Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813860 | XP_003615868.1 | 95.221 | 565 | 13 | 1 | 1 | 551 | 1 | 565 | 0.0 | 1093 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813860 | sp|B9DFS6|SNX2B_ARATH | 65.758 | 587 | 150 | 11 | 1 | 551 | 1 | 572 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813860 | G7JZQ0 | 95.221 | 565 | 13 | 1 | 1 | 551 | 1 | 565 | 0.0 | 1093 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021210 | Msa0813860 | 0.804048 | 2.604627e-49 | -8.615850e-47 |
| Msa0022750 | Msa0813860 | -0.804274 | 2.336505e-49 | -8.615850e-47 |
| Msa0026430 | Msa0813860 | 0.813896 | 2.029838e-51 | -8.615850e-47 |
| Msa0026910 | Msa0813860 | 0.804172 | 2.453606e-49 | -8.615850e-47 |
| Msa0035150 | Msa0813860 | 0.803874 | 2.831083e-49 | -8.615850e-47 |
| Msa0044000 | Msa0813860 | 0.801356 | 9.356962e-49 | -8.615850e-47 |
| Msa0052400 | Msa0813860 | 0.800298 | 1.539082e-48 | -8.615850e-47 |
| Msa0058490 | Msa0813860 | 0.802161 | 6.397319e-49 | -8.615850e-47 |
| Msa0058510 | Msa0813860 | 0.808218 | 3.450151e-50 | -8.615850e-47 |
| Msa0090570 | Msa0813860 | 0.815244 | 1.020738e-51 | -8.615850e-47 |
| Msa0097840 | Msa0813860 | 0.824539 | 7.639819e-54 | -8.615850e-47 |
| Msa0114430 | Msa0813860 | 0.803810 | 2.918885e-49 | -8.615850e-47 |
| Msa0638360 | Msa0813860 | 0.805677 | 1.189049e-49 | -8.615850e-47 |
| Msa0638540 | Msa0813860 | 0.821057 | 4.942840e-53 | -8.615850e-47 |
| Msa0682680 | Msa0813860 | 0.800449 | 1.433532e-48 | -8.615850e-47 |
| Msa0710270 | Msa0813860 | 0.801084 | 1.063782e-48 | -8.615850e-47 |
| Msa0711130 | Msa0813860 | 0.840573 | 8.017890e-58 | -8.615850e-47 |
| Msa0740640 | Msa0813860 | 0.800818 | 1.205445e-48 | -8.615850e-47 |
| Msa0750650 | Msa0813860 | 0.818646 | 1.758625e-52 | -8.615850e-47 |
| Msa0753720 | Msa0813860 | 0.805352 | 1.391691e-49 | -8.615850e-47 |
| Msa0757800 | Msa0813860 | 0.800341 | 1.508229e-48 | -8.615850e-47 |
| Msa0808080 | Msa0813860 | 0.815551 | 8.726431e-52 | -8.615850e-47 |
| Msa0813860 | Msa0816560 | 0.811161 | 8.041909e-51 | -8.615850e-47 |
| Msa0813860 | Msa0849030 | 0.806236 | 9.073700e-50 | -8.615850e-47 |
| Msa0813860 | Msa0857300 | 0.802352 | 5.842412e-49 | -8.615850e-47 |
| Msa0813860 | Msa0903780 | 0.832964 | 6.997138e-56 | -8.615850e-47 |
| Msa0813860 | Msa0907950 | 0.800652 | 1.303386e-48 | -8.615850e-47 |
| Msa0813860 | Msa0936390 | 0.804991 | 1.655851e-49 | -8.615850e-47 |
| Msa0813860 | Msa0953120 | 0.802368 | 5.799347e-49 | -8.615850e-47 |
| Msa0813860 | Msa0969520 | 0.824594 | 7.415754e-54 | -8.615850e-47 |
| Msa0813860 | Msa0969810 | 0.801581 | 8.415251e-49 | -8.615850e-47 |
| Msa0813860 | Msa1041670 | 0.802767 | 4.799003e-49 | -8.615850e-47 |
| Msa0813860 | Msa1068870 | 0.802713 | 4.924132e-49 | -8.615850e-47 |
| Msa0813860 | Msa1072900 | 0.800640 | 1.311118e-48 | -8.615850e-47 |
| Msa0813860 | Msa1087480 | 0.809335 | 1.991161e-50 | -8.615850e-47 |
| Msa0813860 | Msa1100050 | 0.809319 | 2.007099e-50 | -8.615850e-47 |
| Msa0813860 | Msa1137570 | 0.824086 | 9.763600e-54 | -8.615850e-47 |
| Msa0813860 | Msa1188710 | 0.819232 | 1.293962e-52 | -8.615850e-47 |
| Msa0813860 | Msa1205590 | 0.801506 | 8.719293e-49 | -8.615850e-47 |
| Msa0813860 | Msa1231820 | 0.819411 | 1.178126e-52 | -8.615850e-47 |
| Msa0813860 | Msa1232740 | 0.802157 | 6.409056e-49 | -8.615850e-47 |
| Msa0813860 | Msa1242660 | 0.803666 | 3.126644e-49 | -8.615850e-47 |
| Msa0813860 | Msa1250530 | 0.824494 | 7.829891e-54 | -8.615850e-47 |
| Msa0813860 | Msa1274520 | 0.811432 | 7.021897e-51 | -8.615850e-47 |
| Msa0813860 | Msa1297530 | 0.820630 | 6.197009e-53 | -8.615850e-47 |
| Msa0813860 | Msa1305810 | 0.800880 | 1.170973e-48 | -8.615850e-47 |
| Msa0813860 | Msa1313320 | 0.805328 | 1.407990e-49 | -8.615850e-47 |
| Msa0813860 | Msa1323690 | 0.827877 | 1.227198e-54 | -8.615850e-47 |
| Msa0813860 | Msa1336040 | 0.807026 | 6.178612e-50 | -8.615850e-47 |
| Msa0813860 | Msa1336710 | 0.803501 | 3.382168e-49 | -8.615850e-47 |
| Msa0813860 | Msa1418240 | 0.805805 | 1.118107e-49 | -8.615850e-47 |
| Msa0813860 | Msa1419990 | 0.815656 | 8.265667e-52 | -8.615850e-47 |
| Msa0813860 | Msa1426910 | 0.810311 | 1.227679e-50 | -8.615850e-47 |
| Msa0813860 | Msa1435270 | 0.807132 | 5.868098e-50 | -8.615850e-47 |
| Msa0813860 | Msa1454570 | 0.809136 | 2.196422e-50 | -8.615850e-47 |
| Msa0813860 | Msa1454960 | 0.801215 | 1.000260e-48 | -8.615850e-47 |
| Msa0127800 | Msa0813860 | 0.806938 | 6.450912e-50 | -8.615850e-47 |
| Msa0180500 | Msa0813860 | 0.823661 | 1.228379e-53 | -8.615850e-47 |
| Msa0201500 | Msa0813860 | 0.830810 | 2.380613e-55 | -8.615850e-47 |
| Msa0237310 | Msa0813860 | 0.803588 | 3.245074e-49 | -8.615850e-47 |
| Msa0368320 | Msa0813860 | 0.818131 | 2.300070e-52 | -8.615850e-47 |
| Msa0382370 | Msa0813860 | 0.827114 | 1.870794e-54 | -8.615850e-47 |
| Msa0411390 | Msa0813860 | 0.803624 | 3.189525e-49 | -8.615850e-47 |
| Msa0423520 | Msa0813860 | 0.813789 | 2.142174e-51 | -8.615850e-47 |
| Msa0432160 | Msa0813860 | 0.812663 | 3.786345e-51 | -8.615850e-47 |
| Msa0439970 | Msa0813860 | 0.803725 | 3.039053e-49 | -8.615850e-47 |
| Msa0453350 | Msa0813860 | 0.810851 | 9.382769e-51 | -8.615850e-47 |
| Msa0476680 | Msa0813860 | 0.814448 | 1.532409e-51 | -8.615850e-47 |
| Msa0253200 | Msa0813860 | 0.808487 | 3.022833e-50 | -8.615850e-47 |
| Msa0274730 | Msa0813860 | 0.802681 | 4.998357e-49 | -8.615850e-47 |
| Msa0292030 | Msa0813860 | 0.809744 | 1.626117e-50 | -8.615850e-47 |
| Msa0343850 | Msa0813860 | 0.816352 | 5.782044e-52 | -8.615850e-47 |
| Msa0359030 | Msa0813860 | 0.825157 | 5.462488e-54 | -8.615850e-47 |
| Msa0485240 | Msa0813860 | 0.801058 | 1.077112e-48 | -8.615850e-47 |
| Msa0498650 | Msa0813860 | 0.832568 | 8.775833e-56 | -8.615850e-47 |
| Msa0510840 | Msa0813860 | 0.811772 | 5.922700e-51 | -8.615850e-47 |
| Msa0521010 | Msa0813860 | 0.812307 | 4.527353e-51 | -8.615850e-47 |
| Msa0587030 | Msa0813860 | 0.801065 | 1.073287e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813860 | MtrunA17_Chr5g0431661 | 95.221 | 565 | 13 | 1 | 1 | 551 | 1 | 565 | 0.0 | 1093 |
| Msa0813860 | MtrunA17_Chr5g0437691 | 61.243 | 547 | 153 | 10 | 21 | 551 | 13 | 516 | 0.0 | 627 |
| Msa0813860 | MtrunA17_Chr1g0178331 | 25.238 | 420 | 241 | 13 | 135 | 536 | 27 | 391 | 1.53e-24 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813860 | AT5G07120.1 | 65.758 | 587 | 150 | 11 | 1 | 551 | 1 | 572 | 0.0 | 724 |
| Msa0813860 | AT5G07120.2 | 65.758 | 587 | 150 | 11 | 1 | 551 | 1 | 572 | 0.0 | 724 |
| Msa0813860 | AT5G58440.1 | 65.085 | 590 | 158 | 11 | 1 | 549 | 1 | 583 | 0.0 | 706 |
| Msa0813860 | AT5G07120.3 | 65.480 | 562 | 143 | 11 | 1 | 526 | 1 | 547 | 0.0 | 684 |
| Msa0813860 | AT5G06140.1 | 26.161 | 409 | 251 | 9 | 135 | 536 | 25 | 389 | 6.53e-27 | 113 |
Find 137 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGGCTTCATCTAAAATATT+TGG | 0.114952 | 5_3:+45151283 | Msa0813860:CDS |
| GCGTCTGCGTTAGGTGAATT+AGG | 0.169531 | 5_3:-45149626 | None:intergenic |
| GGAGAGACGATGGGTGAATT+AGG | 0.187986 | 5_3:+45150794 | Msa0813860:CDS |
| AGGACGAATTTACCGGATTT+TGG | 0.197729 | 5_3:+45149857 | Msa0813860:CDS |
| GGATTTGTTGAGGTTGTTTA+AGG | 0.204934 | 5_3:+45150261 | Msa0813860:CDS |
| GGCATCTTCAGTGGCTCTTA+TGG | 0.216954 | 5_3:-45151350 | None:intergenic |
| GGATGTGGCTTCGAGGGTTT+TGG | 0.256808 | 5_3:+45150153 | Msa0813860:CDS |
| CGGCTTCATCTAAAATATTT+GGG | 0.264556 | 5_3:+45151284 | Msa0813860:CDS |
| TCGGAAGAGTGATGAGTTTA+GGG | 0.285034 | 5_3:+45150087 | Msa0813860:CDS |
| GAAAGGATTTGTAGTTAATC+AGG | 0.312278 | 5_3:+45154454 | Msa0813860:CDS |
| GAGAATTACGGTTTCGAATC+CGG | 0.326585 | 5_3:+45149763 | Msa0813860:CDS |
| GGAGAAATATTTGAGGAGAT+TGG | 0.338535 | 5_3:+45150048 | Msa0813860:CDS |
| CGTCTGCGTTAGGTGAATTA+GGG | 0.338670 | 5_3:-45149625 | None:intergenic |
| TTCGGAAGAGTGATGAGTTT+AGG | 0.343726 | 5_3:+45150086 | Msa0813860:CDS |
| TACGGTTTCGAATCCGGTTA+AGG | 0.354816 | 5_3:+45149769 | Msa0813860:CDS |
| TTCCGTGATATGAATTGCTT+TGG | 0.359645 | 5_3:-45155003 | None:intergenic |
| TGAGAATGAAGAAGCTGTTT+CGG | 0.360286 | 5_3:+45150844 | Msa0813860:CDS |
| TTCGGAGTATTTGAGAATTA+CGG | 0.362441 | 5_3:+45149751 | Msa0813860:CDS |
| TAAGGAGTTGAAGCAGTCTA+TGG | 0.362442 | 5_3:+45150279 | Msa0813860:CDS |
| TGTTAAAGCACAGCAAGATA+TGG | 0.372932 | 5_3:+45150772 | Msa0813860:CDS |
| GAATTCTCTTGCTCCTTAAC+CGG | 0.373957 | 5_3:-45149782 | None:intergenic |
| GACACTTTCTGATCGGTTAT+CGG | 0.383875 | 5_3:+45149922 | Msa0813860:CDS |
| GATACACTTCACGAATATCT+TGG | 0.384570 | 5_3:+45151148 | Msa0813860:CDS |
| TACGACCAGGACGAATTTAC+CGG | 0.386868 | 5_3:+45149850 | Msa0813860:CDS |
| GATGTGTTTGGCTGCTTCAT+AGG | 0.389707 | 5_3:+45154836 | Msa0813860:three_prime_UTR |
| TGGCGGATCATCCGGTGATT+CGG | 0.400285 | 5_3:+45150068 | Msa0813860:CDS |
| GAGAGACGATGGGTGAATTA+GGG | 0.402041 | 5_3:+45150795 | Msa0813860:CDS |
| CTGTGCTTTAACAAGTGATT+CGG | 0.402881 | 5_3:-45150762 | None:intergenic |
| TTCTCAGACTGTGAAGCATT+TGG | 0.403844 | 5_3:+45150949 | Msa0813860:CDS |
| AGCAGTCTATGGCGAATGAT+TGG | 0.406221 | 5_3:+45150290 | Msa0813860:CDS |
| TCCTAGTGAGGTTGTGCAAC+CGG | 0.409003 | 5_3:+45150225 | Msa0813860:CDS |
| TGAGCAGAGGAGAGTGGCAT+TGG | 0.413983 | 5_3:+45150027 | Msa0813860:CDS |
| GTGAAAATTGCGTCTGCGTT+AGG | 0.416563 | 5_3:-45149635 | None:intergenic |
| GAAGCTGCCGAAGCAGTTGA+TGG | 0.437498 | 5_3:+45150186 | Msa0813860:CDS |
| CTGAGAAAATTGCTAATGTC+TGG | 0.440599 | 5_3:+45154681 | Msa0813860:CDS |
| GAGGAGATTGGCGGATCATC+CGG | 0.443190 | 5_3:+45150060 | Msa0813860:CDS |
| TAAGAGTATTGTGGAGAGTC+AGG | 0.446853 | 5_3:+45149982 | Msa0813860:CDS |
| AGTTTCTTGCAAAGAAAGAA+AGG | 0.458734 | 5_3:+45150350 | Msa0813860:CDS |
| TGCCAATGCAGGAAAACAAT+AGG | 0.461698 | 5_3:+45154378 | Msa0813860:intron |
| ATCGCCGAGCTTCGTTTCAC+CGG | 0.464931 | 5_3:+45149550 | Msa0813860:CDS |
| GCAGTCTATGGCGAATGATT+GGG | 0.464967 | 5_3:+45150291 | Msa0813860:CDS |
| AAGGCTTGATAGAGAGAGGC+AGG | 0.465238 | 5_3:+45154412 | Msa0813860:CDS |
| GAGGGAACGAATTTGGTGTT+CGG | 0.466687 | 5_3:+45149879 | Msa0813860:CDS |
| TCATCGTTTGTTTCTGAAAG+AGG | 0.471210 | 5_3:-45149401 | None:intergenic |
| AATTCGTTCCCTCCAAAATC+CGG | 0.473922 | 5_3:-45149869 | None:intergenic |
| ACGAATTTGGTGTTCGGAGA+AGG | 0.475572 | 5_3:+45149885 | Msa0813860:CDS |
| AATAAATCAAAAGATGTGTT+TGG | 0.477791 | 5_3:+45154824 | Msa0813860:three_prime_UTR |
| AAGCTGCCGAAGCAGTTGAT+GGG | 0.478618 | 5_3:+45150187 | Msa0813860:CDS |
| CTCTCCACAATACTCTTATC+CGG | 0.481829 | 5_3:-45149977 | None:intergenic |
| CATCGTTTGTTTCTGAAAGA+GGG | 0.483841 | 5_3:-45149400 | None:intergenic |
| TCAAGGGAAGCTTCCGTTGG+TGG | 0.487398 | 5_3:+45150123 | Msa0813860:CDS |
| GTTGGTGGGTTCGACGGATG+TGG | 0.498991 | 5_3:+45150138 | Msa0813860:CDS |
| GAGTCAGGTGATGCAGAAGC+AGG | 0.501041 | 5_3:+45149997 | Msa0813860:CDS |
| GTTAAAGCACAGCAAGATAT+GGG | 0.501430 | 5_3:+45150773 | Msa0813860:CDS |
| CAAGGGAAGCTTCCGTTGGT+GGG | 0.504272 | 5_3:+45150124 | Msa0813860:CDS |
| TGGCATTGGAGAAATATTTG+AGG | 0.504425 | 5_3:+45150041 | Msa0813860:CDS |
| ATCAAGGACTCGGAAGTTAG+AGG | 0.505613 | 5_3:+45151315 | Msa0813860:CDS |
| GAAAACAATAGGAGTGAACT+TGG | 0.506953 | 5_3:+45154389 | Msa0813860:CDS |
| TTCGACGGATGTGGCTTCGA+GGG | 0.511073 | 5_3:+45150147 | Msa0813860:CDS |
| GTTGTGCAACCGGCGAAAGG+TGG | 0.512000 | 5_3:+45150235 | Msa0813860:CDS |
| ACGAAGCTCGGCGATGAGAG+AGG | 0.514828 | 5_3:-45149542 | None:intergenic |
| TCGGAAGTTAGAGGAGCTAC+AGG | 0.514954 | 5_3:+45151324 | Msa0813860:CDS |
| GCTTCCGTTGGTGGGTTCGA+CGG | 0.515115 | 5_3:+45150132 | Msa0813860:CDS |
| ACATTTACACATCATTCAAA+AGG | 0.515257 | 5_3:+45154888 | Msa0813860:three_prime_UTR |
| TCATCACTCTTCCGAATCAC+CGG | 0.518186 | 5_3:-45150079 | None:intergenic |
| GTTTCTTGCAAAGAAAGAAA+GGG | 0.521397 | 5_3:+45150351 | Msa0813860:CDS |
| GACTTCTTAAACATGTTGAA+AGG | 0.527354 | 5_3:+45154437 | Msa0813860:CDS |
| AATTCGAATTCGATTGTGCC+TGG | 0.532154 | 5_3:+45149800 | Msa0813860:CDS |
| TTCTAAGCCGCTTGTTGTCG+AGG | 0.533178 | 5_3:+45150318 | Msa0813860:CDS |
| GGAAGATGATTCACCGTCGA+AGG | 0.533736 | 5_3:-45149660 | None:intergenic |
| AGCAGGAGTTTGTTGAGCAG+AGG | 0.537850 | 5_3:+45150014 | Msa0813860:CDS |
| GTTCGACGGATGTGGCTTCG+AGG | 0.539979 | 5_3:+45150146 | Msa0813860:CDS |
| GCTTGTTGTCGAGGAAGATA+AGG | 0.541787 | 5_3:+45150327 | Msa0813860:CDS |
| ACAATACTCTTATCCGGCCT+AGG | 0.542148 | 5_3:-45149971 | None:intergenic |
| CAGAGAATATGAGCGGATCA+AGG | 0.542532 | 5_3:+45151387 | Msa0813860:CDS |
| GAATACAGACATTCTGAGAA+TGG | 0.542825 | 5_3:-45154796 | None:intergenic |
| TGACTCTTGCATCTTTCACA+AGG | 0.545605 | 5_3:+45154943 | Msa0813860:three_prime_UTR |
| GCAAGATATGGGAGAGACGA+TGG | 0.548370 | 5_3:+45150784 | Msa0813860:CDS |
| AAATCCCTCCCACCTTTCGC+CGG | 0.548404 | 5_3:-45150244 | None:intergenic |
| TTATCTTCCTCGACAACAAG+CGG | 0.550409 | 5_3:-45150325 | None:intergenic |
| GTTTGTTGAGCAGAGGAGAG+TGG | 0.556183 | 5_3:+45150021 | Msa0813860:CDS |
| TGTCGGAGTATTAACACCGT+TGG | 0.556277 | 5_3:-45149681 | None:intergenic |
| TGAAATTCGCGGTGGTGCTG+CGG | 0.556521 | 5_3:-45149599 | None:intergenic |
| GCCGAGCTTCGTTTCACCGG+TGG | 0.562127 | 5_3:+45149553 | Msa0813860:CDS |
| TTGTGCAACCGGCGAAAGGT+GGG | 0.563435 | 5_3:+45150236 | Msa0813860:CDS |
| CAGTCTATGGCGAATGATTG+GGG | 0.564990 | 5_3:+45150292 | Msa0813860:CDS |
| TCGGAGAAGGTTTAAAGATG+TGG | 0.566622 | 5_3:+45149898 | Msa0813860:CDS |
| GGCTTCATCTAAAATATTTG+GGG | 0.566719 | 5_3:+45151285 | Msa0813860:CDS |
| GAAATATTTGAGGAGATTGG+CGG | 0.569501 | 5_3:+45150051 | Msa0813860:CDS |
| GAGTGTTATTGCTCCTAGTG+AGG | 0.570189 | 5_3:+45150213 | Msa0813860:CDS |
| GACGATGGGTGAATTAGGGT+TGG | 0.575302 | 5_3:+45150799 | Msa0813860:CDS |
| TGCAACCGGCGAAAGGTGGG+AGG | 0.575320 | 5_3:+45150239 | Msa0813860:CDS |
| CGAAGCTCGGCGATGAGAGA+GGG | 0.575452 | 5_3:-45149541 | None:intergenic |
| GACCAAAGCAATTCATATCA+CGG | 0.576017 | 5_3:+45155001 | Msa0813860:three_prime_UTR |
| AATTCGCGGTGGTGCTGCGG+CGG | 0.577596 | 5_3:-45149596 | None:intergenic |
| GCCGGTTGCACAACCTCACT+AGG | 0.580249 | 5_3:-45150226 | None:intergenic |
| ACAATAGGAGTGAACTTGGA+AGG | 0.583354 | 5_3:+45154393 | Msa0813860:CDS |
| ATGTGGTGACACTTTCTGAT+CGG | 0.585031 | 5_3:+45149915 | Msa0813860:CDS |
| GTAAATCATACTCTAACTAC+CGG | 0.585584 | 5_3:+45149474 | Msa0813860:CDS |
| AAAATCCGGTAAATTCGTCC+TGG | 0.587987 | 5_3:-45149855 | None:intergenic |
| GAGGTTGTGCAACCGGCGAA+AGG | 0.589926 | 5_3:+45150232 | Msa0813860:CDS |
| GGTTCAAGGGAAGCTTCCGT+TGG | 0.590903 | 5_3:+45150120 | Msa0813860:CDS |
| AAGGTGGGAGGGATTTGTTG+AGG | 0.594759 | 5_3:+45150251 | Msa0813860:CDS |
| CAAGATATGGGAGAGACGAT+GGG | 0.599204 | 5_3:+45150785 | Msa0813860:CDS |
| GGGGTGACAAATCAAGGACT+CGG | 0.602420 | 5_3:+45151305 | Msa0813860:CDS |
| AGCTGCCGAAGCAGTTGATG+GGG | 0.602715 | 5_3:+45150188 | Msa0813860:CDS |
| AAAGTTGTTGAAGACACAAG+TGG | 0.605480 | 5_3:+45154707 | Msa0813860:CDS |
| TTGGAAGGCTTGATAGAGAG+AGG | 0.617020 | 5_3:+45154408 | Msa0813860:CDS |
| AGCTGTTTCGGAATCTCAGA+GGG | 0.618180 | 5_3:+45150856 | Msa0813860:CDS |
| ACACGAAGTTTCTCCGATGG+AGG | 0.620179 | 5_3:+45149701 | Msa0813860:CDS |
| TGCTGCGGCGGAGATAAAAG+TGG | 0.620718 | 5_3:-45149584 | None:intergenic |
| GCAACCGGCGAAAGGTGGGA+GGG | 0.621908 | 5_3:+45150240 | Msa0813860:CDS |
| TCCACCGGTGAAACGAAGCT+CGG | 0.624045 | 5_3:-45149554 | None:intergenic |
| AAAAGTGGATCGGAATCCAC+CGG | 0.627675 | 5_3:-45149569 | None:intergenic |
| CGGCGGAGATAAAAGTGGAT+CGG | 0.629103 | 5_3:-45149579 | None:intergenic |
| CCGACACGAAGTTTCTCCGA+TGG | 0.630365 | 5_3:+45149698 | Msa0813860:CDS |
| AGCTCGGCGATGAGAGAGGG+TGG | 0.634590 | 5_3:-45149538 | None:intergenic |
| CGGTTATCGGAGGCGTATCG+CGG | 0.638186 | 5_3:+45149935 | Msa0813860:CDS |
| AGGCTTGATAGAGAGAGGCA+GGG | 0.638864 | 5_3:+45154413 | Msa0813860:CDS |
| GTACGAGCTACTGACATGAA+AGG | 0.639142 | 5_3:+45150878 | Msa0813860:CDS |
| AGAGCGTGGACATCACGCTC+CGG | 0.645909 | 5_3:-45149493 | None:intergenic |
| GACGGTGAATCATCTTCCAA+CGG | 0.649843 | 5_3:+45149665 | Msa0813860:CDS |
| TTACGTATTTGATTACGACC+AGG | 0.650570 | 5_3:+45149837 | Msa0813860:CDS |
| ATTGTGAGAATCAGAGAGCG+TGG | 0.654194 | 5_3:-45149507 | None:intergenic |
| TAGGCCGGATAAGAGTATTG+TGG | 0.654470 | 5_3:+45149973 | Msa0813860:CDS |
| ACTTTCTGATCGGTTATCGG+AGG | 0.660578 | 5_3:+45149925 | Msa0813860:CDS |
| GCTGCCGAAGCAGTTGATGG+GGG | 0.662311 | 5_3:+45150189 | Msa0813860:CDS |
| ACATCCGTCGAACCCACCAA+CGG | 0.664667 | 5_3:-45150136 | None:intergenic |
| AAGCTGTTTCGGAATCTCAG+AGG | 0.673178 | 5_3:+45150855 | Msa0813860:CDS |
| GCTTCATCTAAAATATTTGG+GGG | 0.680484 | 5_3:+45151286 | Msa0813860:CDS |
| GTAACATAACTATTACTACC+AGG | 0.682772 | 5_3:-45149818 | None:intergenic |
| CCATCGGAGAAACTTCGTGT+CGG | 0.686789 | 5_3:-45149698 | None:intergenic |
| TTGCAATCAGAGAATATGAG+CGG | 0.689296 | 5_3:+45151380 | Msa0813860:CDS |
| ATACTCTTATCCGGCCTAGG+CGG | 0.697597 | 5_3:-45149968 | None:intergenic |
| TCTATGGCGAATGATTGGGG+TGG | 0.719791 | 5_3:+45150295 | Msa0813860:CDS |
| TGAAAATAACAACACCACAG+AGG | 0.721492 | 5_3:+45149367 | Msa0813860:CDS |
| AGGGTGAAAATGTTCCTCTG+TGG | 0.777324 | 5_3:-45149381 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTGTTTTTTATTTTGATT+TGG | + | chr5_3:45151419-45151438 | Msa0813860:intron | 10.0% |
| !! | TTAAATTTACATGAAAAATT+AGG | - | chr5_3:45151858-45151877 | None:intergenic | 10.0% |
| !!! | ATCTATTTTAATGATATTTT+TGG | + | chr5_3:45151913-45151932 | Msa0813860:intron | 10.0% |
| !!! | AGTCAAATTTTATTAATTTT+TGG | + | chr5_3:45154577-45154596 | Msa0813860:intron | 10.0% |
| !!! | ATTATTTTATTGATGTTATG+AGG | + | chr5_3:45150681-45150700 | Msa0813860:intron | 15.0% |
| !! | TTCATGTAAATTTAAGTATT+TGG | + | chr5_3:45151863-45151882 | Msa0813860:intron | 15.0% |
| !!! | TAAATTTAAGTATTTGGTTT+GGG | + | chr5_3:45151869-45151888 | Msa0813860:intron | 15.0% |
| !! | AAAAAATAATATACCACTAT+AGG | - | chr5_3:45152273-45152292 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGTTTGAAAACT+CGG | + | chr5_3:45152285-45152304 | Msa0813860:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGACCAAT+AGG | + | chr5_3:45152685-45152704 | Msa0813860:intron | 15.0% |
| !! | TAAGAATAAAAATAACAGAA+CGG | - | chr5_3:45152958-45152977 | None:intergenic | 15.0% |
| !! | ATATGAAAATATGAAAACTT+TGG | + | chr5_3:45153092-45153111 | Msa0813860:intron | 15.0% |
| !!! | AGGACAAAATAATAAATTTT+TGG | + | chr5_3:45153516-45153535 | Msa0813860:intron | 15.0% |
| !! | AATAAGCTAAAAACAGTTTA+TGG | - | chr5_3:45150520-45150539 | None:intergenic | 20.0% |
| !! | AATAGCAATCATATTTGTAA+AGG | - | chr5_3:45151617-45151636 | None:intergenic | 20.0% |
| !! | CTACAAAATACAAATACAAA+GGG | - | chr5_3:45151682-45151701 | None:intergenic | 20.0% |
| !! | TCTACAAAATACAAATACAA+AGG | - | chr5_3:45151683-45151702 | None:intergenic | 20.0% |
| !!! | ATTATTAGTCTTATTGTTTG+TGG | + | chr5_3:45151799-45151818 | Msa0813860:intron | 20.0% |
| !!! | TTATTAGTCTTATTGTTTGT+GGG | + | chr5_3:45151800-45151819 | Msa0813860:intron | 20.0% |
| !! | GTAAATTTAAGTATTTGGTT+TGG | + | chr5_3:45151868-45151887 | Msa0813860:intron | 20.0% |
| !!! | AAGTTAAGAATTCAAGTTTT+GGG | - | chr5_3:45151979-45151998 | None:intergenic | 20.0% |
| !! | AATAACTGTAGTATACAATA+CGG | - | chr5_3:45152557-45152576 | None:intergenic | 20.0% |
| !! | GTTTGTATATTACAGTTATT+AGG | + | chr5_3:45153357-45153376 | Msa0813860:intron | 20.0% |
| !!! | TAAAAATGAGTTCTAGATTT+AGG | + | chr5_3:45153436-45153455 | Msa0813860:intron | 20.0% |
| !!! | AAAAATGAGTTCTAGATTTA+GGG | + | chr5_3:45153437-45153456 | Msa0813860:intron | 20.0% |
| !! | TGATATTAATGTAAATGAGA+TGG | + | chr5_3:45153550-45153569 | Msa0813860:intron | 20.0% |
| !! | TACAACCAAAATATTAAAGA+TGG | + | chr5_3:45153713-45153732 | Msa0813860:intron | 20.0% |
| !!! | ATCATCCATCTTTAATATTT+TGG | - | chr5_3:45153721-45153740 | None:intergenic | 20.0% |
| !!! | ATGTTTTAAAATGTTATACC+TGG | + | chr5_3:45154234-45154253 | Msa0813860:intron | 20.0% |
| !! | TCTGATTAACTTAAGTTAAT+AGG | + | chr5_3:45154649-45154668 | Msa0813860:intron | 20.0% |
| !! | ATTAACTTAAGTTAATAGGT+GGG | + | chr5_3:45154653-45154672 | Msa0813860:intron | 20.0% |
| !! | AATAAATCAAAAGATGTGTT+TGG | + | chr5_3:45154824-45154843 | Msa0813860:three_prime_UTR | 20.0% |
| ! | TGCACTTTCCTTAATAATAA+CGG | + | chr5_3:45151071-45151090 | Msa0813860:intron | 25.0% |
| ! | CAACAATTAAACCTATTTAG+TGG | - | chr5_3:45151102-45151121 | None:intergenic | 25.0% |
| !! | TTTTAAATCGCAAACTATTC+AGG | - | chr5_3:45151486-45151505 | None:intergenic | 25.0% |
| !! | GAATAGTTTGCGATTTAAAA+TGG | + | chr5_3:45151486-45151505 | Msa0813860:intron | 25.0% |
| ! | TTAAGATGTTAGAGTTGTTA+GGG | + | chr5_3:45151775-45151794 | Msa0813860:intron | 25.0% |
| !!! | CAAGTTAAGAATTCAAGTTT+TGG | - | chr5_3:45151980-45151999 | None:intergenic | 25.0% |
| ! | CAAAACTTGAATTCTTAACT+TGG | + | chr5_3:45151978-45151997 | Msa0813860:intron | 25.0% |
| ! | ATGAACTCAAAAAAAGAGAA+AGG | - | chr5_3:45152022-45152041 | None:intergenic | 25.0% |
| ! | GAGAGAATAATATAGGAATT+AGG | - | chr5_3:45152072-45152091 | None:intergenic | 25.0% |
| ! | AGAGAATAATACATGAATAG+CGG | - | chr5_3:45152094-45152113 | None:intergenic | 25.0% |
| ! | AGAGAATAATACATGAATAG+AGG | - | chr5_3:45152094-45152113 | None:intergenic | 25.0% |
| ! | TTGCATGATAACTTAAAGTT+TGG | + | chr5_3:45152147-45152166 | Msa0813860:intron | 25.0% |
| ! | TGCATGATAACTTAAAGTTT+GGG | + | chr5_3:45152148-45152167 | Msa0813860:intron | 25.0% |
| !! | TATAGAGCTATGCTTTAAAT+GGG | - | chr5_3:45152371-45152390 | None:intergenic | 25.0% |
| !! | ATATAGAGCTATGCTTTAAA+TGG | - | chr5_3:45152372-45152391 | None:intergenic | 25.0% |
| !! | ATTTAAAGCATAGCTCTATA+TGG | + | chr5_3:45152371-45152390 | Msa0813860:intron | 25.0% |
| ! | TATACTAGTGAGTAGTAATT+AGG | - | chr5_3:45152642-45152661 | None:intergenic | 25.0% |
| ! | TACTACTCACTAGTATAAAT+TGG | + | chr5_3:45152645-45152664 | Msa0813860:intron | 25.0% |
| !! | CTAGTATAAATTGGAGTTTT+AGG | + | chr5_3:45152654-45152673 | Msa0813860:intron | 25.0% |
| !!! | TAAATTGGAGTTTTAGGTTT+TGG | + | chr5_3:45152660-45152679 | Msa0813860:intron | 25.0% |
| !!! | AAATTGGAGTTTTAGGTTTT+GGG | + | chr5_3:45152661-45152680 | Msa0813860:intron | 25.0% |
| !!! | TTTTTTTGACCAATAGGTTT+TGG | + | chr5_3:45152691-45152710 | Msa0813860:intron | 25.0% |
| !!! | TTTTTTGACCAATAGGTTTT+GGG | + | chr5_3:45152692-45152711 | Msa0813860:intron | 25.0% |
| ! | AATTAAATCCCAAAACCTAT+TGG | - | chr5_3:45152703-45152722 | None:intergenic | 25.0% |
| ! | ATTCAATGTGCTGAATTTAT+AGG | + | chr5_3:45152724-45152743 | Msa0813860:intron | 25.0% |
| ! | TTCAATGTGCTGAATTTATA+GGG | + | chr5_3:45152725-45152744 | Msa0813860:intron | 25.0% |
| ! | ATGATGAACGAACTATATAA+CGG | - | chr5_3:45152798-45152817 | None:intergenic | 25.0% |
| ! | TTCAAATTTCAAATCCAAAC+AGG | - | chr5_3:45153010-45153029 | None:intergenic | 25.0% |
| ! | TTATATGGTCTATATTGTCA+AGG | + | chr5_3:45153069-45153088 | Msa0813860:intron | 25.0% |
| ! | GTATGATAACTTAAAGTCAA+AGG | + | chr5_3:45153168-45153187 | Msa0813860:intron | 25.0% |
| !! | ATTACAGTTATTAGGTTGTT+AGG | + | chr5_3:45153365-45153384 | Msa0813860:intron | 25.0% |
| ! | TTGAACTAATTACTAGTTAG+TGG | + | chr5_3:45153391-45153410 | Msa0813860:intron | 25.0% |
| ! | TATACCAGTAACTAGTAATA+AGG | - | chr5_3:45153418-45153437 | None:intergenic | 25.0% |
| ! | TATTAATGTAAATGAGATGG+TGG | + | chr5_3:45153553-45153572 | Msa0813860:intron | 25.0% |
| ! | AGTATCTTAGATTATCTCTA+AGG | - | chr5_3:45153677-45153696 | None:intergenic | 25.0% |
| !!! | AATTTTAATGCAAGAGAATC+AGG | - | chr5_3:45153809-45153828 | None:intergenic | 25.0% |
| ! | TTTATTTGTAAAATCCCATC+TGG | + | chr5_3:45153872-45153891 | Msa0813860:intron | 25.0% |
| !! | TGATAATGTTTCACAATAGT+AGG | - | chr5_3:45153925-45153944 | None:intergenic | 25.0% |
| ! | AAATACTGTATTCAACAAAC+TGG | + | chr5_3:45153956-45153975 | Msa0813860:intron | 25.0% |
| ! | CTATGTAATATGATTTCAGT+GGG | + | chr5_3:45153979-45153998 | Msa0813860:intron | 25.0% |
| ! | AAACATCATCCATTAAAAGT+AGG | - | chr5_3:45154111-45154130 | None:intergenic | 25.0% |
| ! | AATTATAAGATGATGAAGTC+TGG | - | chr5_3:45154211-45154230 | None:intergenic | 25.0% |
| ! | TATAAATGGGTCTAATCTTA+TGG | + | chr5_3:45154532-45154551 | Msa0813860:intron | 25.0% |
| ! | GATTAACTTAAGTTAATAGG+TGG | + | chr5_3:45154652-45154671 | Msa0813860:intron | 25.0% |
| ! | TTAACTTAAGTTAATAGGTG+GGG | + | chr5_3:45154654-45154673 | Msa0813860:intron | 25.0% |
| ! | ACATTTACACATCATTCAAA+AGG | + | chr5_3:45154888-45154907 | Msa0813860:three_prime_UTR | 25.0% |
| GTAAATCATACTCTAACTAC+CGG | + | chr5_3:45149474-45149493 | Msa0813860:CDS | 30.0% | |
| !!! | AATTAGGGTTTTGAAATTCG+CGG | - | chr5_3:45149613-45149632 | None:intergenic | 30.0% |
| ! | TTCGGAGTATTTGAGAATTA+CGG | + | chr5_3:45149751-45149770 | Msa0813860:CDS | 30.0% |
| GTAACATAACTATTACTACC+AGG | - | chr5_3:45149821-45149840 | None:intergenic | 30.0% | |
| AGTTTCTTGCAAAGAAAGAA+AGG | + | chr5_3:45150350-45150369 | Msa0813860:CDS | 30.0% | |
| GTTTCTTGCAAAGAAAGAAA+GGG | + | chr5_3:45150351-45150370 | Msa0813860:CDS | 30.0% | |
| GAACTTGAACAACAAATCAA+TGG | + | chr5_3:45150379-45150398 | Msa0813860:intron | 30.0% | |
| !! | CTTATTTTCATAAGCTCTGT+AGG | + | chr5_3:45150534-45150553 | Msa0813860:intron | 30.0% |
| TTATTGATGTTATGAGGATG+TGG | + | chr5_3:45150687-45150706 | Msa0813860:intron | 30.0% | |
| CAAATATATGTACCATAGCT+TGG | + | chr5_3:45151029-45151048 | Msa0813860:intron | 30.0% | |
| GCACTTTCCTTAATAATAAC+GGG | + | chr5_3:45151072-45151091 | Msa0813860:intron | 30.0% | |
| ! | TTTTCCATTTTATGCATAGC+AGG | + | chr5_3:45151126-45151145 | Msa0813860:intron | 30.0% |
| ! | CGGCTTCATCTAAAATATTT+GGG | + | chr5_3:45151284-45151303 | Msa0813860:CDS | 30.0% |
| ! | GGCTTCATCTAAAATATTTG+GGG | + | chr5_3:45151285-45151304 | Msa0813860:CDS | 30.0% |
| ! | GCTTCATCTAAAATATTTGG+GGG | + | chr5_3:45151286-45151305 | Msa0813860:CDS | 30.0% |
| ! | TTCTCTGATTGCAACATTTT+TGG | - | chr5_3:45151374-45151393 | None:intergenic | 30.0% |
| GACACAAAATACAACTTTGA+TGG | - | chr5_3:45151565-45151584 | None:intergenic | 30.0% | |
| GATAACAAATGACCAATCAT+GGG | - | chr5_3:45151595-45151614 | None:intergenic | 30.0% | |
| GTTAAGATGTTAGAGTTGTT+AGG | + | chr5_3:45151774-45151793 | Msa0813860:intron | 30.0% | |
| ! | TTAACTTGGTATCATTTACC+AGG | + | chr5_3:45151992-45152011 | Msa0813860:intron | 30.0% |
| TAACTTGGTATCATTTACCA+GGG | + | chr5_3:45151993-45152012 | Msa0813860:intron | 30.0% | |
| ! | AATAGCGGAGAGAATAATAT+AGG | - | chr5_3:45152079-45152098 | None:intergenic | 30.0% |
| AGAAAACATTTCATCTGCTT+GGG | + | chr5_3:45152221-45152240 | Msa0813860:intron | 30.0% | |
| ATTAGATTAGGTTCCTATAG+TGG | + | chr5_3:45152257-45152276 | Msa0813860:intron | 30.0% | |
| !! | GTCATTTTGTTAGTAAGCTT+TGG | + | chr5_3:45152578-45152597 | Msa0813860:intron | 30.0% |
| AAACAAAAAAGAGAGAGAGA+AGG | - | chr5_3:45152855-45152874 | None:intergenic | 30.0% | |
| ! | GACTGTGGAGTAATTTTATA+TGG | + | chr5_3:45153054-45153073 | Msa0813860:intron | 30.0% |
| AAAACTTTGGTCATCTGTAA+AGG | + | chr5_3:45153105-45153124 | Msa0813860:intron | 30.0% | |
| TTGTAACAACTAAAGCTTAC+AGG | + | chr5_3:45153330-45153349 | Msa0813860:intron | 30.0% | |
| TGTAACAACTAAAGCTTACA+GGG | + | chr5_3:45153331-45153350 | Msa0813860:intron | 30.0% | |
| TACGACTCAAGTATTCTATA+AGG | - | chr5_3:45153607-45153626 | None:intergenic | 30.0% | |
| TTAGTCGAAAATCTTCCATT+AGG | + | chr5_3:45153895-45153914 | Msa0813860:intron | 30.0% | |
| ACAATAGTAGGATTTCCTAA+TGG | - | chr5_3:45153913-45153932 | None:intergenic | 30.0% | |
| GCTATGTAATATGATTTCAG+TGG | + | chr5_3:45153978-45153997 | Msa0813860:intron | 30.0% | |
| GACTTCTTAAACATGTTGAA+AGG | + | chr5_3:45154437-45154456 | Msa0813860:CDS | 30.0% | |
| GAAAGGATTTGTAGTTAATC+AGG | + | chr5_3:45154454-45154473 | Msa0813860:CDS | 30.0% | |
| TGAAAATAACAACACCACAG+AGG | + | chr5_3:45149367-45149386 | Msa0813860:CDS | 35.0% | |
| !! | CATCGTTTGTTTCTGAAAGA+GGG | - | chr5_3:45149403-45149422 | None:intergenic | 35.0% |
| !! | TCATCGTTTGTTTCTGAAAG+AGG | - | chr5_3:45149404-45149423 | None:intergenic | 35.0% |
| !! | GAGATCGGAGTCTTTTAATT+CGG | + | chr5_3:45149733-45149752 | Msa0813860:CDS | 35.0% |
| TTACGTATTTGATTACGACC+AGG | + | chr5_3:45149837-45149856 | Msa0813860:CDS | 35.0% | |
| ! | TGGCATTGGAGAAATATTTG+AGG | + | chr5_3:45150041-45150060 | Msa0813860:CDS | 35.0% |
| GGAGAAATATTTGAGGAGAT+TGG | + | chr5_3:45150048-45150067 | Msa0813860:CDS | 35.0% | |
| GAAATATTTGAGGAGATTGG+CGG | + | chr5_3:45150051-45150070 | Msa0813860:CDS | 35.0% | |
| !! | GGATTTGTTGAGGTTGTTTA+AGG | + | chr5_3:45150261-45150280 | Msa0813860:CDS | 35.0% |
| TTCATAAGCTCTGTAGGTTT+AGG | + | chr5_3:45150540-45150559 | Msa0813860:intron | 35.0% | |
| TGACAAGCTATCAAACACAT+GGG | - | chr5_3:45150656-45150675 | None:intergenic | 35.0% | |
| CTGTGCTTTAACAAGTGATT+CGG | - | chr5_3:45150765-45150784 | None:intergenic | 35.0% | |
| TGTTAAAGCACAGCAAGATA+TGG | + | chr5_3:45150772-45150791 | Msa0813860:CDS | 35.0% | |
| GTTAAAGCACAGCAAGATAT+GGG | + | chr5_3:45150773-45150792 | Msa0813860:CDS | 35.0% | |
| TGAGAATGAAGAAGCTGTTT+CGG | + | chr5_3:45150844-45150863 | Msa0813860:CDS | 35.0% | |
| TGGATTGCCCGTTATTATTA+AGG | - | chr5_3:45151082-45151101 | None:intergenic | 35.0% | |
| GTATCCTGCTATGCATAAAA+TGG | - | chr5_3:45151133-45151152 | None:intergenic | 35.0% | |
| GATACACTTCACGAATATCT+TGG | + | chr5_3:45151148-45151167 | Msa0813860:CDS | 35.0% | |
| ! | TTTTTCTGCTCTTGATTGCA+AGG | - | chr5_3:45151257-45151276 | None:intergenic | 35.0% |
| AAGAGCAGAAAAACTTGAAG+CGG | + | chr5_3:45151264-45151283 | Msa0813860:CDS | 35.0% | |
| ! | GCGGCTTCATCTAAAATATT+TGG | + | chr5_3:45151283-45151302 | Msa0813860:CDS | 35.0% |
| !!! | AACATTTTTGGCATCTTCAG+TGG | - | chr5_3:45151362-45151381 | None:intergenic | 35.0% |
| TTGCAATCAGAGAATATGAG+CGG | + | chr5_3:45151380-45151399 | Msa0813860:CDS | 35.0% | |
| GGATAACAAATGACCAATCA+TGG | - | chr5_3:45151596-45151615 | None:intergenic | 35.0% | |
| TCAATGTAGATGCATATAGC+AGG | - | chr5_3:45151739-45151758 | None:intergenic | 35.0% | |
| !!! | AGAATTCAAGTTTTGGGTCA+GGG | - | chr5_3:45151973-45151992 | None:intergenic | 35.0% |
| !!! | AAGAATTCAAGTTTTGGGTC+AGG | - | chr5_3:45151974-45151993 | None:intergenic | 35.0% |
| AGTTATCATGCAATCAACAG+AGG | - | chr5_3:45152140-45152159 | None:intergenic | 35.0% | |
| TCTTCAACCTTTCACTTCAA+AGG | - | chr5_3:45152197-45152216 | None:intergenic | 35.0% | |
| ! | CAAGCAGATGAAATGTTTTC+TGG | - | chr5_3:45152222-45152241 | None:intergenic | 35.0% |
| CAGAAAACATTTCATCTGCT+TGG | + | chr5_3:45152220-45152239 | Msa0813860:intron | 35.0% | |
| ! | TGTGTGTGGAGTATTAGATT+AGG | + | chr5_3:45152245-45152264 | Msa0813860:intron | 35.0% |
| AAAACCATAGGTACCCATTA+GGG | - | chr5_3:45152490-45152509 | None:intergenic | 35.0% | |
| TAAAACCATAGGTACCCATT+AGG | - | chr5_3:45152491-45152510 | None:intergenic | 35.0% | |
| CATGAGACAGATAAAACCAT+AGG | - | chr5_3:45152502-45152521 | None:intergenic | 35.0% | |
| TTATCTGTCTCATGTTTGCA+AGG | + | chr5_3:45152508-45152527 | Msa0813860:intron | 35.0% | |
| !! | AATTGATTTCCCTCCCTTTT+TGG | + | chr5_3:45152822-45152841 | Msa0813860:intron | 35.0% |
| TAGATGACTTTGTTCCAACT+TGG | + | chr5_3:45152874-45152893 | Msa0813860:intron | 35.0% | |
| AGATGACTTTGTTCCAACTT+GGG | + | chr5_3:45152875-45152894 | Msa0813860:intron | 35.0% | |
| AATAACCAGAACACTGAGTA+AGG | - | chr5_3:45153132-45153151 | None:intergenic | 35.0% | |
| ! | TACTCAGTGTTCTGGTTATT+TGG | + | chr5_3:45153132-45153151 | Msa0813860:intron | 35.0% |
| ! | TGTTCTGGTTATTTGGTTAG+AGG | + | chr5_3:45153139-45153158 | Msa0813860:intron | 35.0% |
| CGAGTAGATGAAATGGTTTA+TGG | - | chr5_3:45153196-45153215 | None:intergenic | 35.0% | |
| GTAACAACTAAAGCTTACAG+GGG | + | chr5_3:45153332-45153351 | Msa0813860:intron | 35.0% | |
| TGGACCTTATTACTAGTTAC+TGG | + | chr5_3:45153411-45153430 | Msa0813860:intron | 35.0% | |
| ! | AGATTTTCGACTAACCAGAT+GGG | - | chr5_3:45153889-45153908 | None:intergenic | 35.0% |
| ! | AAGATTTTCGACTAACCAGA+TGG | - | chr5_3:45153890-45153909 | None:intergenic | 35.0% |
| ! | GTTTAGTCTTTCATGCATTC+TGG | + | chr5_3:45154175-45154194 | Msa0813860:intron | 35.0% |
| !! | TCTTTCATGCATTCTGGTTT+GGG | + | chr5_3:45154181-45154200 | Msa0813860:intron | 35.0% |
| AATGTTATACCTGGCATTTC+TGG | + | chr5_3:45154243-45154262 | Msa0813860:intron | 35.0% | |
| ACAGAGGAAATAGACAAGAA+GGG | - | chr5_3:45154333-45154352 | None:intergenic | 35.0% | |
| AACAGAGGAAATAGACAAGA+AGG | - | chr5_3:45154334-45154353 | None:intergenic | 35.0% | |
| GAAAACAATAGGAGTGAACT+TGG | + | chr5_3:45154389-45154408 | Msa0813860:CDS | 35.0% | |
| TGTGTTCATCGCTGTATAAA+TGG | + | chr5_3:45154518-45154537 | Msa0813860:intron | 35.0% | |
| GTGTTCATCGCTGTATAAAT+GGG | + | chr5_3:45154519-45154538 | Msa0813860:intron | 35.0% | |
| CTGAGAAAATTGCTAATGTC+TGG | + | chr5_3:45154681-45154700 | Msa0813860:CDS | 35.0% | |
| AAAGTTGTTGAAGACACAAG+TGG | + | chr5_3:45154707-45154726 | Msa0813860:CDS | 35.0% | |
| ! | GAATACAGACATTCTGAGAA+TGG | - | chr5_3:45154799-45154818 | None:intergenic | 35.0% |
| GACCAAAGCAATTCATATCA+CGG | + | chr5_3:45155001-45155020 | Msa0813860:three_prime_UTR | 35.0% | |
| TTCCGTGATATGAATTGCTT+TGG | - | chr5_3:45155006-45155025 | None:intergenic | 35.0% | |
| ! | GCAATTTTCACTTCCTTCGA+CGG | + | chr5_3:45149647-45149666 | Msa0813860:CDS | 40.0% |
| TCTCGAAAAAACTCCTCCAT+CGG | - | chr5_3:45149717-45149736 | None:intergenic | 40.0% | |
| !!! | TGGAGGAGTTTTTTCGAGAT+CGG | + | chr5_3:45149718-45149737 | Msa0813860:CDS | 40.0% |
| GAGAATTACGGTTTCGAATC+CGG | + | chr5_3:45149763-45149782 | Msa0813860:CDS | 40.0% | |
| GAATTCTCTTGCTCCTTAAC+CGG | - | chr5_3:45149785-45149804 | None:intergenic | 40.0% | |
| AATTCGAATTCGATTGTGCC+TGG | + | chr5_3:45149800-45149819 | Msa0813860:CDS | 40.0% | |
| AAAATCCGGTAAATTCGTCC+TGG | - | chr5_3:45149858-45149877 | None:intergenic | 40.0% | |
| ! | AGGACGAATTTACCGGATTT+TGG | + | chr5_3:45149857-45149876 | Msa0813860:CDS | 40.0% |
| ! | ACGAATTTACCGGATTTTGG+AGG | + | chr5_3:45149860-45149879 | Msa0813860:CDS | 40.0% |
| ! | CGAATTTACCGGATTTTGGA+GGG | + | chr5_3:45149861-45149880 | Msa0813860:CDS | 40.0% |
| AATTCGTTCCCTCCAAAATC+CGG | - | chr5_3:45149872-45149891 | None:intergenic | 40.0% | |
| !! | GATTTTGGAGGGAACGAATT+TGG | + | chr5_3:45149872-45149891 | Msa0813860:CDS | 40.0% |
| TCGGAGAAGGTTTAAAGATG+TGG | + | chr5_3:45149898-45149917 | Msa0813860:CDS | 40.0% | |
| ATGTGGTGACACTTTCTGAT+CGG | + | chr5_3:45149915-45149934 | Msa0813860:CDS | 40.0% | |
| GACACTTTCTGATCGGTTAT+CGG | + | chr5_3:45149922-45149941 | Msa0813860:CDS | 40.0% | |
| !!! | TTTTTTTATACCGCCTAGGC+CGG | + | chr5_3:45149958-45149977 | Msa0813860:CDS | 40.0% |
| CTCTCCACAATACTCTTATC+CGG | - | chr5_3:45149980-45149999 | None:intergenic | 40.0% | |
| !! | TAAGAGTATTGTGGAGAGTC+AGG | + | chr5_3:45149982-45150001 | Msa0813860:CDS | 40.0% |
| TTCGGAAGAGTGATGAGTTT+AGG | + | chr5_3:45150086-45150105 | Msa0813860:CDS | 40.0% | |
| TCGGAAGAGTGATGAGTTTA+GGG | + | chr5_3:45150087-45150106 | Msa0813860:CDS | 40.0% | |
| !! | TGAGTTTAGGGTGTTTTTGC+AGG | + | chr5_3:45150099-45150118 | Msa0813860:CDS | 40.0% |
| TAAGGAGTTGAAGCAGTCTA+TGG | + | chr5_3:45150279-45150298 | Msa0813860:CDS | 40.0% | |
| TTATCTTCCTCGACAACAAG+CGG | - | chr5_3:45150328-45150347 | None:intergenic | 40.0% | |
| TTTATACCTGCGAGACTGTT+TGG | + | chr5_3:45150464-45150483 | Msa0813860:intron | 40.0% | |
| TTATACCTGCGAGACTGTTT+GGG | + | chr5_3:45150465-45150484 | Msa0813860:intron | 40.0% | |
| GTGACAAGCTATCAAACACA+TGG | - | chr5_3:45150657-45150676 | None:intergenic | 40.0% | |
| ! | ATCACGAGACAATTTTGTGC+AGG | + | chr5_3:45150739-45150758 | Msa0813860:intron | 40.0% |
| ! | TTCTCAGACTGTGAAGCATT+TGG | + | chr5_3:45150949-45150968 | Msa0813860:CDS | 40.0% |
| TGTAAGAACATGCCAAGCTA+TGG | - | chr5_3:45151044-45151063 | None:intergenic | 40.0% | |
| AGCTTGGCATGTTCTTACAA+AGG | + | chr5_3:45151045-45151064 | Msa0813860:intron | 40.0% | |
| ! | TAACGGGCAATCCACTAAAT+AGG | + | chr5_3:45151088-45151107 | Msa0813860:intron | 40.0% |
| TATTTGGGGGTGACAAATCA+AGG | + | chr5_3:45151299-45151318 | Msa0813860:CDS | 40.0% | |
| ! | ATGACCAATCATGGGAGTAT+AGG | - | chr5_3:45151587-45151606 | None:intergenic | 40.0% |
| !! | AGTCTTATTGTTTGTGGGCT+TGG | + | chr5_3:45151805-45151824 | Msa0813860:intron | 40.0% |
| GTCAGGGAAGAAAAGAGAAA+AGG | - | chr5_3:45151957-45151976 | None:intergenic | 40.0% | |
| AAAAAAGAGAAAGGAGACCC+TGG | - | chr5_3:45152013-45152032 | None:intergenic | 40.0% | |
| AAGTTTGGGAATCAGTTCAG+AGG | + | chr5_3:45152162-45152181 | Msa0813860:intron | 40.0% | |
| TCAACCTTTCACTTCAAAGG+TGG | - | chr5_3:45152194-45152213 | None:intergenic | 40.0% | |
| !! | TTGTTTGAAAACTCGGTGTC+CGG | + | chr5_3:45152292-45152311 | Msa0813860:intron | 40.0% |
| ATCGGACTCATCAGATTAGT+CGG | - | chr5_3:45152326-45152345 | None:intergenic | 40.0% | |
| TGGATTTAGCCCACTGAAAT+TGG | + | chr5_3:45152391-45152410 | Msa0813860:intron | 40.0% | |
| TTTATAGGGTCCAGACCTTT+AGG | + | chr5_3:45152739-45152758 | Msa0813860:intron | 40.0% | |
| AACTAGAGCAAATCCCAAGT+TGG | - | chr5_3:45152891-45152910 | None:intergenic | 40.0% | |
| TCTGGTTATTTGGTTAGAGG+TGG | + | chr5_3:45153142-45153161 | Msa0813860:intron | 40.0% | |
| CTGGTTATTTGGTTAGAGGT+GGG | + | chr5_3:45153143-45153162 | Msa0813860:intron | 40.0% | |
| GAGATAGAACCCAAGATTTG+TGG | + | chr5_3:45153230-45153249 | Msa0813860:intron | 40.0% | |
| AACCCAAGATTTGTGGTTCA+GGG | + | chr5_3:45153237-45153256 | Msa0813860:intron | 40.0% | |
| TGTTATCTGCTCATGTTTGC+TGG | + | chr5_3:45153300-45153319 | Msa0813860:intron | 40.0% | |
| ! | GTTATAGCGTTGAGACGTTT+AGG | + | chr5_3:45153484-45153503 | Msa0813860:intron | 40.0% |
| GTTGAGACGTTTAGGTATAG+AGG | + | chr5_3:45153492-45153511 | Msa0813860:intron | 40.0% | |
| CAAGAGAATCAGGAAAAGAG+GGG | - | chr5_3:45153799-45153818 | None:intergenic | 40.0% | |
| GCAAGAGAATCAGGAAAAGA+GGG | - | chr5_3:45153800-45153819 | None:intergenic | 40.0% | |
| TGCAAGAGAATCAGGAAAAG+AGG | - | chr5_3:45153801-45153820 | None:intergenic | 40.0% | |
| TGCACTTCTTGTCTTCTGTT+CGG | + | chr5_3:45154078-45154097 | Msa0813860:intron | 40.0% | |
| !! | GGTCAGGAACCTACTTTTAA+TGG | + | chr5_3:45154099-45154118 | Msa0813860:intron | 40.0% |
| ! | GTCTTTCATGCATTCTGGTT+TGG | + | chr5_3:45154180-45154199 | Msa0813860:intron | 40.0% |
| AAACATCTACCAGAAATGCC+AGG | - | chr5_3:45154255-45154274 | None:intergenic | 40.0% | |
| !! | TGGCATTTCTGGTAGATGTT+TGG | + | chr5_3:45154254-45154273 | Msa0813860:intron | 40.0% |
| CAGAGGAAATAGACAAGAAG+GGG | - | chr5_3:45154332-45154351 | None:intergenic | 40.0% | |
| ! | AATGATGATGATGCCAATGC+AGG | + | chr5_3:45154367-45154386 | Msa0813860:intron | 40.0% |
| TGCCAATGCAGGAAAACAAT+AGG | + | chr5_3:45154378-45154397 | Msa0813860:intron | 40.0% | |
| ! | CTCCTATTGTTTTCCTGCAT+TGG | - | chr5_3:45154383-45154402 | None:intergenic | 40.0% |
| ACAATAGGAGTGAACTTGGA+AGG | + | chr5_3:45154393-45154412 | Msa0813860:CDS | 40.0% | |
| TGACTCTTGCATCTTTCACA+AGG | + | chr5_3:45154943-45154962 | Msa0813860:three_prime_UTR | 40.0% | |
| AGGGTGAAAATGTTCCTCTG+TGG | - | chr5_3:45149384-45149403 | None:intergenic | 45.0% | |
| ATTGTGAGAATCAGAGAGCG+TGG | - | chr5_3:45149510-45149529 | None:intergenic | 45.0% | |
| AAAAGTGGATCGGAATCCAC+CGG | - | chr5_3:45149572-45149591 | None:intergenic | 45.0% | |
| !!! | TAGGGTTTTGAAATTCGCGG+TGG | - | chr5_3:45149610-45149629 | None:intergenic | 45.0% |
| CGTCTGCGTTAGGTGAATTA+GGG | - | chr5_3:45149628-45149647 | None:intergenic | 45.0% | |
| GTGAAAATTGCGTCTGCGTT+AGG | - | chr5_3:45149638-45149657 | None:intergenic | 45.0% | |
| GACGGTGAATCATCTTCCAA+CGG | + | chr5_3:45149665-45149684 | Msa0813860:CDS | 45.0% | |
| ! | TGTCGGAGTATTAACACCGT+TGG | - | chr5_3:45149684-45149703 | None:intergenic | 45.0% |
| TACGGTTTCGAATCCGGTTA+AGG | + | chr5_3:45149769-45149788 | Msa0813860:CDS | 45.0% | |
| TACGACCAGGACGAATTTAC+CGG | + | chr5_3:45149850-45149869 | Msa0813860:CDS | 45.0% | |
| !! | GAGGGAACGAATTTGGTGTT+CGG | + | chr5_3:45149879-45149898 | Msa0813860:CDS | 45.0% |
| !! | ACGAATTTGGTGTTCGGAGA+AGG | + | chr5_3:45149885-45149904 | Msa0813860:CDS | 45.0% |
| ACTTTCTGATCGGTTATCGG+AGG | + | chr5_3:45149925-45149944 | Msa0813860:CDS | 45.0% | |
| !!! | GCGGTTTTTTTATACCGCCT+AGG | + | chr5_3:45149954-45149973 | Msa0813860:CDS | 45.0% |
| ACAATACTCTTATCCGGCCT+AGG | - | chr5_3:45149974-45149993 | None:intergenic | 45.0% | |
| !! | TAGGCCGGATAAGAGTATTG+TGG | + | chr5_3:45149973-45149992 | Msa0813860:CDS | 45.0% |
| TCATCACTCTTCCGAATCAC+CGG | - | chr5_3:45150082-45150101 | None:intergenic | 45.0% | |
| !! | AGGGTGTTTTTGCAGGTTCA+AGG | + | chr5_3:45150106-45150125 | Msa0813860:CDS | 45.0% |
| !! | GGGTGTTTTTGCAGGTTCAA+GGG | + | chr5_3:45150107-45150126 | Msa0813860:CDS | 45.0% |
| ! | GAGTGTTATTGCTCCTAGTG+AGG | + | chr5_3:45150213-45150232 | Msa0813860:CDS | 45.0% |
| AGCAGTCTATGGCGAATGAT+TGG | + | chr5_3:45150290-45150309 | Msa0813860:CDS | 45.0% | |
| GCAGTCTATGGCGAATGATT+GGG | + | chr5_3:45150291-45150310 | Msa0813860:CDS | 45.0% | |
| CAGTCTATGGCGAATGATTG+GGG | + | chr5_3:45150292-45150311 | Msa0813860:CDS | 45.0% | |
| !! | GCTTGTTGTCGAGGAAGATA+AGG | + | chr5_3:45150327-45150346 | Msa0813860:CDS | 45.0% |
| AATCAATGGTGCTTCTCAGC+AGG | + | chr5_3:45150393-45150412 | Msa0813860:intron | 45.0% | |
| CAAGATATGGGAGAGACGAT+GGG | + | chr5_3:45150785-45150804 | Msa0813860:CDS | 45.0% | |
| GAGAGACGATGGGTGAATTA+GGG | + | chr5_3:45150795-45150814 | Msa0813860:CDS | 45.0% | |
| ! | AAGCTGTTTCGGAATCTCAG+AGG | + | chr5_3:45150855-45150874 | Msa0813860:CDS | 45.0% |
| ! | AGCTGTTTCGGAATCTCAGA+GGG | + | chr5_3:45150856-45150875 | Msa0813860:CDS | 45.0% |
| GTACGAGCTACTGACATGAA+AGG | + | chr5_3:45150878-45150897 | Msa0813860:CDS | 45.0% | |
| ATCAAGGACTCGGAAGTTAG+AGG | + | chr5_3:45151315-45151334 | Msa0813860:CDS | 45.0% | |
| CAGAGAATATGAGCGGATCA+AGG | + | chr5_3:45151387-45151406 | Msa0813860:CDS | 45.0% | |
| ATATGAGCGGATCAAGGTAG+AGG | + | chr5_3:45151393-45151412 | Msa0813860:intron | 45.0% | |
| GTGTCCTATACTCCCATGAT+TGG | + | chr5_3:45151580-45151599 | Msa0813860:intron | 45.0% | |
| !! | ATGGCCACCTTTGAAGTGAA+AGG | + | chr5_3:45152187-45152206 | Msa0813860:intron | 45.0% |
| ! | CATCAGATTAGTCGGTCCTT+GGG | - | chr5_3:45152318-45152337 | None:intergenic | 45.0% |
| ! | TCATCAGATTAGTCGGTCCT+TGG | - | chr5_3:45152319-45152338 | None:intergenic | 45.0% |
| TGGCCTAAAGGTCTTGGTTT+GGG | - | chr5_3:45152466-45152485 | None:intergenic | 45.0% | |
| TTGGCCTAAAGGTCTTGGTT+TGG | - | chr5_3:45152467-45152486 | None:intergenic | 45.0% | |
| ACCTTTAGGCCAACCCTAAT+GGG | + | chr5_3:45152474-45152493 | Msa0813860:intron | 45.0% | |
| !! | TCCAGACCTTTAGGTGTTGA+GGG | + | chr5_3:45152748-45152767 | Msa0813860:intron | 45.0% |
| !! | ATGCTTCTGCCTAGCTTGTT+TGG | + | chr5_3:45152929-45152948 | Msa0813860:intron | 45.0% |
| ! | ACGTTGCTACTTGAAGACTG+TGG | + | chr5_3:45153032-45153051 | Msa0813860:intron | 45.0% |
| ! | TACTTGAAGACTGTGGACTG+TGG | + | chr5_3:45153039-45153058 | Msa0813860:intron | 45.0% |
| AAGGACCTTACTCAGTGTTC+TGG | + | chr5_3:45153124-45153143 | Msa0813860:intron | 45.0% | |
| CACGTCACGAGTAGATGAAA+TGG | - | chr5_3:45153203-45153222 | None:intergenic | 45.0% | |
| GAACCCAAGATTTGTGGTTC+AGG | + | chr5_3:45153236-45153255 | Msa0813860:intron | 45.0% | |
| ACCCAAGATTTGTGGTTCAG+GGG | + | chr5_3:45153238-45153257 | Msa0813860:intron | 45.0% | |
| TACGAGGTTCCAAAGGTCTT+TGG | + | chr5_3:45153264-45153283 | Msa0813860:intron | 45.0% | |
| ! | CCTTTCTAGCCAAAGACCTT+TGG | - | chr5_3:45153276-45153295 | None:intergenic | 45.0% |
| CCAAAGGTCTTTGGCTAGAA+AGG | + | chr5_3:45153273-45153292 | Msa0813860:intron | 45.0% | |
| ACAACTAAAGCTTACAGGGG+AGG | + | chr5_3:45153335-45153354 | Msa0813860:intron | 45.0% | |
| AGACGTTTAGGTATAGAGGC+AGG | + | chr5_3:45153496-45153515 | Msa0813860:intron | 45.0% | |
| TTCTTGTCTTCTGTTCGGTC+AGG | + | chr5_3:45154083-45154102 | Msa0813860:intron | 45.0% | |
| TTGGAAGGCTTGATAGAGAG+AGG | + | chr5_3:45154408-45154427 | Msa0813860:CDS | 45.0% | |
| GATGTGTTTGGCTGCTTCAT+AGG | + | chr5_3:45154836-45154855 | Msa0813860:three_prime_UTR | 45.0% | |
| CGGCGGAGATAAAAGTGGAT+CGG | - | chr5_3:45149582-45149601 | None:intergenic | 50.0% | |
| GCGTCTGCGTTAGGTGAATT+AGG | - | chr5_3:45149629-45149648 | None:intergenic | 50.0% | |
| GGAAGATGATTCACCGTCGA+AGG | - | chr5_3:45149663-45149682 | None:intergenic | 50.0% | |
| CCATCGGAGAAACTTCGTGT+CGG | - | chr5_3:45149701-45149720 | None:intergenic | 50.0% | |
| ACACGAAGTTTCTCCGATGG+AGG | + | chr5_3:45149701-45149720 | Msa0813860:CDS | 50.0% | |
| ATACTCTTATCCGGCCTAGG+CGG | - | chr5_3:45149971-45149990 | None:intergenic | 50.0% | |
| !! | AGCAGGAGTTTGTTGAGCAG+AGG | + | chr5_3:45150014-45150033 | Msa0813860:CDS | 50.0% |
| ! | GTTTGTTGAGCAGAGGAGAG+TGG | + | chr5_3:45150021-45150040 | Msa0813860:CDS | 50.0% |
| AAGCTGCCGAAGCAGTTGAT+GGG | + | chr5_3:45150187-45150206 | Msa0813860:CDS | 50.0% | |
| TCCTAGTGAGGTTGTGCAAC+CGG | + | chr5_3:45150225-45150244 | Msa0813860:CDS | 50.0% | |
| !! | AAGGTGGGAGGGATTTGTTG+AGG | + | chr5_3:45150251-45150270 | Msa0813860:CDS | 50.0% |
| TCTATGGCGAATGATTGGGG+TGG | + | chr5_3:45150295-45150314 | Msa0813860:CDS | 50.0% | |
| !! | TTCTAAGCCGCTTGTTGTCG+AGG | + | chr5_3:45150318-45150337 | Msa0813860:CDS | 50.0% |
| GCAAGATATGGGAGAGACGA+TGG | + | chr5_3:45150784-45150803 | Msa0813860:CDS | 50.0% | |
| GGAGAGACGATGGGTGAATT+AGG | + | chr5_3:45150794-45150813 | Msa0813860:CDS | 50.0% | |
| GACGATGGGTGAATTAGGGT+TGG | + | chr5_3:45150799-45150818 | Msa0813860:CDS | 50.0% | |
| GGGGTGACAAATCAAGGACT+CGG | + | chr5_3:45151305-45151324 | Msa0813860:CDS | 50.0% | |
| TCGGAAGTTAGAGGAGCTAC+AGG | + | chr5_3:45151324-45151343 | Msa0813860:CDS | 50.0% | |
| GGCATCTTCAGTGGCTCTTA+TGG | - | chr5_3:45151353-45151372 | None:intergenic | 50.0% | |
| GGGAATCAGTTCAGAGGTCA+TGG | + | chr5_3:45152168-45152187 | Msa0813860:intron | 50.0% | |
| TCATCTGCTTGGGATGTGTG+TGG | + | chr5_3:45152231-45152250 | Msa0813860:intron | 50.0% | |
| CTTGGAGTGTGCTCATCTCA+AGG | - | chr5_3:45152441-45152460 | None:intergenic | 50.0% | |
| CTTGAGATGAGCACACTCCA+AGG | + | chr5_3:45152439-45152458 | Msa0813860:intron | 50.0% | |
| !! | AAGGTCTTGGTTTGGGACCT+TGG | - | chr5_3:45152459-45152478 | None:intergenic | 50.0% |
| GGTCCCAAACCAAGACCTTT+AGG | + | chr5_3:45152460-45152479 | Msa0813860:intron | 50.0% | |
| !! | TAGGGTTGGCCTAAAGGTCT+TGG | - | chr5_3:45152472-45152491 | None:intergenic | 50.0% |
| GACCTTTAGGCCAACCCTAA+TGG | + | chr5_3:45152473-45152492 | Msa0813860:intron | 50.0% | |
| !! | ACCCATTAGGGTTGGCCTAA+AGG | - | chr5_3:45152478-45152497 | None:intergenic | 50.0% |
| CCATAGGTACCCATTAGGGT+TGG | - | chr5_3:45152486-45152505 | None:intergenic | 50.0% | |
| ! | CCAACCCTAATGGGTACCTA+TGG | + | chr5_3:45152483-45152502 | Msa0813860:intron | 50.0% |
| ! | GTCCAGACCTTTAGGTGTTG+AGG | + | chr5_3:45152747-45152766 | Msa0813860:intron | 50.0% |
| TCCCTCAACACCTAAAGGTC+TGG | - | chr5_3:45152752-45152771 | None:intergenic | 50.0% | |
| !! | AGACCTTTAGGTGTTGAGGG+AGG | + | chr5_3:45152751-45152770 | Msa0813860:intron | 50.0% |
| TGTCCTCCCTCAACACCTAA+AGG | - | chr5_3:45152757-45152776 | None:intergenic | 50.0% | |
| !! | TTTCCCTCCCTTTTTGGCCA+AGG | + | chr5_3:45152828-45152847 | Msa0813860:intron | 50.0% |
| !! | TTCCCTCCCTTTTTGGCCAA+GGG | + | chr5_3:45152829-45152848 | Msa0813860:intron | 50.0% |
| AGAAGGCCCTTGGCCAAAAA+GGG | - | chr5_3:45152838-45152857 | None:intergenic | 50.0% | |
| AAAGAGAGAGAGAAGGCCCT+TGG | - | chr5_3:45152848-45152867 | None:intergenic | 50.0% | |
| GGTCGTGCAAAGATGCAGTA+AGG | - | chr5_3:45152989-45153008 | None:intergenic | 50.0% | |
| GCATCTTTGCACGACCTGTT+TGG | + | chr5_3:45152993-45153012 | Msa0813860:intron | 50.0% | |
| TCATCTACTCGTGACGTGTG+TGG | + | chr5_3:45153205-45153224 | Msa0813860:intron | 50.0% | |
| CCCCCTGAACCACAAATCTT+GGG | - | chr5_3:45153242-45153261 | None:intergenic | 50.0% | |
| CCCAAGATTTGTGGTTCAGG+GGG | + | chr5_3:45153239-45153258 | Msa0813860:intron | 50.0% | |
| TCCCCCTGAACCACAAATCT+TGG | - | chr5_3:45153243-45153262 | None:intergenic | 50.0% | |
| AGGTCTTTGGCTAGAAAGGC+TGG | + | chr5_3:45153277-45153296 | Msa0813860:intron | 50.0% | |
| GATGCAGCAGACAGAACACT+AGG | - | chr5_3:45154006-45154025 | None:intergenic | 50.0% | |
| AAGGCTTGATAGAGAGAGGC+AGG | + | chr5_3:45154412-45154431 | Msa0813860:CDS | 50.0% | |
| AGGCTTGATAGAGAGAGGCA+GGG | + | chr5_3:45154413-45154432 | Msa0813860:CDS | 50.0% | |
| ATCGCCGAGCTTCGTTTCAC+CGG | + | chr5_3:45149550-45149569 | Msa0813860:CDS | 55.0% | |
| TCCACCGGTGAAACGAAGCT+CGG | - | chr5_3:45149557-45149576 | None:intergenic | 55.0% | |
| TGCTGCGGCGGAGATAAAAG+TGG | - | chr5_3:45149587-45149606 | None:intergenic | 55.0% | |
| ! | TGAAATTCGCGGTGGTGCTG+CGG | - | chr5_3:45149602-45149621 | None:intergenic | 55.0% |
| CCGACACGAAGTTTCTCCGA+TGG | + | chr5_3:45149698-45149717 | Msa0813860:CDS | 55.0% | |
| GAGTCAGGTGATGCAGAAGC+AGG | + | chr5_3:45149997-45150016 | Msa0813860:CDS | 55.0% | |
| TGAGCAGAGGAGAGTGGCAT+TGG | + | chr5_3:45150027-45150046 | Msa0813860:CDS | 55.0% | |
| ! | GAGGAGATTGGCGGATCATC+CGG | + | chr5_3:45150060-45150079 | Msa0813860:CDS | 55.0% |
| ! | TGGCGGATCATCCGGTGATT+CGG | + | chr5_3:45150068-45150087 | Msa0813860:CDS | 55.0% |
| GGTTCAAGGGAAGCTTCCGT+TGG | + | chr5_3:45150120-45150139 | Msa0813860:CDS | 55.0% | |
| TCAAGGGAAGCTTCCGTTGG+TGG | + | chr5_3:45150123-45150142 | Msa0813860:CDS | 55.0% | |
| CAAGGGAAGCTTCCGTTGGT+GGG | + | chr5_3:45150124-45150143 | Msa0813860:CDS | 55.0% | |
| ACATCCGTCGAACCCACCAA+CGG | - | chr5_3:45150139-45150158 | None:intergenic | 55.0% | |
| TTCGACGGATGTGGCTTCGA+GGG | + | chr5_3:45150147-45150166 | Msa0813860:CDS | 55.0% | |
| ! | GGATGTGGCTTCGAGGGTTT+TGG | + | chr5_3:45150153-45150172 | Msa0813860:CDS | 55.0% |
| !!! | GTGGCTTCGAGGGTTTTGGA+TGG | + | chr5_3:45150157-45150176 | Msa0813860:CDS | 55.0% |
| !!! | TTCGAGGGTTTTGGATGGCG+CGG | + | chr5_3:45150162-45150181 | Msa0813860:CDS | 55.0% |
| GAAGCTGCCGAAGCAGTTGA+TGG | + | chr5_3:45150186-45150205 | Msa0813860:CDS | 55.0% | |
| ! | AGCTGCCGAAGCAGTTGATG+GGG | + | chr5_3:45150188-45150207 | Msa0813860:CDS | 55.0% |
| CTCTCCCCCATCAACTGCTT+CGG | - | chr5_3:45150196-45150215 | None:intergenic | 55.0% | |
| TTGTGCAACCGGCGAAAGGT+GGG | + | chr5_3:45150236-45150255 | Msa0813860:CDS | 55.0% | |
| AAATCCCTCCCACCTTTCGC+CGG | - | chr5_3:45150247-45150266 | None:intergenic | 55.0% | |
| ACTCTCCCAAACAGTCTCGC+AGG | - | chr5_3:45150473-45150492 | None:intergenic | 55.0% | |
| ! | AGATTAGTCGGTCCTTGGGC+CGG | - | chr5_3:45152314-45152333 | None:intergenic | 55.0% |
| TTAAATGGGACCCCCGCAAG+TGG | - | chr5_3:45152357-45152376 | None:intergenic | 55.0% | |
| AGCCCACTGAAATTGGCACC+AGG | + | chr5_3:45152398-45152417 | Msa0813860:intron | 55.0% | |
| GCCCACTGAAATTGGCACCA+GGG | + | chr5_3:45152399-45152418 | Msa0813860:intron | 55.0% | |
| ! | CCCCTGGTGCCAATTTCAGT+GGG | - | chr5_3:45152403-45152422 | None:intergenic | 55.0% |
| CCCACTGAAATTGGCACCAG+GGG | + | chr5_3:45152400-45152419 | Msa0813860:intron | 55.0% | |
| CCACTGAAATTGGCACCAGG+GGG | + | chr5_3:45152401-45152420 | Msa0813860:intron | 55.0% | |
| CACTGAAATTGGCACCAGGG+GGG | + | chr5_3:45152402-45152421 | Msa0813860:intron | 55.0% | |
| GAGAAGGCCCTTGGCCAAAA+AGG | - | chr5_3:45152839-45152858 | None:intergenic | 55.0% | |
| GAACGGCGTCCAAACAAGCT+AGG | - | chr5_3:45152941-45152960 | None:intergenic | 55.0% | |
| TGTGGTTCAGGGGGATTACG+AGG | + | chr5_3:45153248-45153267 | Msa0813860:intron | 55.0% | |
| GGGGGATTACGAGGTTCCAA+AGG | + | chr5_3:45153257-45153276 | Msa0813860:intron | 55.0% | |
| AGAGCGTGGACATCACGCTC+CGG | - | chr5_3:45149496-45149515 | None:intergenic | 60.0% | |
| CGAAGCTCGGCGATGAGAGA+GGG | - | chr5_3:45149544-45149563 | None:intergenic | 60.0% | |
| ACGAAGCTCGGCGATGAGAG+AGG | - | chr5_3:45149545-45149564 | None:intergenic | 60.0% | |
| ! | CGGTTATCGGAGGCGTATCG+CGG | + | chr5_3:45149935-45149954 | Msa0813860:CDS | 60.0% |
| !! | GCTTCCGTTGGTGGGTTCGA+CGG | + | chr5_3:45150132-45150151 | Msa0813860:CDS | 60.0% |
| !! | GTTGGTGGGTTCGACGGATG+TGG | + | chr5_3:45150138-45150157 | Msa0813860:CDS | 60.0% |
| GTTCGACGGATGTGGCTTCG+AGG | + | chr5_3:45150146-45150165 | Msa0813860:CDS | 60.0% | |
| !! | GCTGCCGAAGCAGTTGATGG+GGG | + | chr5_3:45150189-45150208 | Msa0813860:CDS | 60.0% |
| GCCGGTTGCACAACCTCACT+AGG | - | chr5_3:45150229-45150248 | None:intergenic | 60.0% | |
| GAGGTTGTGCAACCGGCGAA+AGG | + | chr5_3:45150232-45150251 | Msa0813860:CDS | 60.0% | |
| GTTGTGCAACCGGCGAAAGG+TGG | + | chr5_3:45150235-45150254 | Msa0813860:CDS | 60.0% | |
| !! | AAAACTCGGTGTCCGGCCCA+AGG | + | chr5_3:45152299-45152318 | Msa0813860:intron | 60.0% |
| CCGCAAGTGGACGGTGGAAT+CGG | - | chr5_3:45152344-45152363 | None:intergenic | 60.0% | |
| CCGATTCCACCGTCCACTTG+CGG | + | chr5_3:45152341-45152360 | Msa0813860:intron | 60.0% | |
| CGATTCCACCGTCCACTTGC+GGG | + | chr5_3:45152342-45152361 | Msa0813860:intron | 60.0% | |
| GATTCCACCGTCCACTTGCG+GGG | + | chr5_3:45152343-45152362 | Msa0813860:intron | 60.0% | |
| ATTCCACCGTCCACTTGCGG+GGG | + | chr5_3:45152344-45152363 | Msa0813860:intron | 60.0% | |
| ! | CCCCCTGGTGCCAATTTCAG+TGG | - | chr5_3:45152404-45152423 | None:intergenic | 60.0% |
| GTCTCGTGTTTGATCCCCCC+TGG | - | chr5_3:45152419-45152438 | None:intergenic | 60.0% | |
| GGCCCTTGGCCAAAAAGGGA+GGG | - | chr5_3:45152834-45152853 | None:intergenic | 60.0% | |
| AGGCCCTTGGCCAAAAAGGG+AGG | - | chr5_3:45152835-45152854 | None:intergenic | 60.0% | |
| AGCTCGGCGATGAGAGAGGG+TGG | - | chr5_3:45149541-45149560 | None:intergenic | 65.0% | |
| GCCGAGCTTCGTTTCACCGG+TGG | + | chr5_3:45149553-45149572 | Msa0813860:CDS | 65.0% | |
| !! | AATTCGCGGTGGTGCTGCGG+CGG | - | chr5_3:45149599-45149618 | None:intergenic | 65.0% |
| TGCAACCGGCGAAAGGTGGG+AGG | + | chr5_3:45150239-45150258 | Msa0813860:CDS | 65.0% | |
| GCAACCGGCGAAAGGTGGGA+GGG | + | chr5_3:45150240-45150259 | Msa0813860:CDS | 65.0% | |
| ATGGGACCCCCGCAAGTGGA+CGG | - | chr5_3:45152353-45152372 | None:intergenic | 65.0% | |
| GGACCCCCGCAAGTGGACGG+TGG | - | chr5_3:45152350-45152369 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 45149356 | 45155073 | 45149356 | ID=Msa0813860;Name=Msa0813860 |
| chr5_3 | mRNA | 45149356 | 45155073 | 45149356 | ID=Msa0813860-mRNA-1;Parent=Msa0813860;Name=Msa0813860-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.75|0.8|1|1|1|5|322|551 |
| chr5_3 | exon | 45149356 | 45150372 | 45149356 | ID=Msa0813860-mRNA-1:exon:13848;Parent=Msa0813860-mRNA-1 |
| chr5_3 | exon | 45150761 | 45150970 | 45150761 | ID=Msa0813860-mRNA-1:exon:13849;Parent=Msa0813860-mRNA-1 |
| chr5_3 | exon | 45151148 | 45151408 | 45151148 | ID=Msa0813860-mRNA-1:exon:13850;Parent=Msa0813860-mRNA-1 |
| chr5_3 | exon | 45154389 | 45154475 | 45154389 | ID=Msa0813860-mRNA-1:exon:13851;Parent=Msa0813860-mRNA-1 |
| chr5_3 | exon | 45154671 | 45155073 | 45154671 | ID=Msa0813860-mRNA-1:exon:13852;Parent=Msa0813860-mRNA-1 |
| chr5_3 | CDS | 45149356 | 45150372 | 45149356 | ID=Msa0813860-mRNA-1:cds;Parent=Msa0813860-mRNA-1 |
| chr5_3 | CDS | 45150761 | 45150970 | 45150761 | ID=Msa0813860-mRNA-1:cds;Parent=Msa0813860-mRNA-1 |
| chr5_3 | CDS | 45151148 | 45151408 | 45151148 | ID=Msa0813860-mRNA-1:cds;Parent=Msa0813860-mRNA-1 |
| chr5_3 | CDS | 45154389 | 45154475 | 45154389 | ID=Msa0813860-mRNA-1:cds;Parent=Msa0813860-mRNA-1 |
| chr5_3 | CDS | 45154671 | 45154751 | 45154671 | ID=Msa0813860-mRNA-1:cds;Parent=Msa0813860-mRNA-1 |
| chr5_3 | three_prime_UTR | 45154752 | 45155073 | 45154752 | ID=Msa0813860-mRNA-1:three_prime_utr;Parent=Msa0813860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
