65.1 |
| Msa0471880 | MtrunA17_Chr5g0433701 | 62.264 | 53 | 20 | 0 | 4 | 56 | 16 | 68 | 7.44e-15 | 64.7 |
| Msa0471880 | MtrunA17_Chr7g0223111 | 58.462 | 65 | 26 | 1 | 1 | 64 | 278 | 342 | 1.87e-13 | 65.1 |
| Msa0471880 | MtrunA17_Chr5g0433391 | 48.438 | 64 | 33 | 0 | 1 | 64 | 20 | 83 | 6.59e-13 | 59.7 |
| Msa0471880 | MtrunA17_Chr5g0433381 | 54.839 | 62 | 27 | 1 | 4 | 64 | 24 | 85 | 1.03e-12 | 58.9 |
| Msa0471880 | MtrunA17_Chr5g0424971 | 50.000 | 64 | 32 | 0 | 1 | 64 | 263 | 326 | 2.26e-12 | 62.0 |
| Msa0471880 | MtrunA17_Chr4g0041621 | 76.471 | 34 | 8 | 0 | 33 | 66 | 11 | 44 | 3.63e-12 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471880 | AT2G36170.1 | 98.291 | 117 | 2 | 0 | 1 | 117 | 12 | 128 | 1.67e-82 | 237 |
| Msa0471880 | AT3G52590.1 | 98.291 | 117 | 2 | 0 | 1 | 117 | 12 | 128 | 1.67e-82 | 237 |
| Msa0471880 | AT4G05320.7 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 1.09e-41 | 135 |
| Msa0471880 | AT4G05320.7 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 1.40e-41 | 134 |
| Msa0471880 | AT4G05050.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 1.09e-41 | 135 |
| Msa0471880 | AT4G05050.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 1.40e-41 | 134 |
| Msa0471880 | AT2G35635.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.33e-41 | 134 |
| Msa0471880 | AT2G35635.1 | 57.576 | 66 | 28 | 0 | 2 | 67 | 89 | 154 | 1.20e-21 | 84.3 |
| Msa0471880 | AT2G47110.2 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.41e-41 | 134 |
| Msa0471880 | AT2G47110.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.41e-41 | 134 |
| Msa0471880 | AT3G62250.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.78e-41 | 134 |
| Msa0471880 | AT1G23410.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.91e-41 | 134 |
| Msa0471880 | AT1G31340.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 12 | 76 | 2.94e-41 | 134 |
| Msa0471880 | AT1G31340.1 | 60.000 | 65 | 26 | 0 | 2 | 66 | 89 | 153 | 2.34e-22 | 86.3 |
| Msa0471880 | AT4G02890.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0471880 | AT4G02890.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0471880 | AT4G02890.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0471880 | AT4G02890.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0471880 | AT4G02890.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0471880 | AT4G02890.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0471880 | AT4G05050.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0471880 | AT4G05050.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0471880 | AT4G05050.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0471880 | AT4G05050.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0471880 | AT4G05050.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0471880 | AT4G05050.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0471880 | AT4G05050.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.32e-41 | 135 |
| Msa0471880 | AT4G05050.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 7.32e-41 | 135 |
| Msa0471880 | AT4G05050.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 9.50e-41 | 135 |
| Msa0471880 | AT1G55060.1 | 96.970 | 66 | 2 | 0 | 1 | 66 | 88 | 153 | 2.62e-40 | 134 |
| Msa0471880 | AT1G55060.1 | 96.923 | 65 | 2 | 0 | 1 | 65 | 164 | 228 | 3.55e-38 | 128 |
| Msa0471880 | AT1G55060.1 | 84.848 | 66 | 10 | 0 | 1 | 66 | 12 | 77 | 1.04e-34 | 119 |
| Msa0471880 | AT4G05320.5 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.40e-40 | 135 |
| Msa0471880 | AT4G05320.5 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.40e-40 | 135 |
| Msa0471880 | AT4G05320.5 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.40e-40 | 135 |
| Msa0471880 | AT4G05320.5 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 5.75e-40 | 135 |
| Msa0471880 | AT4G05320.8 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.40e-40 | 135 |
| Msa0471880 | AT4G05320.8 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.40e-40 | 135 |
| Msa0471880 | AT4G05320.8 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.40e-40 | 135 |
| Msa0471880 | AT4G05320.8 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 5.75e-40 | 135 |
| Msa0471880 | AT4G02890.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.40e-40 | 135 |
| Msa0471880 | AT4G02890.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.40e-40 | 135 |
| Msa0471880 | AT4G02890.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.40e-40 | 135 |
| Msa0471880 | AT4G02890.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 5.75e-40 | 135 |
| Msa0471880 | AT4G02890.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.40e-40 | 135 |
| Msa0471880 | AT4G02890.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.40e-40 | 135 |
| Msa0471880 | AT4G02890.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.40e-40 | 135 |
| Msa0471880 | AT4G02890.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 5.75e-40 | 135 |
| Msa0471880 | AT5G03240.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.3 | 100.000 | 65 | 0 | 0 | 1 | 65 | 240 | 304 | 7.37e-40 | 135 |
| Msa0471880 | AT5G03240.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.2 | 100.000 | 65 | 0 | 0 | 1 | 65 | 240 | 304 | 7.37e-40 | 135 |
| Msa0471880 | AT5G03240.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.69e-40 | 135 |
| Msa0471880 | AT5G03240.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 240 | 304 | 7.37e-40 | 135 |
| Msa0471880 | AT5G20620.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 4.69e-40 | 135 |
| Msa0471880 | AT5G20620.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 4.69e-40 | 135 |
| Msa0471880 | AT5G20620.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 4.69e-40 | 135 |
| Msa0471880 | AT5G20620.2 | 100.000 | 65 | 0 | 0 | 1 | 65 | 240 | 304 | 7.37e-40 | 135 |
| Msa0471880 | AT1G65350.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 7.43e-40 | 135 |
| Msa0471880 | AT1G65350.1 | 96.970 | 66 | 2 | 0 | 1 | 66 | 163 | 228 | 1.13e-38 | 132 |
| Msa0471880 | AT1G65350.1 | 96.970 | 66 | 1 | 1 | 1 | 66 | 88 | 152 | 7.85e-37 | 127 |
| Msa0471880 | AT1G65350.1 | 77.215 | 79 | 4 | 1 | 1 | 65 | 239 | 317 | 6.96e-31 | 112 |
| Msa0471880 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 2.63e-39 | 135 |
| Msa0471880 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.6 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 2.63e-39 | 135 |
| Msa0471880 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 2.02e-39 | 135 |
| Msa0471880 | AT4G05320.3 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 2.63e-39 | 135 |
| Msa0471880 | AT5G20620.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 2.12e-39 | 135 |
| Msa0471880 | AT5G20620.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 2.12e-39 | 135 |
| Msa0471880 | AT5G20620.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 2.12e-39 | 135 |
| Msa0471880 | AT5G20620.1 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 2.12e-39 | 135 |
| Msa0471880 | AT5G20620.1 | 100.000 | 65 | 0 | 0 | 1 | 65 | 316 | 380 | 3.27e-39 | 135 |
| Msa0471880 | AT5G37640.1 | 95.455 | 66 | 3 | 0 | 1 | 66 | 90 | 155 | 5.33e-39 | 133 |
| Msa0471880 | AT5G37640.1 | 93.939 | 66 | 4 | 0 | 1 | 66 | 166 | 231 | 1.17e-36 | 127 |
| Msa0471880 | AT5G37640.1 | 92.424 | 66 | 4 | 1 | 1 | 65 | 242 | 307 | 2.02e-33 | 118 |
| Msa0471880 | AT5G37640.1 | 78.788 | 66 | 14 | 0 | 1 | 66 | 14 | 79 | 1.76e-29 | 108 |
| Msa0471880 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.2 | 98.485 | 66 | 1 | 0 | 1 | 66 | 392 | 457 | 8.90e-39 | 135 |
| Msa0471880 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 12 | 77 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 88 | 153 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 164 | 229 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 240 | 305 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 316 | 381 | 6.79e-39 | 135 |
| Msa0471880 | AT4G05320.4 | 98.485 | 66 | 1 | 0 | 1 | 66 | 392 | 457 | 8.90e-39 | 135 |
| Msa0471880 | AT3G09790.2 | 92.424 | 66 | 5 | 0 | 1 | 66 | 90 | 155 | 3.22e-33 | 121 |
| Msa0471880 | AT3G09790.2 | 87.879 | 66 | 8 | 0 | 1 | 66 | 14 | 79 | 1.83e-32 | 119 |
| Msa0471880 | AT3G09790.2 | 77.778 | 63 | 14 | 0 | 1 | 63 | 563 | 625 | 2.21e-24 | 96.7 |
| Msa0471880 | AT3G09790.2 | 77.778 | 63 | 14 | 0 | 4 | 66 | 257 | 319 | 7.84e-24 | 95.1 |
| Msa0471880 | AT3G09790.2 | 70.769 | 65 | 19 | 0 | 2 | 66 | 405 | 469 | 1.53e-23 | 94.4 |
| Msa0471880 | AT3G09790.2 | 69.697 | 66 | 20 | 0 | 1 | 66 | 487 | 552 | 2.07e-22 | 91.3 |
| Msa0471880 | AT3G09790.2 | 71.212 | 66 | 17 | 1 | 1 | 64 | 171 | 236 | 2.45e-22 | 90.9 |
| Msa0471880 | AT3G09790.2 | 71.875 | 64 | 16 | 1 | 2 | 63 | 331 | 394 | 1.34e-21 | 89.0 |
| Msa0471880 | AT3G09790.1 | 92.424 | 66 | 5 | 0 | 1 | 66 | 90 | 155 | 3.22e-33 | 121 |
| Msa0471880 | AT3G09790.1 | 87.879 | 66 | 8 | 0 | 1 | 66 | 14 | 79 | 1.83e-32 | 119 |
| Msa0471880 | AT3G09790.1 | 77.778 | 63 | 14 | 0 | 1 | 63 | 563 | 625 | 2.21e-24 | 96.7 |
| Msa0471880 | AT3G09790.1 | 77.778 | 63 | 14 | 0 | 4 | 66 | 257 | 319 | 7.84e-24 | 95.1 |
| Msa0471880 | AT3G09790.1 | 70.769 | 65 | 19 | 0 | 2 | 66 | 405 | 469 | 1.53e-23 | 94.4 |
| Msa0471880 | AT3G09790.1 | 69.697 | 66 | 20 | 0 | 1 | 66 | 487 | 552 | 2.07e-22 | 91.3 |
| Msa0471880 | AT3G09790.1 | 71.212 | 66 | 17 | 1 | 1 | 64 | 171 | 236 | 2.45e-22 | 90.9 |
| Msa0471880 | AT3G09790.1 | 71.875 | 64 | 16 | 1 | 2 | 63 | 331 | 394 | 1.34e-21 | 89.0 |
| Msa0471880 | AT1G53930.1 | 77.049 | 61 | 14 | 0 | 2 | 62 | 98 | 158 | 8.47e-27 | 97.4 |
| Msa0471880 | AT1G11980.1 | 53.125 | 64 | 30 | 0 | 2 | 65 | 13 | 76 | 1.18e-19 | 77.0 |
| Msa0471880 | AT1G53950.1 | 60.000 | 60 | 24 | 0 | 1 | 60 | 80 | 139 | 1.95e-18 | 75.9 |
Find 35 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCAGAAATTAACCTTTC+TGG | 0.099822 | 3_3:-74255427 | None:intergenic |
| TCCATCTTCCAACTGCTTTC+CGG | 0.264402 | 3_3:-74255381 | None:intergenic |
| CTTATCCTGGTTATACTTCC+TGG | 0.288777 | 3_3:-74255650 | None:intergenic |
| GTCTACTTGATCTTCTTCTT+TGG | 0.291217 | 3_3:-74257074 | None:intergenic |
| AAGATCAACCTCTGCTGGTC+CGG | 0.328982 | 3_3:-74255356 | None:intergenic |
| AATCATTGAGCCTTCTTTGA+TGG | 0.363914 | 3_3:+74255621 | Msa0471880:CDS |
| CAACGTCAAAGCTAAGATTC+AGG | 0.397707 | 3_3:+74255220 | Msa0471880:CDS |
| AGATCAACCTCTGCTGGTCC+GGG | 0.424083 | 3_3:-74255355 | None:intergenic |
| AATTCTGTTGGAAGTTGAAC+TGG | 0.449207 | 3_3:+74257176 | Msa0471880:three_prime_UTR |
| CTTCTTTGATGGCGTTGGCC+AGG | 0.452976 | 3_3:+74255632 | Msa0471880:CDS |
| CGGCGAAGATCAACCTCTGC+TGG | 0.466798 | 3_3:-74255361 | None:intergenic |
| CTAAGAAGCTAATTATCAAA+AGG | 0.480970 | 3_3:-74257144 | None:intergenic |
| TGAGCCTTCTTTGATGGCGT+TGG | 0.490761 | 3_3:+74255627 | Msa0471880:CDS |
| CTGGCCAACGCCATCAAAGA+AGG | 0.492085 | 3_3:-74255631 | None:intergenic |
| TGCGGCAGATAGTCTTATCC+TGG | 0.502333 | 3_3:-74255663 | None:intergenic |
| GCCGGAAAGCAGTTGGAAGA+TGG | 0.509801 | 3_3:+74255380 | Msa0471880:CDS |
| TTCCTGCAGTTGACAGCACG+AGG | 0.524526 | 3_3:-74256927 | None:intergenic |
| TAGTATTGTATGAATTCTGT+TGG | 0.524734 | 3_3:+74257164 | Msa0471880:three_prime_UTR |
| GCTAAGATTCAGGATAAAGA+AGG | 0.540669 | 3_3:+74255230 | Msa0471880:CDS |
| CAGCAGAGGTTGATCTTCGC+CGG | 0.541092 | 3_3:+74255362 | Msa0471880:CDS |
| GAAGTGTGGACACAGCAATC+AGG | 0.542669 | 3_3:+74256953 | Msa0471880:CDS |
| ACCCTCGTGCTGTCAACTGC+AGG | 0.545009 | 3_3:+74256925 | Msa0471880:CDS |
| GATCTTCGCCGGAAAGCAGT+TGG | 0.546373 | 3_3:+74255373 | Msa0471880:CDS |
| CTGGATGTTGTAGTCAGCAA+GGG | 0.569635 | 3_3:-74255408 | None:intergenic |
| TGTCGCTTGACTCCACCTCA+AGG | 0.574617 | 3_3:-74255190 | None:intergenic |
| ATCAACCTCTGCTGGTCCGG+GGG | 0.575505 | 3_3:-74255353 | None:intergenic |
| TCTGGATGTTGTAGTCAGCA+AGG | 0.585018 | 3_3:-74255409 | None:intergenic |
| GTTGGCCAGGAAGTATAACC+AGG | 0.589917 | 3_3:+74255645 | Msa0471880:CDS |
| GATCAACCTCTGCTGGTCCG+GGG | 0.600001 | 3_3:-74255354 | None:intergenic |
| CAAGACTATCACCCTTGAGG+TGG | 0.603784 | 3_3:+74255178 | None:intergenic |
| CAATTGTTTAGGAATTCCCC+CGG | 0.609118 | 3_3:+74255337 | Msa0471880:intron |
| GTCGCTTGACTCCACCTCAA+GGG | 0.609137 | 3_3:-74255189 | None:intergenic |
| GCTGACTACAACATCCAGAA+AGG | 0.625044 | 3_3:+74255413 | Msa0471880:CDS |
| CGGCAAGACTATCACCCTTG+AGG | 0.665715 | 3_3:+74255175 | None:intergenic |
| TCCTGCAGTTGACAGCACGA+GGG | 0.675676 | 3_3:-74256926 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAGAATTTACTTTATT+TGG | - | chr3_3:74256047-74256066 | None:intergenic | 10.0% |
| !! | ATAAAGTAAATTCTATTTAT+AGG | + | chr3_3:74256048-74256067 | Msa0471880:intron | 10.0% |
| !! | TAAAGTAAATTCTATTTATA+GGG | + | chr3_3:74256049-74256068 | Msa0471880:intron | 10.0% |
| !!! | TTATTATTATTTAGTCTTAA+TGG | + | chr3_3:74257024-74257043 | Msa0471880:intron | 10.0% |
| !! | TAAATAGAATTTACTTTATT+TGG | - | chr3_3:74256047-74256066 | None:intergenic | 10.0% |
| !! | ATAAAGTAAATTCTATTTAT+AGG | + | chr3_3:74256048-74256067 | Msa0471880:intron | 10.0% |
| !! | TAAAGTAAATTCTATTTATA+GGG | + | chr3_3:74256049-74256068 | Msa0471880:intron | 10.0% |
| !!! | TTATTATTATTTAGTCTTAA+TGG | + | chr3_3:74257024-74257043 | Msa0471880:intron | 10.0% |
| !! | AAAGTAAATTCTATTTATAG+GGG | + | chr3_3:74256050-74256069 | Msa0471880:intron | 15.0% |
| !!! | AGTAAAATAATCTCTTTTTA+TGG | - | chr3_3:74256535-74256554 | None:intergenic | 15.0% |
| !!! | ATAAAAAGAGATTATTTTAC+TGG | + | chr3_3:74256534-74256553 | Msa0471880:intron | 15.0% |
| !!! | TTGTTGCTTTTTATTTTTTT+TGG | + | chr3_3:74257276-74257295 | Msa0471880:three_prime_UTR | 15.0% |
| !! | AAAGTAAATTCTATTTATAG+GGG | + | chr3_3:74256050-74256069 | Msa0471880:intron | 15.0% |
| !!! | AGTAAAATAATCTCTTTTTA+TGG | - | chr3_3:74256535-74256554 | None:intergenic | 15.0% |
| !!! | ATAAAAAGAGATTATTTTAC+TGG | + | chr3_3:74256534-74256553 | Msa0471880:intron | 15.0% |
| !!! | TTGTTGCTTTTTATTTTTTT+TGG | + | chr3_3:74257276-74257295 | Msa0471880:three_prime_UTR | 15.0% |
| !! | AAAGGAAAAAGAGAAAAAAA+TGG | - | chr3_3:74255281-74255300 | None:intergenic | 20.0% |
| !!! | TTTGTTTCTTTCAATTGTTT+AGG | + | chr3_3:74255326-74255345 | Msa0471880:intron | 20.0% |
| !! | AATCATCTGAATGTTTAAAA+AGG | + | chr3_3:74255957-74255976 | Msa0471880:intron | 20.0% |
| !!! | TTAAAAAGGTTACTTTTCTT+TGG | + | chr3_3:74255971-74255990 | Msa0471880:intron | 20.0% |
| !! | AAGTAAATTCTATTTATAGG+GGG | + | chr3_3:74256051-74256070 | Msa0471880:intron | 20.0% |
| !! | ATCCCATATATTAACTATTT+GGG | - | chr3_3:74256092-74256111 | None:intergenic | 20.0% |
| !! | TATCCCATATATTAACTATT+TGG | - | chr3_3:74256093-74256112 | None:intergenic | 20.0% |
| !! | AAATAGTTAATATATGGGAT+AGG | + | chr3_3:74256092-74256111 | Msa0471880:intron | 20.0% |
| !!! | TATAAAAGGTATTGTTATCA+CGG | - | chr3_3:74256194-74256213 | None:intergenic | 20.0% |
| !!! | CCAAGGTATTTAAATATAAA+AGG | - | chr3_3:74256208-74256227 | None:intergenic | 20.0% |
| !!! | CCTTTTATATTTAAATACCT+TGG | + | chr3_3:74256205-74256224 | Msa0471880:intron | 20.0% |
| !! | ACTTCTGATTACATTAAATT+AGG | + | chr3_3:74256380-74256399 | Msa0471880:intron | 20.0% |
| !! | AAAATAATAGTAATTGCCTA+GGG | + | chr3_3:74256702-74256721 | Msa0471880:intron | 20.0% |
| !! | CAGAATAATACAATATAACT+AGG | - | chr3_3:74256787-74256806 | None:intergenic | 20.0% |
| !! | TTATAATTGCCATCTATTAT+TGG | + | chr3_3:74256822-74256841 | Msa0471880:intron | 20.0% |
| !!! | TTTTGTTGATGATTTTGTTT+TGG | + | chr3_3:74257202-74257221 | Msa0471880:three_prime_UTR | 20.0% |
| !!! | CAATAATTTTGTTGCTTTTT+TGG | + | chr3_3:74257301-74257320 | Msa0471880:three_prime_UTR | 20.0% |
| !! | AAAGGAAAAAGAGAAAAAAA+TGG | - | chr3_3:74255281-74255300 | None:intergenic | 20.0% |
| !!! | TTTGTTTCTTTCAATTGTTT+AGG | + | chr3_3:74255326-74255345 | Msa0471880:intron | 20.0% |
| !! | AATCATCTGAATGTTTAAAA+AGG | + | chr3_3:74255957-74255976 | Msa0471880:intron | 20.0% |
| !!! | TTAAAAAGGTTACTTTTCTT+TGG | + | chr3_3:74255971-74255990 | Msa0471880:intron | 20.0% |
| !! | AAGTAAATTCTATTTATAGG+GGG | + | chr3_3:74256051-74256070 | Msa0471880:intron | 20.0% |
| !! | ATCCCATATATTAACTATTT+GGG | - | chr3_3:74256092-74256111 | None:intergenic | 20.0% |
| !! | TATCCCATATATTAACTATT+TGG | - | chr3_3:74256093-74256112 | None:intergenic | 20.0% |
| !! | AAATAGTTAATATATGGGAT+AGG | + | chr3_3:74256092-74256111 | Msa0471880:intron | 20.0% |
| !!! | TATAAAAGGTATTGTTATCA+CGG | - | chr3_3:74256194-74256213 | None:intergenic | 20.0% |
| !!! | CCAAGGTATTTAAATATAAA+AGG | - | chr3_3:74256208-74256227 | None:intergenic | 20.0% |
| !!! | CCTTTTATATTTAAATACCT+TGG | + | chr3_3:74256205-74256224 | Msa0471880:intron | 20.0% |
| !! | ACTTCTGATTACATTAAATT+AGG | + | chr3_3:74256380-74256399 | Msa0471880:intron | 20.0% |
| !! | AAAATAATAGTAATTGCCTA+GGG | + | chr3_3:74256702-74256721 | Msa0471880:intron | 20.0% |
| !! | CAGAATAATACAATATAACT+AGG | - | chr3_3:74256787-74256806 | None:intergenic | 20.0% |
| !! | TTATAATTGCCATCTATTAT+TGG | + | chr3_3:74256822-74256841 | Msa0471880:intron | 20.0% |
| !!! | TTTTGTTGATGATTTTGTTT+TGG | + | chr3_3:74257202-74257221 | Msa0471880:three_prime_UTR | 20.0% |
| !!! | CAATAATTTTGTTGCTTTTT+TGG | + | chr3_3:74257301-74257320 | Msa0471880:three_prime_UTR | 20.0% |
| ! | AAAAGAGAAAAAAATGGATC+TGG | - | chr3_3:74255275-74255294 | None:intergenic | 25.0% |
| ! | ATCAAACAAAAACGAATCAA+AGG | - | chr3_3:74255299-74255318 | None:intergenic | 25.0% |
| ! | AATTCAGAAATTAACCTTTC+TGG | - | chr3_3:74255430-74255449 | None:intergenic | 25.0% |
| ! | AACGTAACTAATAACATTCA+GGG | - | chr3_3:74255513-74255532 | None:intergenic | 25.0% |
| ! | AACACTTTAGACTTTAGTTA+AGG | + | chr3_3:74255849-74255868 | Msa0471880:intron | 25.0% |
| ! | AGACCCAAATAGTTAATATA+TGG | + | chr3_3:74256086-74256105 | Msa0471880:intron | 25.0% |
| ! | GACCCAAATAGTTAATATAT+GGG | + | chr3_3:74256087-74256106 | Msa0471880:intron | 25.0% |
| ! | CAAAATAATAGTAATTGCCT+AGG | + | chr3_3:74256701-74256720 | Msa0471880:intron | 25.0% |
| ! | AAATAATAGTAATTGCCTAG+GGG | + | chr3_3:74256703-74256722 | Msa0471880:intron | 25.0% |
| ! | ATAGTATCACATAAGATGTA+GGG | - | chr3_3:74256757-74256776 | None:intergenic | 25.0% |
| ! | TATAGTATCACATAAGATGT+AGG | - | chr3_3:74256758-74256777 | None:intergenic | 25.0% |
| ! | AAGATTTCATTCAATATGAC+AGG | - | chr3_3:74257000-74257019 | None:intergenic | 25.0% |
| !!! | TATTTTTTGTATTGCAGTTG+AGG | + | chr3_3:74257051-74257070 | Msa0471880:intron | 25.0% |
| ! | CTAAGAAGCTAATTATCAAA+AGG | - | chr3_3:74257147-74257166 | None:intergenic | 25.0% |
| ! | TAGTATTGTATGAATTCTGT+TGG | + | chr3_3:74257164-74257183 | Msa0471880:three_prime_UTR | 25.0% |
| ! | AAAAGAGAAAAAAATGGATC+TGG | - | chr3_3:74255275-74255294 | None:intergenic | 25.0% |
| ! | ATCAAACAAAAACGAATCAA+AGG | - | chr3_3:74255299-74255318 | None:intergenic | 25.0% |
| ! | AATTCAGAAATTAACCTTTC+TGG | - | chr3_3:74255430-74255449 | None:intergenic | 25.0% |
| ! | AACGTAACTAATAACATTCA+GGG | - | chr3_3:74255513-74255532 | None:intergenic | 25.0% |
| ! | AACACTTTAGACTTTAGTTA+AGG | + | chr3_3:74255849-74255868 | Msa0471880:intron | 25.0% |
| ! | AGACCCAAATAGTTAATATA+TGG | + | chr3_3:74256086-74256105 | Msa0471880:intron | 25.0% |
| ! | GACCCAAATAGTTAATATAT+GGG | + | chr3_3:74256087-74256106 | Msa0471880:intron | 25.0% |
| ! | CAAAATAATAGTAATTGCCT+AGG | + | chr3_3:74256701-74256720 | Msa0471880:intron | 25.0% |
| ! | AAATAATAGTAATTGCCTAG+GGG | + | chr3_3:74256703-74256722 | Msa0471880:intron | 25.0% |
| ! | ATAGTATCACATAAGATGTA+GGG | - | chr3_3:74256757-74256776 | None:intergenic | 25.0% |
| ! | TATAGTATCACATAAGATGT+AGG | - | chr3_3:74256758-74256777 | None:intergenic | 25.0% |
| ! | AAGATTTCATTCAATATGAC+AGG | - | chr3_3:74257000-74257019 | None:intergenic | 25.0% |
| !!! | TATTTTTTGTATTGCAGTTG+AGG | + | chr3_3:74257051-74257070 | Msa0471880:intron | 25.0% |
| ! | CTAAGAAGCTAATTATCAAA+AGG | - | chr3_3:74257147-74257166 | None:intergenic | 25.0% |
| ! | TAGTATTGTATGAATTCTGT+TGG | + | chr3_3:74257164-74257183 | Msa0471880:three_prime_UTR | 25.0% |
| CAACGTAACTAATAACATTC+AGG | - | chr3_3:74255514-74255533 | None:intergenic | 30.0% | |
| ! | TTGTGTTATTGGTATTGGAT+TGG | + | chr3_3:74255709-74255728 | Msa0471880:intron | 30.0% |
| TTAGACTTTAGTTAAGGTTC+AGG | + | chr3_3:74255855-74255874 | Msa0471880:intron | 30.0% | |
| !!! | TCAGGTTGTACATTTTTTTG+AGG | + | chr3_3:74255873-74255892 | Msa0471880:intron | 30.0% |
| ! | AATGATGGTTTTCTTCAGTT+TGG | + | chr3_3:74256135-74256154 | Msa0471880:intron | 30.0% |
| CTAGAATATTTCCGAAACAA+CGG | + | chr3_3:74256268-74256287 | Msa0471880:intron | 30.0% | |
| ! | GTCGACAACAATAAGATTTT+GGG | - | chr3_3:74256413-74256432 | None:intergenic | 30.0% |
| GATTCATACACTATGAAGTA+TGG | - | chr3_3:74256470-74256489 | None:intergenic | 30.0% | |
| ! | ATTAATGTTTGAAACCTGTC+TGG | + | chr3_3:74256564-74256583 | Msa0471880:intron | 30.0% |
| !!! | ACACATGATTTTGAAACCAA+AGG | + | chr3_3:74256665-74256684 | Msa0471880:intron | 30.0% |
| TTGCAAATGAATACTACCTT+TGG | - | chr3_3:74256684-74256703 | None:intergenic | 30.0% | |
| AATAATAGTAATTGCCTAGG+GGG | + | chr3_3:74256704-74256723 | Msa0471880:intron | 30.0% | |
| GATGGCAATTATAATTCAAG+TGG | - | chr3_3:74256816-74256835 | None:intergenic | 30.0% | |
| ACAATTATAAGTAAGCACAC+TGG | - | chr3_3:74256879-74256898 | None:intergenic | 30.0% | |
| !!! | GACTTTTTTGTTGTCATTAC+TGG | + | chr3_3:74257115-74257134 | Msa0471880:three_prime_UTR | 30.0% |
| !!! | CTTTTTTGGTGATATTCTGT+GGG | + | chr3_3:74257315-74257334 | Msa0471880:three_prime_UTR | 30.0% |
| CAACGTAACTAATAACATTC+AGG | - | chr3_3:74255514-74255533 | None:intergenic | 30.0% | |
| ! | TTGTGTTATTGGTATTGGAT+TGG | + | chr3_3:74255709-74255728 | Msa0471880:intron | 30.0% |
| TTAGACTTTAGTTAAGGTTC+AGG | + | chr3_3:74255855-74255874 | Msa0471880:intron | 30.0% | |
| !!! | TCAGGTTGTACATTTTTTTG+AGG | + | chr3_3:74255873-74255892 | Msa0471880:intron | 30.0% |
| ! | AATGATGGTTTTCTTCAGTT+TGG | + | chr3_3:74256135-74256154 | Msa0471880:intron | 30.0% |
| CTAGAATATTTCCGAAACAA+CGG | + | chr3_3:74256268-74256287 | Msa0471880:intron | 30.0% | |
| ! | GTCGACAACAATAAGATTTT+GGG | - | chr3_3:74256413-74256432 | None:intergenic | 30.0% |
| GATTCATACACTATGAAGTA+TGG | - | chr3_3:74256470-74256489 | None:intergenic | 30.0% | |
| ! | ATTAATGTTTGAAACCTGTC+TGG | + | chr3_3:74256564-74256583 | Msa0471880:intron | 30.0% |
| !!! | ACACATGATTTTGAAACCAA+AGG | + | chr3_3:74256665-74256684 | Msa0471880:intron | 30.0% |
| TTGCAAATGAATACTACCTT+TGG | - | chr3_3:74256684-74256703 | None:intergenic | 30.0% | |
| AATAATAGTAATTGCCTAGG+GGG | + | chr3_3:74256704-74256723 | Msa0471880:intron | 30.0% | |
| GATGGCAATTATAATTCAAG+TGG | - | chr3_3:74256816-74256835 | None:intergenic | 30.0% | |
| ACAATTATAAGTAAGCACAC+TGG | - | chr3_3:74256879-74256898 | None:intergenic | 30.0% | |
| !!! | GACTTTTTTGTTGTCATTAC+TGG | + | chr3_3:74257115-74257134 | Msa0471880:three_prime_UTR | 30.0% |
| !!! | CTTTTTTGGTGATATTCTGT+GGG | + | chr3_3:74257315-74257334 | Msa0471880:three_prime_UTR | 30.0% |
| GCTAAGATTCAGGATAAAGA+AGG | + | chr3_3:74255230-74255249 | Msa0471880:CDS | 35.0% | |
| TGGATCTGGTTATTTGAGTA+AGG | - | chr3_3:74255261-74255280 | None:intergenic | 35.0% | |
| GCTTGTTTAGATTGAATGCT+TGG | + | chr3_3:74255479-74255498 | Msa0471880:intron | 35.0% | |
| TGAATGACTCTTGTCTGAAT+TGG | + | chr3_3:74255532-74255551 | Msa0471880:intron | 35.0% | |
| GAATGACTCTTGTCTGAATT+GGG | + | chr3_3:74255533-74255552 | Msa0471880:intron | 35.0% | |
| AATGACTCTTGTCTGAATTG+GGG | + | chr3_3:74255534-74255553 | Msa0471880:intron | 35.0% | |
| !!! | CAACTTTGCATCTTGTTTTG+AGG | + | chr3_3:74255587-74255606 | Msa0471880:CDS | 35.0% |
| AATCATTGAGCCTTCTTTGA+TGG | + | chr3_3:74255621-74255640 | Msa0471880:CDS | 35.0% | |
| AGATTGTGCAAACTTACTTG+CGG | - | chr3_3:74255684-74255703 | None:intergenic | 35.0% | |
| GAGCACTAAAATCATGTCAA+AGG | - | chr3_3:74255917-74255936 | None:intergenic | 35.0% | |
| !! | ACTATTTGGGTCTTGTTAAC+CGG | - | chr3_3:74256079-74256098 | None:intergenic | 35.0% |
| ! | GAAAACCATCATTTTCGATG+AGG | - | chr3_3:74256128-74256147 | None:intergenic | 35.0% |
| GCAAAATATCAACACAACCA+AGG | - | chr3_3:74256225-74256244 | None:intergenic | 35.0% | |
| !! | TGGTTGTGTTGATATTTTGC+TGG | + | chr3_3:74256225-74256244 | Msa0471880:intron | 35.0% |
| !! | GGTTGTGTTGATATTTTGCT+GGG | + | chr3_3:74256226-74256245 | Msa0471880:intron | 35.0% |
| AGTTCATACATCCGTTGTTT+CGG | - | chr3_3:74256282-74256301 | None:intergenic | 35.0% | |
| ! | CGTCGACAACAATAAGATTT+TGG | - | chr3_3:74256414-74256433 | None:intergenic | 35.0% |
| CACATCTTCGTTCAAACAAT+TGG | + | chr3_3:74256489-74256508 | Msa0471880:intron | 35.0% | |
| TTGCCATCTATTATTGGAAG+CGG | + | chr3_3:74256828-74256847 | Msa0471880:intron | 35.0% | |
| TACTTATAATTGTGCTGTGC+AGG | + | chr3_3:74256886-74256905 | Msa0471880:intron | 35.0% | |
| GTCTACTTGATCTTCTTCTT+TGG | - | chr3_3:74257077-74257096 | None:intergenic | 35.0% | |
| !!! | AAGTAGACTGTTTTGATTGC+TGG | + | chr3_3:74257089-74257108 | Msa0471880:exon | 35.0% |
| AATTCTGTTGGAAGTTGAAC+TGG | + | chr3_3:74257176-74257195 | Msa0471880:three_prime_UTR | 35.0% | |
| !!! | GCTTTTTTGGTGATATTCTG+TGG | + | chr3_3:74257314-74257333 | Msa0471880:three_prime_UTR | 35.0% |
| GCTAAGATTCAGGATAAAGA+AGG | + | chr3_3:74255230-74255249 | Msa0471880:CDS | 35.0% | |
| TGGATCTGGTTATTTGAGTA+AGG | - | chr3_3:74255261-74255280 | None:intergenic | 35.0% | |
| GCTTGTTTAGATTGAATGCT+TGG | + | chr3_3:74255479-74255498 | Msa0471880:intron | 35.0% | |
| TGAATGACTCTTGTCTGAAT+TGG | + | chr3_3:74255532-74255551 | Msa0471880:intron | 35.0% | |
| GAATGACTCTTGTCTGAATT+GGG | + | chr3_3:74255533-74255552 | Msa0471880:intron | 35.0% | |
| AATGACTCTTGTCTGAATTG+GGG | + | chr3_3:74255534-74255553 | Msa0471880:intron | 35.0% | |
| !!! | CAACTTTGCATCTTGTTTTG+AGG | + | chr3_3:74255587-74255606 | Msa0471880:CDS | 35.0% |
| AATCATTGAGCCTTCTTTGA+TGG | + | chr3_3:74255621-74255640 | Msa0471880:CDS | 35.0% | |
| AGATTGTGCAAACTTACTTG+CGG | - | chr3_3:74255684-74255703 | None:intergenic | 35.0% | |
| GAGCACTAAAATCATGTCAA+AGG | - | chr3_3:74255917-74255936 | None:intergenic | 35.0% | |
| !! | ACTATTTGGGTCTTGTTAAC+CGG | - | chr3_3:74256079-74256098 | None:intergenic | 35.0% |
| ! | GAAAACCATCATTTTCGATG+AGG | - | chr3_3:74256128-74256147 | None:intergenic | 35.0% |
| GCAAAATATCAACACAACCA+AGG | - | chr3_3:74256225-74256244 | None:intergenic | 35.0% | |
| !! | TGGTTGTGTTGATATTTTGC+TGG | + | chr3_3:74256225-74256244 | Msa0471880:intron | 35.0% |
| !! | GGTTGTGTTGATATTTTGCT+GGG | + | chr3_3:74256226-74256245 | Msa0471880:intron | 35.0% |
| AGTTCATACATCCGTTGTTT+CGG | - | chr3_3:74256282-74256301 | None:intergenic | 35.0% | |
| ! | CGTCGACAACAATAAGATTT+TGG | - | chr3_3:74256414-74256433 | None:intergenic | 35.0% |
| CACATCTTCGTTCAAACAAT+TGG | + | chr3_3:74256489-74256508 | Msa0471880:intron | 35.0% | |
| TTGCCATCTATTATTGGAAG+CGG | + | chr3_3:74256828-74256847 | Msa0471880:intron | 35.0% | |
| TACTTATAATTGTGCTGTGC+AGG | + | chr3_3:74256886-74256905 | Msa0471880:intron | 35.0% | |
| GTCTACTTGATCTTCTTCTT+TGG | - | chr3_3:74257077-74257096 | None:intergenic | 35.0% | |
| !!! | AAGTAGACTGTTTTGATTGC+TGG | + | chr3_3:74257089-74257108 | Msa0471880:exon | 35.0% |
| AATTCTGTTGGAAGTTGAAC+TGG | + | chr3_3:74257176-74257195 | Msa0471880:three_prime_UTR | 35.0% | |
| !!! | GCTTTTTTGGTGATATTCTG+TGG | + | chr3_3:74257314-74257333 | Msa0471880:three_prime_UTR | 35.0% |
| CAACGTCAAAGCTAAGATTC+AGG | + | chr3_3:74255220-74255239 | Msa0471880:CDS | 40.0% | |
| CAATTGTTTAGGAATTCCCC+CGG | + | chr3_3:74255337-74255356 | Msa0471880:intron | 40.0% | |
| CTTATCCTGGTTATACTTCC+TGG | - | chr3_3:74255653-74255672 | None:intergenic | 40.0% | |
| GCAAGTAAGTTTGCACAATC+TGG | + | chr3_3:74255683-74255702 | Msa0471880:intron | 40.0% | |
| !! | CAATCTGGCTCTTGTGTTAT+TGG | + | chr3_3:74255698-74255717 | Msa0471880:intron | 40.0% |
| ! | GGCTCTTGTGTTATTGGTAT+TGG | + | chr3_3:74255704-74255723 | Msa0471880:intron | 40.0% |
| ! | TTTTCCTACAGTTGTCAACG+AGG | - | chr3_3:74255939-74255958 | None:intergenic | 40.0% |
| ! | ATTCTATTTATAGGGGGCAC+CGG | + | chr3_3:74256057-74256076 | Msa0471880:intron | 40.0% |
| ! | TGGTTTTCTTCAGTTTGGCA+TGG | + | chr3_3:74256140-74256159 | Msa0471880:intron | 40.0% |
| TTGGCATGGCATACACTTAT+AGG | + | chr3_3:74256154-74256173 | Msa0471880:intron | 40.0% | |
| GCACATACACTTCTGATTGA+AGG | + | chr3_3:74256307-74256326 | Msa0471880:intron | 40.0% | |
| !! | TGGAACAGTTCTAAGACAGT+TGG | - | chr3_3:74256515-74256534 | None:intergenic | 40.0% |
| CACAAAATCTCAATCCAGAC+AGG | - | chr3_3:74256581-74256600 | None:intergenic | 40.0% | |
| CACACGTAAGCAGATATCTA+AGG | - | chr3_3:74256635-74256654 | None:intergenic | 40.0% | |
| TGCCATCTATTATTGGAAGC+GGG | + | chr3_3:74256829-74256848 | Msa0471880:intron | 40.0% | |
| AACTGCAGGAAAAAGAAGTG+TGG | + | chr3_3:74256939-74256958 | Msa0471880:CDS | 40.0% | |
| !!! | AGACTGTTTTGATTGCTGGA+AGG | + | chr3_3:74257093-74257112 | Msa0471880:exon | 40.0% |
| CAACGTCAAAGCTAAGATTC+AGG | + | chr3_3:74255220-74255239 | Msa0471880:CDS | 40.0% | |
| CAATTGTTTAGGAATTCCCC+CGG | + | chr3_3:74255337-74255356 | Msa0471880:intron | 40.0% | |
| CTTATCCTGGTTATACTTCC+TGG | - | chr3_3:74255653-74255672 | None:intergenic | 40.0% | |
| GCAAGTAAGTTTGCACAATC+TGG | + | chr3_3:74255683-74255702 | Msa0471880:intron | 40.0% | |
| !! | CAATCTGGCTCTTGTGTTAT+TGG | + | chr3_3:74255698-74255717 | Msa0471880:intron | 40.0% |
| ! | GGCTCTTGTGTTATTGGTAT+TGG | + | chr3_3:74255704-74255723 | Msa0471880:intron | 40.0% |
| ! | TTTTCCTACAGTTGTCAACG+AGG | - | chr3_3:74255939-74255958 | None:intergenic | 40.0% |
| ! | ATTCTATTTATAGGGGGCAC+CGG | + | chr3_3:74256057-74256076 | Msa0471880:intron | 40.0% |
| ! | TGGTTTTCTTCAGTTTGGCA+TGG | + | chr3_3:74256140-74256159 | Msa0471880:intron | 40.0% |
| TTGGCATGGCATACACTTAT+AGG | + | chr3_3:74256154-74256173 | Msa0471880:intron | 40.0% | |
| GCACATACACTTCTGATTGA+AGG | + | chr3_3:74256307-74256326 | Msa0471880:intron | 40.0% | |
| !! | TGGAACAGTTCTAAGACAGT+TGG | - | chr3_3:74256515-74256534 | None:intergenic | 40.0% |
| CACAAAATCTCAATCCAGAC+AGG | - | chr3_3:74256581-74256600 | None:intergenic | 40.0% | |
| CACACGTAAGCAGATATCTA+AGG | - | chr3_3:74256635-74256654 | None:intergenic | 40.0% | |
| TGCCATCTATTATTGGAAGC+GGG | + | chr3_3:74256829-74256848 | Msa0471880:intron | 40.0% | |
| AACTGCAGGAAAAAGAAGTG+TGG | + | chr3_3:74256939-74256958 | Msa0471880:CDS | 40.0% | |
| !!! | AGACTGTTTTGATTGCTGGA+AGG | + | chr3_3:74257093-74257112 | Msa0471880:exon | 40.0% |
| TCCATCTTCCAACTGCTTTC+CGG | - | chr3_3:74255384-74255403 | None:intergenic | 45.0% | |
| CTGGATGTTGTAGTCAGCAA+GGG | - | chr3_3:74255411-74255430 | None:intergenic | 45.0% | |
| TCTGGATGTTGTAGTCAGCA+AGG | - | chr3_3:74255412-74255431 | None:intergenic | 45.0% | |
| GCTGACTACAACATCCAGAA+AGG | + | chr3_3:74255413-74255432 | Msa0471880:CDS | 45.0% | |
| !!! | CATCTTGTTTTGAGGCTTCG+TGG | + | chr3_3:74255595-74255614 | Msa0471880:CDS | 45.0% |
| ! | TTTGAGGCACATACCCTTGT+TGG | + | chr3_3:74255889-74255908 | Msa0471880:intron | 45.0% |
| !! | CATGTCAAAGGCACCAACAA+GGG | - | chr3_3:74255905-74255924 | None:intergenic | 45.0% |
| !! | TCATGTCAAAGGCACCAACA+AGG | - | chr3_3:74255906-74255925 | None:intergenic | 45.0% |
| CAATAAGTGCAAATTGCCCC+CGG | + | chr3_3:74256006-74256025 | Msa0471880:intron | 45.0% | |
| AATAAGTGCAAATTGCCCCC+GGG | + | chr3_3:74256007-74256026 | Msa0471880:intron | 45.0% | |
| CACAGCCTCATCGAAAATGA+TGG | + | chr3_3:74256120-74256139 | Msa0471880:intron | 45.0% | |
| GGTATTGTTATCACGGAACG+AGG | - | chr3_3:74256187-74256206 | None:intergenic | 45.0% | |
| ATTCGTGTCAATGTCGTGTC+TGG | + | chr3_3:74256435-74256454 | Msa0471880:intron | 45.0% | |
| GCCATCTATTATTGGAAGCG+GGG | + | chr3_3:74256830-74256849 | Msa0471880:intron | 45.0% | |
| TCCATCTTCCAACTGCTTTC+CGG | - | chr3_3:74255384-74255403 | None:intergenic | 45.0% | |
| CTGGATGTTGTAGTCAGCAA+GGG | - | chr3_3:74255411-74255430 | None:intergenic | 45.0% | |
| TCTGGATGTTGTAGTCAGCA+AGG | - | chr3_3:74255412-74255431 | None:intergenic | 45.0% | |
| GCTGACTACAACATCCAGAA+AGG | + | chr3_3:74255413-74255432 | Msa0471880:CDS | 45.0% | |
| !!! | CATCTTGTTTTGAGGCTTCG+TGG | + | chr3_3:74255595-74255614 | Msa0471880:CDS | 45.0% |
| ! | TTTGAGGCACATACCCTTGT+TGG | + | chr3_3:74255889-74255908 | Msa0471880:intron | 45.0% |
| !! | CATGTCAAAGGCACCAACAA+GGG | - | chr3_3:74255905-74255924 | None:intergenic | 45.0% |
| !! | TCATGTCAAAGGCACCAACA+AGG | - | chr3_3:74255906-74255925 | None:intergenic | 45.0% |
| CAATAAGTGCAAATTGCCCC+CGG | + | chr3_3:74256006-74256025 | Msa0471880:intron | 45.0% | |
| AATAAGTGCAAATTGCCCCC+GGG | + | chr3_3:74256007-74256026 | Msa0471880:intron | 45.0% | |
| CACAGCCTCATCGAAAATGA+TGG | + | chr3_3:74256120-74256139 | Msa0471880:intron | 45.0% | |
| GGTATTGTTATCACGGAACG+AGG | - | chr3_3:74256187-74256206 | None:intergenic | 45.0% | |
| ATTCGTGTCAATGTCGTGTC+TGG | + | chr3_3:74256435-74256454 | Msa0471880:intron | 45.0% | |
| GCCATCTATTATTGGAAGCG+GGG | + | chr3_3:74256830-74256849 | Msa0471880:intron | 45.0% | |
| AAGATCAACCTCTGCTGGTC+CGG | - | chr3_3:74255359-74255378 | None:intergenic | 50.0% | |
| !!! | CTTGTTTTGAGGCTTCGTGG+TGG | + | chr3_3:74255598-74255617 | Msa0471880:CDS | 50.0% |
| !! | TGAGCCTTCTTTGATGGCGT+TGG | + | chr3_3:74255627-74255646 | Msa0471880:CDS | 50.0% |
| ! | GTTGGCCAGGAAGTATAACC+AGG | + | chr3_3:74255645-74255664 | Msa0471880:CDS | 50.0% |
| !! | TGCGGCAGATAGTCTTATCC+TGG | - | chr3_3:74255666-74255685 | None:intergenic | 50.0% |
| TGCTCCTCGTTGACAACTGT+AGG | + | chr3_3:74255932-74255951 | Msa0471880:intron | 50.0% | |
| ATAAGTGCAAATTGCCCCCG+GGG | + | chr3_3:74256008-74256027 | Msa0471880:intron | 50.0% | |
| ! | TTGGTGCTTAACCAATGCCC+CGG | - | chr3_3:74256028-74256047 | None:intergenic | 50.0% |
| GAGTCTGACAGTACACGAGT+CGG | - | chr3_3:74256346-74256365 | None:intergenic | 50.0% | |
| GCCCCGCTTCCAATAATAGA+TGG | - | chr3_3:74256834-74256853 | None:intergenic | 50.0% | |
| GAAGTGTGGACACAGCAATC+AGG | + | chr3_3:74256953-74256972 | Msa0471880:CDS | 50.0% | |
| AAGATCAACCTCTGCTGGTC+CGG | - | chr3_3:74255359-74255378 | None:intergenic | 50.0% | |
| !!! | CTTGTTTTGAGGCTTCGTGG+TGG | + | chr3_3:74255598-74255617 | Msa0471880:CDS | 50.0% |
| !! | TGAGCCTTCTTTGATGGCGT+TGG | + | chr3_3:74255627-74255646 | Msa0471880:CDS | 50.0% |
| ! | GTTGGCCAGGAAGTATAACC+AGG | + | chr3_3:74255645-74255664 | Msa0471880:CDS | 50.0% |
| !! | TGCGGCAGATAGTCTTATCC+TGG | - | chr3_3:74255666-74255685 | None:intergenic | 50.0% |
| TGCTCCTCGTTGACAACTGT+AGG | + | chr3_3:74255932-74255951 | Msa0471880:intron | 50.0% | |
| ATAAGTGCAAATTGCCCCCG+GGG | + | chr3_3:74256008-74256027 | Msa0471880:intron | 50.0% | |
| ! | TTGGTGCTTAACCAATGCCC+CGG | - | chr3_3:74256028-74256047 | None:intergenic | 50.0% |
| GAGTCTGACAGTACACGAGT+CGG | - | chr3_3:74256346-74256365 | None:intergenic | 50.0% | |
| GCCCCGCTTCCAATAATAGA+TGG | - | chr3_3:74256834-74256853 | None:intergenic | 50.0% | |
| GAAGTGTGGACACAGCAATC+AGG | + | chr3_3:74256953-74256972 | Msa0471880:CDS | 50.0% | |
| GTCGCTTGACTCCACCTCAA+GGG | - | chr3_3:74255192-74255211 | None:intergenic | 55.0% | |
| ! | TGTCGCTTGACTCCACCTCA+AGG | - | chr3_3:74255193-74255212 | None:intergenic | 55.0% |
| AGATCAACCTCTGCTGGTCC+GGG | - | chr3_3:74255358-74255377 | None:intergenic | 55.0% | |
| ! | CAGCAGAGGTTGATCTTCGC+CGG | + | chr3_3:74255362-74255381 | Msa0471880:CDS | 55.0% |
| GATCTTCGCCGGAAAGCAGT+TGG | + | chr3_3:74255373-74255392 | Msa0471880:CDS | 55.0% | |
| GCCGGAAAGCAGTTGGAAGA+TGG | + | chr3_3:74255380-74255399 | Msa0471880:CDS | 55.0% | |
| CTGGCCAACGCCATCAAAGA+AGG | - | chr3_3:74255634-74255653 | None:intergenic | 55.0% | |
| !! | CTTCTTTGATGGCGTTGGCC+AGG | + | chr3_3:74255632-74255651 | Msa0471880:CDS | 55.0% |
| TGGTGCTTAACCAATGCCCC+GGG | - | chr3_3:74256027-74256046 | None:intergenic | 55.0% | |
| ACAGTACACGAGTCGGACAG+CGG | - | chr3_3:74256339-74256358 | None:intergenic | 55.0% | |
| TCCTCTAACAAGCACCCCCT+AGG | - | chr3_3:74256721-74256740 | None:intergenic | 55.0% | |
| TCCTGCAGTTGACAGCACGA+GGG | - | chr3_3:74256929-74256948 | None:intergenic | 55.0% | |
| TTCCTGCAGTTGACAGCACG+AGG | - | chr3_3:74256930-74256949 | None:intergenic | 55.0% | |
| GTCGCTTGACTCCACCTCAA+GGG | - | chr3_3:74255192-74255211 | None:intergenic | 55.0% | |
| ! | TGTCGCTTGACTCCACCTCA+AGG | - | chr3_3:74255193-74255212 | None:intergenic | 55.0% |
| AGATCAACCTCTGCTGGTCC+GGG | - | chr3_3:74255358-74255377 | None:intergenic | 55.0% | |
| ! | CAGCAGAGGTTGATCTTCGC+CGG | + | chr3_3:74255362-74255381 | Msa0471880:CDS | 55.0% |
| GATCTTCGCCGGAAAGCAGT+TGG | + | chr3_3:74255373-74255392 | Msa0471880:CDS | 55.0% | |
| GCCGGAAAGCAGTTGGAAGA+TGG | + | chr3_3:74255380-74255399 | Msa0471880:CDS | 55.0% | |
| CTGGCCAACGCCATCAAAGA+AGG | - | chr3_3:74255634-74255653 | None:intergenic | 55.0% | |
| !! | CTTCTTTGATGGCGTTGGCC+AGG | + | chr3_3:74255632-74255651 | Msa0471880:CDS | 55.0% |
| TGGTGCTTAACCAATGCCCC+GGG | - | chr3_3:74256027-74256046 | None:intergenic | 55.0% | |
| ACAGTACACGAGTCGGACAG+CGG | - | chr3_3:74256339-74256358 | None:intergenic | 55.0% | |
| TCCTCTAACAAGCACCCCCT+AGG | - | chr3_3:74256721-74256740 | None:intergenic | 55.0% | |
| TCCTGCAGTTGACAGCACGA+GGG | - | chr3_3:74256929-74256948 | None:intergenic | 55.0% | |
| TTCCTGCAGTTGACAGCACG+AGG | - | chr3_3:74256930-74256949 | None:intergenic | 55.0% | |
| ATCAACCTCTGCTGGTCCGG+GGG | - | chr3_3:74255356-74255375 | None:intergenic | 60.0% | |
| GATCAACCTCTGCTGGTCCG+GGG | - | chr3_3:74255357-74255376 | None:intergenic | 60.0% | |
| CGGCGAAGATCAACCTCTGC+TGG | - | chr3_3:74255364-74255383 | None:intergenic | 60.0% | |
| GTGCTTAACCAATGCCCCGG+GGG | - | chr3_3:74256025-74256044 | None:intergenic | 60.0% | |
| GGTGCTTAACCAATGCCCCG+GGG | - | chr3_3:74256026-74256045 | None:intergenic | 60.0% | |
| CAGTACACGAGTCGGACAGC+GGG | - | chr3_3:74256338-74256357 | None:intergenic | 60.0% | |
| !! | GCCTAGGGGGTGCTTGTTAG+AGG | + | chr3_3:74256717-74256736 | Msa0471880:intron | 60.0% |
| ACCCTCGTGCTGTCAACTGC+AGG | + | chr3_3:74256925-74256944 | Msa0471880:CDS | 60.0% | |
| ATCAACCTCTGCTGGTCCGG+GGG | - | chr3_3:74255356-74255375 | None:intergenic | 60.0% | |
| GATCAACCTCTGCTGGTCCG+GGG | - | chr3_3:74255357-74255376 | None:intergenic | 60.0% | |
| CGGCGAAGATCAACCTCTGC+TGG | - | chr3_3:74255364-74255383 | None:intergenic | 60.0% | |
| GTGCTTAACCAATGCCCCGG+GGG | - | chr3_3:74256025-74256044 | None:intergenic | 60.0% | |
| GGTGCTTAACCAATGCCCCG+GGG | - | chr3_3:74256026-74256045 | None:intergenic | 60.0% | |
| CAGTACACGAGTCGGACAGC+GGG | - | chr3_3:74256338-74256357 | None:intergenic | 60.0% | |
| !! | GCCTAGGGGGTGCTTGTTAG+AGG | + | chr3_3:74256717-74256736 | Msa0471880:intron | 60.0% |
| ACCCTCGTGCTGTCAACTGC+AGG | + | chr3_3:74256925-74256944 | Msa0471880:CDS | 60.0% | |
| GAATTCCCCCGGACCAGCAG+AGG | + | chr3_3:74255348-74255367 | Msa0471880:CDS | 65.0% | |
| GCAAATTGCCCCCGGGGCAT+TGG | + | chr3_3:74256014-74256033 | Msa0471880:intron | 65.0% | |
| GAATTCCCCCGGACCAGCAG+AGG | + | chr3_3:74255348-74255367 | Msa0471880:CDS | 65.0% | |
| GCAAATTGCCCCCGGGGCAT+TGG | + | chr3_3:74256014-74256033 | Msa0471880:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 74255182 | 74257385 | 74255182 | ID=Msa0471880;Name=Msa0471880 |
| chr3_3 | mRNA | 74255182 | 74257385 | 74255182 | ID=Msa0471880-mRNA-1;Parent=Msa0471880;Name=Msa0471880-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|1|1|1|0.8|5|291|117 |
| chr3_3 | exon | 74255182 | 74255251 | 74255182 | ID=Msa0471880-mRNA-1:exon:18931;Parent=Msa0471880-mRNA-1 |
| chr3_3 | exon | 74255348 | 74255434 | 74255348 | ID=Msa0471880-mRNA-1:exon:18932;Parent=Msa0471880-mRNA-1 |
| chr3_3 | exon | 74255584 | 74255686 | 74255584 | ID=Msa0471880-mRNA-1:exon:18933;Parent=Msa0471880-mRNA-1 |
| chr3_3 | exon | 74256908 | 74256974 | 74256908 | ID=Msa0471880-mRNA-1:exon:18934;Parent=Msa0471880-mRNA-1 |
| chr3_3 | exon | 74257068 | 74257385 | 74257068 | ID=Msa0471880-mRNA-1:exon:18935;Parent=Msa0471880-mRNA-1 |
| chr3_3 | CDS | 74255182 | 74255251 | 74255182 | ID=Msa0471880-mRNA-1:cds;Parent=Msa0471880-mRNA-1 |
| chr3_3 | CDS | 74255348 | 74255434 | 74255348 | ID=Msa0471880-mRNA-1:cds;Parent=Msa0471880-mRNA-1 |
| chr3_3 | CDS | 74255584 | 74255686 | 74255584 | ID=Msa0471880-mRNA-1:cds;Parent=Msa0471880-mRNA-1 |
| chr3_3 | CDS | 74256908 | 74256974 | 74256908 | ID=Msa0471880-mRNA-1:cds;Parent=Msa0471880-mRNA-1 |
| chr3_3 | CDS | 74257068 | 74257094 | 74257068 | ID=Msa0471880-mRNA-1:cds;Parent=Msa0471880-mRNA-1 |
| chr3_3 | three_prime_UTR | 74257095 | 74257385 | 74257095 | ID=Msa0471880-mRNA-1:three_prime_utr;Parent=Msa0471880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
