Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647970 | XP_013455937.2 | 89.610 | 231 | 13 | 1 | 19 | 238 | 21 | 251 | 2.38e-147 | 429 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647970 | sp|P32826|SCP49_ARATH | 57.831 | 249 | 84 | 7 | 7 | 238 | 8 | 252 | 2.94e-89 | 275 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647970 | A0A072ULM8 | 89.610 | 231 | 13 | 1 | 19 | 238 | 21 | 251 | 8.17e-147 | 428 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011010 | Msa0647970 | 0.801798 | 7.595458e-49 | -8.615850e-47 |
Msa0024650 | Msa0647970 | 0.809738 | 1.630867e-50 | -8.615850e-47 |
Msa0025570 | Msa0647970 | 0.822389 | 2.432040e-53 | -8.615850e-47 |
Msa0060410 | Msa0647970 | 0.804918 | 1.715438e-49 | -8.615850e-47 |
Msa0072180 | Msa0647970 | 0.809017 | 2.329026e-50 | -8.615850e-47 |
Msa0073110 | Msa0647970 | 0.826820 | 2.198742e-54 | -8.615850e-47 |
Msa0106540 | Msa0647970 | 0.814194 | 1.744257e-51 | -8.615850e-47 |
Msa0120450 | Msa0647970 | 0.819614 | 1.058560e-52 | -8.615850e-47 |
Msa0604190 | Msa0647970 | 0.842959 | 1.879798e-58 | -8.615850e-47 |
Msa0629160 | Msa0647970 | 0.801660 | 8.109587e-49 | -8.615850e-47 |
Msa0643230 | Msa0647970 | 0.809330 | 1.995913e-50 | -8.615850e-47 |
Msa0647970 | Msa0682110 | 0.889006 | 3.562413e-73 | -8.615850e-47 |
Msa0647970 | Msa0682160 | 0.902568 | 8.489812e-79 | -8.615850e-47 |
Msa0647970 | Msa0685020 | 0.803026 | 4.242200e-49 | -8.615850e-47 |
Msa0647970 | Msa0699170 | 0.805293 | 1.431856e-49 | -8.615850e-47 |
Msa0647970 | Msa0725580 | 0.801246 | 9.858398e-49 | -8.615850e-47 |
Msa0647970 | Msa0733560 | 0.812374 | 4.377561e-51 | -8.615850e-47 |
Msa0647970 | Msa0755880 | 0.803762 | 2.986505e-49 | -8.615850e-47 |
Msa0647970 | Msa0773960 | 0.814111 | 1.819831e-51 | -8.615850e-47 |
Msa0647970 | Msa0812720 | 0.815898 | 7.301421e-52 | -8.615850e-47 |
Msa0647970 | Msa0841520 | 0.810004 | 1.429541e-50 | -8.615850e-47 |
Msa0647970 | Msa0873880 | 0.813242 | 2.826822e-51 | -8.615850e-47 |
Msa0647970 | Msa0873940 | 0.808400 | 3.154914e-50 | -8.615850e-47 |
Msa0647970 | Msa0903020 | 0.801868 | 7.348274e-49 | -8.615850e-47 |
Msa0647970 | Msa0906680 | 0.809852 | 1.541493e-50 | -8.615850e-47 |
Msa0647970 | Msa0910170 | 0.813217 | 2.861737e-51 | -8.615850e-47 |
Msa0647970 | Msa0975950 | 0.807386 | 5.185788e-50 | -8.615850e-47 |
Msa0647970 | Msa1007900 | 0.804311 | 2.295767e-49 | -8.615850e-47 |
Msa0647970 | Msa1024480 | 0.800274 | 1.556073e-48 | -8.615850e-47 |
Msa0647970 | Msa1029780 | 0.809055 | 2.286493e-50 | -8.615850e-47 |
Msa0647970 | Msa1029820 | 0.801032 | 1.090430e-48 | -8.615850e-47 |
Msa0647970 | Msa1029860 | 0.821585 | 3.733692e-53 | -8.615850e-47 |
Msa0647970 | Msa1056890 | 0.805811 | 1.114831e-49 | -8.615850e-47 |
Msa0647970 | Msa1062290 | 0.811897 | 5.563353e-51 | -8.615850e-47 |
Msa0647970 | Msa1066150 | 0.803652 | 3.147424e-49 | -8.615850e-47 |
Msa0647970 | Msa1068730 | 0.831762 | 1.388681e-55 | -8.615850e-47 |
Msa0647970 | Msa1068940 | 0.805783 | 1.129691e-49 | -8.615850e-47 |
Msa0647970 | Msa1103450 | 0.800585 | 1.345442e-48 | -8.615850e-47 |
Msa0647970 | Msa1108560 | 0.810159 | 1.323891e-50 | -8.615850e-47 |
Msa0647970 | Msa1115980 | 0.802015 | 6.855795e-49 | -8.615850e-47 |
Msa0647970 | Msa1136630 | 0.800328 | 1.517767e-48 | -8.615850e-47 |
Msa0647970 | Msa1136690 | 0.801519 | 8.667957e-49 | -8.615850e-47 |
Msa0647970 | Msa1136760 | 0.804100 | 2.540119e-49 | -8.615850e-47 |
Msa0647970 | Msa1181090 | 0.801152 | 1.030269e-48 | -8.615850e-47 |
Msa0647970 | Msa1205770 | 0.808588 | 2.876336e-50 | -8.615850e-47 |
Msa0647970 | Msa1223960 | 0.814281 | 1.668427e-51 | -8.615850e-47 |
Msa0647970 | Msa1223990 | 0.821718 | 3.478294e-53 | -8.615850e-47 |
Msa0647970 | Msa1263110 | 0.825859 | 3.723992e-54 | -8.615850e-47 |
Msa0647970 | Msa1281780 | 0.800880 | 1.170811e-48 | -8.615850e-47 |
Msa0647970 | Msa1284020 | 0.816212 | 6.212446e-52 | -8.615850e-47 |
Msa0647970 | Msa1319010 | 0.809507 | 1.829135e-50 | -8.615850e-47 |
Msa0647970 | Msa1368420 | 0.818058 | 2.389848e-52 | -8.615850e-47 |
Msa0647970 | Msa1376880 | 0.828604 | 8.196425e-55 | -8.615850e-47 |
Msa0647970 | Msa1383220 | 0.815932 | 7.175658e-52 | -8.615850e-47 |
Msa0647970 | Msa1398140 | 0.815893 | 7.321226e-52 | -8.615850e-47 |
Msa0647970 | Msa1405830 | 0.812856 | 3.434185e-51 | -8.615850e-47 |
Msa0647970 | Msa1407810 | 0.845293 | 4.444761e-59 | -8.615850e-47 |
Msa0647970 | Msa1433360 | 0.840122 | 1.051695e-57 | -8.615850e-47 |
Msa0647970 | Msa1437780 | 0.843949 | 1.023033e-58 | -8.615850e-47 |
Msa0647970 | Msa1455200 | 0.804876 | 1.750351e-49 | -8.615850e-47 |
Msa0647970 | Msa1455360 | 0.809080 | 2.257945e-50 | -8.615850e-47 |
Msa0647970 | Msa1458270 | 0.825890 | 3.662779e-54 | -8.615850e-47 |
Msa0121320 | Msa0647970 | 0.810688 | 1.017643e-50 | -8.615850e-47 |
Msa0163690 | Msa0647970 | 0.811835 | 5.740339e-51 | -8.615850e-47 |
Msa0166180 | Msa0647970 | 0.808484 | 3.028383e-50 | -8.615850e-47 |
Msa0217840 | Msa0647970 | 0.829463 | 5.076639e-55 | -8.615850e-47 |
Msa0217850 | Msa0647970 | 0.831673 | 1.461177e-55 | -8.615850e-47 |
Msa0224870 | Msa0647970 | 0.806366 | 8.519519e-50 | -8.615850e-47 |
Msa0374470 | Msa0647970 | 0.803529 | 3.337709e-49 | -8.615850e-47 |
Msa0374600 | Msa0647970 | 0.804444 | 2.154122e-49 | -8.615850e-47 |
Msa0386910 | Msa0647970 | 0.814996 | 1.159194e-51 | -8.615850e-47 |
Msa0401500 | Msa0647970 | 0.813702 | 2.239091e-51 | -8.615850e-47 |
Msa0448190 | Msa0647970 | 0.812320 | 4.497978e-51 | -8.615850e-47 |
Msa0454770 | Msa0647970 | 0.806123 | 9.584590e-50 | -8.615850e-47 |
Msa0464620 | Msa0647970 | 0.804552 | 2.045075e-49 | -8.615850e-47 |
Msa0298690 | Msa0647970 | 0.801226 | 9.951104e-49 | -8.615850e-47 |
Msa0318490 | Msa0647970 | 0.807248 | 5.545136e-50 | -8.615850e-47 |
Msa0319220 | Msa0647970 | 0.805316 | 1.415682e-49 | -8.615850e-47 |
Msa0333770 | Msa0647970 | 0.803217 | 3.874332e-49 | -8.615850e-47 |
Msa0354600 | Msa0647970 | 0.838271 | 3.175877e-57 | -8.615850e-47 |
Msa0357310 | Msa0647970 | 0.809778 | 1.599415e-50 | -8.615850e-47 |
Msa0357550 | Msa0647970 | 0.805117 | 1.558395e-49 | -8.615850e-47 |
Msa0362170 | Msa0647970 | 0.801357 | 9.353703e-49 | -8.615850e-47 |
Msa0510050 | Msa0647970 | 0.826748 | 2.287894e-54 | -8.615850e-47 |
Msa0518190 | Msa0647970 | 0.800529 | 1.380818e-48 | -8.615850e-47 |
Msa0523720 | Msa0647970 | 0.805857 | 1.090323e-49 | -8.615850e-47 |
Msa0531050 | Msa0647970 | 0.814310 | 1.644445e-51 | -8.615850e-47 |
Msa0546590 | Msa0647970 | 0.859391 | 4.272283e-63 | -8.615850e-47 |
Msa0567330 | Msa0647970 | 0.844293 | 8.268405e-59 | -8.615850e-47 |
Msa0567570 | Msa0647970 | 0.836234 | 1.054536e-56 | -8.615850e-47 |
Msa0576320 | Msa0647970 | 0.833741 | 4.481253e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647970 | MtrunA17_Chr4g0028271 | 89.610 | 231 | 13 | 1 | 19 | 238 | 21 | 251 | 2.00e-150 | 428 |
Msa0647970 | MtrunA17_Chr4g0028261 | 77.689 | 251 | 42 | 3 | 1 | 238 | 23 | 272 | 2.17e-134 | 388 |
Msa0647970 | MtrunA17_Chr4g0028281 | 67.460 | 252 | 67 | 3 | 1 | 239 | 1 | 250 | 1.55e-116 | 342 |
Msa0647970 | MtrunA17_Chr4g0028241 | 63.596 | 228 | 62 | 5 | 19 | 234 | 21 | 239 | 6.56e-94 | 284 |
Msa0647970 | MtrunA17_Chr2g0327401 | 58.468 | 248 | 82 | 7 | 7 | 238 | 13 | 255 | 7.81e-91 | 276 |
Msa0647970 | MtrunA17_Chr2g0327381 | 58.537 | 246 | 75 | 8 | 9 | 238 | 16 | 250 | 1.20e-83 | 259 |
Msa0647970 | MtrunA17_Chr1g0199171 | 52.549 | 255 | 88 | 6 | 1 | 238 | 5 | 243 | 4.32e-78 | 243 |
Msa0647970 | MtrunA17_Chr1g0171411 | 50.000 | 246 | 98 | 4 | 7 | 238 | 3 | 237 | 5.56e-70 | 222 |
Msa0647970 | MtrunA17_Chr2g0327371 | 52.968 | 219 | 64 | 7 | 34 | 238 | 35 | 228 | 1.17e-62 | 204 |
Msa0647970 | MtrunA17_Chr7g0234051 | 39.610 | 154 | 76 | 2 | 95 | 231 | 44 | 197 | 2.21e-30 | 117 |
Msa0647970 | MtrunA17_Chr3g0118831 | 40.000 | 155 | 75 | 4 | 95 | 233 | 92 | 244 | 4.08e-30 | 116 |
Msa0647970 | MtrunA17_Chr4g0044051 | 38.125 | 160 | 85 | 3 | 91 | 236 | 41 | 200 | 8.11e-30 | 115 |
Msa0647970 | MtrunA17_Chr5g0447441 | 38.125 | 160 | 85 | 3 | 91 | 236 | 37 | 196 | 1.58e-29 | 114 |
Msa0647970 | MtrunA17_Chr3g0118891 | 38.710 | 155 | 77 | 4 | 95 | 233 | 92 | 244 | 2.02e-29 | 114 |
Msa0647970 | MtrunA17_Chr1g0153931 | 37.576 | 165 | 85 | 4 | 88 | 236 | 83 | 245 | 4.28e-29 | 110 |
Msa0647970 | MtrunA17_Chr3g0118851 | 38.065 | 155 | 78 | 4 | 95 | 233 | 92 | 244 | 1.69e-28 | 112 |
Msa0647970 | MtrunA17_Chr8g0338461 | 38.961 | 154 | 77 | 2 | 95 | 231 | 45 | 198 | 1.81e-28 | 112 |
Msa0647970 | MtrunA17_Chr3g0118881 | 37.500 | 160 | 86 | 3 | 88 | 233 | 85 | 244 | 2.50e-28 | 112 |
Msa0647970 | MtrunA17_Chr4g0068841 | 36.810 | 163 | 89 | 3 | 88 | 236 | 46 | 208 | 2.59e-28 | 111 |
Msa0647970 | MtrunA17_Chr1g0153941 | 38.182 | 165 | 84 | 4 | 88 | 236 | 85 | 247 | 2.99e-28 | 111 |
Msa0647970 | MtrunA17_Chr3g0118861 | 38.710 | 155 | 77 | 4 | 95 | 233 | 90 | 242 | 3.92e-28 | 111 |
Msa0647970 | MtrunA17_Chr7g0249431 | 37.500 | 160 | 81 | 3 | 95 | 235 | 42 | 201 | 5.09e-28 | 110 |
Msa0647970 | MtrunA17_Chr3g0118841 | 38.065 | 155 | 78 | 4 | 95 | 233 | 93 | 245 | 5.14e-28 | 110 |
Msa0647970 | MtrunA17_Chr2g0285371 | 34.194 | 155 | 85 | 2 | 96 | 233 | 49 | 203 | 1.27e-27 | 109 |
Msa0647970 | MtrunA17_Chr4g0068861 | 36.646 | 161 | 89 | 3 | 88 | 235 | 92 | 252 | 1.29e-27 | 109 |
Msa0647970 | MtrunA17_Chr1g0153881 | 33.684 | 190 | 106 | 4 | 67 | 236 | 70 | 259 | 3.05e-27 | 108 |
Msa0647970 | MtrunA17_Chr2g0304931 | 37.342 | 158 | 83 | 5 | 86 | 228 | 43 | 199 | 3.82e-27 | 108 |
Msa0647970 | MtrunA17_Chr4g0047861 | 36.709 | 158 | 84 | 3 | 92 | 233 | 64 | 221 | 4.40e-27 | 108 |
Msa0647970 | MtrunA17_Chr2g0285381 | 33.333 | 159 | 87 | 2 | 97 | 238 | 53 | 209 | 8.30e-27 | 107 |
Msa0647970 | MtrunA17_Chr8g0385871 | 37.013 | 154 | 85 | 4 | 95 | 236 | 47 | 200 | 1.21e-25 | 103 |
Msa0647970 | MtrunA17_Chr1g0199991 | 38.217 | 157 | 79 | 5 | 95 | 234 | 47 | 202 | 2.13e-25 | 103 |
Msa0647970 | MtrunA17_Chr3g0133011 | 35.172 | 145 | 77 | 1 | 107 | 234 | 84 | 228 | 2.14e-25 | 103 |
Msa0647970 | MtrunA17_Chr4g0038311 | 38.562 | 153 | 79 | 3 | 95 | 232 | 48 | 200 | 2.53e-25 | 103 |
Msa0647970 | MtrunA17_Chr3g0093971 | 33.333 | 156 | 88 | 1 | 96 | 235 | 42 | 197 | 2.54e-25 | 103 |
Msa0647970 | MtrunA17_Chr2g0285351 | 33.333 | 156 | 86 | 2 | 96 | 233 | 48 | 203 | 3.03e-25 | 103 |
Msa0647970 | MtrunA17_Chr3g0090331 | 29.185 | 233 | 137 | 5 | 27 | 233 | 10 | 240 | 3.12e-25 | 103 |
Msa0647970 | MtrunA17_Chr3g0094811 | 40.136 | 147 | 74 | 5 | 95 | 228 | 44 | 189 | 3.97e-25 | 102 |
Msa0647970 | MtrunA17_Chr1g0165811 | 36.478 | 159 | 87 | 6 | 86 | 232 | 36 | 192 | 4.04e-25 | 99.8 |
Msa0647970 | MtrunA17_Chr2g0309521 | 36.306 | 157 | 85 | 6 | 95 | 236 | 54 | 210 | 1.10e-24 | 101 |
Msa0647970 | MtrunA17_Chr3g0131731 | 38.065 | 155 | 79 | 5 | 97 | 236 | 47 | 199 | 1.90e-24 | 100 |
Msa0647970 | MtrunA17_Chr2g0281621 | 36.184 | 152 | 83 | 3 | 95 | 232 | 49 | 200 | 3.69e-24 | 100 |
Msa0647970 | MtrunA17_Chr4g0009651 | 38.415 | 164 | 79 | 6 | 96 | 239 | 55 | 216 | 6.87e-24 | 99.4 |
Msa0647970 | MtrunA17_Chr7g0234041 | 37.419 | 155 | 72 | 4 | 95 | 231 | 41 | 188 | 7.07e-24 | 99.4 |
Msa0647970 | MtrunA17_Chr4g0020241 | 33.121 | 157 | 91 | 3 | 97 | 239 | 89 | 245 | 8.06e-24 | 99.4 |
Msa0647970 | MtrunA17_Chr4g0009711 | 33.333 | 195 | 99 | 5 | 62 | 233 | 23 | 209 | 1.06e-23 | 98.6 |
Msa0647970 | MtrunA17_Chr2g0318911 | 35.669 | 157 | 86 | 6 | 95 | 236 | 55 | 211 | 1.18e-23 | 98.6 |
Msa0647970 | MtrunA17_Chr2g0309511 | 33.758 | 157 | 89 | 4 | 95 | 236 | 54 | 210 | 1.84e-23 | 98.2 |
Msa0647970 | MtrunA17_Chr4g0009661 | 36.025 | 161 | 82 | 4 | 96 | 238 | 55 | 212 | 2.00e-23 | 97.8 |
Msa0647970 | MtrunA17_Chr4g0009681 | 37.952 | 166 | 72 | 5 | 96 | 238 | 52 | 209 | 2.30e-23 | 97.8 |
Msa0647970 | MtrunA17_Chr1g0199971 | 36.747 | 166 | 83 | 6 | 88 | 234 | 40 | 202 | 2.65e-23 | 97.4 |
Msa0647970 | MtrunA17_Chr5g0431301 | 31.902 | 163 | 97 | 3 | 88 | 237 | 37 | 198 | 2.74e-23 | 97.4 |
Msa0647970 | MtrunA17_Chr7g0221551 | 34.177 | 158 | 90 | 5 | 92 | 236 | 41 | 197 | 3.89e-23 | 97.1 |
Msa0647970 | MtrunA17_Chr7g0219051 | 35.135 | 148 | 78 | 4 | 97 | 228 | 51 | 196 | 4.34e-23 | 97.1 |
Msa0647970 | MtrunA17_Chr2g0309541 | 35.220 | 159 | 86 | 6 | 95 | 236 | 53 | 211 | 5.59e-23 | 96.7 |
Msa0647970 | MtrunA17_Chr4g0009701 | 37.267 | 161 | 80 | 4 | 97 | 239 | 56 | 213 | 6.41e-23 | 96.7 |
Msa0647970 | MtrunA17_Chr2g0279371 | 33.108 | 148 | 80 | 4 | 103 | 232 | 35 | 181 | 3.64e-22 | 90.1 |
Msa0647970 | MtrunA17_Chr3g0126051 | 33.548 | 155 | 88 | 4 | 88 | 228 | 41 | 194 | 6.16e-22 | 93.6 |
Msa0647970 | MtrunA17_Chr3g0126031 | 33.784 | 148 | 83 | 3 | 95 | 228 | 42 | 188 | 9.45e-22 | 93.2 |
Msa0647970 | MtrunA17_Chr4g0009641 | 37.500 | 144 | 79 | 4 | 96 | 238 | 55 | 188 | 3.48e-20 | 88.6 |
Msa0647970 | MtrunA17_Chr4g0009671 | 33.951 | 162 | 84 | 5 | 96 | 238 | 20 | 177 | 5.02e-19 | 85.1 |
Msa0647970 | MtrunA17_Chr4g0027731 | 30.612 | 147 | 88 | 5 | 91 | 225 | 29 | 173 | 5.46e-14 | 70.9 |
Msa0647970 | MtrunA17_Chr4g0009721 | 36.634 | 101 | 46 | 3 | 96 | 178 | 51 | 151 | 3.34e-11 | 62.4 |
Msa0647970 | MtrunA17_Chr2g0281641 | 33.913 | 115 | 62 | 3 | 133 | 233 | 7 | 121 | 3.62e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647970 | AT3G10410.1 | 57.831 | 249 | 84 | 7 | 7 | 238 | 8 | 252 | 2.99e-90 | 275 |
Msa0647970 | AT3G45010.1 | 56.800 | 250 | 85 | 5 | 6 | 237 | 9 | 253 | 2.78e-88 | 270 |
Msa0647970 | AT5G22980.1 | 56.863 | 255 | 84 | 8 | 4 | 238 | 3 | 251 | 6.93e-88 | 269 |
Msa0647970 | AT5G22960.1 | 59.649 | 171 | 60 | 4 | 70 | 239 | 8 | 170 | 2.63e-65 | 201 |
Msa0647970 | AT3G25420.1 | 41.558 | 154 | 75 | 2 | 95 | 233 | 44 | 197 | 1.33e-34 | 129 |
Msa0647970 | AT4G12910.2 | 41.026 | 156 | 75 | 2 | 95 | 233 | 49 | 204 | 5.35e-32 | 122 |
Msa0647970 | AT4G12910.1 | 41.026 | 156 | 75 | 2 | 95 | 233 | 49 | 204 | 8.53e-32 | 122 |
Msa0647970 | AT5G08260.1 | 42.581 | 155 | 72 | 5 | 95 | 233 | 53 | 206 | 1.82e-31 | 120 |
Msa0647970 | AT3G52020.1 | 40.385 | 156 | 76 | 4 | 95 | 235 | 93 | 246 | 2.32e-31 | 120 |
Msa0647970 | AT1G15000.1 | 38.926 | 149 | 76 | 2 | 91 | 224 | 31 | 179 | 5.77e-31 | 119 |
Msa0647970 | AT5G23210.3 | 39.610 | 154 | 78 | 3 | 95 | 233 | 65 | 218 | 1.46e-29 | 115 |
Msa0647970 | AT2G22920.4 | 36.129 | 155 | 80 | 3 | 96 | 232 | 40 | 193 | 1.53e-29 | 112 |
Msa0647970 | AT5G23210.1 | 39.610 | 154 | 78 | 3 | 95 | 233 | 65 | 218 | 2.65e-29 | 115 |
Msa0647970 | AT3G12240.1 | 36.250 | 160 | 73 | 4 | 96 | 232 | 43 | 196 | 3.10e-29 | 114 |
Msa0647970 | AT1G73290.2 | 32.468 | 154 | 87 | 1 | 96 | 232 | 47 | 200 | 5.24e-29 | 111 |
Msa0647970 | AT2G23010.2 | 35.294 | 153 | 81 | 2 | 97 | 232 | 41 | 192 | 6.12e-29 | 113 |
Msa0647970 | AT2G23010.1 | 35.294 | 153 | 81 | 2 | 97 | 232 | 41 | 192 | 6.37e-29 | 113 |
Msa0647970 | AT2G22920.2 | 34.973 | 183 | 94 | 5 | 68 | 232 | 18 | 193 | 9.55e-29 | 112 |
Msa0647970 | AT2G22920.1 | 36.129 | 155 | 80 | 3 | 96 | 232 | 40 | 193 | 9.75e-29 | 112 |
Msa0647970 | AT3G12220.3 | 36.875 | 160 | 72 | 4 | 96 | 232 | 42 | 195 | 2.39e-28 | 110 |
Msa0647970 | AT2G22970.2 | 33.880 | 183 | 96 | 5 | 68 | 232 | 18 | 193 | 3.19e-28 | 109 |
Msa0647970 | AT1G73300.1 | 33.117 | 154 | 86 | 1 | 96 | 232 | 48 | 201 | 3.34e-28 | 111 |
Msa0647970 | AT1G73300.2 | 33.117 | 154 | 86 | 1 | 96 | 232 | 48 | 201 | 3.34e-28 | 111 |
Msa0647970 | AT1G73270.2 | 34.416 | 154 | 84 | 1 | 96 | 232 | 48 | 201 | 4.26e-28 | 111 |
Msa0647970 | AT1G73270.1 | 34.416 | 154 | 84 | 1 | 96 | 232 | 48 | 201 | 4.27e-28 | 111 |
Msa0647970 | AT3G12220.1 | 36.875 | 160 | 72 | 4 | 96 | 232 | 42 | 195 | 4.67e-28 | 110 |
Msa0647970 | AT1G73290.3 | 32.468 | 154 | 87 | 1 | 96 | 232 | 47 | 200 | 5.28e-28 | 110 |
Msa0647970 | AT3G12203.3 | 37.419 | 155 | 78 | 4 | 96 | 232 | 24 | 177 | 9.13e-28 | 109 |
Msa0647970 | AT2G22970.4 | 33.880 | 183 | 96 | 5 | 68 | 232 | 18 | 193 | 9.58e-28 | 109 |
Msa0647970 | AT1G73290.1 | 32.468 | 154 | 87 | 1 | 96 | 232 | 47 | 200 | 1.01e-27 | 110 |
Msa0647970 | AT3G12203.1 | 37.419 | 155 | 78 | 4 | 96 | 232 | 45 | 198 | 1.16e-27 | 109 |
Msa0647970 | AT2G22970.3 | 33.880 | 183 | 96 | 5 | 68 | 232 | 18 | 193 | 1.22e-27 | 109 |
Msa0647970 | AT2G22970.1 | 33.880 | 183 | 96 | 5 | 68 | 232 | 18 | 193 | 1.31e-27 | 109 |
Msa0647970 | AT3G17180.2 | 35.897 | 156 | 85 | 4 | 93 | 233 | 51 | 206 | 2.36e-27 | 108 |
Msa0647970 | AT3G12220.2 | 36.943 | 157 | 70 | 4 | 99 | 232 | 15 | 165 | 2.84e-27 | 108 |
Msa0647970 | AT3G17180.1 | 35.897 | 156 | 85 | 4 | 93 | 233 | 51 | 206 | 2.89e-27 | 109 |
Msa0647970 | AT5G36180.1 | 32.468 | 154 | 87 | 1 | 96 | 232 | 48 | 201 | 2.94e-27 | 108 |
Msa0647970 | AT1G73310.1 | 33.117 | 154 | 86 | 1 | 96 | 232 | 48 | 201 | 3.00e-27 | 108 |
Msa0647970 | AT3G10450.4 | 32.317 | 164 | 92 | 2 | 86 | 232 | 36 | 197 | 3.33e-27 | 108 |
Msa0647970 | AT1G73310.2 | 33.117 | 154 | 86 | 1 | 96 | 232 | 48 | 201 | 3.51e-27 | 108 |
Msa0647970 | AT3G12230.1 | 35.000 | 160 | 75 | 4 | 96 | 232 | 42 | 195 | 4.20e-27 | 108 |
Msa0647970 | AT3G10450.1 | 32.317 | 164 | 92 | 2 | 86 | 232 | 36 | 197 | 4.41e-27 | 108 |
Msa0647970 | AT3G52000.1 | 34.395 | 157 | 91 | 1 | 88 | 232 | 71 | 227 | 8.94e-27 | 107 |
Msa0647970 | AT3G56540.1 | 36.486 | 148 | 78 | 4 | 88 | 221 | 87 | 232 | 9.06e-27 | 104 |
Msa0647970 | AT2G23000.1 | 33.766 | 154 | 84 | 2 | 96 | 232 | 40 | 192 | 1.04e-26 | 107 |
Msa0647970 | AT2G23000.2 | 33.766 | 154 | 84 | 2 | 96 | 232 | 40 | 192 | 1.04e-26 | 107 |
Msa0647970 | AT2G22980.3 | 33.540 | 161 | 78 | 2 | 96 | 232 | 41 | 196 | 1.08e-26 | 105 |
Msa0647970 | AT4G15100.1 | 38.608 | 158 | 83 | 3 | 95 | 238 | 58 | 215 | 1.17e-26 | 107 |
Msa0647970 | AT2G22980.4 | 33.962 | 159 | 78 | 2 | 96 | 232 | 41 | 194 | 1.22e-26 | 107 |
Msa0647970 | AT2G22980.2 | 33.962 | 159 | 78 | 2 | 96 | 232 | 41 | 194 | 1.24e-26 | 106 |
Msa0647970 | AT3G52010.1 | 35.185 | 162 | 89 | 2 | 88 | 233 | 72 | 233 | 1.49e-26 | 107 |
Msa0647970 | AT2G22980.1 | 33.962 | 159 | 78 | 2 | 96 | 232 | 41 | 194 | 1.53e-26 | 106 |
Msa0647970 | AT3G07990.1 | 36.364 | 165 | 89 | 5 | 88 | 236 | 41 | 205 | 1.58e-26 | 107 |
Msa0647970 | AT3G12203.2 | 39.716 | 141 | 66 | 4 | 110 | 232 | 1 | 140 | 1.99e-26 | 105 |
Msa0647970 | AT1G73280.2 | 31.818 | 154 | 88 | 1 | 96 | 232 | 48 | 201 | 2.25e-26 | 105 |
Msa0647970 | AT3G10450.3 | 31.788 | 151 | 86 | 1 | 99 | 232 | 4 | 154 | 3.63e-26 | 104 |
Msa0647970 | AT1G33540.1 | 32.258 | 155 | 88 | 1 | 96 | 233 | 44 | 198 | 3.94e-26 | 105 |
Msa0647970 | AT1G73280.1 | 31.818 | 154 | 88 | 1 | 96 | 232 | 48 | 201 | 3.98e-26 | 105 |
Msa0647970 | AT3G10450.2 | 31.788 | 151 | 86 | 1 | 99 | 232 | 4 | 154 | 5.25e-26 | 104 |
Msa0647970 | AT1G11080.1 | 39.735 | 151 | 73 | 4 | 95 | 229 | 64 | 212 | 5.75e-26 | 105 |
Msa0647970 | AT1G11080.2 | 39.735 | 151 | 73 | 4 | 95 | 229 | 64 | 212 | 6.27e-26 | 105 |
Msa0647970 | AT3G63470.1 | 36.184 | 152 | 81 | 4 | 95 | 230 | 95 | 246 | 6.90e-26 | 105 |
Msa0647970 | AT5G09640.1 | 32.308 | 195 | 98 | 5 | 66 | 238 | 17 | 199 | 1.32e-25 | 104 |
Msa0647970 | AT1G33540.2 | 32.237 | 152 | 86 | 1 | 99 | 233 | 4 | 155 | 1.99e-25 | 103 |
Msa0647970 | AT2G35770.1 | 36.364 | 154 | 84 | 3 | 97 | 236 | 54 | 207 | 2.34e-25 | 103 |
Msa0647970 | AT2G22990.3 | 34.395 | 157 | 79 | 4 | 96 | 232 | 38 | 190 | 2.42e-25 | 103 |
Msa0647970 | AT5G42230.1 | 35.256 | 156 | 88 | 2 | 95 | 237 | 42 | 197 | 2.58e-25 | 103 |
Msa0647970 | AT5G42230.2 | 35.256 | 156 | 88 | 2 | 95 | 237 | 42 | 197 | 2.58e-25 | 103 |
Msa0647970 | AT2G22990.4 | 34.615 | 156 | 78 | 4 | 97 | 232 | 39 | 190 | 2.70e-25 | 103 |
Msa0647970 | AT4G30810.1 | 33.548 | 155 | 89 | 3 | 94 | 234 | 51 | 205 | 2.83e-25 | 103 |
Msa0647970 | AT2G22990.1 | 34.615 | 156 | 78 | 4 | 97 | 232 | 39 | 190 | 3.13e-25 | 103 |
Msa0647970 | AT5G42240.1 | 34.615 | 156 | 89 | 2 | 95 | 237 | 46 | 201 | 3.93e-25 | 103 |
Msa0647970 | AT2G24010.1 | 37.908 | 153 | 79 | 4 | 97 | 234 | 46 | 197 | 1.08e-24 | 101 |
Msa0647970 | AT1G28110.1 | 36.184 | 152 | 83 | 5 | 95 | 233 | 45 | 195 | 2.48e-24 | 100 |
Msa0647970 | AT1G28110.2 | 36.184 | 152 | 83 | 5 | 95 | 233 | 45 | 195 | 2.48e-24 | 100 |
Msa0647970 | AT2G22990.5 | 34.014 | 147 | 82 | 3 | 97 | 232 | 39 | 181 | 3.32e-24 | 100 |
Msa0647970 | AT2G24000.1 | 37.179 | 156 | 81 | 5 | 97 | 236 | 46 | 200 | 4.01e-24 | 100 |
Msa0647970 | AT2G12480.1 | 34.416 | 154 | 88 | 2 | 97 | 237 | 47 | 200 | 4.20e-24 | 100 |
Msa0647970 | AT2G12480.2 | 34.416 | 154 | 88 | 2 | 97 | 237 | 47 | 200 | 4.31e-24 | 100 |
Msa0647970 | AT2G12480.4 | 34.416 | 154 | 88 | 2 | 97 | 237 | 47 | 200 | 4.47e-24 | 100 |
Msa0647970 | AT2G12480.3 | 34.416 | 154 | 88 | 2 | 97 | 237 | 47 | 200 | 5.10e-24 | 100 |
Msa0647970 | AT2G33530.1 | 35.526 | 152 | 84 | 5 | 95 | 233 | 47 | 197 | 1.19e-23 | 99.0 |
Msa0647970 | AT1G61130.1 | 36.076 | 158 | 87 | 3 | 95 | 238 | 45 | 202 | 1.33e-23 | 99.0 |
Msa0647970 | AT2G35780.1 | 34.810 | 158 | 87 | 4 | 88 | 229 | 37 | 194 | 3.82e-23 | 97.4 |
Msa0647970 | AT1G43780.1 | 33.974 | 156 | 82 | 3 | 97 | 235 | 53 | 204 | 4.31e-23 | 97.4 |
Msa0647970 | AT4G30610.1 | 36.538 | 156 | 82 | 5 | 95 | 234 | 46 | 200 | 6.50e-23 | 97.1 |
Msa0647970 | AT2G05850.1 | 34.969 | 163 | 87 | 4 | 88 | 232 | 71 | 232 | 1.00e-22 | 96.3 |
Msa0647970 | AT3G02110.1 | 35.669 | 157 | 87 | 3 | 97 | 239 | 53 | 209 | 1.23e-22 | 96.3 |
Msa0647970 | AT2G24010.4 | 33.929 | 168 | 80 | 5 | 97 | 234 | 17 | 183 | 3.03e-20 | 88.6 |
Msa0647970 | AT2G24010.2 | 33.929 | 168 | 80 | 5 | 97 | 234 | 46 | 212 | 5.18e-20 | 88.6 |
Msa0647970 | AT2G24010.3 | 33.929 | 168 | 80 | 5 | 97 | 234 | 17 | 183 | 5.36e-20 | 88.6 |
Msa0647970 | AT5G23210.5 | 40.517 | 116 | 54 | 3 | 133 | 233 | 8 | 123 | 1.48e-17 | 81.3 |
Msa0647970 | AT5G23210.4 | 40.000 | 115 | 54 | 3 | 134 | 233 | 8 | 122 | 5.49e-17 | 79.3 |
Msa0647970 | AT5G23210.2 | 40.000 | 115 | 54 | 3 | 134 | 233 | 8 | 122 | 8.00e-17 | 79.3 |
Msa0647970 | AT2G22990.2 | 37.662 | 77 | 41 | 2 | 159 | 232 | 4 | 76 | 2.48e-11 | 62.8 |
Msa0647970 | AT2G22990.6 | 37.662 | 77 | 41 | 2 | 159 | 232 | 4 | 76 | 2.60e-11 | 62.8 |
Msa0647970 | AT5G36180.4 | 36.486 | 74 | 47 | 0 | 159 | 232 | 26 | 99 | 3.95e-11 | 62.4 |
Msa0647970 | AT1G73310.3 | 37.838 | 74 | 46 | 0 | 159 | 232 | 26 | 99 | 4.08e-11 | 62.4 |
Msa0647970 | AT5G36180.5 | 36.486 | 74 | 47 | 0 | 159 | 232 | 26 | 99 | 4.55e-11 | 62.0 |
Msa0647970 | AT5G36180.3 | 36.486 | 74 | 47 | 0 | 159 | 232 | 26 | 99 | 4.55e-11 | 62.0 |
Msa0647970 | AT5G36180.2 | 36.486 | 74 | 47 | 0 | 159 | 232 | 26 | 99 | 5.47e-11 | 62.0 |
Msa0647970 | AT2G22980.5 | 37.838 | 74 | 46 | 0 | 159 | 232 | 4 | 77 | 5.69e-11 | 61.6 |
Find 40 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTAATTACCTTGCGGATT+TGG | 0.221438 | 4_3:-54331182 | None:intergenic |
CGTTGGTTTGGTGAAAATTT+TGG | 0.249695 | 4_3:-54330968 | None:intergenic |
CCACAAAAGAGACAAGTTAT+TGG | 0.264870 | 4_3:-54332062 | None:intergenic |
AAGAATGACTTCTATATTAC+TGG | 0.289799 | 4_3:+54332752 | Msa0647970:CDS |
ATGTTCCTGCTCTTGCATCT+AGG | 0.318626 | 4_3:+54332795 | Msa0647970:CDS |
TCACCATGAATTATATTAAC+TGG | 0.366105 | 4_3:-54331034 | None:intergenic |
ATTATATTAACTGGATCCTT+TGG | 0.371296 | 4_3:-54331025 | None:intergenic |
CCAGTCAACCATATCACAAC+TGG | 0.373577 | 4_3:-54331980 | None:intergenic |
AAGTCATTCTTAACAAACTT+AGG | 0.397900 | 4_3:-54332740 | None:intergenic |
TGTTCCTGCTCTTGCATCTA+GGG | 0.398381 | 4_3:+54332796 | Msa0647970:CDS |
TGATTTGTACGACTTCTTGC+TGG | 0.399728 | 4_3:+54332585 | Msa0647970:CDS |
GATCCAGTTAATATAATTCA+TGG | 0.424315 | 4_3:+54331031 | Msa0647970:CDS |
AGTCATTCTTAACAAACTTA+GGG | 0.434933 | 4_3:-54332739 | None:intergenic |
AGGGTTCACCATGGAAATAA+AGG | 0.441831 | 4_3:+54332815 | Msa0647970:CDS |
AGGATGCCCCAGTTGTGATA+TGG | 0.462648 | 4_3:+54331972 | Msa0647970:CDS |
TAGCTAAAACCTGTCCCAAT+TGG | 0.473861 | 4_3:-54332514 | None:intergenic |
GATATTCCACATGATGAAAC+TGG | 0.479658 | 4_3:+54332553 | Msa0647970:CDS |
TGACCGAGATCTTCAATAGA+AGG | 0.490638 | 4_3:-54331130 | None:intergenic |
AAGCTTTAACTTATTGCCAA+AGG | 0.518571 | 4_3:+54331009 | Msa0647970:CDS |
ATATGGTTGACTGGAGGTCC+AGG | 0.522115 | 4_3:+54331989 | Msa0647970:CDS |
ACGAGGAAGCGAATAGTATC+CGG | 0.523737 | 4_3:-54331158 | None:intergenic |
GTTGACCAACCAATTGGGAC+AGG | 0.528579 | 4_3:+54332505 | Msa0647970:CDS |
GCTAGTTCACTGCTGCAACC+TGG | 0.533445 | 4_3:-54332007 | None:intergenic |
GAAGATCTCGGTCACCATGC+CGG | 0.547294 | 4_3:+54331139 | Msa0647970:CDS |
CCAGTTGTGATATGGTTGAC+TGG | 0.551036 | 4_3:+54331980 | Msa0647970:CDS |
ATTACTGGAGAATCATATGC+TGG | 0.551568 | 4_3:+54332767 | Msa0647970:CDS |
CAGTCAACCATATCACAACT+GGG | 0.574498 | 4_3:-54331979 | None:intergenic |
ATCTTCAATAGAAGGACCAT+CGG | 0.575473 | 4_3:-54331122 | None:intergenic |
CTAACACCAGTTTCATCATG+TGG | 0.588201 | 4_3:-54332559 | None:intergenic |
GATGCGAGAAGTTGCGTATG+AGG | 0.589321 | 4_3:-54330918 | None:intergenic |
TACCTTGCGGATTTGGAACG+AGG | 0.592095 | 4_3:-54331175 | None:intergenic |
TAAAACCTGTCCCAATTGGT+TGG | 0.592919 | 4_3:-54332510 | None:intergenic |
GGTCCTTCTATTGAAGATCT+CGG | 0.595179 | 4_3:+54331127 | Msa0647970:CDS |
TGAACCCTAGATGCAAGAGC+AGG | 0.635146 | 4_3:-54332800 | None:intergenic |
AACGAACAATAACAAAAGAG+AGG | 0.642414 | 4_3:-54330885 | None:intergenic |
TTCCTCGTTCCAAATCCGCA+AGG | 0.666060 | 4_3:+54331173 | Msa0647970:CDS |
GAAGCGAATAGTATCCGGCA+TGG | 0.671731 | 4_3:-54331153 | None:intergenic |
GTTGTGATATGGTTGACTGG+AGG | 0.703410 | 4_3:+54331983 | Msa0647970:CDS |
CTTGCATCTAGGGTTCACCA+TGG | 0.722490 | 4_3:+54332806 | Msa0647970:CDS |
AGTCAACCATATCACAACTG+GGG | 0.752820 | 4_3:-54331978 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCTAACTATTTAATTAAATA+TGG | - | chr4_3:54331506-54331525 | None:intergenic | 10.0% |
!!! | TTTTTATTTATAATAATCAC+AGG | + | chr4_3:54332700-54332719 | Msa0647970:intron | 10.0% |
!! | TCTAACTATTTAATTAAATA+TGG | - | chr4_3:54331506-54331525 | None:intergenic | 10.0% |
!!! | TTTTTATTTATAATAATCAC+AGG | + | chr4_3:54332700-54332719 | Msa0647970:intron | 10.0% |
!!! | AAATACAAGATTTTTAATTG+CGG | - | chr4_3:54331324-54331343 | None:intergenic | 15.0% |
!! | ATTCAAAATATATTATTGTG+TGG | + | chr4_3:54331384-54331403 | Msa0647970:intron | 15.0% |
!!! | TTAGCTATAATTTTATTAGT+CGG | + | chr4_3:54331638-54331657 | Msa0647970:intron | 15.0% |
!!! | TAAAATTTGACTTAATTTTG+TGG | + | chr4_3:54331867-54331886 | Msa0647970:intron | 15.0% |
!!! | TCTTTTTTTTATTGAATTTC+AGG | + | chr4_3:54331912-54331931 | Msa0647970:intron | 15.0% |
!!! | CTAAATATCTCTAAAATTTA+CGG | - | chr4_3:54332307-54332326 | None:intergenic | 15.0% |
!! | TGTCAATAATAAAACATATT+TGG | - | chr4_3:54332434-54332453 | None:intergenic | 15.0% |
!! | AATGCTTAAAGATATTAATT+GGG | - | chr4_3:54332630-54332649 | None:intergenic | 15.0% |
!! | TAATGCTTAAAGATATTAAT+TGG | - | chr4_3:54332631-54332650 | None:intergenic | 15.0% |
!!! | AAATACAAGATTTTTAATTG+CGG | - | chr4_3:54331324-54331343 | None:intergenic | 15.0% |
!! | ATTCAAAATATATTATTGTG+TGG | + | chr4_3:54331384-54331403 | Msa0647970:intron | 15.0% |
!!! | TTAGCTATAATTTTATTAGT+CGG | + | chr4_3:54331638-54331657 | Msa0647970:intron | 15.0% |
!!! | TAAAATTTGACTTAATTTTG+TGG | + | chr4_3:54331867-54331886 | Msa0647970:intron | 15.0% |
!!! | TCTTTTTTTTATTGAATTTC+AGG | + | chr4_3:54331912-54331931 | Msa0647970:intron | 15.0% |
!!! | CTAAATATCTCTAAAATTTA+CGG | - | chr4_3:54332307-54332326 | None:intergenic | 15.0% |
!! | TGTCAATAATAAAACATATT+TGG | - | chr4_3:54332434-54332453 | None:intergenic | 15.0% |
!! | AATGCTTAAAGATATTAATT+GGG | - | chr4_3:54332630-54332649 | None:intergenic | 15.0% |
!! | TAATGCTTAAAGATATTAAT+TGG | - | chr4_3:54332631-54332650 | None:intergenic | 15.0% |
!! | ATACAAATTTAATTACCTTG+CGG | - | chr4_3:54331191-54331210 | None:intergenic | 20.0% |
!! | AATCATTCAATCAAAATTGA+AGG | - | chr4_3:54331367-54331386 | None:intergenic | 20.0% |
!! | GTATATTATTCAGAACAAAT+CGG | - | chr4_3:54331618-54331637 | None:intergenic | 20.0% |
!!! | ACTATTAATATTTGGAATGT+TGG | - | chr4_3:54331829-54331848 | None:intergenic | 20.0% |
!! | AACATTCCAAATATTAATAG+TGG | + | chr4_3:54331828-54331847 | Msa0647970:intron | 20.0% |
!! | TTCAAACCACTATTAATATT+TGG | - | chr4_3:54331837-54331856 | None:intergenic | 20.0% |
!! | TGAATCAAGAAAAAATTCTA+AGG | + | chr4_3:54331952-54331971 | Msa0647970:CDS | 20.0% |
!!! | AAGTTATTGGCAATTTTAAA+AGG | - | chr4_3:54332052-54332071 | None:intergenic | 20.0% |
!!! | TTTACAATGGTTTTAAATTG+CGG | + | chr4_3:54332161-54332180 | Msa0647970:intron | 20.0% |
!! | ATTATTGACATTATGACTAA+AGG | + | chr4_3:54332444-54332463 | Msa0647970:intron | 20.0% |
!! | AAAGATATTAATTGGGATTA+TGG | - | chr4_3:54332623-54332642 | None:intergenic | 20.0% |
!!! | CATATAGTATACACATTTTT+TGG | - | chr4_3:54332665-54332684 | None:intergenic | 20.0% |
!! | ATACAAATTTAATTACCTTG+CGG | - | chr4_3:54331191-54331210 | None:intergenic | 20.0% |
!! | AATCATTCAATCAAAATTGA+AGG | - | chr4_3:54331367-54331386 | None:intergenic | 20.0% |
!! | GTATATTATTCAGAACAAAT+CGG | - | chr4_3:54331618-54331637 | None:intergenic | 20.0% |
!!! | ACTATTAATATTTGGAATGT+TGG | - | chr4_3:54331829-54331848 | None:intergenic | 20.0% |
!! | AACATTCCAAATATTAATAG+TGG | + | chr4_3:54331828-54331847 | Msa0647970:intron | 20.0% |
!! | TTCAAACCACTATTAATATT+TGG | - | chr4_3:54331837-54331856 | None:intergenic | 20.0% |
!! | TGAATCAAGAAAAAATTCTA+AGG | + | chr4_3:54331952-54331971 | Msa0647970:CDS | 20.0% |
!!! | AAGTTATTGGCAATTTTAAA+AGG | - | chr4_3:54332052-54332071 | None:intergenic | 20.0% |
!!! | TTTACAATGGTTTTAAATTG+CGG | + | chr4_3:54332161-54332180 | Msa0647970:intron | 20.0% |
!! | ATTATTGACATTATGACTAA+AGG | + | chr4_3:54332444-54332463 | Msa0647970:intron | 20.0% |
!! | AAAGATATTAATTGGGATTA+TGG | - | chr4_3:54332623-54332642 | None:intergenic | 20.0% |
!!! | CATATAGTATACACATTTTT+TGG | - | chr4_3:54332665-54332684 | None:intergenic | 20.0% |
! | ATTATATTAACTGGATCCTT+TGG | - | chr4_3:54331028-54331047 | None:intergenic | 25.0% |
! | GATCCAGTTAATATAATTCA+TGG | + | chr4_3:54331031-54331050 | Msa0647970:CDS | 25.0% |
! | TCACCATGAATTATATTAAC+TGG | - | chr4_3:54331037-54331056 | None:intergenic | 25.0% |
! | TCAATCAAAATTGAAGGAAT+CGG | - | chr4_3:54331361-54331380 | None:intergenic | 25.0% |
! | TGAATTTGTGAAATGAAGTT+AGG | + | chr4_3:54331433-54331452 | Msa0647970:intron | 25.0% |
! | AGTTAGAATAAAATGTCATG+TGG | + | chr4_3:54331519-54331538 | Msa0647970:intron | 25.0% |
! | ATGTGACTATATAGATCTTA+AGG | + | chr4_3:54331675-54331694 | Msa0647970:intron | 25.0% |
! | TTACTTGTAGTACAATGTTA+TGG | - | chr4_3:54331703-54331722 | None:intergenic | 25.0% |
!!! | ATATCTCTAAAATTTACGGT+CGG | - | chr4_3:54332303-54332322 | None:intergenic | 25.0% |
!!! | AGGTGTTTTTTTCATTTTGT+AGG | + | chr4_3:54332464-54332483 | Msa0647970:intron | 25.0% |
!!! | TACACATTTTTTGGTATATG+TGG | - | chr4_3:54332656-54332675 | None:intergenic | 25.0% |
! | AGTCATTCTTAACAAACTTA+GGG | - | chr4_3:54332742-54332761 | None:intergenic | 25.0% |
! | AAGTCATTCTTAACAAACTT+AGG | - | chr4_3:54332743-54332762 | None:intergenic | 25.0% |
! | AAGAATGACTTCTATATTAC+TGG | + | chr4_3:54332752-54332771 | Msa0647970:CDS | 25.0% |
! | ATTATATTAACTGGATCCTT+TGG | - | chr4_3:54331028-54331047 | None:intergenic | 25.0% |
! | GATCCAGTTAATATAATTCA+TGG | + | chr4_3:54331031-54331050 | Msa0647970:CDS | 25.0% |
! | TCACCATGAATTATATTAAC+TGG | - | chr4_3:54331037-54331056 | None:intergenic | 25.0% |
! | TCAATCAAAATTGAAGGAAT+CGG | - | chr4_3:54331361-54331380 | None:intergenic | 25.0% |
! | TGAATTTGTGAAATGAAGTT+AGG | + | chr4_3:54331433-54331452 | Msa0647970:intron | 25.0% |
! | AGTTAGAATAAAATGTCATG+TGG | + | chr4_3:54331519-54331538 | Msa0647970:intron | 25.0% |
! | ATGTGACTATATAGATCTTA+AGG | + | chr4_3:54331675-54331694 | Msa0647970:intron | 25.0% |
! | TTACTTGTAGTACAATGTTA+TGG | - | chr4_3:54331703-54331722 | None:intergenic | 25.0% |
!!! | ATATCTCTAAAATTTACGGT+CGG | - | chr4_3:54332303-54332322 | None:intergenic | 25.0% |
!!! | AGGTGTTTTTTTCATTTTGT+AGG | + | chr4_3:54332464-54332483 | Msa0647970:intron | 25.0% |
!!! | TACACATTTTTTGGTATATG+TGG | - | chr4_3:54332656-54332675 | None:intergenic | 25.0% |
! | AGTCATTCTTAACAAACTTA+GGG | - | chr4_3:54332742-54332761 | None:intergenic | 25.0% |
! | AAGTCATTCTTAACAAACTT+AGG | - | chr4_3:54332743-54332762 | None:intergenic | 25.0% |
! | AAGAATGACTTCTATATTAC+TGG | + | chr4_3:54332752-54332771 | Msa0647970:CDS | 25.0% |
AACGAACAATAACAAAAGAG+AGG | - | chr4_3:54330888-54330907 | None:intergenic | 30.0% | |
! | AAGCTTTAACTTATTGCCAA+AGG | + | chr4_3:54331009-54331028 | Msa0647970:CDS | 30.0% |
ATTTAATTACCTTGCGGATT+TGG | - | chr4_3:54331185-54331204 | None:intergenic | 30.0% | |
ATAGTACAATTGCACAATTG+CGG | + | chr4_3:54331254-54331273 | Msa0647970:intron | 30.0% | |
GTGATACATTCACAATATTG+CGG | - | chr4_3:54331291-54331310 | None:intergenic | 30.0% | |
ATATTATTGTGTGGAGTCAA+AGG | + | chr4_3:54331393-54331412 | Msa0647970:intron | 30.0% | |
!!! | CTAGCTTTGTTTTATGAGAA+TGG | + | chr4_3:54332025-54332044 | Msa0647970:CDS | 30.0% |
! | TCTCTTTTGTGGAATGATTA+TGG | + | chr4_3:54332073-54332092 | Msa0647970:intron | 30.0% |
! | TTTTGTGGAATGATTATGGT+TGG | + | chr4_3:54332077-54332096 | Msa0647970:intron | 30.0% |
TTTGTGGAATGATTATGGTT+GGG | + | chr4_3:54332078-54332097 | Msa0647970:intron | 30.0% | |
TGTGTCATATGAGTTTACAA+TGG | + | chr4_3:54332148-54332167 | Msa0647970:intron | 30.0% | |
TCATTGTCAATCAATGTCTT+TGG | - | chr4_3:54332395-54332414 | None:intergenic | 30.0% | |
!!! | TTTTTTGTTGACCAACCAAT+TGG | + | chr4_3:54332499-54332518 | Msa0647970:CDS | 30.0% |
! | TTTTTGTTGACCAACCAATT+GGG | + | chr4_3:54332500-54332519 | Msa0647970:CDS | 30.0% |
!!! | CTTTTTTGCCTTTATTTCCA+TGG | - | chr4_3:54332826-54332845 | None:intergenic | 30.0% |
CATGGAAATAAAGGCAAAAA+AGG | + | chr4_3:54332824-54332843 | Msa0647970:CDS | 30.0% | |
AACGAACAATAACAAAAGAG+AGG | - | chr4_3:54330888-54330907 | None:intergenic | 30.0% | |
! | AAGCTTTAACTTATTGCCAA+AGG | + | chr4_3:54331009-54331028 | Msa0647970:CDS | 30.0% |
ATTTAATTACCTTGCGGATT+TGG | - | chr4_3:54331185-54331204 | None:intergenic | 30.0% | |
ATAGTACAATTGCACAATTG+CGG | + | chr4_3:54331254-54331273 | Msa0647970:intron | 30.0% | |
GTGATACATTCACAATATTG+CGG | - | chr4_3:54331291-54331310 | None:intergenic | 30.0% | |
ATATTATTGTGTGGAGTCAA+AGG | + | chr4_3:54331393-54331412 | Msa0647970:intron | 30.0% | |
!!! | CTAGCTTTGTTTTATGAGAA+TGG | + | chr4_3:54332025-54332044 | Msa0647970:CDS | 30.0% |
! | TCTCTTTTGTGGAATGATTA+TGG | + | chr4_3:54332073-54332092 | Msa0647970:intron | 30.0% |
! | TTTTGTGGAATGATTATGGT+TGG | + | chr4_3:54332077-54332096 | Msa0647970:intron | 30.0% |
TTTGTGGAATGATTATGGTT+GGG | + | chr4_3:54332078-54332097 | Msa0647970:intron | 30.0% | |
TGTGTCATATGAGTTTACAA+TGG | + | chr4_3:54332148-54332167 | Msa0647970:intron | 30.0% | |
TCATTGTCAATCAATGTCTT+TGG | - | chr4_3:54332395-54332414 | None:intergenic | 30.0% | |
!!! | TTTTTTGTTGACCAACCAAT+TGG | + | chr4_3:54332499-54332518 | Msa0647970:CDS | 30.0% |
! | TTTTTGTTGACCAACCAATT+GGG | + | chr4_3:54332500-54332519 | Msa0647970:CDS | 30.0% |
!!! | CTTTTTTGCCTTTATTTCCA+TGG | - | chr4_3:54332826-54332845 | None:intergenic | 30.0% |
CATGGAAATAAAGGCAAAAA+AGG | + | chr4_3:54332824-54332843 | Msa0647970:CDS | 30.0% | |
!!! | GGTGAAAATTTTGGTGTTGA+TGG | - | chr4_3:54330962-54330981 | None:intergenic | 35.0% |
!!! | CGTTGGTTTGGTGAAAATTT+TGG | - | chr4_3:54330971-54330990 | None:intergenic | 35.0% |
! | TTATAAGCTTTTCAGCTCGT+TGG | - | chr4_3:54330988-54331007 | None:intergenic | 35.0% |
! | TCTATTGATCATTTTGTCCC+TGG | + | chr4_3:54331061-54331080 | Msa0647970:CDS | 35.0% |
ATCTTCAATAGAAGGACCAT+CGG | - | chr4_3:54331125-54331144 | None:intergenic | 35.0% | |
GACTATAGTGACGATGTAAA+CGG | + | chr4_3:54331455-54331474 | Msa0647970:intron | 35.0% | |
! | TCGAACATAAGCATTGCTTT+CGG | - | chr4_3:54331568-54331587 | None:intergenic | 35.0% |
CCACAAAAGAGACAAGTTAT+TGG | - | chr4_3:54332065-54332084 | None:intergenic | 35.0% | |
!! | CCAATAACTTGTCTCTTTTG+TGG | + | chr4_3:54332062-54332081 | Msa0647970:intron | 35.0% |
CAACATCACAACTGAAATTG+TGG | - | chr4_3:54332256-54332275 | None:intergenic | 35.0% | |
GATATTCCACATGATGAAAC+TGG | + | chr4_3:54332553-54332572 | Msa0647970:CDS | 35.0% | |
ATTACTGGAGAATCATATGC+TGG | + | chr4_3:54332767-54332786 | Msa0647970:CDS | 35.0% | |
!!! | GGTGAAAATTTTGGTGTTGA+TGG | - | chr4_3:54330962-54330981 | None:intergenic | 35.0% |
!!! | CGTTGGTTTGGTGAAAATTT+TGG | - | chr4_3:54330971-54330990 | None:intergenic | 35.0% |
! | TTATAAGCTTTTCAGCTCGT+TGG | - | chr4_3:54330988-54331007 | None:intergenic | 35.0% |
! | TCTATTGATCATTTTGTCCC+TGG | + | chr4_3:54331061-54331080 | Msa0647970:CDS | 35.0% |
ATCTTCAATAGAAGGACCAT+CGG | - | chr4_3:54331125-54331144 | None:intergenic | 35.0% | |
GACTATAGTGACGATGTAAA+CGG | + | chr4_3:54331455-54331474 | Msa0647970:intron | 35.0% | |
! | TCGAACATAAGCATTGCTTT+CGG | - | chr4_3:54331568-54331587 | None:intergenic | 35.0% |
CCACAAAAGAGACAAGTTAT+TGG | - | chr4_3:54332065-54332084 | None:intergenic | 35.0% | |
!! | CCAATAACTTGTCTCTTTTG+TGG | + | chr4_3:54332062-54332081 | Msa0647970:intron | 35.0% |
CAACATCACAACTGAAATTG+TGG | - | chr4_3:54332256-54332275 | None:intergenic | 35.0% | |
GATATTCCACATGATGAAAC+TGG | + | chr4_3:54332553-54332572 | Msa0647970:CDS | 35.0% | |
ATTACTGGAGAATCATATGC+TGG | + | chr4_3:54332767-54332786 | Msa0647970:CDS | 35.0% | |
! | TCTTCTCGACGATTTTTCCA+GGG | - | chr4_3:54331081-54331100 | None:intergenic | 40.0% |
! | TTCTTCTCGACGATTTTTCC+AGG | - | chr4_3:54331082-54331101 | None:intergenic | 40.0% |
GGTCCTTCTATTGAAGATCT+CGG | + | chr4_3:54331127-54331146 | Msa0647970:CDS | 40.0% | |
TGACCGAGATCTTCAATAGA+AGG | - | chr4_3:54331133-54331152 | None:intergenic | 40.0% | |
AGTCAACCATATCACAACTG+GGG | - | chr4_3:54331981-54332000 | None:intergenic | 40.0% | |
CAGTCAACCATATCACAACT+GGG | - | chr4_3:54331982-54332001 | None:intergenic | 40.0% | |
GAATGATTATGGTTGGGACA+AGG | + | chr4_3:54332084-54332103 | Msa0647970:intron | 40.0% | |
TAAAACCTGTCCCAATTGGT+TGG | - | chr4_3:54332513-54332532 | None:intergenic | 40.0% | |
TAGCTAAAACCTGTCCCAAT+TGG | - | chr4_3:54332517-54332536 | None:intergenic | 40.0% | |
CTAACACCAGTTTCATCATG+TGG | - | chr4_3:54332562-54332581 | None:intergenic | 40.0% | |
! | TGATTTGTACGACTTCTTGC+TGG | + | chr4_3:54332585-54332604 | Msa0647970:CDS | 40.0% |
AGGGTTCACCATGGAAATAA+AGG | + | chr4_3:54332815-54332834 | Msa0647970:CDS | 40.0% | |
! | TCTTCTCGACGATTTTTCCA+GGG | - | chr4_3:54331081-54331100 | None:intergenic | 40.0% |
! | TTCTTCTCGACGATTTTTCC+AGG | - | chr4_3:54331082-54331101 | None:intergenic | 40.0% |
GGTCCTTCTATTGAAGATCT+CGG | + | chr4_3:54331127-54331146 | Msa0647970:CDS | 40.0% | |
TGACCGAGATCTTCAATAGA+AGG | - | chr4_3:54331133-54331152 | None:intergenic | 40.0% | |
AGTCAACCATATCACAACTG+GGG | - | chr4_3:54331981-54332000 | None:intergenic | 40.0% | |
CAGTCAACCATATCACAACT+GGG | - | chr4_3:54331982-54332001 | None:intergenic | 40.0% | |
GAATGATTATGGTTGGGACA+AGG | + | chr4_3:54332084-54332103 | Msa0647970:intron | 40.0% | |
TAAAACCTGTCCCAATTGGT+TGG | - | chr4_3:54332513-54332532 | None:intergenic | 40.0% | |
TAGCTAAAACCTGTCCCAAT+TGG | - | chr4_3:54332517-54332536 | None:intergenic | 40.0% | |
CTAACACCAGTTTCATCATG+TGG | - | chr4_3:54332562-54332581 | None:intergenic | 40.0% | |
! | TGATTTGTACGACTTCTTGC+TGG | + | chr4_3:54332585-54332604 | Msa0647970:CDS | 40.0% |
AGGGTTCACCATGGAAATAA+AGG | + | chr4_3:54332815-54332834 | Msa0647970:CDS | 40.0% | |
!! | AGCTTTTCAGCTCGTTGGTT+TGG | - | chr4_3:54330983-54331002 | None:intergenic | 45.0% |
!! | TCGTTTTTCAGCGATTCCGA+TGG | + | chr4_3:54331106-54331125 | Msa0647970:CDS | 45.0% |
ACGAGGAAGCGAATAGTATC+CGG | - | chr4_3:54331161-54331180 | None:intergenic | 45.0% | |
GCTTATGTTCGATGAGATCC+AGG | + | chr4_3:54331576-54331595 | Msa0647970:intron | 45.0% | |
TCGATGAGATCCAGGTCAAA+AGG | + | chr4_3:54331584-54331603 | Msa0647970:intron | 45.0% | |
! | GGTACAACAACCTTTTGACC+TGG | - | chr4_3:54331597-54331616 | None:intergenic | 45.0% |
CCAGTCAACCATATCACAAC+TGG | - | chr4_3:54331983-54332002 | None:intergenic | 45.0% | |
CCAGTTGTGATATGGTTGAC+TGG | + | chr4_3:54331980-54331999 | Msa0647970:CDS | 45.0% | |
GTTGTGATATGGTTGACTGG+AGG | + | chr4_3:54331983-54332002 | Msa0647970:CDS | 45.0% | |
ATGTTCCTGCTCTTGCATCT+AGG | + | chr4_3:54332795-54332814 | Msa0647970:CDS | 45.0% | |
TGTTCCTGCTCTTGCATCTA+GGG | + | chr4_3:54332796-54332815 | Msa0647970:CDS | 45.0% | |
!! | AGCTTTTCAGCTCGTTGGTT+TGG | - | chr4_3:54330983-54331002 | None:intergenic | 45.0% |
!! | TCGTTTTTCAGCGATTCCGA+TGG | + | chr4_3:54331106-54331125 | Msa0647970:CDS | 45.0% |
ACGAGGAAGCGAATAGTATC+CGG | - | chr4_3:54331161-54331180 | None:intergenic | 45.0% | |
GCTTATGTTCGATGAGATCC+AGG | + | chr4_3:54331576-54331595 | Msa0647970:intron | 45.0% | |
TCGATGAGATCCAGGTCAAA+AGG | + | chr4_3:54331584-54331603 | Msa0647970:intron | 45.0% | |
! | GGTACAACAACCTTTTGACC+TGG | - | chr4_3:54331597-54331616 | None:intergenic | 45.0% |
CCAGTCAACCATATCACAAC+TGG | - | chr4_3:54331983-54332002 | None:intergenic | 45.0% | |
CCAGTTGTGATATGGTTGAC+TGG | + | chr4_3:54331980-54331999 | Msa0647970:CDS | 45.0% | |
GTTGTGATATGGTTGACTGG+AGG | + | chr4_3:54331983-54332002 | Msa0647970:CDS | 45.0% | |
ATGTTCCTGCTCTTGCATCT+AGG | + | chr4_3:54332795-54332814 | Msa0647970:CDS | 45.0% | |
TGTTCCTGCTCTTGCATCTA+GGG | + | chr4_3:54332796-54332815 | Msa0647970:CDS | 45.0% | |
GATGCGAGAAGTTGCGTATG+AGG | - | chr4_3:54330921-54330940 | None:intergenic | 50.0% | |
GAAGCGAATAGTATCCGGCA+TGG | - | chr4_3:54331156-54331175 | None:intergenic | 50.0% | |
TTCCTCGTTCCAAATCCGCA+AGG | + | chr4_3:54331173-54331192 | Msa0647970:CDS | 50.0% | |
! | TACCTTGCGGATTTGGAACG+AGG | - | chr4_3:54331178-54331197 | None:intergenic | 50.0% |
AGGATGCCCCAGTTGTGATA+TGG | + | chr4_3:54331972-54331991 | Msa0647970:CDS | 50.0% | |
ATATGGTTGACTGGAGGTCC+AGG | + | chr4_3:54331989-54332008 | Msa0647970:CDS | 50.0% | |
GTTGACCAACCAATTGGGAC+AGG | + | chr4_3:54332505-54332524 | Msa0647970:CDS | 50.0% | |
TGAACCCTAGATGCAAGAGC+AGG | - | chr4_3:54332803-54332822 | None:intergenic | 50.0% | |
! | CTTGCATCTAGGGTTCACCA+TGG | + | chr4_3:54332806-54332825 | Msa0647970:CDS | 50.0% |
GATGCGAGAAGTTGCGTATG+AGG | - | chr4_3:54330921-54330940 | None:intergenic | 50.0% | |
GAAGCGAATAGTATCCGGCA+TGG | - | chr4_3:54331156-54331175 | None:intergenic | 50.0% | |
TTCCTCGTTCCAAATCCGCA+AGG | + | chr4_3:54331173-54331192 | Msa0647970:CDS | 50.0% | |
! | TACCTTGCGGATTTGGAACG+AGG | - | chr4_3:54331178-54331197 | None:intergenic | 50.0% |
AGGATGCCCCAGTTGTGATA+TGG | + | chr4_3:54331972-54331991 | Msa0647970:CDS | 50.0% | |
ATATGGTTGACTGGAGGTCC+AGG | + | chr4_3:54331989-54332008 | Msa0647970:CDS | 50.0% | |
GTTGACCAACCAATTGGGAC+AGG | + | chr4_3:54332505-54332524 | Msa0647970:CDS | 50.0% | |
TGAACCCTAGATGCAAGAGC+AGG | - | chr4_3:54332803-54332822 | None:intergenic | 50.0% | |
! | CTTGCATCTAGGGTTCACCA+TGG | + | chr4_3:54332806-54332825 | Msa0647970:CDS | 50.0% |
GAAGATCTCGGTCACCATGC+CGG | + | chr4_3:54331139-54331158 | Msa0647970:CDS | 55.0% | |
GCTAGTTCACTGCTGCAACC+TGG | - | chr4_3:54332010-54332029 | None:intergenic | 55.0% | |
GAAGATCTCGGTCACCATGC+CGG | + | chr4_3:54331139-54331158 | Msa0647970:CDS | 55.0% | |
GCTAGTTCACTGCTGCAACC+TGG | - | chr4_3:54332010-54332029 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 54330869 | 54332856 | 54330869 | ID=Msa0647970;Name=Msa0647970 |
chr4_3 | mRNA | 54330869 | 54332856 | 54330869 | ID=Msa0647970-mRNA-1;Parent=Msa0647970;Name=Msa0647970-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0.33|0|1|1|1|4|0|239 |
chr4_3 | exon | 54330869 | 54331194 | 54330869 | ID=Msa0647970-mRNA-1:exon:13728;Parent=Msa0647970-mRNA-1 |
chr4_3 | exon | 54331934 | 54332071 | 54331934 | ID=Msa0647970-mRNA-1:exon:13729;Parent=Msa0647970-mRNA-1 |
chr4_3 | exon | 54332486 | 54332606 | 54332486 | ID=Msa0647970-mRNA-1:exon:13730;Parent=Msa0647970-mRNA-1 |
chr4_3 | exon | 54332722 | 54332856 | 54332722 | ID=Msa0647970-mRNA-1:exon:13731;Parent=Msa0647970-mRNA-1 |
chr4_3 | CDS | 54330869 | 54331194 | 54330869 | ID=Msa0647970-mRNA-1:cds;Parent=Msa0647970-mRNA-1 |
chr4_3 | CDS | 54331934 | 54332071 | 54331934 | ID=Msa0647970-mRNA-1:cds;Parent=Msa0647970-mRNA-1 |
chr4_3 | CDS | 54332486 | 54332606 | 54332486 | ID=Msa0647970-mRNA-1:cds;Parent=Msa0647970-mRNA-1 |
chr4_3 | CDS | 54332722 | 54332856 | 54332722 | ID=Msa0647970-mRNA-1:cds;Parent=Msa0647970-mRNA-1 |
Gene Sequence |
Protein sequence |