Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087480 | XP_003624717.1 | 76.238 | 101 | 12 | 1 | 3 | 103 | 126 | 214 | 6.73e-38 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087480 | sp|Q9SYG9|CCX4_ARATH | 61.972 | 71 | 27 | 0 | 3 | 73 | 156 | 226 | 2.64e-22 | 95.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087480 | G7L1K1 | 76.238 | 101 | 12 | 1 | 3 | 103 | 126 | 214 | 3.22e-38 | 146 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1087480 | 0.818693 | 1.715814e-52 | -8.615850e-47 |
| Msa0038870 | Msa1087480 | 0.803545 | 3.312352e-49 | -8.615850e-47 |
| Msa0069330 | Msa1087480 | 0.809126 | 2.207451e-50 | -8.615850e-47 |
| Msa0091610 | Msa1087480 | 0.806981 | 6.316784e-50 | -8.615850e-47 |
| Msa0097840 | Msa1087480 | 0.800762 | 1.238071e-48 | -8.615850e-47 |
| Msa0104550 | Msa1087480 | 0.816195 | 6.267206e-52 | -8.615850e-47 |
| Msa0642970 | Msa1087480 | 0.817383 | 3.393498e-52 | -8.615850e-47 |
| Msa0643890 | Msa1087480 | 0.807223 | 5.614353e-50 | -8.615850e-47 |
| Msa0682680 | Msa1087480 | 0.804372 | 2.229411e-49 | -8.615850e-47 |
| Msa0683730 | Msa1087480 | 0.814968 | 1.175981e-51 | -8.615850e-47 |
| Msa0687020 | Msa1087480 | 0.807880 | 4.071511e-50 | -8.615850e-47 |
| Msa0721280 | Msa1087480 | 0.810926 | 9.042298e-51 | -8.615850e-47 |
| Msa0731270 | Msa1087480 | 0.809541 | 1.797867e-50 | -8.615850e-47 |
| Msa0748920 | Msa1087480 | 0.813161 | 2.944066e-51 | -8.615850e-47 |
| Msa0771280 | Msa1087480 | 0.808008 | 3.824738e-50 | -8.615850e-47 |
| Msa0813860 | Msa1087480 | 0.809335 | 1.991161e-50 | -8.615850e-47 |
| Msa0830880 | Msa1087480 | 0.825096 | 5.648638e-54 | -8.615850e-47 |
| Msa0832040 | Msa1087480 | 0.819754 | 9.837516e-53 | -8.615850e-47 |
| Msa0835280 | Msa1087480 | 0.803250 | 3.812269e-49 | -8.615850e-47 |
| Msa0180500 | Msa1087480 | 0.806820 | 6.832047e-50 | -8.615850e-47 |
| Msa0206690 | Msa1087480 | 0.805772 | 1.135764e-49 | -8.615850e-47 |
| Msa0209500 | Msa1087480 | 0.804784 | 1.829146e-49 | -8.615850e-47 |
| Msa0382370 | Msa1087480 | 0.811762 | 5.951639e-51 | -8.615850e-47 |
| Msa0453350 | Msa1087480 | 0.817505 | 3.185615e-52 | -8.615850e-47 |
| Msa0997970 | Msa1087480 | 0.811920 | 5.500617e-51 | -8.615850e-47 |
| Msa1037520 | Msa1087480 | 0.804762 | 1.848746e-49 | -8.615850e-47 |
| Msa1068870 | Msa1087480 | 0.803254 | 3.806351e-49 | -8.615850e-47 |
| Msa1072900 | Msa1087480 | 0.800782 | 1.225993e-48 | -8.615850e-47 |
| Msa1078420 | Msa1087480 | 0.811855 | 5.680309e-51 | -8.615850e-47 |
| Msa1087480 | Msa1137570 | 0.806454 | 8.163325e-50 | -8.615850e-47 |
| Msa1087480 | Msa1168550 | 0.800266 | 1.562107e-48 | -8.615850e-47 |
| Msa1087480 | Msa1168580 | 0.808082 | 3.687989e-50 | -8.615850e-47 |
| Msa1087480 | Msa1169530 | 0.818616 | 1.785831e-52 | -8.615850e-47 |
| Msa1087480 | Msa1169550 | 0.819922 | 9.004173e-53 | -8.615850e-47 |
| Msa1087480 | Msa1204830 | 0.828453 | 8.914278e-55 | -8.615850e-47 |
| Msa1087480 | Msa1204850 | 0.812737 | 3.647117e-51 | -8.615850e-47 |
| Msa1087480 | Msa1232740 | 0.805049 | 1.610250e-49 | -8.615850e-47 |
| Msa1087480 | Msa1253810 | 0.801073 | 1.069501e-48 | -8.615850e-47 |
| Msa1087480 | Msa1256470 | 0.801298 | 9.618093e-49 | -8.615850e-47 |
| Msa1087480 | Msa1265590 | 0.802157 | 6.410792e-49 | -8.615850e-47 |
| Msa1087480 | Msa1266020 | 0.817181 | 3.766934e-52 | -8.615850e-47 |
| Msa1087480 | Msa1286800 | 0.800565 | 1.357598e-48 | -8.615850e-47 |
| Msa1087480 | Msa1313320 | 0.806611 | 7.561581e-50 | -8.615850e-47 |
| Msa1087480 | Msa1357190 | 0.806621 | 7.524575e-50 | -8.615850e-47 |
| Msa1087480 | Msa1357890 | 0.807847 | 4.138135e-50 | -8.615850e-47 |
| Msa1087480 | Msa1362420 | 0.802902 | 4.500978e-49 | -8.615850e-47 |
| Msa1087480 | Msa1367590 | 0.801695 | 7.974978e-49 | -8.615850e-47 |
| Msa1087480 | Msa1376650 | 0.811350 | 7.316743e-51 | -8.615850e-47 |
| Msa1087480 | Msa1390700 | 0.805682 | 1.186172e-49 | -8.615850e-47 |
| Msa1087480 | Msa1392910 | 0.800218 | 1.598082e-48 | -8.615850e-47 |
| Msa1087480 | Msa1398090 | 0.818547 | 1.851397e-52 | -8.615850e-47 |
| Msa1087480 | Msa1410390 | 0.802395 | 5.725354e-49 | -8.615850e-47 |
| Msa1087480 | Msa1410510 | 0.801427 | 9.051889e-49 | -8.615850e-47 |
| Msa1087480 | Msa1450720 | 0.802943 | 4.413889e-49 | -8.615850e-47 |
| Msa1087480 | Msa1458610 | 0.814811 | 1.273951e-51 | -8.615850e-47 |
| Msa0249580 | Msa1087480 | 0.806880 | 6.634530e-50 | -8.615850e-47 |
| Msa0257490 | Msa1087480 | 0.841922 | 3.541587e-58 | -8.615850e-47 |
| Msa0259210 | Msa1087480 | 0.814631 | 1.396190e-51 | -8.615850e-47 |
| Msa0265340 | Msa1087480 | 0.805145 | 1.537369e-49 | -8.615850e-47 |
| Msa0281530 | Msa1087480 | 0.807741 | 4.358618e-50 | -8.615850e-47 |
| Msa0295080 | Msa1087480 | 0.806111 | 9.641594e-50 | -8.615850e-47 |
| Msa0296790 | Msa1087480 | 0.824644 | 7.219631e-54 | -8.615850e-47 |
| Msa0320590 | Msa1087480 | 0.815211 | 1.038185e-51 | -8.615850e-47 |
| Msa0326480 | Msa1087480 | 0.801150 | 1.031259e-48 | -8.615850e-47 |
| Msa0336320 | Msa1087480 | 0.817642 | 2.965639e-52 | -8.615850e-47 |
| Msa0343850 | Msa1087480 | 0.829663 | 4.539471e-55 | -8.615850e-47 |
| Msa0484740 | Msa1087480 | 0.800230 | 1.589055e-48 | -8.615850e-47 |
| Msa0524500 | Msa1087480 | 0.821981 | 3.023873e-53 | -8.615850e-47 |
| Msa0534050 | Msa1087480 | 0.800446 | 1.435912e-48 | -8.615850e-47 |
| Msa0542290 | Msa1087480 | 0.811419 | 7.067591e-51 | -8.615850e-47 |
| Msa0546540 | Msa1087480 | 0.809645 | 1.707722e-50 | -8.615850e-47 |
| Msa0547160 | Msa1087480 | 0.816347 | 5.795765e-52 | -8.615850e-47 |
| Msa0547990 | Msa1087480 | 0.810618 | 1.053751e-50 | -8.615850e-47 |
| Msa0556060 | Msa1087480 | 0.801786 | 7.640713e-49 | -8.615850e-47 |
| Msa0601530 | Msa1087480 | 0.804651 | 1.950237e-49 | -8.615850e-47 |
| Msa0844420 | Msa1087480 | 0.803393 | 3.560805e-49 | -8.615850e-47 |
| Msa0898040 | Msa1087480 | 0.813701 | 2.240316e-51 | -8.615850e-47 |
| Msa0901110 | Msa1087480 | 0.805243 | 1.466351e-49 | -8.615850e-47 |
| Msa0903780 | Msa1087480 | 0.814770 | 1.300791e-51 | -8.615850e-47 |
| Msa0924470 | Msa1087480 | 0.812132 | 4.943817e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087480 | MtrunA17_Chr6g0460821 | 73.611 | 72 | 19 | 0 | 2 | 73 | 122 | 193 | 1.21e-28 | 110 |
| Msa1087480 | MtrunA17_Chr6g0460831 | 63.380 | 71 | 26 | 0 | 3 | 73 | 134 | 204 | 1.11e-22 | 93.2 |
| Msa1087480 | MtrunA17_Chr7g0254091 | 100.000 | 44 | 0 | 0 | 3 | 46 | 126 | 169 | 4.62e-22 | 91.3 |
| Msa1087480 | MtrunA17_Chr8g0344371 | 61.290 | 62 | 24 | 0 | 3 | 64 | 163 | 224 | 1.62e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087480 | AT1G54115.1 | 61.972 | 71 | 27 | 0 | 3 | 73 | 156 | 226 | 2.68e-23 | 95.1 |
| Msa1087480 | AT5G17860.1 | 63.380 | 71 | 26 | 0 | 3 | 73 | 121 | 191 | 1.30e-22 | 93.2 |
| Msa1087480 | AT5G17860.2 | 63.380 | 71 | 26 | 0 | 3 | 73 | 121 | 191 | 1.51e-22 | 93.2 |
| Msa1087480 | AT3G14070.1 | 60.563 | 71 | 28 | 0 | 3 | 73 | 157 | 227 | 5.08e-22 | 91.7 |
| Msa1087480 | AT5G17850.1 | 56.311 | 103 | 31 | 3 | 3 | 103 | 111 | 201 | 1.28e-19 | 84.7 |
| Msa1087480 | AT5G17850.2 | 56.311 | 103 | 31 | 3 | 3 | 103 | 111 | 201 | 1.28e-19 | 84.7 |
Find 35 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGATCAATTTGGCCTTA+TGG | 0.174747 | 7_3:-215969 | Msa1087490:CDS |
| TCTGATCAATTTGGCCTTAT+GGG | 0.206934 | 7_3:-215968 | Msa1087490:CDS |
| AACAAGAGTAAGAGTGAAAT+TGG | 0.208263 | 7_3:+216042 | Msa1087480:CDS |
| GAACATTGCTCTGATCAATT+TGG | 0.249003 | 7_3:-215977 | Msa1087490:CDS |
| ATTTCACTCTTACTCTTGTT+GGG | 0.276326 | 7_3:-216039 | Msa1087490:CDS |
| AATTTCACTCTTACTCTTGT+TGG | 0.319682 | 7_3:-216040 | Msa1087490:CDS |
| ATTGGATTCAACACTGTTCT+TGG | 0.331351 | 7_3:+214463 | Msa1087480:CDS |
| GTTGTAGTTGCAAGAGAGTT+TGG | 0.331524 | 7_3:+216082 | Msa1087480:CDS |
| AGGCTTTCACCAACTATTGC+TGG | 0.335790 | 7_3:+214358 | Msa1087480:CDS |
| TAGCCTTGACACTGATTTCA+AGG | 0.344509 | 7_3:-215999 | Msa1087490:CDS |
| CTTGTTTCTTTCAAAGGTAA+TGG | 0.356613 | 7_3:+214430 | Msa1087480:CDS |
| TTGTTTCTTTCAAAGGTAAT+GGG | 0.357414 | 7_3:+214431 | Msa1087480:CDS |
| CACAACAACACATGAAATAA+AGG | 0.365515 | 7_3:-214494 | None:intergenic |
| GAAATTGGGAAAATAGTAAC+AGG | 0.404325 | 7_3:+216057 | Msa1087480:CDS |
| ACTCTTCTCTCTCTCGGTAA+TGG | 0.418872 | 7_3:+214385 | Msa1087480:CDS |
| TTTATTTCATGTGTTGTTGT+GGG | 0.434815 | 7_3:+214496 | Msa1087480:CDS |
| CTTTATTTCATGTGTTGTTG+TGG | 0.454161 | 7_3:+214495 | Msa1087480:CDS |
| GCCACACTTGTTTCTTTCAA+AGG | 0.465678 | 7_3:+214424 | Msa1087480:CDS |
| TTGTTCAGTGTCTTCATCAA+TGG | 0.469754 | 7_3:+214613 | Msa1087480:intron |
| TGGTGAAAGCCTCAAAACTT+TGG | 0.469895 | 7_3:-214347 | None:intergenic |
| ATCAATGTTGTTGTGGCAGT+TGG | 0.487147 | 7_3:+214640 | Msa1087480:CDS |
| GGTGTCACTCTTCTCTCTCT+CGG | 0.487176 | 7_3:+214379 | Msa1087480:CDS |
| TGTGAAAATAAGAACCCATA+AGG | 0.488209 | 7_3:+215954 | Msa1087480:CDS |
| TTTCACTCTTACTCTTGTTG+GGG | 0.497838 | 7_3:-216038 | Msa1087490:CDS |
| ACAAGAGTAAGAGTGAAATT+GGG | 0.519071 | 7_3:+216043 | Msa1087480:CDS |
| GGTAATGGGACACAAGGCAT+TGG | 0.522056 | 7_3:+214445 | Msa1087480:CDS |
| AATCAGTGTCAAGGCTAGAA+AGG | 0.525707 | 7_3:+216005 | Msa1087480:CDS |
| GGATTCAACACTGTTCTTGG+TGG | 0.529370 | 7_3:+214466 | Msa1087480:CDS |
| TTGGAGAGATTATCAAGAGA+AGG | 0.561396 | 7_3:-214328 | None:intergenic |
| AGAGTGACACCAGCAATAGT+TGG | 0.584420 | 7_3:-214367 | None:intergenic |
| AGCAAGTGTCTACATCATCA+TGG | 0.594333 | 7_3:-216127 | Msa1087490:CDS |
| GTTCCTTGAAATCAGTGTCA+AGG | 0.600166 | 7_3:+215996 | Msa1087480:CDS |
| TTCAAAGGTAATGGGACACA+AGG | 0.612012 | 7_3:+214439 | Msa1087480:CDS |
| TGGTGAAATCAATGTTGTTG+TGG | 0.630057 | 7_3:+214633 | Msa1087480:CDS |
| ACCTTTGAAAGAAACAAGTG+TGG | 0.657131 | 7_3:-214425 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAAGAAAAAGAAAA+TGG | - | chr7_3:214732-214751 | None:intergenic | 10.0% |
| !! | TTAATTATATGCAAAAAAAA+AGG | - | chr7_3:215805-215824 | None:intergenic | 10.0% |
| !! | AAATTAAAAGAAAAAGAAAA+TGG | - | chr7_3:214732-214751 | None:intergenic | 10.0% |
| !! | TTAATTATATGCAAAAAAAA+AGG | - | chr7_3:215805-215824 | None:intergenic | 10.0% |
| !!! | CGTTTTTTTTTAAAAGTTAA+CGG | + | chr7_3:214805-214824 | Msa1087480:intron | 15.0% |
| !!! | CGTTTTTTTTTAAAAGTTAA+CGG | + | chr7_3:214805-214824 | Msa1087480:intron | 15.0% |
| !!! | TTTTTTAAAAGTTAACGGAA+AGG | + | chr7_3:214810-214829 | Msa1087480:intron | 20.0% |
| !!! | AACTTTTAAATGTGTCAATT+TGG | - | chr7_3:214869-214888 | None:intergenic | 20.0% |
| !! | ATTGACACATTTAAAAGTTA+AGG | + | chr7_3:214870-214889 | Msa1087480:intron | 20.0% |
| !! | TTGACACATTTAAAAGTTAA+GGG | + | chr7_3:214871-214890 | Msa1087480:intron | 20.0% |
| !! | TGAGAAGAAAAAATAAGTTA+AGG | + | chr7_3:214901-214920 | Msa1087480:intron | 20.0% |
| !! | GAGAAGAAAAAATAAGTTAA+GGG | + | chr7_3:214902-214921 | Msa1087480:intron | 20.0% |
| !!! | CTTGGTTGATATTTTTTATA+AGG | + | chr7_3:215110-215129 | Msa1087480:intron | 20.0% |
| !! | TAAAGAGGTTCTTATAAAAA+GGG | - | chr7_3:215382-215401 | None:intergenic | 20.0% |
| !! | TTAAAGAGGTTCTTATAAAA+AGG | - | chr7_3:215383-215402 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTAGTGAAATCAA+AGG | + | chr7_3:215583-215602 | Msa1087480:intron | 20.0% |
| !!! | TTTTTTAAAAGTTAACGGAA+AGG | + | chr7_3:214810-214829 | Msa1087480:intron | 20.0% |
| !!! | AACTTTTAAATGTGTCAATT+TGG | - | chr7_3:214869-214888 | None:intergenic | 20.0% |
| !! | ATTGACACATTTAAAAGTTA+AGG | + | chr7_3:214870-214889 | Msa1087480:intron | 20.0% |
| !! | TTGACACATTTAAAAGTTAA+GGG | + | chr7_3:214871-214890 | Msa1087480:intron | 20.0% |
| !! | TGAGAAGAAAAAATAAGTTA+AGG | + | chr7_3:214901-214920 | Msa1087480:intron | 20.0% |
| !! | GAGAAGAAAAAATAAGTTAA+GGG | + | chr7_3:214902-214921 | Msa1087480:intron | 20.0% |
| !!! | CTTGGTTGATATTTTTTATA+AGG | + | chr7_3:215110-215129 | Msa1087480:intron | 20.0% |
| !! | TAAAGAGGTTCTTATAAAAA+GGG | - | chr7_3:215382-215401 | None:intergenic | 20.0% |
| !! | TTAAAGAGGTTCTTATAAAA+AGG | - | chr7_3:215383-215402 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTAGTGAAATCAA+AGG | + | chr7_3:215583-215602 | Msa1087480:intron | 20.0% |
| ! | AACAACTAAGATTGATTGAT+TGG | + | chr7_3:214177-214196 | Msa1087480:intron | 25.0% |
| !!! | AATTTGATGATGTGCAAAAT+TGG | + | chr7_3:214214-214233 | Msa1087480:intron | 25.0% |
| ! | AATTGGAAATTTCCCTTTAT+TGG | + | chr7_3:214231-214250 | Msa1087480:intron | 25.0% |
| ! | ATTGGAAATTTCCCTTTATT+GGG | + | chr7_3:214232-214251 | Msa1087480:intron | 25.0% |
| !! | TTGTTTCTTTCAAAGGTAAT+GGG | + | chr7_3:214431-214450 | Msa1087480:CDS | 25.0% |
| !! | TTTATTTCATGTGTTGTTGT+GGG | + | chr7_3:214496-214515 | Msa1087480:CDS | 25.0% |
| ! | AAAGAAAAAGAAAATGGAAG+AGG | - | chr7_3:214726-214745 | None:intergenic | 25.0% |
| ! | ATAAAACAAGTTCAACCATT+AGG | - | chr7_3:214946-214965 | None:intergenic | 25.0% |
| ! | TTATCAAGAATAAGCTTCAT+TGG | - | chr7_3:215074-215093 | None:intergenic | 25.0% |
| ! | AATTATTTGACTCACTTTCT+TGG | + | chr7_3:215092-215111 | Msa1087480:intron | 25.0% |
| ! | ATGATATAACTGCACTTTAT+AGG | + | chr7_3:215618-215637 | Msa1087480:intron | 25.0% |
| !!! | AAATCAAACAGATTTTTGAG+AGG | - | chr7_3:215885-215904 | Msa1087490:CDS | 25.0% |
| ! | AACAACTAAGATTGATTGAT+TGG | + | chr7_3:214177-214196 | Msa1087480:intron | 25.0% |
| !!! | AATTTGATGATGTGCAAAAT+TGG | + | chr7_3:214214-214233 | Msa1087480:intron | 25.0% |
| ! | AATTGGAAATTTCCCTTTAT+TGG | + | chr7_3:214231-214250 | Msa1087480:intron | 25.0% |
| ! | ATTGGAAATTTCCCTTTATT+GGG | + | chr7_3:214232-214251 | Msa1087480:intron | 25.0% |
| !! | TTGTTTCTTTCAAAGGTAAT+GGG | + | chr7_3:214431-214450 | Msa1087480:CDS | 25.0% |
| !! | TTTATTTCATGTGTTGTTGT+GGG | + | chr7_3:214496-214515 | Msa1087480:CDS | 25.0% |
| ! | AAAGAAAAAGAAAATGGAAG+AGG | - | chr7_3:214726-214745 | None:intergenic | 25.0% |
| ! | ATAAAACAAGTTCAACCATT+AGG | - | chr7_3:214946-214965 | None:intergenic | 25.0% |
| ! | TTATCAAGAATAAGCTTCAT+TGG | - | chr7_3:215074-215093 | None:intergenic | 25.0% |
| ! | AATTATTTGACTCACTTTCT+TGG | + | chr7_3:215092-215111 | Msa1087480:intron | 25.0% |
| ! | ATGATATAACTGCACTTTAT+AGG | + | chr7_3:215618-215637 | Msa1087480:intron | 25.0% |
| !!! | AAATCAAACAGATTTTTGAG+AGG | - | chr7_3:215885-215904 | Msa1087490:CDS | 25.0% |
| CAAAAGCCATAGAAACAAAA+GGG | - | chr7_3:214263-214282 | None:intergenic | 30.0% | |
| !!! | TTTGGTTCTGTTCTATCTTT+TGG | + | chr7_3:214279-214298 | Msa1087480:intron | 30.0% |
| ! | ATAATCTCTCCAAAGTTTTG+AGG | + | chr7_3:214338-214357 | Msa1087480:CDS | 30.0% |
| ! | CTTGTTTCTTTCAAAGGTAA+TGG | + | chr7_3:214430-214449 | Msa1087480:CDS | 30.0% |
| CACAACAACACATGAAATAA+AGG | - | chr7_3:214497-214516 | None:intergenic | 30.0% | |
| ! | CTTTATTTCATGTGTTGTTG+TGG | + | chr7_3:214495-214514 | Msa1087480:CDS | 30.0% |
| !! | TGGTTTTTGTTTGATGTATG+TGG | + | chr7_3:214660-214679 | Msa1087480:intron | 30.0% |
| AGCAAATAAAACTACCAAGA+TGG | - | chr7_3:215021-215040 | None:intergenic | 30.0% | |
| !! | TTTTATTTGCTCAGGATTTG+TGG | + | chr7_3:215030-215049 | Msa1087480:intron | 30.0% |
| ! | TTAGACTTTGTTTGAGAGTT+CGG | - | chr7_3:215277-215296 | None:intergenic | 30.0% |
| ! | CAAAGTCTAAAGTAAATCGT+TGG | + | chr7_3:215287-215306 | Msa1087480:intron | 30.0% |
| AAGAACCTCTTTAAATGTCA+AGG | + | chr7_3:215389-215408 | Msa1087480:intron | 30.0% | |
| TCAATTACATTCTTCTAAGC+TGG | + | chr7_3:215755-215774 | Msa1087480:intron | 30.0% | |
| CAATTACATTCTTCTAAGCT+GGG | + | chr7_3:215756-215775 | Msa1087480:intron | 30.0% | |
| TGTGAAAATAAGAACCCATA+AGG | + | chr7_3:215954-215973 | Msa1087480:CDS | 30.0% | |
| ATTTCACTCTTACTCTTGTT+GGG | - | chr7_3:216042-216061 | Msa1087490:CDS | 30.0% | |
| AATTTCACTCTTACTCTTGT+TGG | - | chr7_3:216043-216062 | Msa1087490:CDS | 30.0% | |
| AACAAGAGTAAGAGTGAAAT+TGG | + | chr7_3:216042-216061 | Msa1087480:CDS | 30.0% | |
| ACAAGAGTAAGAGTGAAATT+GGG | + | chr7_3:216043-216062 | Msa1087480:CDS | 30.0% | |
| GAAATTGGGAAAATAGTAAC+AGG | + | chr7_3:216057-216076 | Msa1087480:CDS | 30.0% | |
| CAAAAGCCATAGAAACAAAA+GGG | - | chr7_3:214263-214282 | None:intergenic | 30.0% | |
| !!! | TTTGGTTCTGTTCTATCTTT+TGG | + | chr7_3:214279-214298 | Msa1087480:intron | 30.0% |
| ! | ATAATCTCTCCAAAGTTTTG+AGG | + | chr7_3:214338-214357 | Msa1087480:CDS | 30.0% |
| ! | CTTGTTTCTTTCAAAGGTAA+TGG | + | chr7_3:214430-214449 | Msa1087480:CDS | 30.0% |
| CACAACAACACATGAAATAA+AGG | - | chr7_3:214497-214516 | None:intergenic | 30.0% | |
| ! | CTTTATTTCATGTGTTGTTG+TGG | + | chr7_3:214495-214514 | Msa1087480:CDS | 30.0% |
| !! | TGGTTTTTGTTTGATGTATG+TGG | + | chr7_3:214660-214679 | Msa1087480:intron | 30.0% |
| AGCAAATAAAACTACCAAGA+TGG | - | chr7_3:215021-215040 | None:intergenic | 30.0% | |
| !! | TTTTATTTGCTCAGGATTTG+TGG | + | chr7_3:215030-215049 | Msa1087480:intron | 30.0% |
| ! | TTAGACTTTGTTTGAGAGTT+CGG | - | chr7_3:215277-215296 | None:intergenic | 30.0% |
| ! | CAAAGTCTAAAGTAAATCGT+TGG | + | chr7_3:215287-215306 | Msa1087480:intron | 30.0% |
| AAGAACCTCTTTAAATGTCA+AGG | + | chr7_3:215389-215408 | Msa1087480:intron | 30.0% | |
| TCAATTACATTCTTCTAAGC+TGG | + | chr7_3:215755-215774 | Msa1087480:intron | 30.0% | |
| CAATTACATTCTTCTAAGCT+GGG | + | chr7_3:215756-215775 | Msa1087480:intron | 30.0% | |
| TGTGAAAATAAGAACCCATA+AGG | + | chr7_3:215954-215973 | Msa1087480:CDS | 30.0% | |
| ATTTCACTCTTACTCTTGTT+GGG | - | chr7_3:216042-216061 | Msa1087490:CDS | 30.0% | |
| AATTTCACTCTTACTCTTGT+TGG | - | chr7_3:216043-216062 | Msa1087490:CDS | 30.0% | |
| AACAAGAGTAAGAGTGAAAT+TGG | + | chr7_3:216042-216061 | Msa1087480:CDS | 30.0% | |
| ACAAGAGTAAGAGTGAAATT+GGG | + | chr7_3:216043-216062 | Msa1087480:CDS | 30.0% | |
| GAAATTGGGAAAATAGTAAC+AGG | + | chr7_3:216057-216076 | Msa1087480:CDS | 30.0% | |
| GAGGTGAAAAAAAAACAGAG+AGG | + | chr7_3:214138-214157 | Msa1087480:intron | 35.0% | |
| GTGAAAAAAAAACAGAGAGG+AGG | + | chr7_3:214141-214160 | Msa1087480:intron | 35.0% | |
| ! | AAAGGGTATGACCCAATAAA+GGG | - | chr7_3:214246-214265 | None:intergenic | 35.0% |
| ! | AAAAGGGTATGACCCAATAA+AGG | - | chr7_3:214247-214266 | None:intergenic | 35.0% |
| !!! | GTCATACCCTTTTGTTTCTA+TGG | + | chr7_3:214254-214273 | Msa1087480:intron | 35.0% |
| CCAAAAGCCATAGAAACAAA+AGG | - | chr7_3:214264-214283 | None:intergenic | 35.0% | |
| !!! | CCTTTTGTTTCTATGGCTTT+TGG | + | chr7_3:214261-214280 | Msa1087480:intron | 35.0% |
| TTGGAGAGATTATCAAGAGA+AGG | - | chr7_3:214331-214350 | None:intergenic | 35.0% | |
| ! | ACCTTTGAAAGAAACAAGTG+TGG | - | chr7_3:214428-214447 | None:intergenic | 35.0% |
| ATTGGATTCAACACTGTTCT+TGG | + | chr7_3:214463-214482 | Msa1087480:CDS | 35.0% | |
| TTGTTCAGTGTCTTCATCAA+TGG | + | chr7_3:214613-214632 | Msa1087480:intron | 35.0% | |
| TGGTGAAATCAATGTTGTTG+TGG | + | chr7_3:214633-214652 | Msa1087480:CDS | 35.0% | |
| AGTTAACGGAAAGGATCAAA+TGG | + | chr7_3:214819-214838 | Msa1087480:intron | 35.0% | |
| GTTAACGGAAAGGATCAAAT+GGG | + | chr7_3:214820-214839 | Msa1087480:intron | 35.0% | |
| GAAAGGATCAAATGGGTAAA+CGG | + | chr7_3:214827-214846 | Msa1087480:intron | 35.0% | |
| ATTAGGCTTAATACATACGC+AGG | - | chr7_3:214929-214948 | None:intergenic | 35.0% | |
| TGCGTATGTATTAAGCCTAA+TGG | + | chr7_3:214928-214947 | Msa1087480:intron | 35.0% | |
| CAATACCAAGATTTGTCTCT+CGG | - | chr7_3:214981-215000 | None:intergenic | 35.0% | |
| !!! | CTTGGTAGTTTTATTTGCTC+AGG | + | chr7_3:215022-215041 | Msa1087480:intron | 35.0% |
| TCAAGAATAAGCTTCATTGG+AGG | - | chr7_3:215071-215090 | None:intergenic | 35.0% | |
| ! | ATCATGCTAACCAGTGTTTT+AGG | + | chr7_3:215133-215152 | Msa1087480:intron | 35.0% |
| ! | TCATGCTAACCAGTGTTTTA+GGG | + | chr7_3:215134-215153 | Msa1087480:intron | 35.0% |
| AACAATATCCCCTAAAACAC+TGG | - | chr7_3:215146-215165 | None:intergenic | 35.0% | |
| AAGGGAAAGATGACTTTAGA+GGG | - | chr7_3:215249-215268 | None:intergenic | 35.0% | |
| TAAATCGTTGGCCATGATTT+GGG | + | chr7_3:215299-215318 | Msa1087480:intron | 35.0% | |
| ATGCACCTTGACATTTAAAG+AGG | - | chr7_3:215397-215416 | None:intergenic | 35.0% | |
| TCTCAAAAACATGCAGCAAT+TGG | + | chr7_3:215486-215505 | Msa1087480:intron | 35.0% | |
| CTCAAAAACATGCAGCAATT+GGG | + | chr7_3:215487-215506 | Msa1087480:intron | 35.0% | |
| ! | TATACTCAGAGGCAGTTTTA+AGG | + | chr7_3:215539-215558 | Msa1087480:intron | 35.0% |
| !!! | ACGTACTTTTTTTTTTCCCG+AGG | + | chr7_3:215644-215663 | Msa1087480:intron | 35.0% |
| !!! | CGTACTTTTTTTTTTCCCGA+GGG | + | chr7_3:215645-215664 | Msa1087480:intron | 35.0% |
| !!! | GTACTTTTTTTTTTCCCGAG+GGG | + | chr7_3:215646-215665 | Msa1087480:intron | 35.0% |
| AAGCATTCTACAATCTACAC+CGG | + | chr7_3:215823-215842 | Msa1087480:intron | 35.0% | |
| !! | TCTGATCAATTTGGCCTTAT+GGG | - | chr7_3:215971-215990 | Msa1087490:CDS | 35.0% |
| GAACATTGCTCTGATCAATT+TGG | - | chr7_3:215980-215999 | Msa1087490:CDS | 35.0% | |
| TTTCACTCTTACTCTTGTTG+GGG | - | chr7_3:216041-216060 | Msa1087490:CDS | 35.0% | |
| GAGGTGAAAAAAAAACAGAG+AGG | + | chr7_3:214138-214157 | Msa1087480:intron | 35.0% | |
| GTGAAAAAAAAACAGAGAGG+AGG | + | chr7_3:214141-214160 | Msa1087480:intron | 35.0% | |
| ! | AAAGGGTATGACCCAATAAA+GGG | - | chr7_3:214246-214265 | None:intergenic | 35.0% |
| ! | AAAAGGGTATGACCCAATAA+AGG | - | chr7_3:214247-214266 | None:intergenic | 35.0% |
| !!! | GTCATACCCTTTTGTTTCTA+TGG | + | chr7_3:214254-214273 | Msa1087480:intron | 35.0% |
| CCAAAAGCCATAGAAACAAA+AGG | - | chr7_3:214264-214283 | None:intergenic | 35.0% | |
| !!! | CCTTTTGTTTCTATGGCTTT+TGG | + | chr7_3:214261-214280 | Msa1087480:intron | 35.0% |
| TTGGAGAGATTATCAAGAGA+AGG | - | chr7_3:214331-214350 | None:intergenic | 35.0% | |
| ! | ACCTTTGAAAGAAACAAGTG+TGG | - | chr7_3:214428-214447 | None:intergenic | 35.0% |
| ATTGGATTCAACACTGTTCT+TGG | + | chr7_3:214463-214482 | Msa1087480:CDS | 35.0% | |
| TTGTTCAGTGTCTTCATCAA+TGG | + | chr7_3:214613-214632 | Msa1087480:intron | 35.0% | |
| TGGTGAAATCAATGTTGTTG+TGG | + | chr7_3:214633-214652 | Msa1087480:CDS | 35.0% | |
| AGTTAACGGAAAGGATCAAA+TGG | + | chr7_3:214819-214838 | Msa1087480:intron | 35.0% | |
| GTTAACGGAAAGGATCAAAT+GGG | + | chr7_3:214820-214839 | Msa1087480:intron | 35.0% | |
| GAAAGGATCAAATGGGTAAA+CGG | + | chr7_3:214827-214846 | Msa1087480:intron | 35.0% | |
| ATTAGGCTTAATACATACGC+AGG | - | chr7_3:214929-214948 | None:intergenic | 35.0% | |
| TGCGTATGTATTAAGCCTAA+TGG | + | chr7_3:214928-214947 | Msa1087480:intron | 35.0% | |
| CAATACCAAGATTTGTCTCT+CGG | - | chr7_3:214981-215000 | None:intergenic | 35.0% | |
| !!! | CTTGGTAGTTTTATTTGCTC+AGG | + | chr7_3:215022-215041 | Msa1087480:intron | 35.0% |
| TCAAGAATAAGCTTCATTGG+AGG | - | chr7_3:215071-215090 | None:intergenic | 35.0% | |
| ! | ATCATGCTAACCAGTGTTTT+AGG | + | chr7_3:215133-215152 | Msa1087480:intron | 35.0% |
| ! | TCATGCTAACCAGTGTTTTA+GGG | + | chr7_3:215134-215153 | Msa1087480:intron | 35.0% |
| AACAATATCCCCTAAAACAC+TGG | - | chr7_3:215146-215165 | None:intergenic | 35.0% | |
| AAGGGAAAGATGACTTTAGA+GGG | - | chr7_3:215249-215268 | None:intergenic | 35.0% | |
| TAAATCGTTGGCCATGATTT+GGG | + | chr7_3:215299-215318 | Msa1087480:intron | 35.0% | |
| ATGCACCTTGACATTTAAAG+AGG | - | chr7_3:215397-215416 | None:intergenic | 35.0% | |
| TCTCAAAAACATGCAGCAAT+TGG | + | chr7_3:215486-215505 | Msa1087480:intron | 35.0% | |
| CTCAAAAACATGCAGCAATT+GGG | + | chr7_3:215487-215506 | Msa1087480:intron | 35.0% | |
| ! | TATACTCAGAGGCAGTTTTA+AGG | + | chr7_3:215539-215558 | Msa1087480:intron | 35.0% |
| !!! | ACGTACTTTTTTTTTTCCCG+AGG | + | chr7_3:215644-215663 | Msa1087480:intron | 35.0% |
| !!! | CGTACTTTTTTTTTTCCCGA+GGG | + | chr7_3:215645-215664 | Msa1087480:intron | 35.0% |
| !!! | GTACTTTTTTTTTTCCCGAG+GGG | + | chr7_3:215646-215665 | Msa1087480:intron | 35.0% |
| AAGCATTCTACAATCTACAC+CGG | + | chr7_3:215823-215842 | Msa1087480:intron | 35.0% | |
| !! | TCTGATCAATTTGGCCTTAT+GGG | - | chr7_3:215971-215990 | Msa1087490:CDS | 35.0% |
| GAACATTGCTCTGATCAATT+TGG | - | chr7_3:215980-215999 | Msa1087490:CDS | 35.0% | |
| TTTCACTCTTACTCTTGTTG+GGG | - | chr7_3:216041-216060 | Msa1087490:CDS | 35.0% | |
| TGGTGAAAGCCTCAAAACTT+TGG | - | chr7_3:214350-214369 | None:intergenic | 40.0% | |
| ! | GCCACACTTGTTTCTTTCAA+AGG | + | chr7_3:214424-214443 | Msa1087480:CDS | 40.0% |
| !! | TTCAAAGGTAATGGGACACA+AGG | + | chr7_3:214439-214458 | Msa1087480:CDS | 40.0% |
| ATCAATGTTGTTGTGGCAGT+TGG | + | chr7_3:214640-214659 | Msa1087480:CDS | 40.0% | |
| ATCAAATGGGTAAACGGAAG+AGG | + | chr7_3:214833-214852 | Msa1087480:intron | 40.0% | |
| AGAATAAGCTTCATTGGAGG+AGG | - | chr7_3:215068-215087 | None:intergenic | 40.0% | |
| !! | CATGCTAACCAGTGTTTTAG+GGG | + | chr7_3:215135-215154 | Msa1087480:intron | 40.0% |
| GAAGGGAAAGATGACTTTAG+AGG | - | chr7_3:215250-215269 | None:intergenic | 40.0% | |
| GTAAATCGTTGGCCATGATT+TGG | + | chr7_3:215298-215317 | Msa1087480:intron | 40.0% | |
| TCTTACTCGTACCCAAATCA+TGG | - | chr7_3:215313-215332 | None:intergenic | 40.0% | |
| ATACCCCGAACTCAAAACAT+AGG | + | chr7_3:215436-215455 | Msa1087480:intron | 40.0% | |
| TACCCCGAACTCAAAACATA+GGG | + | chr7_3:215437-215456 | Msa1087480:intron | 40.0% | |
| !!! | ACAGCCCTATGTTTTGAGTT+CGG | - | chr7_3:215444-215463 | None:intergenic | 40.0% |
| ACTCAAAACATAGGGCTGTT+TGG | + | chr7_3:215445-215464 | Msa1087480:intron | 40.0% | |
| CTCAAAACATAGGGCTGTTT+GGG | + | chr7_3:215446-215465 | Msa1087480:intron | 40.0% | |
| !!! | AGAGGCAGTTTTAAGGCAAA+GGG | + | chr7_3:215546-215565 | Msa1087480:intron | 40.0% |
| AAAATTCCTCCGCAACTTAG+AGG | - | chr7_3:215856-215875 | Msa1087490:CDS | 40.0% | |
| TTTCTCAGACAGTACTTTGC+TGG | + | chr7_3:215903-215922 | Msa1087480:intron | 40.0% | |
| TTCTCAGACAGTACTTTGCT+GGG | + | chr7_3:215904-215923 | Msa1087480:intron | 40.0% | |
| !! | CTCTGATCAATTTGGCCTTA+TGG | - | chr7_3:215972-215991 | Msa1087490:CDS | 40.0% |
| GTTCCTTGAAATCAGTGTCA+AGG | + | chr7_3:215996-216015 | Msa1087480:CDS | 40.0% | |
| !! | TAGCCTTGACACTGATTTCA+AGG | - | chr7_3:216002-216021 | Msa1087490:CDS | 40.0% |
| AATCAGTGTCAAGGCTAGAA+AGG | + | chr7_3:216005-216024 | Msa1087480:CDS | 40.0% | |
| GTTGTAGTTGCAAGAGAGTT+TGG | + | chr7_3:216082-216101 | Msa1087480:CDS | 40.0% | |
| TGGTGAAAGCCTCAAAACTT+TGG | - | chr7_3:214350-214369 | None:intergenic | 40.0% | |
| ! | GCCACACTTGTTTCTTTCAA+AGG | + | chr7_3:214424-214443 | Msa1087480:CDS | 40.0% |
| !! | TTCAAAGGTAATGGGACACA+AGG | + | chr7_3:214439-214458 | Msa1087480:CDS | 40.0% |
| ATCAATGTTGTTGTGGCAGT+TGG | + | chr7_3:214640-214659 | Msa1087480:CDS | 40.0% | |
| ATCAAATGGGTAAACGGAAG+AGG | + | chr7_3:214833-214852 | Msa1087480:intron | 40.0% | |
| AGAATAAGCTTCATTGGAGG+AGG | - | chr7_3:215068-215087 | None:intergenic | 40.0% | |
| !! | CATGCTAACCAGTGTTTTAG+GGG | + | chr7_3:215135-215154 | Msa1087480:intron | 40.0% |
| GAAGGGAAAGATGACTTTAG+AGG | - | chr7_3:215250-215269 | None:intergenic | 40.0% | |
| GTAAATCGTTGGCCATGATT+TGG | + | chr7_3:215298-215317 | Msa1087480:intron | 40.0% | |
| TCTTACTCGTACCCAAATCA+TGG | - | chr7_3:215313-215332 | None:intergenic | 40.0% | |
| ATACCCCGAACTCAAAACAT+AGG | + | chr7_3:215436-215455 | Msa1087480:intron | 40.0% | |
| TACCCCGAACTCAAAACATA+GGG | + | chr7_3:215437-215456 | Msa1087480:intron | 40.0% | |
| !!! | ACAGCCCTATGTTTTGAGTT+CGG | - | chr7_3:215444-215463 | None:intergenic | 40.0% |
| ACTCAAAACATAGGGCTGTT+TGG | + | chr7_3:215445-215464 | Msa1087480:intron | 40.0% | |
| CTCAAAACATAGGGCTGTTT+GGG | + | chr7_3:215446-215465 | Msa1087480:intron | 40.0% | |
| !!! | AGAGGCAGTTTTAAGGCAAA+GGG | + | chr7_3:215546-215565 | Msa1087480:intron | 40.0% |
| AAAATTCCTCCGCAACTTAG+AGG | - | chr7_3:215856-215875 | Msa1087490:CDS | 40.0% | |
| TTTCTCAGACAGTACTTTGC+TGG | + | chr7_3:215903-215922 | Msa1087480:intron | 40.0% | |
| TTCTCAGACAGTACTTTGCT+GGG | + | chr7_3:215904-215923 | Msa1087480:intron | 40.0% | |
| !! | CTCTGATCAATTTGGCCTTA+TGG | - | chr7_3:215972-215991 | Msa1087490:CDS | 40.0% |
| GTTCCTTGAAATCAGTGTCA+AGG | + | chr7_3:215996-216015 | Msa1087480:CDS | 40.0% | |
| !! | TAGCCTTGACACTGATTTCA+AGG | - | chr7_3:216002-216021 | Msa1087490:CDS | 40.0% |
| AATCAGTGTCAAGGCTAGAA+AGG | + | chr7_3:216005-216024 | Msa1087480:CDS | 40.0% | |
| GTTGTAGTTGCAAGAGAGTT+TGG | + | chr7_3:216082-216101 | Msa1087480:CDS | 40.0% | |
| AGGCTTTCACCAACTATTGC+TGG | + | chr7_3:214358-214377 | Msa1087480:CDS | 45.0% | |
| AGAGTGACACCAGCAATAGT+TGG | - | chr7_3:214370-214389 | None:intergenic | 45.0% | |
| ACTCTTCTCTCTCTCGGTAA+TGG | + | chr7_3:214385-214404 | Msa1087480:CDS | 45.0% | |
| GGATTCAACACTGTTCTTGG+TGG | + | chr7_3:214466-214485 | Msa1087480:CDS | 45.0% | |
| !! | GAAGAGGCGTGACATTTTCT+GGG | - | chr7_3:214710-214729 | None:intergenic | 45.0% |
| GTAAACGGAAGAGGACTTAC+AGG | + | chr7_3:214842-214861 | Msa1087480:intron | 45.0% | |
| GTGTTCCGAGAGACAAATCT+TGG | + | chr7_3:214973-214992 | Msa1087480:intron | 45.0% | |
| CAAGATGGCTCACAATAGCA+AGG | - | chr7_3:215006-215025 | None:intergenic | 45.0% | |
| !! | CTTGCTATTGTGAGCCATCT+TGG | + | chr7_3:215004-215023 | Msa1087480:intron | 45.0% |
| TTTGAGAGTTCGGAGAGGAA+GGG | - | chr7_3:215267-215286 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGAGAGTTCGGAG+AGG | - | chr7_3:215272-215291 | None:intergenic | 45.0% |
| GATTTGGGTACGAGTAAGAG+CGG | + | chr7_3:215314-215333 | Msa1087480:intron | 45.0% | |
| ATTTGGGTACGAGTAAGAGC+GGG | + | chr7_3:215315-215334 | Msa1087480:intron | 45.0% | |
| !!! | AGCCCTATGTTTTGAGTTCG+GGG | - | chr7_3:215442-215461 | None:intergenic | 45.0% |
| !!! | CAGCCCTATGTTTTGAGTTC+GGG | - | chr7_3:215443-215462 | None:intergenic | 45.0% |
| AACATAGGGCTGTTTGGGTA+AGG | + | chr7_3:215451-215470 | Msa1087480:intron | 45.0% | |
| ACATAGGGCTGTTTGGGTAA+GGG | + | chr7_3:215452-215471 | Msa1087480:intron | 45.0% | |
| ACATGCAGCAATTGGGCTTA+AGG | + | chr7_3:215494-215513 | Msa1087480:intron | 45.0% | |
| CATGCAGCAATTGGGCTTAA+GGG | + | chr7_3:215495-215514 | Msa1087480:intron | 45.0% | |
| ! | AAGCGCAAAGGTATACTCAG+AGG | + | chr7_3:215528-215547 | Msa1087480:intron | 45.0% |
| !!! | CAGAGGCAGTTTTAAGGCAA+AGG | + | chr7_3:215545-215564 | Msa1087480:intron | 45.0% |
| GCAACTTAGAGGTAGATTGC+CGG | - | chr7_3:215845-215864 | Msa1087490:CDS | 45.0% | |
| GGCAATCTACCTCTAAGTTG+CGG | + | chr7_3:215844-215863 | Msa1087480:intron | 45.0% | |
| AATCTACCTCTAAGTTGCGG+AGG | + | chr7_3:215847-215866 | Msa1087480:intron | 45.0% | |
| AGGCTTTCACCAACTATTGC+TGG | + | chr7_3:214358-214377 | Msa1087480:CDS | 45.0% | |
| AGAGTGACACCAGCAATAGT+TGG | - | chr7_3:214370-214389 | None:intergenic | 45.0% | |
| ACTCTTCTCTCTCTCGGTAA+TGG | + | chr7_3:214385-214404 | Msa1087480:CDS | 45.0% | |
| GGATTCAACACTGTTCTTGG+TGG | + | chr7_3:214466-214485 | Msa1087480:CDS | 45.0% | |
| !! | GAAGAGGCGTGACATTTTCT+GGG | - | chr7_3:214710-214729 | None:intergenic | 45.0% |
| GTAAACGGAAGAGGACTTAC+AGG | + | chr7_3:214842-214861 | Msa1087480:intron | 45.0% | |
| GTGTTCCGAGAGACAAATCT+TGG | + | chr7_3:214973-214992 | Msa1087480:intron | 45.0% | |
| CAAGATGGCTCACAATAGCA+AGG | - | chr7_3:215006-215025 | None:intergenic | 45.0% | |
| !! | CTTGCTATTGTGAGCCATCT+TGG | + | chr7_3:215004-215023 | Msa1087480:intron | 45.0% |
| TTTGAGAGTTCGGAGAGGAA+GGG | - | chr7_3:215267-215286 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGAGAGTTCGGAG+AGG | - | chr7_3:215272-215291 | None:intergenic | 45.0% |
| GATTTGGGTACGAGTAAGAG+CGG | + | chr7_3:215314-215333 | Msa1087480:intron | 45.0% | |
| ATTTGGGTACGAGTAAGAGC+GGG | + | chr7_3:215315-215334 | Msa1087480:intron | 45.0% | |
| !!! | AGCCCTATGTTTTGAGTTCG+GGG | - | chr7_3:215442-215461 | None:intergenic | 45.0% |
| !!! | CAGCCCTATGTTTTGAGTTC+GGG | - | chr7_3:215443-215462 | None:intergenic | 45.0% |
| AACATAGGGCTGTTTGGGTA+AGG | + | chr7_3:215451-215470 | Msa1087480:intron | 45.0% | |
| ACATAGGGCTGTTTGGGTAA+GGG | + | chr7_3:215452-215471 | Msa1087480:intron | 45.0% | |
| ACATGCAGCAATTGGGCTTA+AGG | + | chr7_3:215494-215513 | Msa1087480:intron | 45.0% | |
| CATGCAGCAATTGGGCTTAA+GGG | + | chr7_3:215495-215514 | Msa1087480:intron | 45.0% | |
| ! | AAGCGCAAAGGTATACTCAG+AGG | + | chr7_3:215528-215547 | Msa1087480:intron | 45.0% |
| !!! | CAGAGGCAGTTTTAAGGCAA+AGG | + | chr7_3:215545-215564 | Msa1087480:intron | 45.0% |
| GCAACTTAGAGGTAGATTGC+CGG | - | chr7_3:215845-215864 | Msa1087490:CDS | 45.0% | |
| GGCAATCTACCTCTAAGTTG+CGG | + | chr7_3:215844-215863 | Msa1087480:intron | 45.0% | |
| AATCTACCTCTAAGTTGCGG+AGG | + | chr7_3:215847-215866 | Msa1087480:intron | 45.0% | |
| !! | GGTGTCACTCTTCTCTCTCT+CGG | + | chr7_3:214379-214398 | Msa1087480:CDS | 50.0% |
| !! | GGTAATGGGACACAAGGCAT+TGG | + | chr7_3:214445-214464 | Msa1087480:CDS | 50.0% |
| !! | GGAAGAGGCGTGACATTTTC+TGG | - | chr7_3:214711-214730 | None:intergenic | 50.0% |
| TGCTCAGGATTTGTGGTTCG+TGG | + | chr7_3:215037-215056 | Msa1087480:intron | 50.0% | |
| GTTTGAGAGTTCGGAGAGGA+AGG | - | chr7_3:215268-215287 | None:intergenic | 50.0% | |
| TCGATTGTTTGTCTCCCCTC+GGG | - | chr7_3:215663-215682 | None:intergenic | 50.0% | |
| CTCGATTGTTTGTCTCCCCT+CGG | - | chr7_3:215664-215683 | None:intergenic | 50.0% | |
| !! | GGTGTCACTCTTCTCTCTCT+CGG | + | chr7_3:214379-214398 | Msa1087480:CDS | 50.0% |
| !! | GGTAATGGGACACAAGGCAT+TGG | + | chr7_3:214445-214464 | Msa1087480:CDS | 50.0% |
| !! | GGAAGAGGCGTGACATTTTC+TGG | - | chr7_3:214711-214730 | None:intergenic | 50.0% |
| TGCTCAGGATTTGTGGTTCG+TGG | + | chr7_3:215037-215056 | Msa1087480:intron | 50.0% | |
| GTTTGAGAGTTCGGAGAGGA+AGG | - | chr7_3:215268-215287 | None:intergenic | 50.0% | |
| TCGATTGTTTGTCTCCCCTC+GGG | - | chr7_3:215663-215682 | None:intergenic | 50.0% | |
| CTCGATTGTTTGTCTCCCCT+CGG | - | chr7_3:215664-215683 | None:intergenic | 50.0% | |
| GGTCGCAGAAACAAGCGCAA+AGG | + | chr7_3:215516-215535 | Msa1087480:intron | 55.0% | |
| GGTCGCAGAAACAAGCGCAA+AGG | + | chr7_3:215516-215535 | Msa1087480:intron | 55.0% | |
| TGGGTACGAGTAAGAGCGGG+TGG | + | chr7_3:215318-215337 | Msa1087480:intron | 60.0% | |
| GGGTACGAGTAAGAGCGGGT+GGG | + | chr7_3:215319-215338 | Msa1087480:intron | 60.0% | |
| TGGGTACGAGTAAGAGCGGG+TGG | + | chr7_3:215318-215337 | Msa1087480:intron | 60.0% | |
| GGGTACGAGTAAGAGCGGGT+GGG | + | chr7_3:215319-215338 | Msa1087480:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 214120 | 216140 | 214120 | ID=Msa1087480;Name=Msa1087480 |
| chr7_3 | mRNA | 214120 | 216140 | 214120 | ID=Msa1087480-mRNA-1;Parent=Msa1087480;Name=Msa1087480-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.25|1|1|4|0|152 |
| chr7_3 | exon | 214120 | 214123 | 214120 | ID=Msa1087480-mRNA-1:exon:97;Parent=Msa1087480-mRNA-1 |
| chr7_3 | exon | 214311 | 214526 | 214311 | ID=Msa1087480-mRNA-1:exon:98;Parent=Msa1087480-mRNA-1 |
| chr7_3 | exon | 214621 | 214661 | 214621 | ID=Msa1087480-mRNA-1:exon:99;Parent=Msa1087480-mRNA-1 |
| chr7_3 | exon | 215943 | 216140 | 215943 | ID=Msa1087480-mRNA-1:exon:100;Parent=Msa1087480-mRNA-1 |
| chr7_3 | CDS | 214120 | 214123 | 214120 | ID=Msa1087480-mRNA-1:cds;Parent=Msa1087480-mRNA-1 |
| chr7_3 | CDS | 214311 | 214526 | 214311 | ID=Msa1087480-mRNA-1:cds;Parent=Msa1087480-mRNA-1 |
| chr7_3 | CDS | 214621 | 214661 | 214621 | ID=Msa1087480-mRNA-1:cds;Parent=Msa1087480-mRNA-1 |
| chr7_3 | CDS | 215943 | 216140 | 215943 | ID=Msa1087480-mRNA-1:cds;Parent=Msa1087480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
