AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0747500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0747500 MtrunA17_Chr6g0482041 95.238 210 10 0 260 469 4 213 2.58e-148 421
Msa0747500 MtrunA17_Chr6g0482041 44.444 153 47 5 140 259 2 149 4.52e-25 102
Msa0747500 MtrunA17_Chr6g0482041 39.548 177 65 6 1 139 1 173 6.42e-24 99.4
Msa0747500 MtrunA17_Chr6g0481951 58.291 199 81 2 271 468 16 213 4.75e-72 227
Msa0747500 MtrunA17_Chr6g0481951 51.079 139 32 4 153 259 16 150 9.28e-31 118
Msa0747500 MtrunA17_Chr6g0481951 40.909 176 65 4 1 139 1 174 7.64e-25 102
Msa0747500 MtrunA17_Chr6g0481961 58.794 199 80 2 271 468 16 213 8.39e-72 226
Msa0747500 MtrunA17_Chr6g0481961 51.079 139 32 4 153 259 16 150 8.05e-31 118
Msa0747500 MtrunA17_Chr6g0481961 40.909 176 65 4 1 139 1 174 7.80e-25 102
Msa0747500 MtrunA17_Chr6g0482031 78.767 146 3 1 142 259 4 149 1.48e-61 199
Msa0747500 MtrunA17_Chr6g0482031 53.266 199 83 6 273 466 17 210 3.91e-60 196
Msa0747500 MtrunA17_Chr6g0482031 50.943 159 41 5 18 140 17 174 4.03e-39 140
Msa0747500 MtrunA17_Chr6g0482021 69.753 162 26 2 1 140 1 161 3.30e-61 198
Msa0747500 MtrunA17_Chr6g0482021 42.424 198 96 5 271 466 16 197 8.32e-45 155
Msa0747500 MtrunA17_Chr6g0482021 53.968 126 34 4 153 259 16 136 6.49e-31 118
Msa0747500 MtrunA17_Chr6g0482011 48.731 197 89 5 271 465 15 201 1.10e-55 184
Msa0747500 MtrunA17_Chr6g0482011 41.667 156 54 7 16 139 15 165 8.43e-24 99.0
Msa0747500 MtrunA17_Chr6g0482011 42.857 133 44 4 153 259 15 141 4.30e-22 94.0
Msa0747500 MtrunA17_Chr7g0228581 46.907 194 90 4 278 469 21 203 5.62e-52 174
Msa0747500 MtrunA17_Chr7g0228581 35.252 139 60 6 29 139 27 163 1.75e-16 78.2
Msa0747500 MtrunA17_Chr7g0228581 37.288 118 49 5 164 259 25 139 1.63e-11 63.5
Msa0747500 MtrunA17_Chr6g0481941 44.762 210 95 9 266 466 6 203 1.33e-43 152
Msa0747500 MtrunA17_Chr6g0481911 42.995 207 101 8 266 466 6 201 1.34e-42 149
Msa0747500 MtrunA17_Chr3g0137421 32.877 219 112 10 260 469 6 198 2.87e-20 89.0
Msa0747500 MtrunA17_Chr3g0082651 33.178 214 111 9 262 466 11 201 1.06e-19 87.4
Msa0747500 MtrunA17_Chr3g0082681 35.263 190 99 8 286 466 27 201 1.19e-19 87.0
Msa0747500 MtrunA17_Chr3g0082641 34.737 190 100 8 286 466 27 201 2.59e-19 86.3
Msa0747500 MtrunA17_Chr3g0082671 35.417 192 96 9 286 466 27 201 2.77e-19 85.9
Msa0747500 MtrunA17_Chr3g0082661 34.737 190 100 8 286 466 27 201 3.33e-19 85.9
Msa0747500 MtrunA17_Chr2g0314441 34.426 183 94 8 279 456 25 186 3.95e-19 85.5
Msa0747500 MtrunA17_Chr1g0173431 33.333 207 116 8 267 466 8 199 6.92e-19 84.7
Msa0747500 MtrunA17_Chr3g0137411 33.488 215 108 9 262 466 8 197 1.16e-18 84.3
Msa0747500 MtrunA17_Chr4g0022751 31.884 207 120 8 267 466 8 200 3.49e-18 82.8
Msa0747500 MtrunA17_Chr3g0137441 28.767 219 123 8 260 469 6 200 3.58e-18 83.2
Msa0747500 MtrunA17_Chr4g0022761 32.212 208 114 9 267 466 8 196 5.46e-18 82.0
Msa0747500 MtrunA17_Chr8g0359161 34.574 188 102 9 286 466 29 202 4.83e-17 79.7
Msa0747500 MtrunA17_Chr8g0359111 30.435 207 123 7 267 466 8 200 7.29e-17 79.0
Msa0747500 MtrunA17_Chr7g0269461 33.708 178 95 10 286 456 27 188 5.95e-14 70.5
Msa0747500 MtrunA17_Chr6g0476921 30.808 198 111 8 281 469 23 203 3.91e-13 68.6
Msa0747500 MtrunA17_Chr2g0314431 31.868 182 104 7 279 458 25 188 5.68e-11 62.0
Msa0747500 MtrunA17_Chr6g0452521 26.667 240 155 7 232 465 8 232 7.40e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0747500 AT1G17860.1 45.933 209 91 7 260 466 5 193 1.78e-47 162
Msa0747500 AT1G17860.1 28.916 166 78 5 4 139 2 157 2.53e-12 66.2
Msa0747500 AT1G73260.1 33.953 215 120 8 258 468 9 205 1.28e-22 96.3
Msa0747500 AT1G73325.1 32.558 215 119 11 261 468 8 203 2.12e-16 78.6

Find 134 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTAATAACACCTTTCTT+AGG 0.178129 5_1:-71904376 None:intergenic
GCAGGAATGTTGGGGTCTTT+AGG 0.226794 5_1:+71904629 Msa0747500:CDS
GACACGAATATCACCTTTAA+TGG 0.240870 5_1:-71897359 None:intergenic
ACTCTTCACATGCTGTATTA+AGG 0.241608 5_1:-71904426 None:intergenic
CAGGAATGTTGGGGTCTTTA+GGG 0.264531 5_1:+71904630 Msa0747500:CDS
ACCCTAAGAAAGGTGTTATT+AGG 0.266748 5_1:+71904374 Msa0747500:CDS
CTAAGGTTTGCACCCATTAA+AGG 0.268093 5_1:+71897346 Msa0747500:intron
GTGACCACTAATGGTATATT+AGG 0.274148 5_1:+71897484 Msa0747500:CDS
ACAAAGCCACATATTGTAAA+TGG 0.283069 5_1:-71900635 None:intergenic
AATGTTTCTTCTTTAGAAAA+AGG 0.285974 5_1:-71900878 None:intergenic
ACACCTTTCTTAGGGTTAAC+AGG 0.290681 5_1:-71904367 None:intergenic
GAAGATTGATCCTTCTTCTA+AGG 0.319535 5_1:+71897450 Msa0747500:CDS
CCCTAAGAAAGGTGTTATTA+GGG 0.319854 5_1:+71904375 Msa0747500:CDS
CACACTACTGAATAGTTATA+AGG 0.321277 5_1:-71897427 None:intergenic
GTCACTACCGGTGGGGTTCT+TGG 0.322883 5_1:+71904499 Msa0747500:CDS
AGCCGGAATGATGTAGTAAT+TGG 0.358723 5_1:-71900609 None:intergenic
AGTCAAGTCTTTGACATAAC+CGG 0.369764 5_1:+71897187 Msa0747500:CDS
ATTGTCAACGGTGTCCTTGC+CGG 0.371760 5_1:-71904527 None:intergenic
CTCAATGTTGTAGTGGTTGA+GGG 0.376701 5_1:+71904316 Msa0747500:CDS
GACCGTCACATGGGGTTGTC+GGG 0.380454 5_1:-71904228 None:intergenic
CTGATGTGCCATACAAAGTT+AGG 0.386416 5_1:+71904683 Msa0747500:CDS
AACGCCTTTCTTGTTGTTAA+CGG 0.386453 5_1:-71900765 None:intergenic
AGCTTCTCCGAGCAAGGGTT+GGG 0.386871 5_1:-71904128 None:intergenic
ATCAGTTCGAAGCTTCTTCC+CGG 0.395949 5_1:-71897206 None:intergenic
CTCTTCACATGCTGTATTAA+GGG 0.397035 5_1:-71904425 None:intergenic
GCAACATTTGTGACCACTAA+TGG 0.399420 5_1:+71897475 Msa0747500:CDS
GTGACTACTAATGGTGTATT+GGG 0.404413 5_1:+71900902 Msa0747500:CDS
ACGCCTTTCTTGTTGTTAAC+GGG 0.404872 5_1:-71900764 None:intergenic
GGTTGACACAGAAGGCAAAA+AGG 0.410166 5_1:+71904171 Msa0747500:CDS
AGGTCATGTGCAGGAATGTT+GGG 0.410673 5_1:+71904620 Msa0747500:CDS
CCCTAATAACACCTTTCTTA+GGG 0.414565 5_1:-71904375 None:intergenic
GAAACATTTGTGACTACTAA+TGG 0.419288 5_1:+71900893 Msa0747500:CDS
ACTCAATGTTGTAGTGGTTG+AGG 0.421669 5_1:+71904315 Msa0747500:CDS
GCTAAGCCATTTACAATATG+TGG 0.430563 5_1:+71900629 Msa0747500:CDS
CGCCGGGATGATGTAGTAAT+CGG 0.437166 5_1:-71897230 None:intergenic
GCAAGGACACCGTTGACAAT+TGG 0.438091 5_1:+71904530 Msa0747500:CDS
TTGTCAACGGTGTCCTTGCC+GGG 0.438512 5_1:-71904526 None:intergenic
TGTGACTACTAATGGTGTAT+TGG 0.442930 5_1:+71900901 Msa0747500:CDS
TTGTCTTCGCAACCACTACT+TGG 0.447050 5_1:+71900524 Msa0747500:CDS
GGGTCTTTAGGGATAGTAAT+GGG 0.453756 5_1:+71904641 Msa0747500:CDS
GGTTGGAACCTAACTTTGTA+TGG 0.454358 5_1:-71904691 None:intergenic
CAGCTTCTCCGAGCAAGGGT+TGG 0.454758 5_1:-71904129 None:intergenic
TACCAATTACTACATCATTC+CGG 0.457107 5_1:+71900607 Msa0747500:CDS
GTTCGAATTCAATTCATAGT+TGG 0.461077 5_1:+71897515 Msa0747500:CDS
TCACATGGGGTTGTCGGGAC+TGG 0.470206 5_1:-71904223 None:intergenic
ACAACCCCATGTGACGGTCG+TGG 0.470483 5_1:+71904232 Msa0747500:CDS
GGGCCTTGTGTTGTCGGTAG+TGG 0.472611 5_1:+71904253 Msa0747500:CDS
GGTCGTGGGCCTTGTGTTGT+CGG 0.474565 5_1:+71904247 Msa0747500:CDS
CGACCGTCACATGGGGTTGT+CGG 0.478237 5_1:-71904229 None:intergenic
ACACGAATATCACCTTTAAT+GGG 0.478775 5_1:-71897358 None:intergenic
CATATTGTAAATGGCTTAGC+CGG 0.479615 5_1:-71900626 None:intergenic
ACCCCTGTTAACCCTAAGAA+AGG 0.480020 5_1:+71904364 Msa0747500:CDS
CACCTTTCTTAGGGTTAACA+GGG 0.482056 5_1:-71904366 None:intergenic
TCTGTGTCAACCACTTGCTC+AGG 0.489109 5_1:-71904160 None:intergenic
TTGTCCACCCAACCCTTGCT+CGG 0.489235 5_1:+71904121 Msa0747500:CDS
CGATGTGTCAATGACTTGAT+CGG 0.502159 5_1:-71900564 None:intergenic
AAATATCTCCACCATTCGCC+GGG 0.505714 5_1:-71897246 None:intergenic
GAACTTTATGTTGAGATCAG+TGG 0.505826 5_1:-71900798 None:intergenic
CTATGAATTGAATTCGAACC+CGG 0.505952 5_1:-71897511 None:intergenic
TACTACATCATCCCGGCGAA+TGG 0.506747 5_1:+71897235 Msa0747500:CDS
TTGAGTGGACATGTCTCGTT+TGG 0.518641 5_1:-71904298 None:intergenic
CATGTGAAGAGTCCACGATA+TGG 0.519311 5_1:+71904437 Msa0747500:CDS
GTGACCTAATATACCATTAG+TGG 0.521680 5_1:-71897488 None:intergenic
AAATACTTCAAGCAGATGGT+TGG 0.522101 5_1:-71904708 None:intergenic
GAAATATCTCCACCATTCGC+CGG 0.523535 5_1:-71897247 None:intergenic
AGCGTCAGCTTCTCCGAGCA+AGG 0.525965 5_1:-71904134 None:intergenic
ATGGGGTTGTCGGGACTGGT+CGG 0.526887 5_1:-71904219 None:intergenic
ATTTCCCTTGAAAGTTCTAT+CGG 0.528904 5_1:+71897265 Msa0747500:intron
TTGAAAATACTTCAAGCAGA+TGG 0.530226 5_1:-71904712 None:intergenic
CAAGGCCCACGACCGTCACA+TGG 0.530644 5_1:-71904238 None:intergenic
AGGATCAATCTTCCACACTA+AGG 0.534325 5_1:-71900858 None:intergenic
GTATGATGATGCTTATAAGT+TGG 0.537055 5_1:+71897552 Msa0747500:CDS
ACTGATCTCAATATTATGCT+AGG 0.539300 5_1:+71897385 Msa0747500:CDS
AATGTTGCTACCTTAGAAGA+AGG 0.539472 5_1:-71897460 None:intergenic
ATAATCAAGGTTTACCGTTG+AGG 0.542322 5_1:+71900735 Msa0747500:intron
TTCCACACTAAGGAATGGTT+AGG 0.542536 5_1:-71900848 None:intergenic
GAGCAAGGGTTGGGTGGACA+AGG 0.544353 5_1:-71904119 None:intergenic
AAGGTCATGTGCAGGAATGT+TGG 0.544552 5_1:+71904619 Msa0747500:CDS
GATGTGTCAATGACTTGATC+GGG 0.551157 5_1:-71900563 None:intergenic
TAATGGTGTATTGGGAAACC+CGG 0.551726 5_1:+71900910 Msa0747500:CDS
GGTGGGGTTCTTGGAAATCC+CGG 0.552765 5_1:+71904508 Msa0747500:CDS
TTGATTCCTCATCTGGACAA+TGG 0.554639 5_1:+71904473 Msa0747500:CDS
ATCATCAAGCGTCCATATCG+TGG 0.559535 5_1:-71904449 None:intergenic
CAATGGTTTGTCACTACCGG+TGG 0.561342 5_1:+71904490 Msa0747500:CDS
CAACCCCATGTGACGGTCGT+GGG 0.563780 5_1:+71904233 Msa0747500:CDS
AATGGTTTGTCACTACCGGT+GGG 0.564160 5_1:+71904491 Msa0747500:CDS
GGACAATGGTTTGTCACTAC+CGG 0.566652 5_1:+71904487 Msa0747500:CDS
AAGGCCCACGACCGTCACAT+GGG 0.567219 5_1:-71904237 None:intergenic
GTCCTAACCATTCCTTAGTG+TGG 0.567409 5_1:+71900846 Msa0747500:CDS
TAATGGTATATTAGGTCACC+CGG 0.568418 5_1:+71897492 Msa0747500:CDS
CTTATAACTATTCAGTAGTG+TGG 0.568951 5_1:+71897428 Msa0747500:CDS
GCTTTAGATAATACAAGTAG+TGG 0.569760 5_1:-71897157 None:intergenic
TGTCTTGATGTTAAGATCAG+TGG 0.570079 5_1:-71904401 None:intergenic
AAACCACTACCGACAACACA+AGG 0.571628 5_1:-71904256 None:intergenic
TGCTAGGTAATGCTGATGAT+AGG 0.573028 5_1:+71897401 Msa0747500:CDS
TGACGCTTCACCTGAGCAAG+TGG 0.575987 5_1:+71904150 Msa0747500:CDS
ACACCCGTTAACAACAAGAA+AGG 0.576147 5_1:+71900761 Msa0747500:CDS
TTCACAACTACTACATGAAG+AGG 0.579250 5_1:-71897298 None:intergenic
AATCTTGAACCAATTGTCAA+CGG 0.580218 5_1:-71904539 None:intergenic
TAGCATAATATTGAGATCAG+TGG 0.581881 5_1:-71897383 None:intergenic
GTCAAGTCTTTGACATAACC+GGG 0.583783 5_1:+71897188 Msa0747500:CDS
GATCAAGTCATTGACACATC+GGG 0.588958 5_1:+71900566 Msa0747500:CDS
GGGGTCTTTAGGGATAGTAA+TGG 0.589720 5_1:+71904640 Msa0747500:CDS
CAATCTTCCACACTAAGGAA+TGG 0.596624 5_1:-71900853 None:intergenic
TTCTCCGAGCAAGGGTTGGG+TGG 0.598373 5_1:-71904125 None:intergenic
GTGAGGACAATGCAAGGAGA+AGG 0.606680 5_1:-71897132 None:intergenic
GACAAACCATTGTCCAGATG+AGG 0.609229 5_1:-71904479 None:intergenic
GTCCCGACAACCCCATGTGA+CGG 0.611299 5_1:+71904226 Msa0747500:CDS
TGCAGAAATCACATACCGTA+GGG 0.614159 5_1:-71904597 None:intergenic
GCTTCAGTTGATCCAAGTAG+TGG 0.616203 5_1:-71900536 None:intergenic
CGATCAAGTCATTGACACAT+CGG 0.616565 5_1:+71900565 Msa0747500:CDS
GCGTCAGCTTCTCCGAGCAA+GGG 0.616662 5_1:-71904133 None:intergenic
TCAACCACTACAACATTGAG+TGG 0.618412 5_1:-71904313 None:intergenic
GGTCATGTGCAGGAATGTTG+GGG 0.620344 5_1:+71904621 Msa0747500:CDS
TTAACGGGTGTGAACCTCAA+CGG 0.621698 5_1:-71900749 None:intergenic
GAGCAAGTGGTTGACACAGA+AGG 0.621958 5_1:+71904163 Msa0747500:CDS
ATTTCTGCAAGGTCATGTGC+AGG 0.628252 5_1:+71904611 Msa0747500:CDS
TTGCAGAAATCACATACCGT+AGG 0.628538 5_1:-71904598 None:intergenic
TAATACAAGTAGTGGTTGTG+AGG 0.628930 5_1:-71897149 None:intergenic
TACGGTATGTGATTTCTGCA+AGG 0.630885 5_1:+71904600 Msa0747500:CDS
GGGATTTCCAAGAACCCCAC+CGG 0.635438 5_1:-71904506 None:intergenic
TTCCGATTACTACATCATCC+CGG 0.664164 5_1:+71897228 Msa0747500:CDS
TCACAACTACTACATGAAGA+GGG 0.665709 5_1:-71897297 None:intergenic
AATGGTGTATTGGGAAACCC+GGG 0.666072 5_1:+71900911 Msa0747500:CDS
ATGTCCACTCAATGTTGTAG+TGG 0.670052 5_1:+71904309 Msa0747500:CDS
GTGGTTGTGAGGACAATGCA+AGG 0.673338 5_1:-71897138 None:intergenic
TAGTAATGGGAACCAGCGTG+TGG 0.674297 5_1:+71904654 Msa0747500:CDS
ATGGTTTGTCACTACCGGTG+GGG 0.675340 5_1:+71904492 Msa0747500:CDS
ACCTTTCTTAGGGTTAACAG+GGG 0.679673 5_1:-71904365 None:intergenic
CATCAGTGAGAGCCACACGC+TGG 0.681901 5_1:-71904666 None:intergenic
GGTTCTTGGAAATCCCGGCA+AGG 0.687124 5_1:+71904513 Msa0747500:CDS
TCGGATGTAGTAGTCTACTC+CGG 0.689014 5_1:-71904200 None:intergenic
AATGGTATATTAGGTCACCC+GGG 0.693227 5_1:+71897493 Msa0747500:CDS
TATGAATTGAATTCGAACCC+GGG 0.700679 5_1:-71897510 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAAATTATAATTATTT+TGG + chr5_1:71898863-71898882 Msa0747500:intron 0.0%
!!! TAAAAAATTATAATTATTTT+GGG + chr5_1:71898864-71898883 Msa0747500:intron 0.0%
!! AAAATCATTAAAAAATATGA+AGG - chr5_1:71898712-71898731 None:intergenic 10.0%
!!! TTAATGATTTTTTTTAGAAA+TGG + chr5_1:71898721-71898740 Msa0747500:intron 10.0%
!!! TAATGATTTTTTTTAGAAAT+GGG + chr5_1:71898722-71898741 Msa0747500:intron 10.0%
!! AATTTCAATAAAAAATATGA+AGG + chr5_1:71898922-71898941 Msa0747500:intron 10.0%
!! GATTCAAAATAAAATAATTA+AGG - chr5_1:71899091-71899110 None:intergenic 10.0%
!!! TAATTTATTATTTTAACACT+CGG - chr5_1:71899958-71899977 None:intergenic 10.0%
!!! ATATATTTTTATTCTTTACA+AGG - chr5_1:71901195-71901214 None:intergenic 10.0%
!!! TAAGTAAAATTAGTTTTTTT+TGG - chr5_1:71901447-71901466 None:intergenic 10.0%
!!! TGTTTATCTTTTTTTTTTTT+TGG - chr5_1:71901829-71901848 None:intergenic 10.0%
!! GATTTATAAGTATAAGAATA+GGG + chr5_1:71897627-71897646 Msa0747500:intron 15.0%
!!! ACAAATGTTATAATTTTATG+AGG + chr5_1:71897731-71897750 Msa0747500:intron 15.0%
!!! TAGAGTAATTTCATTTTAAT+TGG - chr5_1:71897989-71898008 None:intergenic 15.0%
!! ATTCATTTATTATGTATGAA+AGG + chr5_1:71898476-71898495 Msa0747500:intron 15.0%
!! ATTAATTATTGGGTTAAATA+AGG + chr5_1:71898561-71898580 Msa0747500:intron 15.0%
!!! ATTTGATGTATGAAATTTTT+TGG - chr5_1:71898657-71898676 None:intergenic 15.0%
!!! AACAATTCTAATTCTTTTTT+CGG - chr5_1:71898770-71898789 None:intergenic 15.0%
!!! AATATGACTTTTTATGTTTT+TGG - chr5_1:71898828-71898847 None:intergenic 15.0%
!! TAAAAAAAAACACTAAATCA+TGG + chr5_1:71899832-71899851 Msa0747500:intron 15.0%
!!! GTTGTATACATTTTTTTTTA+AGG - chr5_1:71899895-71899914 None:intergenic 15.0%
!!! AATTTATTATTTTAACACTC+GGG - chr5_1:71899957-71899976 None:intergenic 15.0%
!! CAACAATTAATAATAAATGT+TGG + chr5_1:71900292-71900311 Msa0747500:intron 15.0%
!!! TTATTTTTGTTCTAAAGTAT+TGG + chr5_1:71901272-71901291 Msa0747500:intron 15.0%
!! AACAAATACTAATTATTTGA+AGG + chr5_1:71901364-71901383 Msa0747500:intron 15.0%
!! ACATGAATGATTATAAATAT+AGG - chr5_1:71901507-71901526 None:intergenic 15.0%
!!! TCTTTTTCTTATAAAGTAAA+GGG - chr5_1:71902005-71902024 None:intergenic 15.0%
!! AATCTCAATATAATGAATTA+GGG + chr5_1:71902301-71902320 Msa0747500:intron 15.0%
!!! GTATATATGTATTTTACTTT+GGG - chr5_1:71902812-71902831 None:intergenic 15.0%
!!! AAACAAATAATTTTTTGTGT+TGG - chr5_1:71903641-71903660 None:intergenic 15.0%
!! GGATTTATAAGTATAAGAAT+AGG + chr5_1:71897626-71897645 Msa0747500:intron 20.0%
!!! ATATATTTTTATTCTCCACA+AGG - chr5_1:71897775-71897794 None:intergenic 20.0%
!!! GATTTTAAAAAAACTAGCAA+AGG - chr5_1:71898337-71898356 None:intergenic 20.0%
!!! ATACCTCTAAAATATTTCTT+AGG + chr5_1:71898619-71898638 Msa0747500:intron 20.0%
!!! TATTGAAATTTTTCAGACAT+GGG - chr5_1:71898912-71898931 None:intergenic 20.0%
!!! TTATTGAAATTTTTCAGACA+TGG - chr5_1:71898913-71898932 None:intergenic 20.0%
!! TTAAAATCAAATGGTTAAGA+TGG + chr5_1:71898974-71898993 Msa0747500:intron 20.0%
!!! TAAAACATTCTTTAGGTTTT+TGG - chr5_1:71899014-71899033 None:intergenic 20.0%
!!! AAAAACCTAAAGAATGTTTT+AGG + chr5_1:71899013-71899032 Msa0747500:intron 20.0%
!!! AAAACCTAAAGAATGTTTTA+GGG + chr5_1:71899014-71899033 Msa0747500:intron 20.0%
!! AATCAAATGTTGGTATATTT+AGG + chr5_1:71899044-71899063 Msa0747500:intron 20.0%
!! TAAGAATTTAAATGAGTTGT+GGG - chr5_1:71899438-71899457 None:intergenic 20.0%
!! TTAAACTAAGAAAGCAAAAA+GGG - chr5_1:71899561-71899580 None:intergenic 20.0%
!! ATTAAACTAAGAAAGCAAAA+AGG - chr5_1:71899562-71899581 None:intergenic 20.0%
!!! TCTTTTTACTACTATAGAAA+GGG - chr5_1:71899588-71899607 None:intergenic 20.0%
!!! ATCTTTTTACTACTATAGAA+AGG - chr5_1:71899589-71899608 None:intergenic 20.0%
!! GAAACTAAAATTAAGAAAGA+AGG - chr5_1:71899619-71899638 None:intergenic 20.0%
!!! TATTTTATCAAATAGTCTTG+TGG - chr5_1:71899809-71899828 None:intergenic 20.0%
!!! ATTTTAGTTTGCTCTAAATA+TGG - chr5_1:71900053-71900072 None:intergenic 20.0%
!! ATAAAAATGTTACTAGTACT+TGG - chr5_1:71900192-71900211 None:intergenic 20.0%
!!! AATGTTTCTTCTTTAGAAAA+AGG - chr5_1:71900881-71900900 None:intergenic 20.0%
!!! TTCTGAAACTTAACTTTAAA+GGG - chr5_1:71901097-71901116 None:intergenic 20.0%
!! GTGCATATATTCAAAAAATA+TGG - chr5_1:71901394-71901413 None:intergenic 20.0%
!! TATATATTGTTTGCATTTGA+AGG + chr5_1:71901741-71901760 Msa0747500:intron 20.0%
!!! GGAGTAATAAATTTAACTTT+AGG - chr5_1:71901889-71901908 None:intergenic 20.0%
!!! GTCTTTTTCTTATAAAGTAA+AGG - chr5_1:71902006-71902025 None:intergenic 20.0%
!! CAATCTCAATATAATGAATT+AGG + chr5_1:71902300-71902319 Msa0747500:intron 20.0%
!! ATCTCAATATAATGAATTAG+GGG + chr5_1:71902302-71902321 Msa0747500:intron 20.0%
!! GTGTACATCATAAAATTAAA+GGG - chr5_1:71902468-71902487 None:intergenic 20.0%
!! TGTGTACATCATAAAATTAA+AGG - chr5_1:71902469-71902488 None:intergenic 20.0%
!! CAAAACACATTAAAACATTT+CGG + chr5_1:71902680-71902699 Msa0747500:intron 20.0%
!!! GGTATATATGTATTTTACTT+TGG - chr5_1:71902813-71902832 None:intergenic 20.0%
!! CTGAAATGAAATAATCAAAT+TGG - chr5_1:71903783-71903802 None:intergenic 20.0%
!! ATTGATTGTATTGGAAATTA+TGG - chr5_1:71903827-71903846 None:intergenic 20.0%
!!! CTTTGTAAATTTGTATTGAT+GGG - chr5_1:71904032-71904051 None:intergenic 20.0%
!! TCTTTGTAAATTTGTATTGA+TGG - chr5_1:71904033-71904052 None:intergenic 20.0%
!!! TAATATGTATACTGATTTCA+TGG - chr5_1:71904083-71904102 None:intergenic 20.0%
! TGGAAATTAAGCTTTACTAA+TGG + chr5_1:71897706-71897725 Msa0747500:intron 25.0%
! GTGATCTAATATAACTTCAA+GGG - chr5_1:71897892-71897911 None:intergenic 25.0%
! TGTGATCTAATATAACTTCA+AGG - chr5_1:71897893-71897912 None:intergenic 25.0%
!! ATGTATCAAAAAAGGTATGT+TGG - chr5_1:71898307-71898326 None:intergenic 25.0%
! GACTTCTAATGTATCAAAAA+AGG - chr5_1:71898315-71898334 None:intergenic 25.0%
! TGCTAAAACTATAGGATATT+TGG - chr5_1:71898411-71898430 None:intergenic 25.0%
! AACTACAATGCTAAAACTAT+AGG - chr5_1:71898419-71898438 None:intergenic 25.0%
! TATTGGGTTAAATAAGGAAA+TGG + chr5_1:71898567-71898586 Msa0747500:intron 25.0%
!! GAGGTATTAAAATCAAATGT+TGG - chr5_1:71898606-71898625 None:intergenic 25.0%
!!! ATGCCTAAGAAATATTTTAG+AGG - chr5_1:71898625-71898644 None:intergenic 25.0%
! TAAAATATTTCTTAGGCATG+TGG + chr5_1:71898626-71898645 Msa0747500:intron 25.0%
! AAAATATTTCTTAGGCATGT+GGG + chr5_1:71898627-71898646 Msa0747500:intron 25.0%
!!! GATGTATGAAATTTTTTGGA+GGG - chr5_1:71898653-71898672 None:intergenic 25.0%
!!! TGATGTATGAAATTTTTTGG+AGG - chr5_1:71898654-71898673 None:intergenic 25.0%
!!! ACATGAGTTGATTAAAAAGT+AGG + chr5_1:71898949-71898968 Msa0747500:intron 25.0%
!!! CATGAGTTGATTAAAAAGTA+GGG + chr5_1:71898950-71898969 Msa0747500:intron 25.0%
! AAGTAGGGATTAAAATCAAA+TGG + chr5_1:71898965-71898984 Msa0747500:intron 25.0%
!! GTTAAGATGGAAAATTTTAG+AGG + chr5_1:71898987-71899006 Msa0747500:intron 25.0%
!!! AAACCTAAAGAATGTTTTAG+GGG + chr5_1:71899015-71899034 Msa0747500:intron 25.0%
! AAGTTAAAAGACTAAGTTGT+TGG + chr5_1:71899118-71899137 Msa0747500:intron 25.0%
! AAGAATTTAAATGAGTTGTG+GGG - chr5_1:71899437-71899456 None:intergenic 25.0%
! CTAAGAATTTAAATGAGTTG+TGG - chr5_1:71899439-71899458 None:intergenic 25.0%
! TGTTTATTCTTAACCATTGT+AGG + chr5_1:71899524-71899543 Msa0747500:intron 25.0%
! GTTTATTCTTAACCATTGTA+GGG + chr5_1:71899525-71899544 Msa0747500:intron 25.0%
! TAAACTAAGAAAGCAAAAAG+GGG - chr5_1:71899560-71899579 None:intergenic 25.0%
!! CTTTTTACTACTATAGAAAG+GGG - chr5_1:71899587-71899606 None:intergenic 25.0%
! AAAAAATTATGTTGTCCTCA+TGG + chr5_1:71899703-71899722 Msa0747500:intron 25.0%
!! TCTTTTAGTGTGAATAAGTA+AGG - chr5_1:71899776-71899795 None:intergenic 25.0%
! ACATCTTAGTATAAGACTTT+GGG + chr5_1:71900159-71900178 Msa0747500:intron 25.0%
! GGTAATGAATGAATATATGA+TGG - chr5_1:71900422-71900441 None:intergenic 25.0%
!!! TGTTGATTTTGTGTTTGTTT+TGG - chr5_1:71900443-71900462 None:intergenic 25.0%
!! TTTGTTAGTTGTTTCAATAG+TGG + chr5_1:71900653-71900672 Msa0747500:intron 25.0%
! AATTTACGTGTATAAGACTA+GGG + chr5_1:71901045-71901064 Msa0747500:intron 25.0%
!!! CTTCTGAAACTTAACTTTAA+AGG - chr5_1:71901098-71901117 None:intergenic 25.0%
!!! CTTTAAAGTTAAGTTTCAGA+AGG + chr5_1:71901096-71901115 Msa0747500:intron 25.0%
! ACTTAGAATTTCTTTATCAC+TGG - chr5_1:71901142-71901161 None:intergenic 25.0%
! AAATTCTAAGTGTGCTTATA+AGG + chr5_1:71901151-71901170 Msa0747500:intron 25.0%
!!! ATTAGTTTTTTTTGGCTAGT+TGG - chr5_1:71901439-71901458 None:intergenic 25.0%
!!! ATAAACACACTTCTCTTTTT+TGG + chr5_1:71901784-71901803 Msa0747500:intron 25.0%
!!! TAAACACACTTCTCTTTTTT+GGG + chr5_1:71901785-71901804 Msa0747500:intron 25.0%
!!! TTTTTTTTTGGTACAAGAGA+GGG - chr5_1:71901817-71901836 None:intergenic 25.0%
!!! TTTTTTTTTTGGTACAAGAG+AGG - chr5_1:71901818-71901837 None:intergenic 25.0%
!! ATAAATTTAACTTTAGGTGC+TGG - chr5_1:71901883-71901902 None:intergenic 25.0%
! TAATATATACTACGTTTAGC+AGG + chr5_1:71902185-71902204 Msa0747500:intron 25.0%
! GAAAGAAAAAAAAAAGAGTC+AGG - chr5_1:71902359-71902378 None:intergenic 25.0%
!!! AGAGATTTTGTTTTTAAGTC+AGG - chr5_1:71902397-71902416 None:intergenic 25.0%
!! ACATTGAGCAAGTTTAATTT+GGG + chr5_1:71902486-71902505 Msa0747500:intron 25.0%
! AAAAAATTGTGAACAGTTGA+AGG - chr5_1:71902567-71902586 None:intergenic 25.0%
!!! AATGTTTTAATGTGTTTTGG+AGG - chr5_1:71902679-71902698 None:intergenic 25.0%
!!! CGAAATGTTTTAATGTGTTT+TGG - chr5_1:71902682-71902701 None:intergenic 25.0%
! TGGAAATGAGTAATACAATT+TGG + chr5_1:71903345-71903364 Msa0747500:intron 25.0%
! GGAAATGAGTAATACAATTT+GGG + chr5_1:71903346-71903365 Msa0747500:intron 25.0%
!! TTTCATGTGGATATTTTGTT+TGG - chr5_1:71903404-71903423 None:intergenic 25.0%
!!! TTTTTAAGAGAGATTTTGGT+GGG - chr5_1:71903467-71903486 None:intergenic 25.0%
! ATCATAGATTCATAGGTATA+TGG - chr5_1:71903510-71903529 None:intergenic 25.0%
!!! CAAATAATTTTTTGTGTTGG+TGG - chr5_1:71903638-71903657 None:intergenic 25.0%
! AGAAAAAAAGTCATACATGT+TGG + chr5_1:71903674-71903693 Msa0747500:intron 25.0%
! TTGTATTGGAAATTATGGTT+TGG - chr5_1:71903822-71903841 None:intergenic 25.0%
! TCAGCATTAATTGATTGTAT+TGG - chr5_1:71903836-71903855 None:intergenic 25.0%
! AACAAAGAAACTTTATGAGT+TGG + chr5_1:71903897-71903916 Msa0747500:intron 25.0%
!! AATGATGTGATCTAAAACTA+TGG - chr5_1:71903975-71903994 None:intergenic 25.0%
! GCTTTAGATAATACAAGTAG+TGG - chr5_1:71897160-71897179 None:intergenic 30.0%
ATTTCCCTTGAAAGTTCTAT+CGG + chr5_1:71897265-71897284 Msa0747500:intron 30.0%
ACACGAATATCACCTTTAAT+GGG - chr5_1:71897361-71897380 None:intergenic 30.0%
TAGCATAATATTGAGATCAG+TGG - chr5_1:71897386-71897405 None:intergenic 30.0%
ACTGATCTCAATATTATGCT+AGG + chr5_1:71897385-71897404 Msa0747500:CDS 30.0%
CACACTACTGAATAGTTATA+AGG - chr5_1:71897430-71897449 None:intergenic 30.0%
CTTATAACTATTCAGTAGTG+TGG + chr5_1:71897428-71897447 Msa0747500:CDS 30.0%
GTTCGAATTCAATTCATAGT+TGG + chr5_1:71897515-71897534 Msa0747500:CDS 30.0%
! GTATGATGATGCTTATAAGT+TGG + chr5_1:71897552-71897571 Msa0747500:CDS 30.0%
TAAGAATAGGGAAATACGTT+TGG + chr5_1:71897639-71897658 Msa0747500:intron 30.0%
!! ATTGAGTTTGATTTTCCTTG+TGG + chr5_1:71897757-71897776 Msa0747500:intron 30.0%
! TAATTAGTCTCCACAATTAC+TGG - chr5_1:71897867-71897886 None:intergenic 30.0%
GAAATTACTCTAGTCATTGT+TGG + chr5_1:71897997-71898016 Msa0747500:intron 30.0%
! AGAGAGGATGATTTTTAACA+TGG + chr5_1:71898086-71898105 Msa0747500:intron 30.0%
AGTACACATAGTGATATGAT+TGG - chr5_1:71898133-71898152 None:intergenic 30.0%
! GAAGATGTTGTTAAGTTGTT+TGG - chr5_1:71898208-71898227 None:intergenic 30.0%
GGAATACTTTGATACATTAG+AGG - chr5_1:71898260-71898279 None:intergenic 30.0%
GATATTCAAGAGATTTGAGA+TGG - chr5_1:71898281-71898300 None:intergenic 30.0%
CAATGTCTAAACATAAGTGT+TGG + chr5_1:71898516-71898535 Msa0747500:intron 30.0%
TCAAATGTTGGTGTATTTAG+AGG - chr5_1:71898594-71898613 None:intergenic 30.0%
!! AACCTAAAGAATGTTTTAGG+GGG + chr5_1:71899016-71899035 Msa0747500:intron 30.0%
CAAATGTTGGTATATTTAGG+AGG + chr5_1:71899047-71899066 Msa0747500:intron 30.0%
! TTGATTTTGTGAGGTTGTAT+TGG - chr5_1:71899252-71899271 None:intergenic 30.0%
!! TTCACAAAGTTGATTTTGTG+AGG - chr5_1:71899261-71899280 None:intergenic 30.0%
AAACTAAGAAAGCAAAAAGG+GGG - chr5_1:71899559-71899578 None:intergenic 30.0%
TATATGACCAAGTCAGTTTA+TGG + chr5_1:71899990-71900009 Msa0747500:intron 30.0%
CACATCTTAGTATAAGACTT+TGG + chr5_1:71900158-71900177 Msa0747500:intron 30.0%
! ATAGCAACCATAGATTTTGA+AGG + chr5_1:71900240-71900259 Msa0747500:intron 30.0%
TACCAATTACTACATCATTC+CGG + chr5_1:71900607-71900626 Msa0747500:CDS 30.0%
ACAAAGCCACATATTGTAAA+TGG - chr5_1:71900638-71900657 None:intergenic 30.0%
GTAGTTGTGAAACATAATCA+AGG + chr5_1:71900722-71900741 Msa0747500:intron 30.0%
GAAACATTTGTGACTACTAA+TGG + chr5_1:71900893-71900912 Msa0747500:CDS 30.0%
GTTCAAATACAATCCACAAT+TGG + chr5_1:71900933-71900952 Msa0747500:intron 30.0%
CATCTTCATACTTCTCAATT+TGG - chr5_1:71900961-71900980 None:intergenic 30.0%
GTATGAAGATGCTTATAAGT+TGG + chr5_1:71900970-71900989 Msa0747500:intron 30.0%
AACCATGTATGCAAAGATAT+TGG + chr5_1:71901022-71901041 Msa0747500:intron 30.0%
TTCCAATATCTTTGCATACA+TGG - chr5_1:71901027-71901046 None:intergenic 30.0%
GAATTTACGTGTATAAGACT+AGG + chr5_1:71901044-71901063 Msa0747500:intron 30.0%
! AGTATTGGAATATCTCCTAA+CGG + chr5_1:71901287-71901306 Msa0747500:intron 30.0%
!! CGGTTTTTAAGCATGATATT+GGG - chr5_1:71901636-71901655 None:intergenic 30.0%
! TGAAATTAGTCTCCCAAATT+AGG - chr5_1:71901659-71901678 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr5_1:71902136-71902155 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr5_1:71901915-71901934 Msa0747500:intron 30.0%
ATATTGTGTGAGAGAAAAGT+TGG + chr5_1:71902045-71902064 Msa0747500:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr5_1:71902136-71902155 Msa0747500:intron 30.0%
CACATTGAGCAAGTTTAATT+TGG + chr5_1:71902485-71902504 Msa0747500:intron 30.0%
GCAACATATACATATAAGCT+TGG + chr5_1:71902508-71902527 Msa0747500:intron 30.0%
TACATATAAGCTTGGTTGAT+TGG + chr5_1:71902516-71902535 Msa0747500:intron 30.0%
TTCAGATTATAGAATCCGAA+CGG + chr5_1:71902634-71902653 Msa0747500:intron 30.0%
CAGAATTCATGGGAATAAAT+TGG - chr5_1:71902762-71902781 None:intergenic 30.0%
! GGCATAATTGTCATTTACTT+TGG + chr5_1:71903325-71903344 Msa0747500:intron 30.0%
!! TTTTGTTTGGTAGAAGGAAT+GGG - chr5_1:71903391-71903410 None:intergenic 30.0%
!! ATTTTGTTTGGTAGAAGGAA+TGG - chr5_1:71903392-71903411 None:intergenic 30.0%
!! TGGATATTTTGTTTGGTAGA+AGG - chr5_1:71903397-71903416 None:intergenic 30.0%
!! GTTTTTAAGAGAGATTTTGG+TGG - chr5_1:71903468-71903487 None:intergenic 30.0%
!! GTGGTTTTTAAGAGAGATTT+TGG - chr5_1:71903471-71903490 None:intergenic 30.0%
GATTGAGATCATAGATTCAT+AGG - chr5_1:71903517-71903536 None:intergenic 30.0%
!! TCAAATTGGTTTGCAATTCA+GGG - chr5_1:71903769-71903788 None:intergenic 30.0%
!! ATCAAATTGGTTTGCAATTC+AGG - chr5_1:71903770-71903789 None:intergenic 30.0%
AATCTTGAACCAATTGTCAA+CGG - chr5_1:71904542-71904561 None:intergenic 30.0%
TAATACAAGTAGTGGTTGTG+AGG - chr5_1:71897152-71897171 None:intergenic 35.0%
AGTCAAGTCTTTGACATAAC+CGG + chr5_1:71897187-71897206 Msa0747500:CDS 35.0%
TTCACCGATAGAACTTTCAA+GGG - chr5_1:71897272-71897291 None:intergenic 35.0%
ATTCACCGATAGAACTTTCA+AGG - chr5_1:71897273-71897292 None:intergenic 35.0%
TCACAACTACTACATGAAGA+GGG - chr5_1:71897300-71897319 None:intergenic 35.0%
TTCACAACTACTACATGAAG+AGG - chr5_1:71897301-71897320 None:intergenic 35.0%
GTAGTTGTGAAACATAGACA+AGG + chr5_1:71897310-71897329 Msa0747500:intron 35.0%
GACACGAATATCACCTTTAA+TGG - chr5_1:71897362-71897381 None:intergenic 35.0%
GAAGATTGATCCTTCTTCTA+AGG + chr5_1:71897450-71897469 Msa0747500:CDS 35.0%
AATGTTGCTACCTTAGAAGA+AGG - chr5_1:71897463-71897482 None:intergenic 35.0%
GTGACCACTAATGGTATATT+AGG + chr5_1:71897484-71897503 Msa0747500:CDS 35.0%
GTGACCTAATATACCATTAG+TGG - chr5_1:71897491-71897510 None:intergenic 35.0%
TAATGGTATATTAGGTCACC+CGG + chr5_1:71897492-71897511 Msa0747500:CDS 35.0%
TATGAATTGAATTCGAACCC+GGG - chr5_1:71897513-71897532 None:intergenic 35.0%
CTATGAATTGAATTCGAACC+CGG - chr5_1:71897514-71897533 None:intergenic 35.0%
AACCATGTATGCAAAGATGT+TGG + chr5_1:71897604-71897623 Msa0747500:intron 35.0%
ACCATGTATGCAAAGATGTT+GGG + chr5_1:71897605-71897624 Msa0747500:intron 35.0%
! TGCTGAAACTTGATTTTGAG+GGG - chr5_1:71897679-71897698 None:intergenic 35.0%
! CTGCTGAAACTTGATTTTGA+GGG - chr5_1:71897680-71897699 None:intergenic 35.0%
! ACTGCTGAAACTTGATTTTG+AGG - chr5_1:71897681-71897700 None:intergenic 35.0%
! TTGATACATTAGAGGCACAA+TGG - chr5_1:71898252-71898271 None:intergenic 35.0%
TAATTGTGTGTGTATGTGTG+AGG - chr5_1:71898366-71898385 None:intergenic 35.0%
GATGAGATGATTGTTGAGAT+TGG - chr5_1:71898389-71898408 None:intergenic 35.0%
TGCGGTTAATATTCAAGTCA+TGG - chr5_1:71899410-71899429 None:intergenic 35.0%
AATAAGTTGTTACGAGTCGT+GGG - chr5_1:71899485-71899504 None:intergenic 35.0%
TAATAAGTTGTTACGAGTCG+TGG - chr5_1:71899486-71899505 None:intergenic 35.0%
TATTCTTAACCATTGTAGGG+TGG + chr5_1:71899528-71899547 Msa0747500:intron 35.0%
! ATGGACATAGATTAGTTGGT+TGG + chr5_1:71899722-71899741 Msa0747500:intron 35.0%
AAGATCTCCATAAACTGACT+TGG - chr5_1:71900000-71900019 None:intergenic 35.0%
TATACTAAGATGTGTCGTGT+AGG - chr5_1:71900152-71900171 None:intergenic 35.0%
AGAACTGCCTTCAAAATCTA+TGG - chr5_1:71900250-71900269 None:intergenic 35.0%
!! TTTTGAAGGCAGTTCTTGAA+TGG + chr5_1:71900254-71900273 Msa0747500:intron 35.0%
AGTGATTTGAACAATACAGC+TGG - chr5_1:71900318-71900337 None:intergenic 35.0%
GCTGCTACAATTCATATCTA+TGG - chr5_1:71900373-71900392 None:intergenic 35.0%
CATATTGTAAATGGCTTAGC+CGG - chr5_1:71900629-71900648 None:intergenic 35.0%
GCTAAGCCATTTACAATATG+TGG + chr5_1:71900629-71900648 Msa0747500:CDS 35.0%
! GTTAGTTGTTTCAATAGTGG+AGG + chr5_1:71900656-71900675 Msa0747500:intron 35.0%
TCACAACTACTACATCAAGA+GGG - chr5_1:71900712-71900731 None:intergenic 35.0%
TTCACAACTACTACATCAAG+AGG - chr5_1:71900713-71900732 None:intergenic 35.0%
ATAATCAAGGTTTACCGTTG+AGG + chr5_1:71900735-71900754 Msa0747500:intron 35.0%
!! AACGCCTTTCTTGTTGTTAA+CGG - chr5_1:71900768-71900787 None:intergenic 35.0%
GAACTTTATGTTGAGATCAG+TGG - chr5_1:71900801-71900820 None:intergenic 35.0%
TGTGACTACTAATGGTGTAT+TGG + chr5_1:71900901-71900920 Msa0747500:CDS 35.0%
GTGACTACTAATGGTGTATT+GGG + chr5_1:71900902-71900921 Msa0747500:CDS 35.0%
! TTGTGGATTGTATTTGAACC+CGG - chr5_1:71900932-71900951 None:intergenic 35.0%
! TCTCAATTTGGAACCAATTG+TGG - chr5_1:71900949-71900968 None:intergenic 35.0%
ACTCCAAAGCAAATTCATTC+AGG + chr5_1:71901331-71901350 Msa0747500:intron 35.0%
! TTGTTTGTTAGAACCTCGAT+CGG + chr5_1:71901569-71901588 Msa0747500:intron 35.0%
TTATAATATGTAGCCGATCG+AGG - chr5_1:71901585-71901604 None:intergenic 35.0%
!! GCGGTTTTTAAGCATGATAT+TGG - chr5_1:71901637-71901656 None:intergenic 35.0%
TGCTTAAAAACCGCCTAATT+TGG + chr5_1:71901643-71901662 Msa0747500:intron 35.0%
GCTTAAAAACCGCCTAATTT+GGG + chr5_1:71901644-71901663 Msa0747500:intron 35.0%
! AATTAGTCTCCCAAATTAGG+CGG - chr5_1:71901656-71901675 None:intergenic 35.0%
CTAATTTCACCAACTACTAG+TGG + chr5_1:71901670-71901689 Msa0747500:intron 35.0%
! AGCCAGAGTACAATTTTGTA+CGG + chr5_1:71901706-71901725 Msa0747500:intron 35.0%
!!! ATGAGTGTCGTTTTAGGTAT+TGG + chr5_1:71901921-71901940 Msa0747500:intron 35.0%
TTGGCACACAGATTAAGAAA+TGG + chr5_1:71901940-71901959 Msa0747500:intron 35.0%
AGACAAACATAAAGTTGCGT+TGG + chr5_1:71902022-71902041 Msa0747500:intron 35.0%
! ACGAACGTGAAGTATTACAA+TGG - chr5_1:71902219-71902238 None:intergenic 35.0%
AAGATATGCATGGTTGTGAT+AGG - chr5_1:71902265-71902284 None:intergenic 35.0%
AATTGAGTGTTTATGCCGTT+CGG - chr5_1:71902652-71902671 None:intergenic 35.0%
ATGTTACGTACAGTTTGTAC+TGG - chr5_1:71902856-71902875 None:intergenic 35.0%
! CTTGGAGAAATTTTCGTGTT+TGG + chr5_1:71903170-71903189 Msa0747500:intron 35.0%
GTGTTTGGAGAAGTTGAAAA+TGG + chr5_1:71903185-71903204 Msa0747500:intron 35.0%
TTTGGAGAAGTTGAAAATGG+AGG + chr5_1:71903188-71903207 Msa0747500:intron 35.0%
TTGTACTTAGAACAAGCTCA+AGG + chr5_1:71903583-71903602 Msa0747500:intron 35.0%
TGACATATCTAACTAGACGT+GGG + chr5_1:71903853-71903872 Msa0747500:intron 35.0%
! TTGTATTGATGGGAGTTTGT+AGG - chr5_1:71904022-71904041 None:intergenic 35.0%
!! ACCCTAAGAAAGGTGTTATT+AGG + chr5_1:71904374-71904393 Msa0747500:CDS 35.0%
CCCTAATAACACCTTTCTTA+GGG - chr5_1:71904378-71904397 None:intergenic 35.0%
!! CCCTAAGAAAGGTGTTATTA+GGG + chr5_1:71904375-71904394 Msa0747500:CDS 35.0%
ACCCTAATAACACCTTTCTT+AGG - chr5_1:71904379-71904398 None:intergenic 35.0%
TGTCTTGATGTTAAGATCAG+TGG - chr5_1:71904404-71904423 None:intergenic 35.0%
CTCTTCACATGCTGTATTAA+GGG - chr5_1:71904428-71904447 None:intergenic 35.0%
ACTCTTCACATGCTGTATTA+AGG - chr5_1:71904429-71904448 None:intergenic 35.0%
!!! GATGATTTTGATTCCTCATC+TGG + chr5_1:71904466-71904485 Msa0747500:CDS 35.0%
GTCAAGTCTTTGACATAACC+GGG + chr5_1:71897188-71897207 Msa0747500:CDS 40.0%
TTCCGATTACTACATCATCC+CGG + chr5_1:71897228-71897247 Msa0747500:CDS 40.0%
CAAACCTTAGTGGAAAACCA+AGG - chr5_1:71897336-71897355 None:intergenic 40.0%
! TTAATGGGTGCAAACCTTAG+TGG - chr5_1:71897346-71897365 None:intergenic 40.0%
CTAAGGTTTGCACCCATTAA+AGG + chr5_1:71897346-71897365 Msa0747500:intron 40.0%
TGCTAGGTAATGCTGATGAT+AGG + chr5_1:71897401-71897420 Msa0747500:CDS 40.0%
GCAACATTTGTGACCACTAA+TGG + chr5_1:71897475-71897494 Msa0747500:CDS 40.0%
AATGGTATATTAGGTCACCC+GGG + chr5_1:71897493-71897512 Msa0747500:CDS 40.0%
TTGCATACATGGTTGCAAGA+AGG - chr5_1:71897598-71897617 None:intergenic 40.0%
TCCCAACATCTTTGCATACA+TGG - chr5_1:71897609-71897628 None:intergenic 40.0%
TCAAGTTTCAGCAGTCTTGA+TGG + chr5_1:71897686-71897705 Msa0747500:intron 40.0%
ATATCGCGTACCAGTAATTG+TGG + chr5_1:71897854-71897873 Msa0747500:intron 40.0%
!!! AGAGAAAGTGCTTTTGAGAG+AGG + chr5_1:71898070-71898089 Msa0747500:intron 40.0%
GTCCCCCTAAAACATTCTTT+AGG - chr5_1:71899021-71899040 None:intergenic 40.0%
GGGGGACTAAAATCAAATGT+TGG + chr5_1:71899034-71899053 Msa0747500:intron 40.0%
!! AAGTTGTTGGTAGCAACCTT+TGG + chr5_1:71899131-71899150 Msa0747500:intron 40.0%
CTCCTATCAGATTTCGCTAT+CGG - chr5_1:71899173-71899192 None:intergenic 40.0%
CCAACTAATCTATGTCCATG+AGG - chr5_1:71899721-71899740 None:intergenic 40.0%
CCTCATGGACATAGATTAGT+TGG + chr5_1:71899718-71899737 Msa0747500:intron 40.0%
! ACATAGATTAGTTGGTTGGC+AGG + chr5_1:71899726-71899745 Msa0747500:intron 40.0%
! CATAGATTAGTTGGTTGGCA+GGG + chr5_1:71899727-71899746 Msa0747500:intron 40.0%
! ATAGATTAGTTGGTTGGCAG+GGG + chr5_1:71899728-71899747 Msa0747500:intron 40.0%
GATGTGTCAATGACTTGATC+GGG - chr5_1:71900566-71900585 None:intergenic 40.0%
CGATGTGTCAATGACTTGAT+CGG - chr5_1:71900567-71900586 None:intergenic 40.0%
CGATCAAGTCATTGACACAT+CGG + chr5_1:71900565-71900584 Msa0747500:CDS 40.0%
GATCAAGTCATTGACACATC+GGG + chr5_1:71900566-71900585 Msa0747500:CDS 40.0%
AGCCGGAATGATGTAGTAAT+TGG - chr5_1:71900612-71900631 None:intergenic 40.0%
ACACCCGTTAACAACAAGAA+AGG + chr5_1:71900761-71900780 Msa0747500:CDS 40.0%
!! ACGCCTTTCTTGTTGTTAAC+GGG - chr5_1:71900767-71900786 None:intergenic 40.0%
TTCCACACTAAGGAATGGTT+AGG - chr5_1:71900851-71900870 None:intergenic 40.0%
CAATCTTCCACACTAAGGAA+TGG - chr5_1:71900856-71900875 None:intergenic 40.0%
AGGATCAATCTTCCACACTA+AGG - chr5_1:71897443-71897462 None:intergenic 40.0%
TAATGGTGTATTGGGAAACC+CGG + chr5_1:71900910-71900929 Msa0747500:CDS 40.0%
! TGTGGATTGTATTTGAACCC+GGG - chr5_1:71900931-71900950 None:intergenic 40.0%
TGCATACATGGTTGCAAGTA+GGG - chr5_1:71901015-71901034 None:intergenic 40.0%
TTGCATACATGGTTGCAAGT+AGG - chr5_1:71901016-71901035 None:intergenic 40.0%
TAAGACTAGGGAAATGCGTT+TGG + chr5_1:71901057-71901076 Msa0747500:intron 40.0%
! GTGCCTGAATGAATTTGCTT+TGG - chr5_1:71901337-71901356 None:intergenic 40.0%
ATTTCACCAACTACTAGTGG+TGG + chr5_1:71901673-71901692 Msa0747500:intron 40.0%
! GCCAGAGTACAATTTTGTAC+GGG + chr5_1:71901707-71901726 Msa0747500:intron 40.0%
! CCAGAGTACAATTTTGTACG+GGG + chr5_1:71901708-71901727 Msa0747500:intron 40.0%
!!! CACTTCTCTTTTTTGGGCTT+CGG + chr5_1:71901791-71901810 Msa0747500:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr5_1:71902140-71902159 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr5_1:71902140-71902159 Msa0747500:intron 40.0%
CACAACCATGCATATCTTCT+TGG + chr5_1:71902267-71902286 Msa0747500:intron 40.0%
GAGTTCCAAGAAGATATGCA+TGG - chr5_1:71902275-71902294 None:intergenic 40.0%
ATAATGCGCGAGAAACTCAT+AGG - chr5_1:71902610-71902629 None:intergenic 40.0%
GGGTAAAGAGCAGAATTCAT+GGG - chr5_1:71902772-71902791 None:intergenic 40.0%
TGGGTAAAGAGCAGAATTCA+TGG - chr5_1:71902773-71902792 None:intergenic 40.0%
ACACTACAGATCCTAGTCAT+GGG - chr5_1:71902985-71903004 None:intergenic 40.0%
TAGATGCACACTCTTTCATG+TGG - chr5_1:71903417-71903436 None:intergenic 40.0%
!! TAAGAGAGATTTTGGTGGGT+GGG - chr5_1:71903463-71903482 None:intergenic 40.0%
!! TTAAGAGAGATTTTGGTGGG+TGG - chr5_1:71903464-71903483 None:intergenic 40.0%
! ATATGGTGAGCTGTCTTTTG+AGG - chr5_1:71903493-71903512 None:intergenic 40.0%
TATTGCATTCAGGTCTTGCT+TGG - chr5_1:71903720-71903739 None:intergenic 40.0%
AGCTTCTGCTTATTGCATTC+AGG - chr5_1:71903730-71903749 None:intergenic 40.0%
AGCAGAAGCTGCTTCAAATT+TGG + chr5_1:71903740-71903759 Msa0747500:intron 40.0%
CTGACATATCTAACTAGACG+TGG + chr5_1:71903852-71903871 Msa0747500:intron 40.0%
GACATATCTAACTAGACGTG+GGG + chr5_1:71903854-71903873 Msa0747500:intron 40.0%
! TGGGAGTTTGTAGGTGTTAT+AGG - chr5_1:71904013-71904032 None:intergenic 40.0%
ACACAGAAGGCAAAAAGGTT+CGG + chr5_1:71904176-71904195 Msa0747500:CDS 40.0%
ATGTCCACTCAATGTTGTAG+TGG + chr5_1:71904309-71904328 Msa0747500:CDS 40.0%
TCAACCACTACAACATTGAG+TGG - chr5_1:71904316-71904335 None:intergenic 40.0%
ACTCAATGTTGTAGTGGTTG+AGG + chr5_1:71904315-71904334 Msa0747500:CDS 40.0%
CTCAATGTTGTAGTGGTTGA+GGG + chr5_1:71904316-71904335 Msa0747500:CDS 40.0%
ACCTTTCTTAGGGTTAACAG+GGG - chr5_1:71904368-71904387 None:intergenic 40.0%
CACCTTTCTTAGGGTTAACA+GGG - chr5_1:71904369-71904388 None:intergenic 40.0%
ACACCTTTCTTAGGGTTAAC+AGG - chr5_1:71904370-71904389 None:intergenic 40.0%
TTGATTCCTCATCTGGACAA+TGG + chr5_1:71904473-71904492 Msa0747500:CDS 40.0%
! TAAGCTTGTGTTTTGCCCTA+CGG + chr5_1:71904582-71904601 Msa0747500:CDS 40.0%
TGCAGAAATCACATACCGTA+GGG - chr5_1:71904600-71904619 None:intergenic 40.0%
TTGCAGAAATCACATACCGT+AGG - chr5_1:71904601-71904620 None:intergenic 40.0%
TACGGTATGTGATTTCTGCA+AGG + chr5_1:71904600-71904619 Msa0747500:CDS 40.0%
! GGGTCTTTAGGGATAGTAAT+GGG + chr5_1:71904641-71904660 Msa0747500:CDS 40.0%
CTGATGTGCCATACAAAGTT+AGG + chr5_1:71904683-71904702 Msa0747500:CDS 40.0%
GGTTGGAACCTAACTTTGTA+TGG - chr5_1:71904694-71904713 None:intergenic 40.0%
ATCAGTTCGAAGCTTCTTCC+CGG - chr5_1:71897209-71897228 None:intergenic 45.0%
AAATATCTCCACCATTCGCC+GGG - chr5_1:71897249-71897268 None:intergenic 45.0%
GAAATATCTCCACCATTCGC+CGG - chr5_1:71897250-71897269 None:intergenic 45.0%
GTGAAACATAGACAAGGCCT+TGG + chr5_1:71897316-71897335 Msa0747500:intron 45.0%
!! AAGGCCTTGGTTTTCCACTA+AGG + chr5_1:71897329-71897348 Msa0747500:intron 45.0%
TGCAAGAAGGACACACATGA+GGG - chr5_1:71897585-71897604 None:intergenic 45.0%
TTGCAAGAAGGACACACATG+AGG - chr5_1:71897586-71897605 None:intergenic 45.0%
CTACTCGAGTCACATTCCAA+AGG - chr5_1:71899150-71899169 None:intergenic 45.0%
AGCCGATAGCGAAATCTGAT+AGG + chr5_1:71899168-71899187 Msa0747500:intron 45.0%
AATGAGTTGTGGGGTTCATG+CGG - chr5_1:71899428-71899447 None:intergenic 45.0%
! TAGATTAGTTGGTTGGCAGG+GGG + chr5_1:71899729-71899748 Msa0747500:intron 45.0%
TTGTCTTCGCAACCACTACT+TGG + chr5_1:71900524-71900543 Msa0747500:CDS 45.0%
GCTTCAGTTGATCCAAGTAG+TGG - chr5_1:71900539-71900558 None:intergenic 45.0%
! TTAACGGGTGTGAACCTCAA+CGG - chr5_1:71900752-71900771 None:intergenic 45.0%
GTCCTAACCATTCCTTAGTG+TGG + chr5_1:71900846-71900865 Msa0747500:CDS 45.0%
AATGGTGTATTGGGAAACCC+GGG + chr5_1:71900911-71900930 Msa0747500:CDS 45.0%
TTGCAAGTAGGGCACACATT+AGG - chr5_1:71901004-71901023 None:intergenic 45.0%
CAAACAAGCGTTTGTCCGTT+AGG - chr5_1:71901305-71901324 None:intergenic 45.0%
! CTAACGGACAAACGCTTGTT+TGG + chr5_1:71901303-71901322 Msa0747500:intron 45.0%
CACAATGTACTCTCGTACGA+AGG - chr5_1:71901548-71901567 None:intergenic 45.0%
TTGAGTCCACCACTAGTAGT+TGG - chr5_1:71901682-71901701 None:intergenic 45.0%
CCCCGTACAAAATTGTACTC+TGG - chr5_1:71901711-71901730 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr5_1:71902139-71902158 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr5_1:71902139-71902158 Msa0747500:intron 45.0%
GGGACTGAGCAAAACTGTTT+GGG - chr5_1:71902792-71902811 None:intergenic 45.0%
TGGGACTGAGCAAAACTGTT+TGG - chr5_1:71902793-71902812 None:intergenic 45.0%
! GCGCATGTTAAGTTGCATAG+GGG - chr5_1:71902834-71902853 None:intergenic 45.0%
! GGCGCATGTTAAGTTGCATA+GGG - chr5_1:71902835-71902854 None:intergenic 45.0%
! TGGCGCATGTTAAGTTGCAT+AGG - chr5_1:71902836-71902855 None:intergenic 45.0%
AGTCACGCTAGTGTAAACAC+TGG + chr5_1:71902947-71902966 Msa0747500:intron 45.0%
CACTACAGATCCTAGTCATG+GGG - chr5_1:71902984-71903003 None:intergenic 45.0%
CACACTACAGATCCTAGTCA+TGG - chr5_1:71902986-71903005 None:intergenic 45.0%
AAGCGTGAGTTAACTCACGA+TGG + chr5_1:71903063-71903082 Msa0747500:intron 45.0%
! GTGTCACTGTCATTCTGTTC+TGG - chr5_1:71903124-71903143 None:intergenic 45.0%
GTAACGTTGCGCAACTAACT+TGG + chr5_1:71903152-71903171 Msa0747500:intron 45.0%
!! AAGAGAGATTTTGGTGGGTG+GGG - chr5_1:71903462-71903481 None:intergenic 45.0%
TCTAACTAGACGTGGGGAAT+TGG + chr5_1:71903860-71903879 Msa0747500:intron 45.0%
GGTTGACACAGAAGGCAAAA+AGG + chr5_1:71904171-71904190 Msa0747500:CDS 45.0%
CACAGAAGGCAAAAAGGTTC+GGG + chr5_1:71904177-71904196 Msa0747500:CDS 45.0%
TCGGATGTAGTAGTCTACTC+CGG - chr5_1:71904203-71904222 None:intergenic 45.0%
AAACCACTACCGACAACACA+AGG - chr5_1:71904259-71904278 None:intergenic 45.0%
TTGAGTGGACATGTCTCGTT+TGG - chr5_1:71904301-71904320 None:intergenic 45.0%
ACCCCTGTTAACCCTAAGAA+AGG + chr5_1:71904364-71904383 Msa0747500:CDS 45.0%
CATGTGAAGAGTCCACGATA+TGG + chr5_1:71904437-71904456 Msa0747500:CDS 45.0%
ATCATCAAGCGTCCATATCG+TGG - chr5_1:71904452-71904471 None:intergenic 45.0%
GACAAACCATTGTCCAGATG+AGG - chr5_1:71904482-71904501 None:intergenic 45.0%
! GGACAATGGTTTGTCACTAC+CGG + chr5_1:71904487-71904506 Msa0747500:CDS 45.0%
! AATGGTTTGTCACTACCGGT+GGG + chr5_1:71904491-71904510 Msa0747500:CDS 45.0%
ATTTCTGCAAGGTCATGTGC+AGG + chr5_1:71904611-71904630 Msa0747500:CDS 45.0%
AAGGTCATGTGCAGGAATGT+TGG + chr5_1:71904619-71904638 Msa0747500:CDS 45.0%
AGGTCATGTGCAGGAATGTT+GGG + chr5_1:71904620-71904639 Msa0747500:CDS 45.0%
CAGGAATGTTGGGGTCTTTA+GGG + chr5_1:71904630-71904649 Msa0747500:CDS 45.0%
! GGGGTCTTTAGGGATAGTAA+TGG + chr5_1:71904640-71904659 Msa0747500:CDS 45.0%
!! TTTAATATATGATTAATTAT+TGG + chr5_1:71898550-71898569 Msa0747500:intron 5.0%
!! TTAATATATGATTAATTATT+GGG + chr5_1:71898551-71898570 Msa0747500:intron 5.0%
!!! AAAAAATTATAATTATTTTG+GGG + chr5_1:71898865-71898884 Msa0747500:intron 5.0%
!! ATTCAAAATAAAATAATTAA+GGG - chr5_1:71899090-71899109 None:intergenic 5.0%
GTGAGGACAATGCAAGGAGA+AGG - chr5_1:71897135-71897154 None:intergenic 50.0%
GTGGTTGTGAGGACAATGCA+AGG - chr5_1:71897141-71897160 None:intergenic 50.0%
CGCCGGGATGATGTAGTAAT+CGG - chr5_1:71897233-71897252 None:intergenic 50.0%
TACTACATCATCCCGGCGAA+TGG + chr5_1:71897235-71897254 Msa0747500:CDS 50.0%
GGCATTGCTCTTGAAACCGT+CGG + chr5_1:71900677-71900696 Msa0747500:intron 50.0%
AAGAGGGCAAGATTCTCCGA+CGG - chr5_1:71900696-71900715 None:intergenic 50.0%
AGAACGCGCGAGAAACTCAT+AGG + chr5_1:71902719-71902738 Msa0747500:intron 50.0%
GAACGCGCGAGAAACTCATA+GGG + chr5_1:71902720-71902739 Msa0747500:intron 50.0%
AGCGTGAGCTAACATGCGTA+AGG + chr5_1:71903303-71903322 Msa0747500:intron 50.0%
GCGTGAGCTAACATGCGTAA+GGG + chr5_1:71903304-71903323 Msa0747500:intron 50.0%
!! AGAGAGATTTTGGTGGGTGG+GGG - chr5_1:71903461-71903480 None:intergenic 50.0%
!! TGGTGAGCTGTCTTTTGAGG+TGG - chr5_1:71903490-71903509 None:intergenic 50.0%
TCTTGCTTGGAGGGTGAATG+AGG - chr5_1:71903707-71903726 None:intergenic 50.0%
GCATTCAGGTCTTGCTTGGA+GGG - chr5_1:71903716-71903735 None:intergenic 50.0%
TGCATTCAGGTCTTGCTTGG+AGG - chr5_1:71903717-71903736 None:intergenic 50.0%
TCTGTGTCAACCACTTGCTC+AGG - chr5_1:71904163-71904182 None:intergenic 50.0%
GAGCAAGTGGTTGACACAGA+AGG + chr5_1:71904163-71904182 Msa0747500:CDS 50.0%
! GTAGTGGTTGAGGGTTTTCG+TGG + chr5_1:71904325-71904344 Msa0747500:CDS 50.0%
! GTTGAGGGTTTTCGTGGTCA+AGG + chr5_1:71904331-71904350 Msa0747500:CDS 50.0%
! CAATGGTTTGTCACTACCGG+TGG + chr5_1:71904490-71904509 Msa0747500:CDS 50.0%
! ATGGTTTGTCACTACCGGTG+GGG + chr5_1:71904492-71904511 Msa0747500:CDS 50.0%
ATTGTCAACGGTGTCCTTGC+CGG - chr5_1:71904530-71904549 None:intergenic 50.0%
GCAAGGACACCGTTGACAAT+TGG + chr5_1:71904530-71904549 Msa0747500:CDS 50.0%
GGTCATGTGCAGGAATGTTG+GGG + chr5_1:71904621-71904640 Msa0747500:CDS 50.0%
GCAGGAATGTTGGGGTCTTT+AGG + chr5_1:71904629-71904648 Msa0747500:CDS 50.0%
! TAGTAATGGGAACCAGCGTG+TGG + chr5_1:71904654-71904673 Msa0747500:CDS 50.0%
TACATCATCCCGGCGAATGG+TGG + chr5_1:71897238-71897257 Msa0747500:intron 55.0%
TTAGTTGGTTGGCAGGGGGT+TGG + chr5_1:71899733-71899752 Msa0747500:intron 55.0%
TCAGAGCATGCCCCATGACT+AGG + chr5_1:71902971-71902990 Msa0747500:intron 55.0%
! GTGTCACTGCCAGTCTGTTC+TGG - chr5_1:71903102-71903121 None:intergenic 55.0%
TTGTCCACCCAACCCTTGCT+CGG + chr5_1:71904121-71904140 Msa0747500:CDS 55.0%
AGCTTCTCCGAGCAAGGGTT+GGG - chr5_1:71904131-71904150 None:intergenic 55.0%
TGACGCTTCACCTGAGCAAG+TGG + chr5_1:71904150-71904169 Msa0747500:CDS 55.0%
GAAGGCAAAAAGGTTCGGGC+CGG + chr5_1:71904181-71904200 Msa0747500:CDS 55.0%
GGGATTTCCAAGAACCCCAC+CGG - chr5_1:71904509-71904528 None:intergenic 55.0%
GGTGGGGTTCTTGGAAATCC+CGG + chr5_1:71904508-71904527 Msa0747500:CDS 55.0%
GGTTCTTGGAAATCCCGGCA+AGG + chr5_1:71904513-71904532 Msa0747500:CDS 55.0%
TTGTCAACGGTGTCCTTGCC+GGG - chr5_1:71904529-71904548 None:intergenic 55.0%
CTGCTCGCACCAGAACAGAC+TGG + chr5_1:71903090-71903109 Msa0747500:intron 60.0%
GAGCAAGGGTTGGGTGGACA+AGG - chr5_1:71904122-71904141 None:intergenic 60.0%
TTCTCCGAGCAAGGGTTGGG+TGG - chr5_1:71904128-71904147 None:intergenic 60.0%
CAGCTTCTCCGAGCAAGGGT+TGG - chr5_1:71904132-71904151 None:intergenic 60.0%
GCGTCAGCTTCTCCGAGCAA+GGG - chr5_1:71904136-71904155 None:intergenic 60.0%
AGCGTCAGCTTCTCCGAGCA+AGG - chr5_1:71904137-71904156 None:intergenic 60.0%
! ATGGGGTTGTCGGGACTGGT+CGG - chr5_1:71904222-71904241 None:intergenic 60.0%
TCACATGGGGTTGTCGGGAC+TGG - chr5_1:71904226-71904245 None:intergenic 60.0%
GTCCCGACAACCCCATGTGA+CGG + chr5_1:71904226-71904245 Msa0747500:CDS 60.0%
GACCGTCACATGGGGTTGTC+GGG - chr5_1:71904231-71904250 None:intergenic 60.0%
CGACCGTCACATGGGGTTGT+CGG - chr5_1:71904232-71904251 None:intergenic 60.0%
ACAACCCCATGTGACGGTCG+TGG + chr5_1:71904232-71904251 Msa0747500:CDS 60.0%
CAACCCCATGTGACGGTCGT+GGG + chr5_1:71904233-71904252 Msa0747500:CDS 60.0%
AAGGCCCACGACCGTCACAT+GGG - chr5_1:71904240-71904259 None:intergenic 60.0%
! GGTCGTGGGCCTTGTGTTGT+CGG + chr5_1:71904247-71904266 Msa0747500:CDS 60.0%
! GGGCCTTGTGTTGTCGGTAG+TGG + chr5_1:71904253-71904272 Msa0747500:CDS 60.0%
GTCACTACCGGTGGGGTTCT+TGG + chr5_1:71904499-71904518 Msa0747500:CDS 60.0%
CATCAGTGAGAGCCACACGC+TGG - chr5_1:71904669-71904688 None:intergenic 60.0%
GGGGCACGACCACCCTACAA+TGG - chr5_1:71899540-71899559 None:intergenic 65.0%
AGGCCCACGACCGTCACATG+GGG - chr5_1:71904239-71904258 None:intergenic 65.0%
CAAGGCCCACGACCGTCACA+TGG - chr5_1:71904241-71904260 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 71897103 71904723 71897103 ID=Msa0747500;Name=Msa0747500
chr5_1 mRNA 71897103 71904723 71897103 ID=Msa0747500-mRNA-1;Parent=Msa0747500;Name=Msa0747500-mRNA-1;_AED=0.13;_eAED=0.14;_QI=0|0|0|1|0|0|6|0|469
chr5_1 exon 71897103 71897256 71897103 ID=Msa0747500-mRNA-1:exon:21112;Parent=Msa0747500-mRNA-1
chr5_1 exon 71897279 71897306 71897279 ID=Msa0747500-mRNA-1:exon:21113;Parent=Msa0747500-mRNA-1
chr5_1 exon 71897351 71897588 71897351 ID=Msa0747500-mRNA-1:exon:21114;Parent=Msa0747500-mRNA-1
chr5_1 exon 71900491 71900659 71900491 ID=Msa0747500-mRNA-1:exon:21115;Parent=Msa0747500-mRNA-1
chr5_1 exon 71900744 71900932 71900744 ID=Msa0747500-mRNA-1:exon:21116;Parent=Msa0747500-mRNA-1
chr5_1 exon 71904092 71904723 71904092 ID=Msa0747500-mRNA-1:exon:21117;Parent=Msa0747500-mRNA-1
chr5_1 CDS 71897103 71897256 71897103 ID=Msa0747500-mRNA-1:cds;Parent=Msa0747500-mRNA-1
chr5_1 CDS 71897279 71897306 71897279 ID=Msa0747500-mRNA-1:cds;Parent=Msa0747500-mRNA-1
chr5_1 CDS 71897351 71897588 71897351 ID=Msa0747500-mRNA-1:cds;Parent=Msa0747500-mRNA-1
chr5_1 CDS 71900491 71900659 71900491 ID=Msa0747500-mRNA-1:cds;Parent=Msa0747500-mRNA-1
chr5_1 CDS 71900744 71900932 71900744 ID=Msa0747500-mRNA-1:cds;Parent=Msa0747500-mRNA-1
chr5_1 CDS 71904092 71904723 71904092 ID=Msa0747500-mRNA-1:cds;Parent=Msa0747500-mRNA-1
Gene Sequence

>Msa0747500

ATGAAGAGCACAACATTGCTAGCACTTTTCCTTCTCCTTGCATTGTCCTCACAACCACTACTTGTATTATCTAAAGCTTCACTCAGTCAAGTCTTTGACATAACCGGGAAGAAGCTTCGAACTGATTCCGATTACTACATCATCCCGGCGAATGTTCTATCGGTGAATCTTGCCCTCTTCATGTTTGCACCCATTAAAGGTGATATTCGTGTCTCCACTGATCTCAATATTATGCTAGGTAATGCTGATGATAGGTGTCCTTATAACTATTCAGTAGTGTGGAAGATTGATCCTTCTTCTAAGGTAGCAACATTTGTGACCACTAATGGTATATTAGGTCACCCGGGTTCGAATTCAATTCATAGTTGGTTCAAGATTGAGAAGTATGATGATGCTTATAAGTTGGTCTATTGCCCTCATAGTACAATGCTAGCATTTCTTCTTCTCTTTGCATTGTCTTCGCAACCACTACTTGGATCAACTGAAGCTTCACCCGATCAAGTCATTGACACATCGGGCAAGAAGCTTCGAGCTGATACCAATTACTACATCATTCCGGCTAAGCCATTTACAATATGTGGCTTTGTTAGTTTACCGTTGAGGTTCACACCCGTTAACAACAAGAAAGGCGTTATTCGTGTCTCCACTGATCTCAACATAAAGTTCTCTAATGATGCTTATGATTCTAGATGTCCTAACCATTCCTTAGTGTGGAAGATTGATCCTTTTTCTAAAGAAGAAACATTTGTGACTACTAATGGTGTATTGGGAAACCCGGTATACATATTATTTGCACTTCTCTTTGCCTTGTCCACCCAACCCTTGCTCGGAGAAGCTGACGCTTCACCTGAGCAAGTGGTTGACACAGAAGGCAAAAAGGTTCGGGCCGGAGTAGACTACTACATCCGACCAGTCCCGACAACCCCATGTGACGGTCGTGGGCCTTGTGTTGTCGGTAGTGGTTTTGTTCTCGTAGCAAGATCACCAAACGAGACATGTCCACTCAATGTTGTAGTGGTTGAGGGTTTTCGTGGTCAAGGAGTAACGTTTACCCCTGTTAACCCTAAGAAAGGTGTTATTAGGGTTTCCACTGATCTTAACATCAAGACATCCCTTAATACAGCATGTGAAGAGTCCACGATATGGACGCTTGATGATTTTGATTCCTCATCTGGACAATGGTTTGTCACTACCGGTGGGGTTCTTGGAAATCCCGGCAAGGACACCGTTGACAATTGGTTCAAGATTGAAAAGTATGAAGATGACTATAAGCTTGTGTTTTGCCCTACGGTATGTGATTTCTGCAAGGTCATGTGCAGGAATGTTGGGGTCTTTAGGGATAGTAATGGGAACCAGCGTGTGGCTCTCACTGATGTGCCATACAAAGTTAGGTTCCAACCATCTGCTTGA

Protein sequence

>Msa0747500

MKSTTLLALFLLLALSSQPLLVLSKASLSQVFDITGKKLRTDSDYYIIPANVLSVNLALFMFAPIKGDIRVSTDLNIMLGNADDRCPYNYSVVWKIDPSSKVATFVTTNGILGHPGSNSIHSWFKIEKYDDAYKLVYCPHSTMLAFLLLFALSSQPLLGSTEASPDQVIDTSGKKLRADTNYYIIPAKPFTICGFVSLPLRFTPVNNKKGVIRVSTDLNIKFSNDAYDSRCPNHSLVWKIDPFSKEETFVTTNGVLGNPVYILFALLFALSTQPLLGEADASPEQVVDTEGKKVRAGVDYYIRPVPTTPCDGRGPCVVGSGFVLVARSPNETCPLNVVVVEGFRGQGVTFTPVNPKKGVIRVSTDLNIKTSLNTACEESTIWTLDDFDSSSGQWFVTTGGVLGNPGKDTVDNWFKIEKYEDDYKLVFCPTVCDFCKVMCRNVGVFRDSNGNQRVALTDVPYKVRFQPSA*