Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235020 | XP_003593734.1 | 97.440 | 586 | 11 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235020 | sp|P51850|PDC1_PEA | 94.098 | 593 | 28 | 2 | 1 | 586 | 1 | 593 | 0.0 | 1130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235020 | G7IKA3 | 97.440 | 586 | 11 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1177 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025060 | Msa0235020 | -0.851489 | 8.585772e-61 | -8.615850e-47 |
| Msa0025090 | Msa0235020 | -0.805415 | 1.349819e-49 | -8.615850e-47 |
| Msa0026120 | Msa0235020 | -0.801903 | 7.226972e-49 | -8.615850e-47 |
| Msa0032040 | Msa0235020 | -0.825744 | 3.966473e-54 | -8.615850e-47 |
| Msa0036560 | Msa0235020 | -0.804418 | 2.181340e-49 | -8.615850e-47 |
| Msa0040190 | Msa0235020 | -0.815652 | 8.283385e-52 | -8.615850e-47 |
| Msa0072710 | Msa0235020 | -0.816149 | 6.416915e-52 | -8.615850e-47 |
| Msa0106810 | Msa0235020 | -0.824778 | 6.712227e-54 | -8.615850e-47 |
| Msa0121080 | Msa0235020 | -0.800478 | 1.414522e-48 | -8.615850e-47 |
| Msa0126760 | Msa0235020 | -0.800588 | 1.343461e-48 | -8.615850e-47 |
| Msa0131800 | Msa0235020 | 0.815892 | 7.325416e-52 | -8.615850e-47 |
| Msa0134550 | Msa0235020 | -0.815340 | 9.720805e-52 | -8.615850e-47 |
| Msa0139280 | Msa0235020 | -0.820071 | 8.322646e-53 | -8.615850e-47 |
| Msa0153290 | Msa0235020 | -0.813289 | 2.759569e-51 | -8.615850e-47 |
| Msa0166580 | Msa0235020 | -0.802028 | 6.812312e-49 | -8.615850e-47 |
| Msa0173260 | Msa0235020 | 0.846602 | 1.959360e-59 | -8.615850e-47 |
| Msa0174800 | Msa0235020 | -0.805201 | 1.496525e-49 | -8.615850e-47 |
| Msa0176610 | Msa0235020 | -0.822571 | 2.205491e-53 | -8.615850e-47 |
| Msa0192890 | Msa0235020 | 0.959238 | 3.195553e-117 | -8.615850e-47 |
| Msa0196530 | Msa0235020 | 0.809265 | 2.060636e-50 | -8.615850e-47 |
| Msa0206600 | Msa0235020 | -0.825947 | 3.550110e-54 | -8.615850e-47 |
| Msa0218480 | Msa0235020 | -0.801685 | 8.011881e-49 | -8.615850e-47 |
| Msa0218590 | Msa0235020 | -0.806444 | 8.203780e-50 | -8.615850e-47 |
| Msa0222720 | Msa0235020 | -0.809705 | 1.658203e-50 | -8.615850e-47 |
| Msa0226580 | Msa0235020 | -0.814413 | 1.560418e-51 | -8.615850e-47 |
| Msa0235020 | Msa0238420 | 0.847204 | 1.340782e-59 | -8.615850e-47 |
| Msa0235020 | Msa0251140 | -0.805943 | 1.045901e-49 | -8.615850e-47 |
| Msa0235020 | Msa0261200 | -0.804741 | 1.867890e-49 | -8.615850e-47 |
| Msa0235020 | Msa0264020 | -0.805905 | 1.064989e-49 | -8.615850e-47 |
| Msa0235020 | Msa0266380 | -0.804540 | 2.057365e-49 | -8.615850e-47 |
| Msa0235020 | Msa0273420 | 0.998419 | 1.548570e-264 | -8.615850e-47 |
| Msa0235020 | Msa0313680 | 0.972687 | 3.559871e-135 | -8.615850e-47 |
| Msa0235020 | Msa0319090 | -0.800868 | 1.177518e-48 | -8.615850e-47 |
| Msa0235020 | Msa0341860 | -0.802048 | 6.748447e-49 | -8.615850e-47 |
| Msa0235020 | Msa0372250 | -0.818540 | 1.858442e-52 | -8.615850e-47 |
| Msa0235020 | Msa0375500 | 0.838089 | 3.536699e-57 | -8.615850e-47 |
| Msa0235020 | Msa0384220 | 0.833532 | 5.051679e-56 | -8.615850e-47 |
| Msa0235020 | Msa0423590 | -0.806257 | 8.982353e-50 | -8.615850e-47 |
| Msa0235020 | Msa0424300 | 0.820981 | 5.146599e-53 | -8.615850e-47 |
| Msa0235020 | Msa0434890 | 0.870681 | 1.214673e-66 | -8.615850e-47 |
| Msa0235020 | Msa0437850 | -0.802372 | 5.787650e-49 | -8.615850e-47 |
| Msa0235020 | Msa0440110 | -0.801611 | 8.298064e-49 | -8.615850e-47 |
| Msa0235020 | Msa0471210 | 0.856763 | 2.581523e-62 | -8.615850e-47 |
| Msa0235020 | Msa0475830 | -0.819901 | 9.105552e-53 | -8.615850e-47 |
| Msa0235020 | Msa0498320 | -0.800794 | 1.219282e-48 | -8.615850e-47 |
| Msa0235020 | Msa0512430 | -0.805785 | 1.129038e-49 | -8.615850e-47 |
| Msa0235020 | Msa0515930 | 0.820726 | 5.888988e-53 | -8.615850e-47 |
| Msa0235020 | Msa0521100 | -0.809307 | 2.018781e-50 | -8.615850e-47 |
| Msa0235020 | Msa0532310 | 0.813124 | 2.999554e-51 | -8.615850e-47 |
| Msa0235020 | Msa0568810 | -0.821801 | 3.328465e-53 | -8.615850e-47 |
| Msa0235020 | Msa0576150 | -0.827990 | 1.152706e-54 | -8.615850e-47 |
| Msa0235020 | Msa0587060 | -0.809196 | 2.132309e-50 | -8.615850e-47 |
| Msa0235020 | Msa0599250 | -0.806981 | 6.317837e-50 | -8.615850e-47 |
| Msa0235020 | Msa0601710 | -0.800833 | 1.197063e-48 | -8.615850e-47 |
| Msa0235020 | Msa0605020 | 0.849149 | 3.891564e-60 | -8.615850e-47 |
| Msa0235020 | Msa0607440 | -0.800364 | 1.492116e-48 | -8.615850e-47 |
| Msa0235020 | Msa0624890 | -0.806857 | 6.710326e-50 | -8.615850e-47 |
| Msa0235020 | Msa0639880 | -0.816963 | 4.216367e-52 | -8.615850e-47 |
| Msa0235020 | Msa0646670 | 0.850871 | 1.282829e-60 | -8.615850e-47 |
| Msa0235020 | Msa0657820 | -0.804876 | 1.749764e-49 | -8.615850e-47 |
| Msa0235020 | Msa0665010 | -0.801274 | 9.727548e-49 | -8.615850e-47 |
| Msa0235020 | Msa0667240 | 0.826743 | 2.294623e-54 | -8.615850e-47 |
| Msa0235020 | Msa0681040 | -0.809865 | 1.531923e-50 | -8.615850e-47 |
| Msa0235020 | Msa0709820 | 0.885510 | 7.644369e-72 | -8.615850e-47 |
| Msa0235020 | Msa0712440 | -0.814016 | 1.909634e-51 | -8.615850e-47 |
| Msa0235020 | Msa0747500 | 0.858275 | 9.215297e-63 | -8.615850e-47 |
| Msa0235020 | Msa0749900 | -0.808452 | 3.076277e-50 | -8.615850e-47 |
| Msa0235020 | Msa0753530 | -0.804505 | 2.092219e-49 | -8.615850e-47 |
| Msa0235020 | Msa0770890 | -0.809010 | 2.337246e-50 | -8.615850e-47 |
| Msa0235020 | Msa0807170 | -0.803991 | 2.676688e-49 | -8.615850e-47 |
| Msa0235020 | Msa0830120 | -0.803717 | 3.050512e-49 | -8.615850e-47 |
| Msa0235020 | Msa0830450 | -0.805010 | 1.641125e-49 | -8.615850e-47 |
| Msa0235020 | Msa0840630 | -0.800047 | 1.731144e-48 | -8.615850e-47 |
| Msa0235020 | Msa0854860 | 0.812323 | 4.490915e-51 | -8.615850e-47 |
| Msa0235020 | Msa0882340 | -0.809687 | 1.673087e-50 | -8.615850e-47 |
| Msa0235020 | Msa0896990 | 0.849671 | 2.783882e-60 | -8.615850e-47 |
| Msa0235020 | Msa0962260 | 0.814037 | 1.888703e-51 | -8.615850e-47 |
| Msa0235020 | Msa0996940 | 0.817633 | 2.980368e-52 | -8.615850e-47 |
| Msa0235020 | Msa1034870 | 0.812797 | 3.538574e-51 | -8.615850e-47 |
| Msa0235020 | Msa1039650 | 0.805912 | 1.061386e-49 | -8.615850e-47 |
| Msa0235020 | Msa1064420 | -0.813358 | 2.664971e-51 | -8.615850e-47 |
| Msa0235020 | Msa1067040 | 0.807830 | 4.173891e-50 | -8.615850e-47 |
| Msa0235020 | Msa1081650 | -0.803657 | 3.139450e-49 | -8.615850e-47 |
| Msa0235020 | Msa1117280 | -0.809316 | 2.009284e-50 | -8.615850e-47 |
| Msa0235020 | Msa1151970 | -0.811733 | 6.039074e-51 | -8.615850e-47 |
| Msa0235020 | Msa1161520 | -0.803428 | 3.502161e-49 | -8.615850e-47 |
| Msa0235020 | Msa1182400 | -0.804497 | 2.099824e-49 | -8.615850e-47 |
| Msa0235020 | Msa1192790 | -0.802359 | 5.824618e-49 | -8.615850e-47 |
| Msa0235020 | Msa1198820 | -0.811984 | 5.325971e-51 | -8.615850e-47 |
| Msa0235020 | Msa1203090 | -0.829211 | 5.842898e-55 | -8.615850e-47 |
| Msa0235020 | Msa1208250 | -0.822049 | 2.915792e-53 | -8.615850e-47 |
| Msa0235020 | Msa1221570 | 0.810522 | 1.105356e-50 | -8.615850e-47 |
| Msa0235020 | Msa1223600 | -0.811307 | 7.474148e-51 | -8.615850e-47 |
| Msa0235020 | Msa1230190 | -0.810831 | 9.479558e-51 | -8.615850e-47 |
| Msa0235020 | Msa1258600 | 0.850089 | 2.126712e-60 | -8.615850e-47 |
| Msa0235020 | Msa1298440 | 0.835315 | 1.802822e-56 | -8.615850e-47 |
| Msa0235020 | Msa1304980 | 0.824148 | 9.441591e-54 | -8.615850e-47 |
| Msa0235020 | Msa1319440 | -0.853807 | 1.871463e-61 | -8.615850e-47 |
| Msa0235020 | Msa1327400 | -0.805482 | 1.306729e-49 | -8.615850e-47 |
| Msa0235020 | Msa1327420 | -0.804156 | 2.472981e-49 | -8.615850e-47 |
| Msa0235020 | Msa1328600 | -0.800036 | 1.739865e-48 | -8.615850e-47 |
| Msa0235020 | Msa1357380 | -0.823039 | 1.716460e-53 | -8.615850e-47 |
| Msa0235020 | Msa1366700 | -0.809811 | 1.573200e-50 | -8.615850e-47 |
| Msa0235020 | Msa1368800 | -0.801743 | 7.796824e-49 | -8.615850e-47 |
| Msa0235020 | Msa1392990 | -0.811369 | 7.248273e-51 | -8.615850e-47 |
| Msa0235020 | Msa1395700 | -0.844329 | 8.089635e-59 | -8.615850e-47 |
| Msa0235020 | Msa1400600 | -0.813483 | 2.502521e-51 | -8.615850e-47 |
| Msa0235020 | Msa1400940 | 0.854251 | 1.394337e-61 | -8.615850e-47 |
| Msa0235020 | Msa1402000 | 0.806526 | 7.881657e-50 | -8.615850e-47 |
| Msa0235020 | Msa1415120 | -0.800996 | 1.108996e-48 | -8.615850e-47 |
| Msa0235020 | Msa1432250 | -0.813657 | 2.290800e-51 | -8.615850e-47 |
| Msa0235020 | Msa1433380 | -0.809036 | 2.307355e-50 | -8.615850e-47 |
| Msa0235020 | Msa1437650 | -0.810427 | 1.158727e-50 | -8.615850e-47 |
| Msa0235020 | Msa1449510 | -0.812418 | 4.282388e-51 | -8.615850e-47 |
| Msa0235020 | Msa1450420 | -0.807807 | 4.219383e-50 | -8.615850e-47 |
| Msa0235020 | Msa1450710 | 0.802926 | 4.448131e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235020 | MtrunA17_Chr2g0283471 | 97.440 | 586 | 11 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1177 |
| Msa0235020 | MtrunA17_Chr7g0242961 | 82.155 | 566 | 101 | 0 | 21 | 586 | 38 | 603 | 0.0 | 983 |
| Msa0235020 | MtrunA17_Chr4g0007071 | 78.049 | 574 | 126 | 0 | 13 | 586 | 34 | 607 | 0.0 | 950 |
| Msa0235020 | MtrunA17_Chr5g0420011 | 77.875 | 574 | 127 | 0 | 13 | 586 | 34 | 607 | 0.0 | 948 |
| Msa0235020 | MtrunA17_Chr7g0242981 | 75.815 | 583 | 120 | 2 | 4 | 586 | 28 | 589 | 0.0 | 915 |
| Msa0235020 | MtrunA17_Chr2g0279461 | 65.116 | 215 | 47 | 1 | 25 | 211 | 51 | 265 | 5.96e-99 | 301 |
| Msa0235020 | MtrunA17_Chr2g0279471 | 67.241 | 116 | 38 | 0 | 468 | 583 | 17 | 132 | 2.64e-49 | 167 |
| Msa0235020 | MtrunA17_Chr2g0290681 | 23.230 | 551 | 369 | 16 | 30 | 547 | 67 | 596 | 3.58e-17 | 85.1 |
| Msa0235020 | MtrunA17_Chr3g0132201 | 23.178 | 535 | 357 | 15 | 9 | 512 | 57 | 568 | 5.23e-17 | 84.7 |
| Msa0235020 | MtrunA17_Chr2g0281881 | 22.656 | 512 | 340 | 16 | 30 | 512 | 88 | 572 | 8.25e-15 | 77.8 |
| Msa0235020 | MtrunA17_Chr6g0449041 | 22.638 | 508 | 311 | 21 | 31 | 492 | 11 | 482 | 2.40e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235020 | AT5G54960.1 | 81.062 | 565 | 107 | 0 | 22 | 586 | 43 | 607 | 0.0 | 974 |
| Msa0235020 | AT4G33070.1 | 78.819 | 576 | 122 | 0 | 11 | 586 | 32 | 607 | 0.0 | 966 |
| Msa0235020 | AT5G01320.1 | 78.388 | 583 | 121 | 1 | 9 | 586 | 21 | 603 | 0.0 | 962 |
| Msa0235020 | AT5G01330.1 | 78.153 | 563 | 123 | 0 | 24 | 586 | 30 | 592 | 0.0 | 937 |
| Msa0235020 | AT3G48560.1 | 22.563 | 554 | 368 | 17 | 30 | 547 | 103 | 631 | 4.88e-13 | 72.4 |
Find 172 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAATTTGTATATTTAATT+TGG | 0.147828 | 2_2:+7762612 | Msa0235020:three_prime_UTR |
| CTTAACTGCATTGTCTAAAA+AGG | 0.176719 | 2_2:+7761122 | Msa0235020:CDS |
| CCGATTGGGCTGTATAATTA+AGG | 0.241271 | 2_2:-7761049 | None:intergenic |
| CGCGATGTCTTCTCTGTTCC+CGG | 0.267229 | 2_2:+7759282 | Msa0235020:CDS |
| AGCATTTCCCCTCTCCATTA+TGG | 0.274068 | 2_2:-7762226 | None:intergenic |
| GCCTTTGCTACCCTAAGTTT+TGG | 0.287789 | 2_2:-7760790 | None:intergenic |
| CACATTTCATTGGAACATAC+TGG | 0.298376 | 2_2:+7760902 | Msa0235020:CDS |
| CCATTCTAGCAACTCTTTGC+TGG | 0.311297 | 2_2:-7762490 | None:intergenic |
| AGAATTCTTCATCATACTAT+TGG | 0.312759 | 2_2:+7759555 | Msa0235020:CDS |
| TGTTCTATTCAAGCACATTC+AGG | 0.312908 | 2_2:+7761242 | Msa0235020:CDS |
| CCGGAGGGCATTACAGCTAT+TGG | 0.321768 | 2_2:-7760853 | None:intergenic |
| GACGGCGGATGGAGCACAAC+TGG | 0.332857 | 2_2:-7759193 | None:intergenic |
| CATACAATGTGATCAAGAAT+TGG | 0.342392 | 2_2:+7762177 | Msa0235020:CDS |
| TTCTGGTACAAATCCTTTAC+CGG | 0.345650 | 2_2:-7760872 | None:intergenic |
| ATTGGCAATGGTCTTTCCTT+AGG | 0.347746 | 2_2:+7761078 | Msa0235020:CDS |
| CAATGGTCTTTCCTTAGGTT+GGG | 0.348448 | 2_2:+7761083 | Msa0235020:CDS |
| ATATGCATAATGCAGTAATT+AGG | 0.356907 | 2_2:-7762571 | None:intergenic |
| TCCGTTTGCCTGAGAATTGC+GGG | 0.357039 | 2_2:+7761701 | Msa0235020:CDS |
| GCAATGGTCTTTCCTTAGGT+TGG | 0.372204 | 2_2:+7761082 | Msa0235020:CDS |
| GTACCATAGTCATTAGAATT+AGG | 0.372904 | 2_2:-7759528 | None:intergenic |
| CAACCTATGCTTATATAAAC+AGG | 0.377211 | 2_2:-7760206 | None:intergenic |
| AGTATTCTCAACGCCATTGC+CGG | 0.382049 | 2_2:+7759462 | Msa0235020:CDS |
| CAATTCTTGATCACATTGTA+TGG | 0.382941 | 2_2:-7762176 | None:intergenic |
| GAAAATCATCCACATTTCAT+TGG | 0.391339 | 2_2:+7760892 | Msa0235020:CDS |
| CAATTGATCCATACTGCATC+TGG | 0.392111 | 2_2:-7761841 | None:intergenic |
| GAAGCAATTGCAACTGCTAC+TGG | 0.392822 | 2_2:+7762414 | Msa0235020:CDS |
| CCTTAATTATACAGCCCAAT+CGG | 0.396259 | 2_2:+7761049 | Msa0235020:CDS |
| AATAGAACATTAACTCTAAG+AGG | 0.396585 | 2_2:-7761228 | None:intergenic |
| CGATGGGCGGCCACCTTGCA+CGG | 0.405963 | 2_2:+7759238 | Msa0235020:CDS |
| AGCATAGGTTGTAATCTTCC+TGG | 0.407316 | 2_2:+7760218 | Msa0235020:CDS |
| GGACCTAATTCTAATGACTA+TGG | 0.411083 | 2_2:+7759525 | Msa0235020:CDS |
| CAGATGCAGTATGGATCAAT+TGG | 0.413027 | 2_2:+7761842 | Msa0235020:CDS |
| TGAGCTCCGGCTCAGCGATC+AGG | 0.413257 | 2_2:-7759332 | None:intergenic |
| TATGAATTCCAGATGCAGTA+TGG | 0.413567 | 2_2:+7761833 | Msa0235020:CDS |
| TTAATATGGTTAAGTTTGGT+TGG | 0.413924 | 2_2:-7759022 | None:intergenic |
| TATATGCAGGGTAAGCAATC+AGG | 0.434839 | 2_2:+7760693 | Msa0235020:intron |
| TCGTGGGCGGGCCAAAACTT+AGG | 0.435343 | 2_2:+7760779 | Msa0235020:CDS |
| TTTGGCCCGCCCACGATCAC+TGG | 0.439101 | 2_2:-7760772 | None:intergenic |
| TTATAGTGGAGGACATGTAT+AGG | 0.440452 | 2_2:+7762641 | Msa0235020:three_prime_UTR |
| CAGCAAAGAGTTGCTAGAAT+GGG | 0.446474 | 2_2:+7762491 | Msa0235020:CDS |
| AAAGGCACAGAAGGCTTTCA+TGG | 0.450180 | 2_2:+7760807 | Msa0235020:CDS |
| AGCTTACAGTGAAAACTTGC+CGG | 0.452863 | 2_2:+7759485 | Msa0235020:CDS |
| AAAGTTGGATGAGGAATTCC+AGG | 0.455082 | 2_2:-7760236 | None:intergenic |
| TTCAATGACTATAGTTCGGT+TGG | 0.457129 | 2_2:+7760997 | Msa0235020:CDS |
| TGCTGTAACGAGCTGAATGC+TGG | 0.458389 | 2_2:+7759366 | Msa0235020:CDS |
| CGAACTATAGTCATTGAAGA+TGG | 0.460060 | 2_2:-7760992 | None:intergenic |
| TATAACCTCCATTGTTAATG+AGG | 0.464139 | 2_2:-7762127 | None:intergenic |
| CCAGCAAAGAGTTGCTAGAA+TGG | 0.466543 | 2_2:+7762490 | Msa0235020:CDS |
| ATACAATGTGATCAAGAATT+GGG | 0.467312 | 2_2:+7762178 | Msa0235020:CDS |
| ATGACTTACCCGCAATTCTC+AGG | 0.469236 | 2_2:-7761709 | None:intergenic |
| GATGGAGCACAACTGGGAGG+AGG | 0.469465 | 2_2:-7759186 | None:intergenic |
| TTGCCAATGGTGACCCGATT+GGG | 0.471157 | 2_2:-7761063 | None:intergenic |
| AGTTGCTAGAATGGGGATCC+CGG | 0.472564 | 2_2:+7762499 | Msa0235020:CDS |
| CATCTTCAATGACTATAGTT+CGG | 0.473413 | 2_2:+7760993 | Msa0235020:CDS |
| TAATAAGAATTACATACAAC+AGG | 0.473583 | 2_2:-7762786 | None:intergenic |
| GCCGCCCATCGTTCCATCAC+AGG | 0.477265 | 2_2:-7759226 | None:intergenic |
| AAGTGAAGAGGTTTATGAAA+GGG | 0.477752 | 2_2:-7759047 | None:intergenic |
| TTGCCGGTGATTTGTATTGT+TGG | 0.479771 | 2_2:+7759501 | Msa0235020:CDS |
| TAGCTGAAACCGGAGATTCA+TGG | 0.480081 | 2_2:+7761662 | Msa0235020:CDS |
| GCTGTAATGCCCTCCGGTAA+AGG | 0.482481 | 2_2:+7760859 | Msa0235020:CDS |
| CGTGGGCGGGCCAAAACTTA+GGG | 0.484670 | 2_2:+7760780 | Msa0235020:CDS |
| GCACGGCGCCTCGTCGAGAT+CGG | 0.485692 | 2_2:+7759255 | Msa0235020:CDS |
| ATACTCATTGTTGATAAAGA+AGG | 0.491540 | 2_2:+7761020 | Msa0235020:CDS |
| CGCCGGGCATTCCTTTGAAG+CGG | 0.492468 | 2_2:+7761193 | Msa0235020:CDS |
| GCCGGGCATTCCTTTGAAGC+GGG | 0.494061 | 2_2:+7761194 | Msa0235020:CDS |
| ACACAAACTATCAAACTCAA+TGG | 0.495489 | 2_2:+7759146 | Msa0235020:exon |
| TGGTCAGTAGGTGCTACTCT+TGG | 0.498559 | 2_2:+7761866 | Msa0235020:CDS |
| ATAATGGAGAGGGGAAATGC+TGG | 0.498584 | 2_2:+7762228 | Msa0235020:CDS |
| GTCCGTCCCTTCACCTGTGA+TGG | 0.499685 | 2_2:+7759213 | Msa0235020:CDS |
| TACATACAACAGGATATCAT+TGG | 0.501330 | 2_2:-7762776 | None:intergenic |
| GGATCAATTGGTTGGTCAGT+AGG | 0.502445 | 2_2:+7761854 | Msa0235020:CDS |
| TCATCCTTCTCCCGCTTCAA+AGG | 0.503104 | 2_2:-7761204 | None:intergenic |
| ACTGCTGTAATAGCTGAAAC+CGG | 0.503719 | 2_2:+7761652 | Msa0235020:CDS |
| CTGTCAGTACTAGCTACTGT+GGG | 0.503887 | 2_2:+7760929 | Msa0235020:CDS |
| AACACACGCGCCAACTCCCT+TGG | 0.506506 | 2_2:-7759415 | None:intergenic |
| CTTAATTATACAGCCCAATC+GGG | 0.507111 | 2_2:+7761050 | Msa0235020:CDS |
| TCAGGCAGTGGTGAATAACT+TGG | 0.509647 | 2_2:+7760127 | Msa0235020:intron |
| GTGAAGGGACGGACGGCGGA+TGG | 0.511628 | 2_2:-7759204 | None:intergenic |
| TACGCACGTGCCAAGGGAGT+TGG | 0.512127 | 2_2:+7759405 | Msa0235020:CDS |
| GGCTGTTAGCAGCAGCAACC+CGG | 0.512218 | 2_2:-7762518 | None:intergenic |
| AAGAGTTAAATTGAAGTCAC+CGG | 0.515268 | 2_2:-7759301 | None:intergenic |
| ACATTTCATTGGAACATACT+GGG | 0.516280 | 2_2:+7760903 | Msa0235020:CDS |
| TGACCACCTGATCGCTGAGC+CGG | 0.516519 | 2_2:+7759326 | Msa0235020:CDS |
| CCGGTGATTTGTATTGTTGG+AGG | 0.519985 | 2_2:+7759504 | Msa0235020:CDS |
| TCTCGACGAGGCGCCGTGCA+AGG | 0.521803 | 2_2:-7759251 | None:intergenic |
| TGACGGTTACGCACGTGCCA+AGG | 0.521812 | 2_2:+7759398 | Msa0235020:CDS |
| ACAGTTAAACCATGAATCTC+CGG | 0.523001 | 2_2:-7761671 | None:intergenic |
| ATTGCCAATGGTGACCCGAT+TGG | 0.524019 | 2_2:-7761064 | None:intergenic |
| TGAAGCCAGTGATCGTGGGC+GGG | 0.526274 | 2_2:+7760767 | Msa0235020:CDS |
| ACCCGCAATTCTCAGGCAAA+CGG | 0.528878 | 2_2:-7761702 | None:intergenic |
| CATTCCTTTGAAGCGGGAGA+AGG | 0.531683 | 2_2:+7761200 | Msa0235020:CDS |
| ACAGGGTCCCTAGCAAAAGT+TGG | 0.532482 | 2_2:-7760251 | None:intergenic |
| AGCTGTGAAGCCAGTGATCG+TGG | 0.532532 | 2_2:+7760762 | Msa0235020:CDS |
| ATTGAAGTTGAGATTCATGA+TGG | 0.533621 | 2_2:+7762152 | Msa0235020:CDS |
| ATGGAGTTTGCAGAAGCTAG+TGG | 0.535258 | 2_2:+7760826 | Msa0235020:CDS |
| CCGTAGAATCTATGTTCCGC+CGG | 0.536077 | 2_2:+7761176 | Msa0235020:CDS |
| CAGCCCAATCGGGTCACCAT+TGG | 0.536193 | 2_2:+7761060 | Msa0235020:CDS |
| CTCCGTTTGCCTGAGAATTG+CGG | 0.539254 | 2_2:+7761700 | Msa0235020:CDS |
| TCTATTGGGGATTAGGAGGA+CGG | 0.540406 | 2_2:-7762539 | None:intergenic |
| AAGCCTGTTTATATAAGCAT+AGG | 0.541294 | 2_2:+7760203 | Msa0235020:CDS |
| ATGGAGCACAACTGGGAGGA+GGG | 0.542344 | 2_2:-7759185 | None:intergenic |
| TCCCGCTTCAAAGGAATGCC+CGG | 0.545573 | 2_2:-7761195 | None:intergenic |
| TGCTACTCTTGGATATGCAC+AGG | 0.546594 | 2_2:+7761877 | Msa0235020:CDS |
| CATCGTTCCATCACAGGTGA+AGG | 0.549457 | 2_2:-7759220 | None:intergenic |
| GACGGTTACGCACGTGCCAA+GGG | 0.554158 | 2_2:+7759399 | Msa0235020:CDS |
| GCCAAAACTTAGGGTAGCAA+AGG | 0.554357 | 2_2:+7760789 | Msa0235020:CDS |
| TTTGTGAGTGCCATCCATAA+TGG | 0.556042 | 2_2:+7762212 | Msa0235020:CDS |
| GTGAAGCCAGTGATCGTGGG+CGG | 0.556799 | 2_2:+7760766 | Msa0235020:CDS |
| ATGGATGGCACTCACAAAGC+GGG | 0.559447 | 2_2:-7762207 | None:intergenic |
| TTCACCTGTGATGGAACGAT+GGG | 0.561828 | 2_2:+7759222 | Msa0235020:CDS |
| TGCAGTATGGATCAATTGGT+TGG | 0.563971 | 2_2:+7761846 | Msa0235020:CDS |
| GCTGTTAGCAGCAGCAACCC+GGG | 0.564051 | 2_2:-7762517 | None:intergenic |
| ACGGCGGATGGAGCACAACT+GGG | 0.566889 | 2_2:-7759192 | None:intergenic |
| ACCTGTGATGGAACGATGGG+CGG | 0.568178 | 2_2:+7759225 | Msa0235020:CDS |
| TTCACTGTAAGCTCCGGCAA+TGG | 0.568212 | 2_2:-7759475 | None:intergenic |
| CTTCACCTGTGATGGAACGA+TGG | 0.568221 | 2_2:+7759221 | Msa0235020:CDS |
| CCTTATTTAGGTGACGGCAC+AGG | 0.570395 | 2_2:+7762061 | Msa0235020:intron |
| AATCGGGTCACCATTGGCAA+TGG | 0.570764 | 2_2:+7761066 | Msa0235020:CDS |
| TGCAACACTTGAGGACAAGA+TGG | 0.571581 | 2_2:-7762721 | None:intergenic |
| GGGGAAATGCTGGACTGCTA+AGG | 0.572838 | 2_2:+7762238 | Msa0235020:CDS |
| TAGGGTAGCAAAGGCACAGA+AGG | 0.572977 | 2_2:+7760798 | Msa0235020:CDS |
| TTTCCCCTCTCCATTATGGA+TGG | 0.575380 | 2_2:-7762222 | None:intergenic |
| ATCTTCCTCATTAACAATGG+AGG | 0.578555 | 2_2:+7762122 | Msa0235020:CDS |
| CGTAGAATCTATGTTCCGCC+GGG | 0.578586 | 2_2:+7761177 | Msa0235020:CDS |
| GTTGCTAGAATGGGGATCCC+GGG | 0.579978 | 2_2:+7762500 | Msa0235020:CDS |
| GGCAGTGGTGAATAACTTGG+AGG | 0.581002 | 2_2:+7760130 | Msa0235020:intron |
| AGCCATGAAAACCCAACCTA+AGG | 0.581125 | 2_2:-7761094 | None:intergenic |
| CCGGCGGAACATAGATTCTA+CGG | 0.582973 | 2_2:-7761176 | None:intergenic |
| CCAATAGCTGTAATGCCCTC+CGG | 0.583459 | 2_2:+7760853 | Msa0235020:CDS |
| GAAGTGAAGAGGTTTATGAA+AGG | 0.583637 | 2_2:-7759048 | None:intergenic |
| GTGATTGCATGCATTGGTGA+TGG | 0.584370 | 2_2:+7761917 | Msa0235020:CDS |
| TCCCTAGCAAAAGTTGGATG+AGG | 0.588011 | 2_2:-7760245 | None:intergenic |
| ACAACAAAGTGCAACACTTG+AGG | 0.589324 | 2_2:-7762730 | None:intergenic |
| GAACTATAGTCATTGAAGAT+GGG | 0.590504 | 2_2:-7760991 | None:intergenic |
| GAGCCGGAGCTCAACCTCGT+CGG | 0.599794 | 2_2:+7759342 | Msa0235020:CDS |
| CGACGAGGCGCCGTGCAAGG+TGG | 0.601198 | 2_2:-7759248 | None:intergenic |
| CAACCGACGAGGTTGAGCTC+CGG | 0.602678 | 2_2:-7759345 | None:intergenic |
| TTCCATCACAGGTGAAGGGA+CGG | 0.603435 | 2_2:-7759215 | None:intergenic |
| GCTCCGGCTCAGCGATCAGG+TGG | 0.604206 | 2_2:-7759329 | None:intergenic |
| TTTGTGTGTGTGAAGTGAAG+AGG | 0.610841 | 2_2:-7759059 | None:intergenic |
| AGAAGCAGCTGTCGAAGAAG+CGG | 0.612852 | 2_2:+7760723 | Msa0235020:CDS |
| ATTTCAACAATGATCCGTTG+TGG | 0.614449 | 2_2:+7762086 | Msa0235020:CDS |
| ACGGTAATTCTCCACAGCTG+TGG | 0.615891 | 2_2:-7761157 | None:intergenic |
| AGAGTTAAATTGAAGTCACC+GGG | 0.615952 | 2_2:-7759300 | None:intergenic |
| GTTGAACAGGAACTGCTAAG+TGG | 0.616520 | 2_2:+7761625 | Msa0235020:intron |
| TGCAGGGTAAGCAATCAGGA+AGG | 0.617642 | 2_2:+7760697 | Msa0235020:intron |
| ATCATCTTCCTCATTAACAA+TGG | 0.620276 | 2_2:+7762119 | Msa0235020:CDS |
| GCTGTCAGTACTAGCTACTG+TGG | 0.622291 | 2_2:+7760928 | Msa0235020:CDS |
| CCTCCAACAATACAAATCAC+CGG | 0.622440 | 2_2:-7759504 | None:intergenic |
| ATCGTTCCATCACAGGTGAA+GGG | 0.622898 | 2_2:-7759219 | None:intergenic |
| AGTGCCATCCATAATGGAGA+GGG | 0.626807 | 2_2:+7762218 | Msa0235020:CDS |
| TGGTACAAATCCTTTACCGG+AGG | 0.627342 | 2_2:-7760869 | None:intergenic |
| GGTACAAATCCTTTACCGGA+GGG | 0.629220 | 2_2:-7760868 | None:intergenic |
| GCTGTGAAGCCAGTGATCGT+GGG | 0.629235 | 2_2:+7760763 | Msa0235020:CDS |
| AAGCGTGTGATTGCATGCAT+TGG | 0.633443 | 2_2:+7761911 | Msa0235020:CDS |
| CAGTATGTTCCAATGAAATG+TGG | 0.633740 | 2_2:-7760901 | None:intergenic |
| ATCACAGGTGAAGGGACGGA+CGG | 0.639749 | 2_2:-7759211 | None:intergenic |
| TAAGGAAAGACCATTGCCAA+TGG | 0.647139 | 2_2:-7761076 | None:intergenic |
| CGCGAACGCCGATCTCGACG+AGG | 0.647172 | 2_2:-7759263 | None:intergenic |
| AGCAAAGAGTTGCTAGAATG+GGG | 0.647655 | 2_2:+7762492 | Msa0235020:CDS |
| ACAGGTGAAGGGACGGACGG+CGG | 0.660278 | 2_2:-7759208 | None:intergenic |
| GCAGGGTAAGCAATCAGGAA+GGG | 0.661004 | 2_2:+7760698 | Msa0235020:intron |
| AATGCTGGATATGCTGCTGA+CGG | 0.662126 | 2_2:+7759381 | Msa0235020:CDS |
| GCGGATGGAGCACAACTGGG+AGG | 0.668015 | 2_2:-7759189 | None:intergenic |
| CATTTCATTGGAACATACTG+GGG | 0.673408 | 2_2:+7760904 | Msa0235020:CDS |
| GAGTGCCATCCATAATGGAG+AGG | 0.675947 | 2_2:+7762217 | Msa0235020:CDS |
| TATGGATGGCACTCACAAAG+CGG | 0.696212 | 2_2:-7762208 | None:intergenic |
| CGCTTCAAAGGAATGCCCGG+CGG | 0.703133 | 2_2:-7761192 | None:intergenic |
| GTGAGTATAGGTACGTACAG+AGG | 0.709245 | 2_2:+7762380 | Msa0235020:intron |
| GTGCCATCCATAATGGAGAG+GGG | 0.709547 | 2_2:+7762219 | Msa0235020:CDS |
| GCTCGTTACAGCAACCGACG+AGG | 0.724744 | 2_2:-7759356 | None:intergenic |
| TGTCAGTACTAGCTACTGTG+GGG | 0.752691 | 2_2:+7760930 | Msa0235020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATCATTAATTAAAG+TGG | - | chr2_2:7760586-7760605 | None:intergenic | 10.0% |
| !! | AAATAAATTAATTAATGAAC+AGG | - | chr2_2:7762023-7762042 | None:intergenic | 10.0% |
| !! | TTAATGATTATTTATCCATA+TGG | + | chr2_2:7760592-7760611 | Msa0235020:intron | 15.0% |
| !! | ACAGTAATATAGTAATTTAA+TGG | - | chr2_2:7761574-7761593 | None:intergenic | 15.0% |
| !!! | TTAATTAATTTATTTTCGGA+TGG | + | chr2_2:7762028-7762047 | Msa0235020:intron | 15.0% |
| !!! | TTTATGAAAGGGTTTTAATA+TGG | - | chr2_2:7759039-7759058 | None:intergenic | 20.0% |
| !!! | TTTTCTCTTATATATAGGAT+TGG | - | chr2_2:7759671-7759690 | None:intergenic | 20.0% |
| !!! | CTCAATTTTCTCTTATATAT+AGG | - | chr2_2:7759676-7759695 | None:intergenic | 20.0% |
| !! | AAATAATAAACGAACTTAGA+AGG | - | chr2_2:7760430-7760449 | None:intergenic | 20.0% |
| !!! | ACATTTTTACAATTATATGC+AGG | + | chr2_2:7760680-7760699 | Msa0235020:intron | 20.0% |
| !!! | CATTTTTACAATTATATGCA+GGG | + | chr2_2:7760681-7760700 | Msa0235020:intron | 20.0% |
| !! | TAACAGGATAAATCTAAAAA+AGG | - | chr2_2:7761377-7761396 | None:intergenic | 20.0% |
| !!! | TTAGGAATTGATTTTCTATT+GGG | - | chr2_2:7762556-7762575 | None:intergenic | 20.0% |
| !!! | ATTAGGAATTGATTTTCTAT+TGG | - | chr2_2:7762557-7762576 | None:intergenic | 20.0% |
| !! | TAATAAGAATTACATACAAC+AGG | - | chr2_2:7762789-7762808 | None:intergenic | 20.0% |
| !!! | GGTTTTAATATGGTTAAGTT+TGG | - | chr2_2:7759029-7759048 | None:intergenic | 25.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | + | chr2_2:7759555-7759574 | Msa0235020:CDS | 25.0% |
| !!! | TCAACAAAAGTTGATGTATT+TGG | + | chr2_2:7759696-7759715 | Msa0235020:intron | 25.0% |
| !!! | TTGGTTTAAGTTGAAGTATT+TGG | + | chr2_2:7759715-7759734 | Msa0235020:intron | 25.0% |
| !! | ATTTGGTTCAAAAATCCAAA+TGG | + | chr2_2:7759732-7759751 | Msa0235020:intron | 25.0% |
| ! | AAAATCCAAATGGATGTATA+TGG | + | chr2_2:7759742-7759761 | Msa0235020:intron | 25.0% |
| ! | AGATTCTCAATGATCAAAAT+AGG | - | chr2_2:7760084-7760103 | None:intergenic | 25.0% |
| ! | AGTCATACATTCTTTCTAAA+AGG | - | chr2_2:7760356-7760375 | None:intergenic | 25.0% |
| ! | TAGAAAGAATGTATGACTAA+TGG | + | chr2_2:7760358-7760377 | Msa0235020:intron | 25.0% |
| ! | CATTTAACATATGTCTTCAA+GGG | - | chr2_2:7760553-7760572 | None:intergenic | 25.0% |
| ! | ATTTATCCATATGGTATTCA+TGG | + | chr2_2:7760601-7760620 | Msa0235020:intron | 25.0% |
| ! | TTTGTTCATGCATTCATATT+TGG | + | chr2_2:7760630-7760649 | Msa0235020:intron | 25.0% |
| !! | ATACTCATTGTTGATAAAGA+AGG | + | chr2_2:7761020-7761039 | Msa0235020:CDS | 25.0% |
| ! | AATAGAACATTAACTCTAAG+AGG | - | chr2_2:7761231-7761250 | None:intergenic | 25.0% |
| !!! | AATATGCAATATTGTTTCTG+TGG | + | chr2_2:7761545-7761564 | Msa0235020:intron | 25.0% |
| ! | TATTTAATTGCTGAACTGAA+TGG | - | chr2_2:7761604-7761623 | None:intergenic | 25.0% |
| ! | AGCAATTAAATATGTTGAAC+AGG | + | chr2_2:7761612-7761631 | Msa0235020:intron | 25.0% |
| ! | ATACAATGTGATCAAGAATT+GGG | + | chr2_2:7762178-7762197 | Msa0235020:CDS | 25.0% |
| ! | CAAATTCTAAACTAAAACAG+TGG | - | chr2_2:7762293-7762312 | None:intergenic | 25.0% |
| !!! | CACTGTTTTAGTTTAGAATT+TGG | + | chr2_2:7762291-7762310 | Msa0235020:intron | 25.0% |
| !! | TTAGTTTAGAATTTGGTTGA+AGG | + | chr2_2:7762298-7762317 | Msa0235020:intron | 25.0% |
| !!! | AAATTCACTTTTGTGAGTAT+AGG | + | chr2_2:7762368-7762387 | Msa0235020:intron | 25.0% |
| !!! | TAGGAATTGATTTTCTATTG+GGG | - | chr2_2:7762555-7762574 | None:intergenic | 25.0% |
| ! | ATATGCATAATGCAGTAATT+AGG | - | chr2_2:7762574-7762593 | None:intergenic | 25.0% |
| !!! | TAATTTGGTGCATTTTATAG+TGG | + | chr2_2:7762627-7762646 | Msa0235020:three_prime_UTR | 25.0% |
| ! | TAGGATAAATGTGACAAAAA+TGG | + | chr2_2:7762660-7762679 | Msa0235020:three_prime_UTR | 25.0% |
| AAGTGAAGAGGTTTATGAAA+GGG | - | chr2_2:7759050-7759069 | None:intergenic | 30.0% | |
| ACACAAACTATCAAACTCAA+TGG | + | chr2_2:7759146-7759165 | Msa0235020:exon | 30.0% | |
| AAGAGTTAAATTGAAGTCAC+CGG | - | chr2_2:7759304-7759323 | None:intergenic | 30.0% | |
| GTACCATAGTCATTAGAATT+AGG | - | chr2_2:7759531-7759550 | None:intergenic | 30.0% | |
| TTGAACCATATACATCCATT+TGG | - | chr2_2:7759750-7759769 | None:intergenic | 30.0% | |
| !! | TATTGACTCAAATTTCTCAC+CGG | + | chr2_2:7759789-7759808 | Msa0235020:intron | 30.0% |
| TTCTCAAATTATTACTCCTC+CGG | - | chr2_2:7759811-7759830 | None:intergenic | 30.0% | |
| TTGAGAATCTGATGATATTG+TGG | + | chr2_2:7760094-7760113 | Msa0235020:intron | 30.0% | |
| ! | TATTGTGGTGTGAATTTTTC+AGG | + | chr2_2:7760109-7760128 | Msa0235020:intron | 30.0% |
| AAGCCTGTTTATATAAGCAT+AGG | + | chr2_2:7760203-7760222 | Msa0235020:CDS | 30.0% | |
| CAACCTATGCTTATATAAAC+AGG | - | chr2_2:7760209-7760228 | None:intergenic | 30.0% | |
| AATTATAGCATTCGTTCATG+AGG | + | chr2_2:7760471-7760490 | Msa0235020:intron | 30.0% | |
| CCATTTAACATATGTCTTCA+AGG | - | chr2_2:7760554-7760573 | None:intergenic | 30.0% | |
| CCTTGAAGACATATGTTAAA+TGG | + | chr2_2:7760551-7760570 | Msa0235020:intron | 30.0% | |
| !! | ATTAATTAAAGTGGCTCTAG+TGG | - | chr2_2:7760577-7760596 | None:intergenic | 30.0% |
| ! | ATGAAATGTGGATGATTTTC+TGG | - | chr2_2:7760892-7760911 | None:intergenic | 30.0% |
| GAAAATCATCCACATTTCAT+TGG | + | chr2_2:7760892-7760911 | Msa0235020:CDS | 30.0% | |
| ACATTTCATTGGAACATACT+GGG | + | chr2_2:7760903-7760922 | Msa0235020:CDS | 30.0% | |
| GAACTATAGTCATTGAAGAT+GGG | - | chr2_2:7760994-7761013 | None:intergenic | 30.0% | |
| CATCTTCAATGACTATAGTT+CGG | + | chr2_2:7760993-7761012 | Msa0235020:CDS | 30.0% | |
| CTTAACTGCATTGTCTAAAA+AGG | + | chr2_2:7761122-7761141 | Msa0235020:CDS | 30.0% | |
| AATTCAGTCTAGTGATTCTT+TGG | + | chr2_2:7761296-7761315 | Msa0235020:intron | 30.0% | |
| GCATTAGCTATTTACTACAA+TGG | - | chr2_2:7761348-7761367 | None:intergenic | 30.0% | |
| !! | ATGTATGTGTTGATTATGAG+TGG | + | chr2_2:7761440-7761459 | Msa0235020:intron | 30.0% |
| TGGAATTCATAACTGAAAGA+TGG | - | chr2_2:7761824-7761843 | None:intergenic | 30.0% | |
| ATCATCTTCCTCATTAACAA+TGG | + | chr2_2:7762119-7762138 | Msa0235020:CDS | 30.0% | |
| TATAACCTCCATTGTTAATG+AGG | - | chr2_2:7762130-7762149 | None:intergenic | 30.0% | |
| ATTGAAGTTGAGATTCATGA+TGG | + | chr2_2:7762152-7762171 | Msa0235020:CDS | 30.0% | |
| CAATTCTTGATCACATTGTA+TGG | - | chr2_2:7762179-7762198 | None:intergenic | 30.0% | |
| CATACAATGTGATCAAGAAT+TGG | + | chr2_2:7762177-7762196 | Msa0235020:CDS | 30.0% | |
| ! | TTGATTTTCTATTGGGGATT+AGG | - | chr2_2:7762549-7762568 | None:intergenic | 30.0% |
| TACATACAACAGGATATCAT+TGG | - | chr2_2:7762779-7762798 | None:intergenic | 30.0% | |
| GAAGTGAAGAGGTTTATGAA+AGG | - | chr2_2:7759051-7759070 | None:intergenic | 35.0% | |
| AGAGTTAAATTGAAGTCACC+GGG | - | chr2_2:7759303-7759322 | None:intergenic | 35.0% | |
| ! | TGTGTTGTGACTTTTACAGT+CGG | + | chr2_2:7759432-7759451 | Msa0235020:CDS | 35.0% |
| GGACCTAATTCTAATGACTA+TGG | + | chr2_2:7759525-7759544 | Msa0235020:CDS | 35.0% | |
| ! | TCAAACGATCACATGTTTTC+AGG | + | chr2_2:7759611-7759630 | Msa0235020:CDS | 35.0% |
| TTTGAGAACATATGTCAGAC+CGG | + | chr2_2:7759823-7759842 | Msa0235020:intron | 35.0% | |
| GTGCAAGAAAAAATGGAACA+GGG | - | chr2_2:7760271-7760290 | None:intergenic | 35.0% | |
| !!! | TTCCATTTTTTCTTGCACCA+AGG | + | chr2_2:7760273-7760292 | Msa0235020:CDS | 35.0% |
| ! | TACCTTGGTGCAAGAAAAAA+TGG | - | chr2_2:7760278-7760297 | None:intergenic | 35.0% |
| GGTAAGCAAAATACATACCT+TGG | - | chr2_2:7760293-7760312 | None:intergenic | 35.0% | |
| CAGATAACAGAAACTTCACA+AGG | - | chr2_2:7760314-7760333 | None:intergenic | 35.0% | |
| ! | GTATGACTAATGGTAGTGAT+AGG | + | chr2_2:7760368-7760387 | Msa0235020:intron | 35.0% |
| CATGATCCATGAATACCATA+TGG | - | chr2_2:7760610-7760629 | None:intergenic | 35.0% | |
| TTCTGGTACAAATCCTTTAC+CGG | - | chr2_2:7760875-7760894 | None:intergenic | 35.0% | |
| CAGTATGTTCCAATGAAATG+TGG | - | chr2_2:7760904-7760923 | None:intergenic | 35.0% | |
| CACATTTCATTGGAACATAC+TGG | + | chr2_2:7760902-7760921 | Msa0235020:CDS | 35.0% | |
| CATTTCATTGGAACATACTG+GGG | + | chr2_2:7760904-7760923 | Msa0235020:CDS | 35.0% | |
| !! | GCTGATGCTTATGTTTTTGT+TGG | + | chr2_2:7760967-7760986 | Msa0235020:CDS | 35.0% |
| CGAACTATAGTCATTGAAGA+TGG | - | chr2_2:7760995-7761014 | None:intergenic | 35.0% | |
| TTCAATGACTATAGTTCGGT+TGG | + | chr2_2:7760997-7761016 | Msa0235020:CDS | 35.0% | |
| CCTTAATTATACAGCCCAAT+CGG | + | chr2_2:7761049-7761068 | Msa0235020:CDS | 35.0% | |
| CTTAATTATACAGCCCAATC+GGG | + | chr2_2:7761050-7761069 | Msa0235020:CDS | 35.0% | |
| TGTTCTATTCAAGCACATTC+AGG | + | chr2_2:7761242-7761261 | Msa0235020:CDS | 35.0% | |
| TCCTGTTAAATCATGTGACA+CGG | + | chr2_2:7761389-7761408 | Msa0235020:intron | 35.0% | |
| !! | GTTGATTATGAGTGGATTAG+AGG | + | chr2_2:7761448-7761467 | Msa0235020:intron | 35.0% |
| TAAAACATTGCCCAAAAACG+AGG | + | chr2_2:7761473-7761492 | Msa0235020:intron | 35.0% | |
| AACACTCAACAGCTAATCAT+CGG | - | chr2_2:7761512-7761531 | None:intergenic | 35.0% | |
| ACAGTTAAACCATGAATCTC+CGG | - | chr2_2:7761674-7761693 | None:intergenic | 35.0% | |
| TCAGACAATGTAGATTGTAG+AGG | - | chr2_2:7761778-7761797 | None:intergenic | 35.0% | |
| TATGAATTCCAGATGCAGTA+TGG | + | chr2_2:7761833-7761852 | Msa0235020:CDS | 35.0% | |
| !! | GGATGTATGATGCCTTATTT+AGG | + | chr2_2:7762049-7762068 | Msa0235020:intron | 35.0% |
| !! | ATGATGCCTTATTTAGGTGA+CGG | + | chr2_2:7762055-7762074 | Msa0235020:intron | 35.0% |
| ATTTCAACAATGATCCGTTG+TGG | + | chr2_2:7762086-7762105 | Msa0235020:CDS | 35.0% | |
| !!! | TGATGCTATTTTGTCCACAA+CGG | - | chr2_2:7762103-7762122 | None:intergenic | 35.0% |
| ATCTTCCTCATTAACAATGG+AGG | + | chr2_2:7762122-7762141 | Msa0235020:CDS | 35.0% | |
| ! | TATAGAAGTTTTTGCGCACA+AGG | + | chr2_2:7762461-7762480 | Msa0235020:CDS | 35.0% |
| ! | ATTTTCTATTGGGGATTAGG+AGG | - | chr2_2:7762546-7762565 | None:intergenic | 35.0% |
| !! | TTTGGTGCATTTTATAGTGG+AGG | + | chr2_2:7762630-7762649 | Msa0235020:three_prime_UTR | 35.0% |
| ! | TTATAGTGGAGGACATGTAT+AGG | + | chr2_2:7762641-7762660 | Msa0235020:three_prime_UTR | 35.0% |
| TTTGTGTGTGTGAAGTGAAG+AGG | - | chr2_2:7759062-7759081 | None:intergenic | 40.0% | |
| ! | CAAGTTTTCACTGTAAGCTC+CGG | - | chr2_2:7759484-7759503 | None:intergenic | 40.0% |
| AGCTTACAGTGAAAACTTGC+CGG | + | chr2_2:7759485-7759504 | Msa0235020:CDS | 40.0% | |
| ! | TTGCCGGTGATTTGTATTGT+TGG | + | chr2_2:7759501-7759520 | Msa0235020:CDS | 40.0% |
| CCTCCAACAATACAAATCAC+CGG | - | chr2_2:7759507-7759526 | None:intergenic | 40.0% | |
| ATACTTCAGTGCCATAGCAA+TGG | - | chr2_2:7759964-7759983 | None:intergenic | 40.0% | |
| AGCATAGGTTGTAATCTTCC+TGG | + | chr2_2:7760218-7760237 | Msa0235020:CDS | 40.0% | |
| AAAGTTGGATGAGGAATTCC+AGG | - | chr2_2:7760239-7760258 | None:intergenic | 40.0% | |
| ! | TTCCTCATCCAACTTTTGCT+AGG | + | chr2_2:7760243-7760262 | Msa0235020:CDS | 40.0% |
| ! | TCCTCATCCAACTTTTGCTA+GGG | + | chr2_2:7760244-7760263 | Msa0235020:CDS | 40.0% |
| GGTGCAAGAAAAAATGGAAC+AGG | - | chr2_2:7760272-7760291 | None:intergenic | 40.0% | |
| TCGTTCATGAGGTGTAAGTT+CGG | + | chr2_2:7760482-7760501 | Msa0235020:intron | 40.0% | |
| AGTTTGACCTTGGAACTTCA+AGG | + | chr2_2:7760512-7760531 | Msa0235020:intron | 40.0% | |
| GTTTGACCTTGGAACTTCAA+GGG | + | chr2_2:7760513-7760532 | Msa0235020:intron | 40.0% | |
| TATATGCAGGGTAAGCAATC+AGG | + | chr2_2:7760693-7760712 | Msa0235020:intron | 40.0% | |
| CCGATTGGGCTGTATAATTA+AGG | - | chr2_2:7761052-7761071 | None:intergenic | 40.0% | |
| TAAGGAAAGACCATTGCCAA+TGG | - | chr2_2:7761079-7761098 | None:intergenic | 40.0% | |
| ATTGGCAATGGTCTTTCCTT+AGG | + | chr2_2:7761078-7761097 | Msa0235020:CDS | 40.0% | |
| CAATGGTCTTTCCTTAGGTT+GGG | + | chr2_2:7761083-7761102 | Msa0235020:CDS | 40.0% | |
| !!! | TTCCTTAGGTTGGGTTTTCA+TGG | + | chr2_2:7761092-7761111 | Msa0235020:CDS | 40.0% |
| ACCGTGTCACATGATTTAAC+AGG | - | chr2_2:7761393-7761412 | None:intergenic | 40.0% | |
| !! | CCGTTATGTTCCTCGTTTTT+GGG | - | chr2_2:7761486-7761505 | None:intergenic | 40.0% |
| CCCAAAAACGAGGAACATAA+CGG | + | chr2_2:7761483-7761502 | Msa0235020:intron | 40.0% | |
| ! | ACCGTTATGTTCCTCGTTTT+TGG | - | chr2_2:7761487-7761506 | None:intergenic | 40.0% |
| ACTGCTGTAATAGCTGAAAC+CGG | + | chr2_2:7761652-7761671 | Msa0235020:CDS | 40.0% | |
| CAATTGATCCATACTGCATC+TGG | - | chr2_2:7761844-7761863 | None:intergenic | 40.0% | |
| CAGATGCAGTATGGATCAAT+TGG | + | chr2_2:7761842-7761861 | Msa0235020:CDS | 40.0% | |
| TGCAGTATGGATCAATTGGT+TGG | + | chr2_2:7761846-7761865 | Msa0235020:CDS | 40.0% | |
| TAATGAACAGGCTTACTTGC+TGG | - | chr2_2:7762011-7762030 | None:intergenic | 40.0% | |
| TTTGTGAGTGCCATCCATAA+TGG | + | chr2_2:7762212-7762231 | Msa0235020:CDS | 40.0% | |
| CAGCAAAGAGTTGCTAGAAT+GGG | + | chr2_2:7762491-7762510 | Msa0235020:CDS | 40.0% | |
| AGCAAAGAGTTGCTAGAATG+GGG | + | chr2_2:7762492-7762511 | Msa0235020:CDS | 40.0% | |
| ACAACAAAGTGCAACACTTG+AGG | - | chr2_2:7762733-7762752 | None:intergenic | 40.0% | |
| ATCGTTCCATCACAGGTGAA+GGG | - | chr2_2:7759222-7759241 | None:intergenic | 45.0% | |
| ! | TTCACCTGTGATGGAACGAT+GGG | + | chr2_2:7759222-7759241 | Msa0235020:CDS | 45.0% |
| AATGCTGGATATGCTGCTGA+CGG | + | chr2_2:7759381-7759400 | Msa0235020:CDS | 45.0% | |
| ! | GTTGTGACTTTTACAGTCGG+TGG | + | chr2_2:7759435-7759454 | Msa0235020:CDS | 45.0% |
| AGTATTCTCAACGCCATTGC+CGG | + | chr2_2:7759462-7759481 | Msa0235020:CDS | 45.0% | |
| ! | CCGGTGATTTGTATTGTTGG+AGG | + | chr2_2:7759504-7759523 | Msa0235020:CDS | 45.0% |
| CGAAGCTCTTGCGAAAAATC+AGG | - | chr2_2:7759585-7759604 | None:intergenic | 45.0% | |
| TGACTCAAATTTCTCACCGG+AGG | + | chr2_2:7759792-7759811 | Msa0235020:intron | 45.0% | |
| !! | CTCCACTTTGGTGCCATTAA+TGG | + | chr2_2:7759847-7759866 | Msa0235020:intron | 45.0% |
| TGCCATTAATGGCACCAAAG+TGG | - | chr2_2:7759852-7759871 | None:intergenic | 45.0% | |
| !! | ATGCAATGGTATGGTGCCAT+TGG | - | chr2_2:7759875-7759894 | None:intergenic | 45.0% |
| CACCAATGACACCATTGCTA+TGG | + | chr2_2:7759950-7759969 | Msa0235020:intron | 45.0% | |
| !! | TGCCATAGCAATGGTGTCAT+TGG | - | chr2_2:7759955-7759974 | None:intergenic | 45.0% |
| AACTAACACGTGTCAGACAG+TGG | - | chr2_2:7760005-7760024 | None:intergenic | 45.0% | |
| !!! | GGTGTGAATTTTTCAGGCAG+TGG | + | chr2_2:7760115-7760134 | Msa0235020:intron | 45.0% |
| TCAGGCAGTGGTGAATAACT+TGG | + | chr2_2:7760127-7760146 | Msa0235020:intron | 45.0% | |
| TCCCTAGCAAAAGTTGGATG+AGG | - | chr2_2:7760248-7760267 | None:intergenic | 45.0% | |
| TTCATGAGGTGTAAGTTCGG+TGG | + | chr2_2:7760485-7760504 | Msa0235020:intron | 45.0% | |
| CTTCATCCCTTGAAGTTCCA+AGG | - | chr2_2:7760522-7760541 | None:intergenic | 45.0% | |
| GCCAAAACTTAGGGTAGCAA+AGG | + | chr2_2:7760789-7760808 | Msa0235020:CDS | 45.0% | |
| ! | GCCTTTGCTACCCTAAGTTT+TGG | - | chr2_2:7760793-7760812 | None:intergenic | 45.0% |
| ! | AAAGGCACAGAAGGCTTTCA+TGG | + | chr2_2:7760807-7760826 | Msa0235020:CDS | 45.0% |
| ATGGAGTTTGCAGAAGCTAG+TGG | + | chr2_2:7760826-7760845 | Msa0235020:CDS | 45.0% | |
| GGTACAAATCCTTTACCGGA+GGG | - | chr2_2:7760871-7760890 | None:intergenic | 45.0% | |
| TGGTACAAATCCTTTACCGG+AGG | - | chr2_2:7760872-7760891 | None:intergenic | 45.0% | |
| CTGTCAGTACTAGCTACTGT+GGG | + | chr2_2:7760929-7760948 | Msa0235020:CDS | 45.0% | |
| TGTCAGTACTAGCTACTGTG+GGG | + | chr2_2:7760930-7760949 | Msa0235020:CDS | 45.0% | |
| GCAATGGTCTTTCCTTAGGT+TGG | + | chr2_2:7761082-7761101 | Msa0235020:CDS | 45.0% | |
| AGCCATGAAAACCCAACCTA+AGG | - | chr2_2:7761097-7761116 | None:intergenic | 45.0% | |
| GAAGAAAAACACCACAGCTG+TGG | + | chr2_2:7761146-7761165 | Msa0235020:CDS | 45.0% | |
| GTTGAACAGGAACTGCTAAG+TGG | + | chr2_2:7761625-7761644 | Msa0235020:intron | 45.0% | |
| TAGCTGAAACCGGAGATTCA+TGG | + | chr2_2:7761662-7761681 | Msa0235020:CDS | 45.0% | |
| ATGACTTACCCGCAATTCTC+AGG | - | chr2_2:7761712-7761731 | None:intergenic | 45.0% | |
| ! | GGATCAATTGGTTGGTCAGT+AGG | + | chr2_2:7761854-7761873 | Msa0235020:CDS | 45.0% |
| TGCTACTCTTGGATATGCAC+AGG | + | chr2_2:7761877-7761896 | Msa0235020:CDS | 45.0% | |
| AAGCGTGTGATTGCATGCAT+TGG | + | chr2_2:7761911-7761930 | Msa0235020:CDS | 45.0% | |
| ! | GTGATTGCATGCATTGGTGA+TGG | + | chr2_2:7761917-7761936 | Msa0235020:CDS | 45.0% |
| !!! | CATTGGTGATGGCAGTTTTC+AGG | + | chr2_2:7761928-7761947 | Msa0235020:CDS | 45.0% |
| TATGGATGGCACTCACAAAG+CGG | - | chr2_2:7762211-7762230 | None:intergenic | 45.0% | |
| ! | AGTGCCATCCATAATGGAGA+GGG | + | chr2_2:7762218-7762237 | Msa0235020:CDS | 45.0% |
| TTTCCCCTCTCCATTATGGA+TGG | - | chr2_2:7762225-7762244 | None:intergenic | 45.0% | |
| AGCATTTCCCCTCTCCATTA+TGG | - | chr2_2:7762229-7762248 | None:intergenic | 45.0% | |
| ! | ATAATGGAGAGGGGAAATGC+TGG | + | chr2_2:7762228-7762247 | Msa0235020:CDS | 45.0% |
| GTGAGTATAGGTACGTACAG+AGG | + | chr2_2:7762380-7762399 | Msa0235020:intron | 45.0% | |
| GAAGCAATTGCAACTGCTAC+TGG | + | chr2_2:7762414-7762433 | Msa0235020:CDS | 45.0% | |
| CCATTCTAGCAACTCTTTGC+TGG | - | chr2_2:7762493-7762512 | None:intergenic | 45.0% | |
| CCAGCAAAGAGTTGCTAGAA+TGG | + | chr2_2:7762490-7762509 | Msa0235020:CDS | 45.0% | |
| TCTATTGGGGATTAGGAGGA+CGG | - | chr2_2:7762542-7762561 | None:intergenic | 45.0% | |
| TGCAACACTTGAGGACAAGA+TGG | - | chr2_2:7762724-7762743 | None:intergenic | 45.0% | |
| !!! | TTCATTAATTAATTTATTTT+CGG | + | chr2_2:7762024-7762043 | Msa0235020:intron | 5.0% |
| !!! | TATAATTTGTATATTTAATT+TGG | + | chr2_2:7762612-7762631 | Msa0235020:three_prime_UTR | 5.0% |
| TTCCATCACAGGTGAAGGGA+CGG | - | chr2_2:7759218-7759237 | None:intergenic | 50.0% | |
| CATCGTTCCATCACAGGTGA+AGG | - | chr2_2:7759223-7759242 | None:intergenic | 50.0% | |
| ! | CTTCACCTGTGATGGAACGA+TGG | + | chr2_2:7759221-7759240 | Msa0235020:CDS | 50.0% |
| TGCTGTAACGAGCTGAATGC+TGG | + | chr2_2:7759366-7759385 | Msa0235020:CDS | 50.0% | |
| TTCACTGTAAGCTCCGGCAA+TGG | - | chr2_2:7759478-7759497 | None:intergenic | 50.0% | |
| AATGGCACCAAAGTGGAGTC+CGG | - | chr2_2:7759845-7759864 | None:intergenic | 50.0% | |
| !! | GGTGCCATTAATGGCACCAA+TGG | + | chr2_2:7759856-7759875 | Msa0235020:intron | 50.0% |
| !! | GGTGCCATTGGTGCCATTAA+TGG | - | chr2_2:7759863-7759882 | None:intergenic | 50.0% |
| ! | GTGGTGGAGATGCAATGGTA+TGG | - | chr2_2:7759884-7759903 | None:intergenic | 50.0% |
| ! | TGTGTGTGGTGGAGATGCAA+TGG | - | chr2_2:7759889-7759908 | None:intergenic | 50.0% |
| CACACATCCCCACACATCAA+CGG | + | chr2_2:7759909-7759928 | Msa0235020:intron | 50.0% | |
| AATCCTGGCCGTTGATGTGT+GGG | - | chr2_2:7759920-7759939 | None:intergenic | 50.0% | |
| !! | AACGGCCAGGATTGGTTCTT+TGG | + | chr2_2:7759927-7759946 | Msa0235020:intron | 50.0% |
| ! | TGGTGCCAAAGAACCAATCC+TGG | - | chr2_2:7759935-7759954 | None:intergenic | 50.0% |
| GGCAGTGGTGAATAACTTGG+AGG | + | chr2_2:7760130-7760149 | Msa0235020:intron | 50.0% | |
| ACAGGGTCCCTAGCAAAAGT+TGG | - | chr2_2:7760254-7760273 | None:intergenic | 50.0% | |
| TGCAGGGTAAGCAATCAGGA+AGG | + | chr2_2:7760697-7760716 | Msa0235020:intron | 50.0% | |
| GCAGGGTAAGCAATCAGGAA+GGG | + | chr2_2:7760698-7760717 | Msa0235020:intron | 50.0% | |
| AGAAGCAGCTGTCGAAGAAG+CGG | + | chr2_2:7760723-7760742 | Msa0235020:CDS | 50.0% | |
| ! | TAGGGTAGCAAAGGCACAGA+AGG | + | chr2_2:7760798-7760817 | Msa0235020:CDS | 50.0% |
| CCAATAGCTGTAATGCCCTC+CGG | + | chr2_2:7760853-7760872 | Msa0235020:CDS | 50.0% | |
| GCTGTCAGTACTAGCTACTG+TGG | + | chr2_2:7760928-7760947 | Msa0235020:CDS | 50.0% | |
| TTGCCAATGGTGACCCGATT+GGG | - | chr2_2:7761066-7761085 | None:intergenic | 50.0% | |
| ATTGCCAATGGTGACCCGAT+TGG | - | chr2_2:7761067-7761086 | None:intergenic | 50.0% | |
| AATCGGGTCACCATTGGCAA+TGG | + | chr2_2:7761066-7761085 | Msa0235020:CDS | 50.0% | |
| ACGGTAATTCTCCACAGCTG+TGG | - | chr2_2:7761160-7761179 | None:intergenic | 50.0% | |
| CCGGCGGAACATAGATTCTA+CGG | - | chr2_2:7761179-7761198 | None:intergenic | 50.0% | |
| CCGTAGAATCTATGTTCCGC+CGG | + | chr2_2:7761176-7761195 | Msa0235020:CDS | 50.0% | |
| CGTAGAATCTATGTTCCGCC+GGG | + | chr2_2:7761177-7761196 | Msa0235020:CDS | 50.0% | |
| !! | CATTCCTTTGAAGCGGGAGA+AGG | + | chr2_2:7761200-7761219 | Msa0235020:CDS | 50.0% |
| TCATCCTTCTCCCGCTTCAA+AGG | - | chr2_2:7761207-7761226 | None:intergenic | 50.0% | |
| CTCCGTTTGCCTGAGAATTG+CGG | + | chr2_2:7761700-7761719 | Msa0235020:CDS | 50.0% | |
| TCCGTTTGCCTGAGAATTGC+GGG | + | chr2_2:7761701-7761720 | Msa0235020:CDS | 50.0% | |
| ACCCGCAATTCTCAGGCAAA+CGG | - | chr2_2:7761705-7761724 | None:intergenic | 50.0% | |
| !! | TGGTCAGTAGGTGCTACTCT+TGG | + | chr2_2:7761866-7761885 | Msa0235020:CDS | 50.0% |
| CCTGTGCCGTCACCTAAATA+AGG | - | chr2_2:7762064-7762083 | None:intergenic | 50.0% | |
| ! | CCTTATTTAGGTGACGGCAC+AGG | + | chr2_2:7762061-7762080 | Msa0235020:intron | 50.0% |
| ATGGATGGCACTCACAAAGC+GGG | - | chr2_2:7762210-7762229 | None:intergenic | 50.0% | |
| ! | GAGTGCCATCCATAATGGAG+AGG | + | chr2_2:7762217-7762236 | Msa0235020:CDS | 50.0% |
| ! | GTGCCATCCATAATGGAGAG+GGG | + | chr2_2:7762219-7762238 | Msa0235020:CDS | 50.0% |
| AGTTGCTAGAATGGGGATCC+CGG | + | chr2_2:7762499-7762518 | Msa0235020:CDS | 50.0% | |
| ATGGAGCACAACTGGGAGGA+GGG | - | chr2_2:7759188-7759207 | None:intergenic | 55.0% | |
| ATCACAGGTGAAGGGACGGA+CGG | - | chr2_2:7759214-7759233 | None:intergenic | 55.0% | |
| ! | ACCTGTGATGGAACGATGGG+CGG | + | chr2_2:7759225-7759244 | Msa0235020:CDS | 55.0% |
| CGCGATGTCTTCTCTGTTCC+CGG | + | chr2_2:7759282-7759301 | Msa0235020:CDS | 55.0% | |
| TGTCAGACCGGACTCCACTT+TGG | + | chr2_2:7759835-7759854 | Msa0235020:intron | 55.0% | |
| TGTGGGGATGTGTGTGTGTG+TGG | - | chr2_2:7759903-7759922 | None:intergenic | 55.0% | |
| ATCCTGGCCGTTGATGTGTG+GGG | - | chr2_2:7759919-7759938 | None:intergenic | 55.0% | |
| CAATCCTGGCCGTTGATGTG+TGG | - | chr2_2:7759921-7759940 | None:intergenic | 55.0% | |
| CACACATCAACGGCCAGGAT+TGG | + | chr2_2:7759919-7759938 | Msa0235020:intron | 55.0% | |
| ACAGTGGCATGGGTCTGACA+GGG | - | chr2_2:7759989-7760008 | None:intergenic | 55.0% | |
| CACGTGTCAGACAGTGGCAT+GGG | - | chr2_2:7759999-7760018 | None:intergenic | 55.0% | |
| ACACGTGTCAGACAGTGGCA+TGG | - | chr2_2:7760000-7760019 | None:intergenic | 55.0% | |
| CGGTGGTACGAGTTTGACCT+TGG | + | chr2_2:7760502-7760521 | Msa0235020:intron | 55.0% | |
| AGCTGTGAAGCCAGTGATCG+TGG | + | chr2_2:7760762-7760781 | Msa0235020:CDS | 55.0% | |
| GCTGTGAAGCCAGTGATCGT+GGG | + | chr2_2:7760763-7760782 | Msa0235020:CDS | 55.0% | |
| !! | CCGGAGGGCATTACAGCTAT+TGG | - | chr2_2:7760856-7760875 | None:intergenic | 55.0% |
| GCTGTAATGCCCTCCGGTAA+AGG | + | chr2_2:7760859-7760878 | Msa0235020:CDS | 55.0% | |
| TCCCGCTTCAAAGGAATGCC+CGG | - | chr2_2:7761198-7761217 | None:intergenic | 55.0% | |
| GGGGAAATGCTGGACTGCTA+AGG | + | chr2_2:7762238-7762257 | Msa0235020:CDS | 55.0% | |
| GTTGCTAGAATGGGGATCCC+GGG | + | chr2_2:7762500-7762519 | Msa0235020:CDS | 55.0% | |
| GATGGAGCACAACTGGGAGG+AGG | - | chr2_2:7759189-7759208 | None:intergenic | 60.0% | |
| ACGGCGGATGGAGCACAACT+GGG | - | chr2_2:7759195-7759214 | None:intergenic | 60.0% | |
| GTCCGTCCCTTCACCTGTGA+TGG | + | chr2_2:7759213-7759232 | Msa0235020:CDS | 60.0% | |
| TGACCACCTGATCGCTGAGC+CGG | + | chr2_2:7759326-7759345 | Msa0235020:CDS | 60.0% | |
| CAACCGACGAGGTTGAGCTC+CGG | - | chr2_2:7759348-7759367 | None:intergenic | 60.0% | |
| GCTCGTTACAGCAACCGACG+AGG | - | chr2_2:7759359-7759378 | None:intergenic | 60.0% | |
| TGACGGTTACGCACGTGCCA+AGG | + | chr2_2:7759398-7759417 | Msa0235020:CDS | 60.0% | |
| GACGGTTACGCACGTGCCAA+GGG | + | chr2_2:7759399-7759418 | Msa0235020:CDS | 60.0% | |
| TACGCACGTGCCAAGGGAGT+TGG | + | chr2_2:7759405-7759424 | Msa0235020:CDS | 60.0% | |
| AACACACGCGCCAACTCCCT+TGG | - | chr2_2:7759418-7759437 | None:intergenic | 60.0% | |
| GGGGATGTGTGTGTGTGTGG+TGG | - | chr2_2:7759900-7759919 | None:intergenic | 60.0% | |
| ATCCCCACACATCAACGGCC+AGG | + | chr2_2:7759914-7759933 | Msa0235020:intron | 60.0% | |
| GACAGTGGCATGGGTCTGAC+AGG | - | chr2_2:7759990-7760009 | None:intergenic | 60.0% | |
| GTGAAGCCAGTGATCGTGGG+CGG | + | chr2_2:7760766-7760785 | Msa0235020:CDS | 60.0% | |
| TGAAGCCAGTGATCGTGGGC+GGG | + | chr2_2:7760767-7760786 | Msa0235020:CDS | 60.0% | |
| TCGTGGGCGGGCCAAAACTT+AGG | + | chr2_2:7760779-7760798 | Msa0235020:CDS | 60.0% | |
| CGTGGGCGGGCCAAAACTTA+GGG | + | chr2_2:7760780-7760799 | Msa0235020:CDS | 60.0% | |
| CAGCCCAATCGGGTCACCAT+TGG | + | chr2_2:7761060-7761079 | Msa0235020:CDS | 60.0% | |
| CGCTTCAAAGGAATGCCCGG+CGG | - | chr2_2:7761195-7761214 | None:intergenic | 60.0% | |
| ! | CGCCGGGCATTCCTTTGAAG+CGG | + | chr2_2:7761193-7761212 | Msa0235020:CDS | 60.0% |
| !! | GCCGGGCATTCCTTTGAAGC+GGG | + | chr2_2:7761194-7761213 | Msa0235020:CDS | 60.0% |
| GCTGTTAGCAGCAGCAACCC+GGG | - | chr2_2:7762520-7762539 | None:intergenic | 60.0% | |
| GGCTGTTAGCAGCAGCAACC+CGG | - | chr2_2:7762521-7762540 | None:intergenic | 60.0% | |
| GCGGATGGAGCACAACTGGG+AGG | - | chr2_2:7759192-7759211 | None:intergenic | 65.0% | |
| GACGGCGGATGGAGCACAAC+TGG | - | chr2_2:7759196-7759215 | None:intergenic | 65.0% | |
| ACAGGTGAAGGGACGGACGG+CGG | - | chr2_2:7759211-7759230 | None:intergenic | 65.0% | |
| GCCGCCCATCGTTCCATCAC+AGG | - | chr2_2:7759229-7759248 | None:intergenic | 65.0% | |
| TGAGCTCCGGCTCAGCGATC+AGG | - | chr2_2:7759335-7759354 | None:intergenic | 65.0% | |
| GAGCCGGAGCTCAACCTCGT+CGG | + | chr2_2:7759342-7759361 | Msa0235020:CDS | 65.0% | |
| TTTGGCCCGCCCACGATCAC+TGG | - | chr2_2:7760775-7760794 | None:intergenic | 65.0% | |
| GTGAAGGGACGGACGGCGGA+TGG | - | chr2_2:7759207-7759226 | None:intergenic | 70.0% | |
| CGATGGGCGGCCACCTTGCA+CGG | + | chr2_2:7759238-7759257 | Msa0235020:CDS | 70.0% | |
| !! | TCTCGACGAGGCGCCGTGCA+AGG | - | chr2_2:7759254-7759273 | None:intergenic | 70.0% |
| GCACGGCGCCTCGTCGAGAT+CGG | + | chr2_2:7759255-7759274 | Msa0235020:CDS | 70.0% | |
| CGCGAACGCCGATCTCGACG+AGG | - | chr2_2:7759266-7759285 | None:intergenic | 70.0% | |
| GCTCCGGCTCAGCGATCAGG+TGG | - | chr2_2:7759332-7759351 | None:intergenic | 70.0% | |
| !! | CGACGAGGCGCCGTGCAAGG+TGG | - | chr2_2:7759251-7759270 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 7759024 | 7762843 | 7759024 | ID=Msa0235020;Name=Msa0235020 |
| chr2_2 | mRNA | 7759024 | 7762843 | 7759024 | ID=Msa0235020-mRNA-1;Parent=Msa0235020;Name=Msa0235020-mRNA-1;_AED=0.02;_eAED=0.02;_QI=141|1|1|1|1|1|7|283|586 |
| chr2_2 | exon | 7759024 | 7759632 | 7759024 | ID=Msa0235020-mRNA-1:exon:3368;Parent=Msa0235020-mRNA-1 |
| chr2_2 | exon | 7760131 | 7760294 | 7760131 | ID=Msa0235020-mRNA-1:exon:3369;Parent=Msa0235020-mRNA-1 |
| chr2_2 | exon | 7760702 | 7761263 | 7760702 | ID=Msa0235020-mRNA-1:exon:3370;Parent=Msa0235020-mRNA-1 |
| chr2_2 | exon | 7761634 | 7761722 | 7761634 | ID=Msa0235020-mRNA-1:exon:3371;Parent=Msa0235020-mRNA-1 |
| chr2_2 | exon | 7761832 | 7761949 | 7761832 | ID=Msa0235020-mRNA-1:exon:3372;Parent=Msa0235020-mRNA-1 |
| chr2_2 | exon | 7762071 | 7762259 | 7762071 | ID=Msa0235020-mRNA-1:exon:3373;Parent=Msa0235020-mRNA-1 |
| chr2_2 | exon | 7762390 | 7762843 | 7762390 | ID=Msa0235020-mRNA-1:exon:3374;Parent=Msa0235020-mRNA-1 |
| chr2_2 | five_prime_UTR | 7759024 | 7759164 | 7759024 | ID=Msa0235020-mRNA-1:five_prime_utr;Parent=Msa0235020-mRNA-1 |
| chr2_2 | CDS | 7759165 | 7759632 | 7759165 | ID=Msa0235020-mRNA-1:cds;Parent=Msa0235020-mRNA-1 |
| chr2_2 | CDS | 7760131 | 7760294 | 7760131 | ID=Msa0235020-mRNA-1:cds;Parent=Msa0235020-mRNA-1 |
| chr2_2 | CDS | 7760702 | 7761263 | 7760702 | ID=Msa0235020-mRNA-1:cds;Parent=Msa0235020-mRNA-1 |
| chr2_2 | CDS | 7761634 | 7761722 | 7761634 | ID=Msa0235020-mRNA-1:cds;Parent=Msa0235020-mRNA-1 |
| chr2_2 | CDS | 7761832 | 7761949 | 7761832 | ID=Msa0235020-mRNA-1:cds;Parent=Msa0235020-mRNA-1 |
| chr2_2 | CDS | 7762071 | 7762259 | 7762071 | ID=Msa0235020-mRNA-1:cds;Parent=Msa0235020-mRNA-1 |
| chr2_2 | CDS | 7762390 | 7762560 | 7762390 | ID=Msa0235020-mRNA-1:cds;Parent=Msa0235020-mRNA-1 |
| chr2_2 | three_prime_UTR | 7762561 | 7762843 | 7762561 | ID=Msa0235020-mRNA-1:three_prime_utr;Parent=Msa0235020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
