Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273420 | XP_003593734.1 | 97.611 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273420 | sp|P51850|PDC1_PEA | 94.266 | 593 | 27 | 2 | 1 | 586 | 1 | 593 | 0.0 | 1132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273420 | G7IKA3 | 97.611 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1180 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025060 | Msa0273420 | -0.858288 | 9.130300e-63 | -8.615850e-47 |
| Msa0025090 | Msa0273420 | -0.809183 | 2.146339e-50 | -8.615850e-47 |
| Msa0026120 | Msa0273420 | -0.801540 | 8.580116e-49 | -8.615850e-47 |
| Msa0032040 | Msa0273420 | -0.827868 | 1.233712e-54 | -8.615850e-47 |
| Msa0036560 | Msa0273420 | -0.812427 | 4.263986e-51 | -8.615850e-47 |
| Msa0040190 | Msa0273420 | -0.818713 | 1.698192e-52 | -8.615850e-47 |
| Msa0072710 | Msa0273420 | -0.816143 | 6.437740e-52 | -8.615850e-47 |
| Msa0106810 | Msa0273420 | -0.826899 | 2.105746e-54 | -8.615850e-47 |
| Msa0121080 | Msa0273420 | -0.800197 | 1.613583e-48 | -8.615850e-47 |
| Msa0126760 | Msa0273420 | -0.802526 | 5.380709e-49 | -8.615850e-47 |
| Msa0131800 | Msa0273420 | 0.811939 | 5.446186e-51 | -8.615850e-47 |
| Msa0134550 | Msa0273420 | -0.818054 | 2.394734e-52 | -8.615850e-47 |
| Msa0139280 | Msa0273420 | -0.826757 | 2.277212e-54 | -8.615850e-47 |
| Msa0153290 | Msa0273420 | -0.815691 | 8.119672e-52 | -8.615850e-47 |
| Msa0166580 | Msa0273420 | -0.802423 | 5.651324e-49 | -8.615850e-47 |
| Msa0173260 | Msa0273420 | 0.845720 | 3.404983e-59 | -8.615850e-47 |
| Msa0174800 | Msa0273420 | -0.807071 | 6.044705e-50 | -8.615850e-47 |
| Msa0176610 | Msa0273420 | -0.828356 | 9.408259e-55 | -8.615850e-47 |
| Msa0192890 | Msa0273420 | 0.964512 | 2.022083e-123 | -8.615850e-47 |
| Msa0196530 | Msa0273420 | 0.809202 | 2.125693e-50 | -8.615850e-47 |
| Msa0206600 | Msa0273420 | -0.826985 | 2.008517e-54 | -8.615850e-47 |
| Msa0218480 | Msa0273420 | -0.803025 | 4.243661e-49 | -8.615850e-47 |
| Msa0218590 | Msa0273420 | -0.807635 | 4.590726e-50 | -8.615850e-47 |
| Msa0222720 | Msa0273420 | -0.808527 | 2.964400e-50 | -8.615850e-47 |
| Msa0226580 | Msa0273420 | -0.816897 | 4.362998e-52 | -8.615850e-47 |
| Msa0235020 | Msa0273420 | 0.998419 | 1.548570e-264 | -8.615850e-47 |
| Msa0238420 | Msa0273420 | 0.848620 | 5.459109e-60 | -8.615850e-47 |
| Msa0251140 | Msa0273420 | -0.804499 | 2.097534e-49 | -8.615850e-47 |
| Msa0261200 | Msa0273420 | -0.807572 | 4.735245e-50 | -8.615850e-47 |
| Msa0264020 | Msa0273420 | -0.805661 | 1.198379e-49 | -8.615850e-47 |
| Msa0266380 | Msa0273420 | -0.801701 | 7.951846e-49 | -8.615850e-47 |
| Msa0273420 | Msa0313680 | 0.977880 | 1.129911e-144 | -8.615850e-47 |
| Msa0273420 | Msa0372250 | -0.818810 | 1.613864e-52 | -8.615850e-47 |
| Msa0273420 | Msa0375500 | 0.832272 | 1.039243e-55 | -8.615850e-47 |
| Msa0273420 | Msa0384220 | 0.828517 | 8.602990e-55 | -8.615850e-47 |
| Msa0273420 | Msa0423590 | -0.805823 | 1.108065e-49 | -8.615850e-47 |
| Msa0273420 | Msa0424300 | 0.817394 | 3.373934e-52 | -8.615850e-47 |
| Msa0273420 | Msa0433600 | -0.802460 | 5.550582e-49 | -8.615850e-47 |
| Msa0273420 | Msa0434890 | 0.864429 | 1.223746e-64 | -8.615850e-47 |
| Msa0273420 | Msa0437850 | -0.801866 | 7.355909e-49 | -8.615850e-47 |
| Msa0273420 | Msa0471210 | 0.851336 | 9.482804e-61 | -8.615850e-47 |
| Msa0273420 | Msa0475830 | -0.823401 | 1.412997e-53 | -8.615850e-47 |
| Msa0273420 | Msa0498320 | -0.803286 | 3.748515e-49 | -8.615850e-47 |
| Msa0273420 | Msa0512430 | -0.809465 | 1.866732e-50 | -8.615850e-47 |
| Msa0273420 | Msa0515930 | 0.817801 | 2.731668e-52 | -8.615850e-47 |
| Msa0273420 | Msa0521100 | -0.808148 | 3.570543e-50 | -8.615850e-47 |
| Msa0273420 | Msa0532310 | 0.818454 | 1.943517e-52 | -8.615850e-47 |
| Msa0273420 | Msa0568810 | -0.824067 | 9.867463e-54 | -8.615850e-47 |
| Msa0273420 | Msa0576150 | -0.830328 | 3.123692e-55 | -8.615850e-47 |
| Msa0273420 | Msa0587060 | -0.814614 | 1.408323e-51 | -8.615850e-47 |
| Msa0273420 | Msa0599250 | -0.804459 | 2.138262e-49 | -8.615850e-47 |
| Msa0273420 | Msa0601710 | -0.801891 | 7.268800e-49 | -8.615850e-47 |
| Msa0273420 | Msa0605020 | 0.847586 | 1.052757e-59 | -8.615850e-47 |
| Msa0273420 | Msa0624890 | -0.809928 | 1.484670e-50 | -8.615850e-47 |
| Msa0273420 | Msa0639880 | -0.817128 | 3.872894e-52 | -8.615850e-47 |
| Msa0273420 | Msa0646670 | 0.850178 | 2.008264e-60 | -8.615850e-47 |
| Msa0273420 | Msa0657820 | -0.802638 | 5.101356e-49 | -8.615850e-47 |
| Msa0273420 | Msa0665010 | -0.808256 | 3.385762e-50 | -8.615850e-47 |
| Msa0273420 | Msa0667240 | 0.831312 | 1.792651e-55 | -8.615850e-47 |
| Msa0273420 | Msa0681040 | -0.811979 | 5.337865e-51 | -8.615850e-47 |
| Msa0273420 | Msa0709820 | 0.881011 | 3.421010e-70 | -8.615850e-47 |
| Msa0273420 | Msa0712440 | -0.811458 | 6.931940e-51 | -8.615850e-47 |
| Msa0273420 | Msa0747500 | 0.855239 | 7.210851e-62 | -8.615850e-47 |
| Msa0273420 | Msa0749900 | -0.804905 | 1.725824e-49 | -8.615850e-47 |
| Msa0273420 | Msa0753410 | 0.802939 | 4.421555e-49 | -8.615850e-47 |
| Msa0273420 | Msa0753530 | -0.803280 | 3.758157e-49 | -8.615850e-47 |
| Msa0273420 | Msa0770890 | -0.805144 | 1.538043e-49 | -8.615850e-47 |
| Msa0273420 | Msa0795330 | 0.803469 | 3.434296e-49 | -8.615850e-47 |
| Msa0273420 | Msa0807170 | -0.805762 | 1.141704e-49 | -8.615850e-47 |
| Msa0273420 | Msa0814350 | 0.801008 | 1.102353e-48 | -8.615850e-47 |
| Msa0273420 | Msa0830450 | -0.800557 | 1.362660e-48 | -8.615850e-47 |
| Msa0273420 | Msa0854860 | 0.815201 | 1.043720e-51 | -8.615850e-47 |
| Msa0273420 | Msa0882340 | -0.812956 | 3.264873e-51 | -8.615850e-47 |
| Msa0273420 | Msa0896990 | 0.846919 | 1.605266e-59 | -8.615850e-47 |
| Msa0273420 | Msa0962260 | 0.814245 | 1.699318e-51 | -8.615850e-47 |
| Msa0273420 | Msa0996940 | 0.814683 | 1.359615e-51 | -8.615850e-47 |
| Msa0273420 | Msa1034870 | 0.818315 | 2.090534e-52 | -8.615850e-47 |
| Msa0273420 | Msa1039650 | 0.807329 | 5.332113e-50 | -8.615850e-47 |
| Msa0273420 | Msa1064420 | -0.814321 | 1.635123e-51 | -8.615850e-47 |
| Msa0273420 | Msa1067040 | 0.815671 | 8.204052e-52 | -8.615850e-47 |
| Msa0273420 | Msa1081650 | -0.808465 | 3.056696e-50 | -8.615850e-47 |
| Msa0273420 | Msa1117280 | -0.809236 | 2.090209e-50 | -8.615850e-47 |
| Msa0273420 | Msa1151970 | -0.811421 | 7.060978e-51 | -8.615850e-47 |
| Msa0273420 | Msa1161520 | -0.801437 | 9.009379e-49 | -8.615850e-47 |
| Msa0273420 | Msa1182400 | -0.802867 | 4.575166e-49 | -8.615850e-47 |
| Msa0273420 | Msa1192790 | -0.807625 | 4.613193e-50 | -8.615850e-47 |
| Msa0273420 | Msa1198820 | -0.812296 | 4.554209e-51 | -8.615850e-47 |
| Msa0273420 | Msa1203090 | -0.833733 | 4.501648e-56 | -8.615850e-47 |
| Msa0273420 | Msa1208250 | -0.818496 | 1.901615e-52 | -8.615850e-47 |
| Msa0273420 | Msa1221570 | 0.808881 | 2.490396e-50 | -8.615850e-47 |
| Msa0273420 | Msa1223600 | -0.816010 | 6.893034e-52 | -8.615850e-47 |
| Msa0273420 | Msa1230190 | -0.811279 | 7.579313e-51 | -8.615850e-47 |
| Msa0273420 | Msa1252220 | -0.804373 | 2.229125e-49 | -8.615850e-47 |
| Msa0273420 | Msa1258600 | 0.854295 | 1.354054e-61 | -8.615850e-47 |
| Msa0273420 | Msa1298440 | 0.840671 | 7.555441e-58 | -8.615850e-47 |
| Msa0273420 | Msa1304980 | 0.830287 | 3.197344e-55 | -8.615850e-47 |
| Msa0273420 | Msa1319440 | -0.849924 | 2.365293e-60 | -8.615850e-47 |
| Msa0273420 | Msa1327400 | -0.810685 | 1.019386e-50 | -8.615850e-47 |
| Msa0273420 | Msa1327420 | -0.809572 | 1.770580e-50 | -8.615850e-47 |
| Msa0273420 | Msa1357380 | -0.819392 | 1.189615e-52 | -8.615850e-47 |
| Msa0273420 | Msa1366700 | -0.808424 | 3.118073e-50 | -8.615850e-47 |
| Msa0273420 | Msa1368800 | -0.806309 | 8.755603e-50 | -8.615850e-47 |
| Msa0273420 | Msa1392990 | -0.809548 | 1.792264e-50 | -8.615850e-47 |
| Msa0273420 | Msa1395700 | -0.849083 | 4.059655e-60 | -8.615850e-47 |
| Msa0273420 | Msa1400600 | -0.817060 | 4.009804e-52 | -8.615850e-47 |
| Msa0273420 | Msa1400940 | 0.858336 | 8.833558e-63 | -8.615850e-47 |
| Msa0273420 | Msa1402000 | 0.807570 | 4.738685e-50 | -8.615850e-47 |
| Msa0273420 | Msa1415120 | -0.800899 | 1.160762e-48 | -8.615850e-47 |
| Msa0273420 | Msa1426690 | -0.805730 | 1.159222e-49 | -8.615850e-47 |
| Msa0273420 | Msa1432250 | -0.813759 | 2.175338e-51 | -8.615850e-47 |
| Msa0273420 | Msa1433380 | -0.808219 | 3.449122e-50 | -8.615850e-47 |
| Msa0273420 | Msa1437650 | -0.806858 | 6.706213e-50 | -8.615850e-47 |
| Msa0273420 | Msa1449510 | -0.817228 | 3.676981e-52 | -8.615850e-47 |
| Msa0273420 | Msa1450420 | -0.805586 | 1.242590e-49 | -8.615850e-47 |
| Msa0273420 | Msa1450710 | 0.811481 | 6.852966e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273420 | MtrunA17_Chr2g0283471 | 97.611 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1180 |
| Msa0273420 | MtrunA17_Chr7g0242961 | 82.155 | 566 | 101 | 0 | 21 | 586 | 38 | 603 | 0.0 | 984 |
| Msa0273420 | MtrunA17_Chr4g0007071 | 78.223 | 574 | 125 | 0 | 13 | 586 | 34 | 607 | 0.0 | 952 |
| Msa0273420 | MtrunA17_Chr5g0420011 | 78.049 | 574 | 126 | 0 | 13 | 586 | 34 | 607 | 0.0 | 950 |
| Msa0273420 | MtrunA17_Chr7g0242981 | 75.815 | 583 | 120 | 2 | 4 | 586 | 28 | 589 | 0.0 | 915 |
| Msa0273420 | MtrunA17_Chr2g0279461 | 65.116 | 215 | 47 | 1 | 25 | 211 | 51 | 265 | 5.65e-99 | 301 |
| Msa0273420 | MtrunA17_Chr2g0279471 | 67.241 | 116 | 38 | 0 | 468 | 583 | 17 | 132 | 2.64e-49 | 167 |
| Msa0273420 | MtrunA17_Chr2g0290681 | 23.230 | 551 | 369 | 16 | 30 | 547 | 67 | 596 | 3.48e-17 | 85.1 |
| Msa0273420 | MtrunA17_Chr3g0132201 | 23.178 | 535 | 357 | 15 | 9 | 512 | 57 | 568 | 5.96e-17 | 84.3 |
| Msa0273420 | MtrunA17_Chr2g0281881 | 22.656 | 512 | 340 | 16 | 30 | 512 | 88 | 572 | 9.24e-15 | 77.4 |
| Msa0273420 | MtrunA17_Chr6g0449041 | 22.835 | 508 | 310 | 21 | 31 | 492 | 11 | 482 | 8.96e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273420 | AT5G54960.1 | 81.062 | 565 | 107 | 0 | 22 | 586 | 43 | 607 | 0.0 | 974 |
| Msa0273420 | AT5G01320.1 | 78.559 | 583 | 120 | 1 | 9 | 586 | 21 | 603 | 0.0 | 964 |
| Msa0273420 | AT4G33070.1 | 78.646 | 576 | 123 | 0 | 11 | 586 | 32 | 607 | 0.0 | 963 |
| Msa0273420 | AT5G01330.1 | 77.975 | 563 | 124 | 0 | 24 | 586 | 30 | 592 | 0.0 | 935 |
| Msa0273420 | AT3G48560.1 | 22.563 | 554 | 368 | 17 | 30 | 547 | 103 | 631 | 4.97e-13 | 72.4 |
Find 172 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAATTTGTATATTTAATT+TGG | 0.147828 | 2_3:+4948006 | Msa0273420:three_prime_UTR |
| CTTAACTGCATTGTCTAAAA+AGG | 0.176719 | 2_3:+4946516 | Msa0273420:CDS |
| CCGATTGGGCTGTATAATTA+AGG | 0.241271 | 2_3:-4946443 | None:intergenic |
| CGCGATGTCTTCTCTGTTCC+CGG | 0.267229 | 2_3:+4944675 | Msa0273420:CDS |
| AGCATTTCCCCTCTCCATTA+TGG | 0.274068 | 2_3:-4947620 | None:intergenic |
| GCCTTTGCTACCCTAAGTTT+TGG | 0.287789 | 2_3:-4946184 | None:intergenic |
| CACATTTCATTGGAACATAC+TGG | 0.298376 | 2_3:+4946296 | Msa0273420:CDS |
| CCATTCTAGCAACTCTTTGC+TGG | 0.311297 | 2_3:-4947884 | None:intergenic |
| AGAATTCTTCATCATACTAT+TGG | 0.312759 | 2_3:+4944948 | Msa0273420:CDS |
| TGTTCTATTCAAGCACATTC+AGG | 0.312908 | 2_3:+4946636 | Msa0273420:CDS |
| CCGGAGGGCATTACAGCTAT+TGG | 0.321768 | 2_3:-4946247 | None:intergenic |
| TTCTGGTACAAGTCCTTTAC+CGG | 0.332305 | 2_3:-4946266 | None:intergenic |
| GACGGCGGATGGAGCACAAC+TGG | 0.332857 | 2_3:-4944586 | None:intergenic |
| CATACAATGTGATCAAGAAT+TGG | 0.342392 | 2_3:+4947571 | Msa0273420:CDS |
| ATTGGCAATGGTCTTTCCTT+AGG | 0.347746 | 2_3:+4946472 | Msa0273420:CDS |
| CAATGGTCTTTCCTTAGGTT+GGG | 0.348448 | 2_3:+4946477 | Msa0273420:CDS |
| ATATGCATAATGCAGTAATT+AGG | 0.356907 | 2_3:-4947965 | None:intergenic |
| TCCGTTTGCCTGAGAATTGC+GGG | 0.357039 | 2_3:+4947095 | Msa0273420:CDS |
| GCAATGGTCTTTCCTTAGGT+TGG | 0.372204 | 2_3:+4946476 | Msa0273420:CDS |
| GTACCATAGTCATTAGAATT+AGG | 0.372904 | 2_3:-4944921 | None:intergenic |
| CAACCTATGCTTATATAAAC+AGG | 0.377211 | 2_3:-4945600 | None:intergenic |
| AGTATTCTCAACGCCATTGC+CGG | 0.382049 | 2_3:+4944855 | Msa0273420:CDS |
| CAATTCTTGATCACATTGTA+TGG | 0.382941 | 2_3:-4947570 | None:intergenic |
| GAAAATCATCCACATTTCAT+TGG | 0.391339 | 2_3:+4946286 | Msa0273420:CDS |
| CAATTGATCCATACTGCATC+TGG | 0.392111 | 2_3:-4947235 | None:intergenic |
| GAAGCAATTGCAACTGCTAC+TGG | 0.392822 | 2_3:+4947808 | Msa0273420:CDS |
| CCTTAATTATACAGCCCAAT+CGG | 0.396259 | 2_3:+4946443 | Msa0273420:CDS |
| AATAGAACATTAACTCTAAG+AGG | 0.396585 | 2_3:-4946622 | None:intergenic |
| CGATGGGCGGCCACCTTGCA+CGG | 0.405963 | 2_3:+4944631 | Msa0273420:CDS |
| AGCATAGGTTGTAATCTTCC+TGG | 0.407316 | 2_3:+4945612 | Msa0273420:CDS |
| GGACCTAATTCTAATGACTA+TGG | 0.411083 | 2_3:+4944918 | Msa0273420:CDS |
| CAGATGCAGTATGGATCAAT+TGG | 0.413027 | 2_3:+4947236 | Msa0273420:CDS |
| TGAGCTCCGGCTCAGCGATC+AGG | 0.413257 | 2_3:-4944725 | None:intergenic |
| TATGAATTCCAGATGCAGTA+TGG | 0.413567 | 2_3:+4947227 | Msa0273420:CDS |
| TTAATATGGTTAAGTTTGGT+TGG | 0.413924 | 2_3:-4944415 | None:intergenic |
| TATATGCAGGGTAAGCAATC+AGG | 0.434839 | 2_3:+4946087 | Msa0273420:intron |
| TCGTGGGCGGGCCAAAACTT+AGG | 0.435343 | 2_3:+4946173 | Msa0273420:CDS |
| TTTGGCCCGCCCACGATCAC+TGG | 0.439101 | 2_3:-4946166 | None:intergenic |
| TTATAGTGGAGGACATGTAT+AGG | 0.440452 | 2_3:+4948035 | Msa0273420:three_prime_UTR |
| CAGCAAAGAGTTGCTAGAAT+GGG | 0.446474 | 2_3:+4947885 | Msa0273420:CDS |
| AAAGGCACAGAAGGCTTTCA+TGG | 0.450180 | 2_3:+4946201 | Msa0273420:CDS |
| AGCTTACAGTGAAAACTTGC+CGG | 0.452863 | 2_3:+4944878 | Msa0273420:CDS |
| AAAGTTGGATGAGGAATTCC+AGG | 0.455082 | 2_3:-4945630 | None:intergenic |
| TTCAATGACTATAGTTCGGT+TGG | 0.457129 | 2_3:+4946391 | Msa0273420:CDS |
| TGCTGTAACGAGCTGAATGC+TGG | 0.458389 | 2_3:+4944759 | Msa0273420:CDS |
| CGAACTATAGTCATTGAAGA+TGG | 0.460060 | 2_3:-4946386 | None:intergenic |
| TATAACCTCCATTGTTAATG+AGG | 0.464139 | 2_3:-4947521 | None:intergenic |
| CCAGCAAAGAGTTGCTAGAA+TGG | 0.466543 | 2_3:+4947884 | Msa0273420:CDS |
| ATACAATGTGATCAAGAATT+GGG | 0.467312 | 2_3:+4947572 | Msa0273420:CDS |
| ATGACTTACCCGCAATTCTC+AGG | 0.469236 | 2_3:-4947103 | None:intergenic |
| GATGGAGCACAACTGGGAGG+AGG | 0.469465 | 2_3:-4944579 | None:intergenic |
| TTGCCAATGGTGACCCGATT+GGG | 0.471157 | 2_3:-4946457 | None:intergenic |
| GCTGTAATGCCCTCCGGTAA+AGG | 0.472150 | 2_3:+4946253 | Msa0273420:CDS |
| AGTTGCTAGAATGGGGATCC+CGG | 0.472564 | 2_3:+4947893 | Msa0273420:CDS |
| CATCTTCAATGACTATAGTT+CGG | 0.473413 | 2_3:+4946387 | Msa0273420:CDS |
| TAATAAGAATTACATACAAC+AGG | 0.473583 | 2_3:-4948180 | None:intergenic |
| GCCGCCCATCGTTCCATCAC+AGG | 0.477265 | 2_3:-4944619 | None:intergenic |
| AAGTGAAGAGGTTTATGAAA+GGG | 0.477752 | 2_3:-4944440 | None:intergenic |
| TTGCCGGTGATTTGTATTGT+TGG | 0.479771 | 2_3:+4944894 | Msa0273420:CDS |
| TAGCTGAAACCGGAGATTCA+TGG | 0.480081 | 2_3:+4947056 | Msa0273420:CDS |
| CGTGGGCGGGCCAAAACTTA+GGG | 0.484670 | 2_3:+4946174 | Msa0273420:CDS |
| GCACGGCGCCTCGTCGAGAT+CGG | 0.485692 | 2_3:+4944648 | Msa0273420:CDS |
| ATACTCATTGTTGATAAAGA+AGG | 0.491540 | 2_3:+4946414 | Msa0273420:CDS |
| CGCCGGGCATTCCTTTGAAG+CGG | 0.492468 | 2_3:+4946587 | Msa0273420:CDS |
| GCCGGGCATTCCTTTGAAGC+GGG | 0.494061 | 2_3:+4946588 | Msa0273420:CDS |
| ACACAAACTATCAAACTCAA+TGG | 0.495489 | 2_3:+4944539 | Msa0273420:exon |
| TGGTCAGTAGGTGCTACTCT+TGG | 0.498559 | 2_3:+4947260 | Msa0273420:CDS |
| ATAATGGAGAGGGGAAATGC+TGG | 0.498584 | 2_3:+4947622 | Msa0273420:CDS |
| GTCCGTCCCTTCACCTGTGA+TGG | 0.499685 | 2_3:+4944606 | Msa0273420:CDS |
| TACATACAACAGGATATCAT+TGG | 0.501330 | 2_3:-4948170 | None:intergenic |
| GGATCAATTGGTTGGTCAGT+AGG | 0.502445 | 2_3:+4947248 | Msa0273420:CDS |
| TCATCCTTCTCCCGCTTCAA+AGG | 0.503104 | 2_3:-4946598 | None:intergenic |
| ACTGCTGTAATAGCTGAAAC+CGG | 0.503719 | 2_3:+4947046 | Msa0273420:CDS |
| CTGTCAGTACTAGCTACTGT+GGG | 0.503887 | 2_3:+4946323 | Msa0273420:CDS |
| AACACACGCGCCAACTCCCT+TGG | 0.506506 | 2_3:-4944808 | None:intergenic |
| CTTAATTATACAGCCCAATC+GGG | 0.507111 | 2_3:+4946444 | Msa0273420:CDS |
| TCAGGCAGTGGTGAATAACT+TGG | 0.509647 | 2_3:+4945521 | Msa0273420:intron |
| GTGAAGGGACGGACGGCGGA+TGG | 0.511628 | 2_3:-4944597 | None:intergenic |
| TACGCACGTGCCAAGGGAGT+TGG | 0.512127 | 2_3:+4944798 | Msa0273420:CDS |
| GGCTGTTAGCAGCAGCAACC+CGG | 0.512218 | 2_3:-4947912 | None:intergenic |
| AAGAGTTAAATTGAAGTCAC+CGG | 0.515268 | 2_3:-4944694 | None:intergenic |
| ACATTTCATTGGAACATACT+GGG | 0.516280 | 2_3:+4946297 | Msa0273420:CDS |
| TGACCACCTGATCGCTGAGC+CGG | 0.516519 | 2_3:+4944719 | Msa0273420:CDS |
| CCGGTGATTTGTATTGTTGG+AGG | 0.519985 | 2_3:+4944897 | Msa0273420:CDS |
| TCTCGACGAGGCGCCGTGCA+AGG | 0.521803 | 2_3:-4944644 | None:intergenic |
| TGACGGTTACGCACGTGCCA+AGG | 0.521812 | 2_3:+4944791 | Msa0273420:CDS |
| ACAGTTAAACCATGAATCTC+CGG | 0.523001 | 2_3:-4947065 | None:intergenic |
| ATTGCCAATGGTGACCCGAT+TGG | 0.524019 | 2_3:-4946458 | None:intergenic |
| TGAAGCCAGTGATCGTGGGC+GGG | 0.526274 | 2_3:+4946161 | Msa0273420:CDS |
| ACCCGCAATTCTCAGGCAAA+CGG | 0.528878 | 2_3:-4947096 | None:intergenic |
| CATTCCTTTGAAGCGGGAGA+AGG | 0.531683 | 2_3:+4946594 | Msa0273420:CDS |
| ACAGGGTCCCTAGCAAAAGT+TGG | 0.532482 | 2_3:-4945645 | None:intergenic |
| AGCTGTGAAGCCAGTGATCG+TGG | 0.532532 | 2_3:+4946156 | Msa0273420:CDS |
| ATTGAAGTTGAGATTCATGA+TGG | 0.533621 | 2_3:+4947546 | Msa0273420:CDS |
| ATGGAGTTTGCAGAAGCTAG+TGG | 0.535258 | 2_3:+4946220 | Msa0273420:CDS |
| CCGTAGAATCTATGTTCCGC+CGG | 0.536077 | 2_3:+4946570 | Msa0273420:CDS |
| CAGCCCAATCGGGTCACCAT+TGG | 0.536193 | 2_3:+4946454 | Msa0273420:CDS |
| CTCCGTTTGCCTGAGAATTG+CGG | 0.539254 | 2_3:+4947094 | Msa0273420:CDS |
| TCTATTGGGGATTAGGAGGA+CGG | 0.540406 | 2_3:-4947933 | None:intergenic |
| AAGCCTGTTTATATAAGCAT+AGG | 0.541294 | 2_3:+4945597 | Msa0273420:CDS |
| ATGGAGCACAACTGGGAGGA+GGG | 0.542344 | 2_3:-4944578 | None:intergenic |
| TCCCGCTTCAAAGGAATGCC+CGG | 0.545573 | 2_3:-4946589 | None:intergenic |
| TGCTACTCTTGGATATGCAC+AGG | 0.546594 | 2_3:+4947271 | Msa0273420:CDS |
| CATCGTTCCATCACAGGTGA+AGG | 0.549457 | 2_3:-4944613 | None:intergenic |
| GACGGTTACGCACGTGCCAA+GGG | 0.554158 | 2_3:+4944792 | Msa0273420:CDS |
| GCCAAAACTTAGGGTAGCAA+AGG | 0.554357 | 2_3:+4946183 | Msa0273420:CDS |
| TTTGTGAGTGCCATCCATAA+TGG | 0.556042 | 2_3:+4947606 | Msa0273420:CDS |
| GTGAAGCCAGTGATCGTGGG+CGG | 0.556799 | 2_3:+4946160 | Msa0273420:CDS |
| ATGGATGGCACTCACAAAGC+GGG | 0.559447 | 2_3:-4947601 | None:intergenic |
| TTCACCTGTGATGGAACGAT+GGG | 0.561828 | 2_3:+4944615 | Msa0273420:CDS |
| TGCAGTATGGATCAATTGGT+TGG | 0.563971 | 2_3:+4947240 | Msa0273420:CDS |
| GCTGTTAGCAGCAGCAACCC+GGG | 0.564051 | 2_3:-4947911 | None:intergenic |
| ACGGCGGATGGAGCACAACT+GGG | 0.566889 | 2_3:-4944585 | None:intergenic |
| ACCTGTGATGGAACGATGGG+CGG | 0.568178 | 2_3:+4944618 | Msa0273420:CDS |
| TTCACTGTAAGCTCCGGCAA+TGG | 0.568212 | 2_3:-4944868 | None:intergenic |
| CTTCACCTGTGATGGAACGA+TGG | 0.568221 | 2_3:+4944614 | Msa0273420:CDS |
| CCTTATTTAGGTGACGGCAC+AGG | 0.570395 | 2_3:+4947455 | Msa0273420:intron |
| AATCGGGTCACCATTGGCAA+TGG | 0.570764 | 2_3:+4946460 | Msa0273420:CDS |
| TGCAACACTTGAGGACAAGA+TGG | 0.571581 | 2_3:-4948115 | None:intergenic |
| GGGGAAATGCTGGACTGCTA+AGG | 0.572838 | 2_3:+4947632 | Msa0273420:CDS |
| TAGGGTAGCAAAGGCACAGA+AGG | 0.572977 | 2_3:+4946192 | Msa0273420:CDS |
| TTTCCCCTCTCCATTATGGA+TGG | 0.575380 | 2_3:-4947616 | None:intergenic |
| ATCTTCCTCATTAACAATGG+AGG | 0.578555 | 2_3:+4947516 | Msa0273420:CDS |
| CGTAGAATCTATGTTCCGCC+GGG | 0.578586 | 2_3:+4946571 | Msa0273420:CDS |
| GTTGCTAGAATGGGGATCCC+GGG | 0.579978 | 2_3:+4947894 | Msa0273420:CDS |
| GGCAGTGGTGAATAACTTGG+AGG | 0.581002 | 2_3:+4945524 | Msa0273420:intron |
| AGCCATGAAAACCCAACCTA+AGG | 0.581125 | 2_3:-4946488 | None:intergenic |
| CCGGCGGAACATAGATTCTA+CGG | 0.582973 | 2_3:-4946570 | None:intergenic |
| CCAATAGCTGTAATGCCCTC+CGG | 0.583459 | 2_3:+4946247 | Msa0273420:CDS |
| GAAGTGAAGAGGTTTATGAA+AGG | 0.583637 | 2_3:-4944441 | None:intergenic |
| GTGATTGCATGCATTGGTGA+TGG | 0.584370 | 2_3:+4947311 | Msa0273420:CDS |
| TCCCTAGCAAAAGTTGGATG+AGG | 0.588011 | 2_3:-4945639 | None:intergenic |
| ACAACAAAGTGCAACACTTG+AGG | 0.589324 | 2_3:-4948124 | None:intergenic |
| GAACTATAGTCATTGAAGAT+GGG | 0.590504 | 2_3:-4946385 | None:intergenic |
| GAGCCGGAGCTCAACCTCGT+CGG | 0.599794 | 2_3:+4944735 | Msa0273420:CDS |
| CGACGAGGCGCCGTGCAAGG+TGG | 0.601198 | 2_3:-4944641 | None:intergenic |
| CAACCGACGAGGTTGAGCTC+CGG | 0.602678 | 2_3:-4944738 | None:intergenic |
| TTCCATCACAGGTGAAGGGA+CGG | 0.603435 | 2_3:-4944608 | None:intergenic |
| GCTCCGGCTCAGCGATCAGG+TGG | 0.604206 | 2_3:-4944722 | None:intergenic |
| TTTGTGTGTGTGAAGTGAAG+AGG | 0.610841 | 2_3:-4944452 | None:intergenic |
| AGAAGCAGCTGTCGAAGAAG+CGG | 0.612852 | 2_3:+4946117 | Msa0273420:CDS |
| ATTTCAACAATGATCCGTTG+TGG | 0.614449 | 2_3:+4947480 | Msa0273420:CDS |
| ACGGTAATTCTCCACAGCTG+TGG | 0.615891 | 2_3:-4946551 | None:intergenic |
| AGAGTTAAATTGAAGTCACC+GGG | 0.615952 | 2_3:-4944693 | None:intergenic |
| GTTGAACAGGAACTGCTAAG+TGG | 0.616520 | 2_3:+4947019 | Msa0273420:intron |
| TGCAGGGTAAGCAATCAGGA+AGG | 0.617642 | 2_3:+4946091 | Msa0273420:intron |
| ATCATCTTCCTCATTAACAA+TGG | 0.620276 | 2_3:+4947513 | Msa0273420:CDS |
| GCTGTCAGTACTAGCTACTG+TGG | 0.622291 | 2_3:+4946322 | Msa0273420:CDS |
| CCTCCAACAATACAAATCAC+CGG | 0.622440 | 2_3:-4944897 | None:intergenic |
| ATCGTTCCATCACAGGTGAA+GGG | 0.622898 | 2_3:-4944612 | None:intergenic |
| TGGTACAAGTCCTTTACCGG+AGG | 0.626304 | 2_3:-4946263 | None:intergenic |
| AGTGCCATCCATAATGGAGA+GGG | 0.626807 | 2_3:+4947612 | Msa0273420:CDS |
| GCTGTGAAGCCAGTGATCGT+GGG | 0.629235 | 2_3:+4946157 | Msa0273420:CDS |
| GGTACAAGTCCTTTACCGGA+GGG | 0.630851 | 2_3:-4946262 | None:intergenic |
| AAGCGTGTGATTGCATGCAT+TGG | 0.633443 | 2_3:+4947305 | Msa0273420:CDS |
| CAGTATGTTCCAATGAAATG+TGG | 0.633740 | 2_3:-4946295 | None:intergenic |
| ATCACAGGTGAAGGGACGGA+CGG | 0.639749 | 2_3:-4944604 | None:intergenic |
| TAAGGAAAGACCATTGCCAA+TGG | 0.647139 | 2_3:-4946470 | None:intergenic |
| CGCGAACGCCGATCTCGACG+AGG | 0.647172 | 2_3:-4944656 | None:intergenic |
| AGCAAAGAGTTGCTAGAATG+GGG | 0.647655 | 2_3:+4947886 | Msa0273420:CDS |
| ACAGGTGAAGGGACGGACGG+CGG | 0.660278 | 2_3:-4944601 | None:intergenic |
| GCAGGGTAAGCAATCAGGAA+GGG | 0.661004 | 2_3:+4946092 | Msa0273420:intron |
| AATGCTGGATATGCTGCTGA+CGG | 0.662126 | 2_3:+4944774 | Msa0273420:CDS |
| GCGGATGGAGCACAACTGGG+AGG | 0.668015 | 2_3:-4944582 | None:intergenic |
| CATTTCATTGGAACATACTG+GGG | 0.673408 | 2_3:+4946298 | Msa0273420:CDS |
| GAGTGCCATCCATAATGGAG+AGG | 0.675947 | 2_3:+4947611 | Msa0273420:CDS |
| TATGGATGGCACTCACAAAG+CGG | 0.696212 | 2_3:-4947602 | None:intergenic |
| CGCTTCAAAGGAATGCCCGG+CGG | 0.703133 | 2_3:-4946586 | None:intergenic |
| GTGAGTATAGGTACGTACAG+AGG | 0.709245 | 2_3:+4947774 | Msa0273420:intron |
| GTGCCATCCATAATGGAGAG+GGG | 0.709547 | 2_3:+4947613 | Msa0273420:CDS |
| GCTCGTTACAGCAACCGACG+AGG | 0.724744 | 2_3:-4944749 | None:intergenic |
| TGTCAGTACTAGCTACTGTG+GGG | 0.752691 | 2_3:+4946324 | Msa0273420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATCATTAATTAAAG+TGG | - | chr2_3:4945980-4945999 | None:intergenic | 10.0% |
| !! | AAATAAATTAATTAATGAAC+AGG | - | chr2_3:4947417-4947436 | None:intergenic | 10.0% |
| !! | TTAATGATTATTTATCCATA+TGG | + | chr2_3:4945986-4946005 | Msa0273420:intron | 15.0% |
| !! | ACAGTAATATAGTAATTTAA+TGG | - | chr2_3:4946968-4946987 | None:intergenic | 15.0% |
| !!! | TTAATTAATTTATTTTCGGA+TGG | + | chr2_3:4947422-4947441 | Msa0273420:intron | 15.0% |
| !!! | TTTATGAAAGGGTTTTAATA+TGG | - | chr2_3:4944432-4944451 | None:intergenic | 20.0% |
| !!! | TTTTCTCTTATATATAGGAT+TGG | - | chr2_3:4945064-4945083 | None:intergenic | 20.0% |
| !!! | CTCAATTTTCTCTTATATAT+AGG | - | chr2_3:4945069-4945088 | None:intergenic | 20.0% |
| !!! | ATTTGGTTCAAAAATTCAAA+TGG | + | chr2_3:4945125-4945144 | Msa0273420:intron | 20.0% |
| !! | AAAATTCAAATGGATGTATA+TGG | + | chr2_3:4945135-4945154 | Msa0273420:intron | 20.0% |
| !! | AAATAATAAACGAACTTAGA+AGG | - | chr2_3:4945824-4945843 | None:intergenic | 20.0% |
| !!! | ACATTTTTACAATTATATGC+AGG | + | chr2_3:4946074-4946093 | Msa0273420:intron | 20.0% |
| !!! | CATTTTTACAATTATATGCA+GGG | + | chr2_3:4946075-4946094 | Msa0273420:intron | 20.0% |
| !! | TAACAGGATAAATCTAAAAA+AGG | - | chr2_3:4946771-4946790 | None:intergenic | 20.0% |
| !!! | TTAGGAATTGATTTTCTATT+GGG | - | chr2_3:4947950-4947969 | None:intergenic | 20.0% |
| !!! | ATTAGGAATTGATTTTCTAT+TGG | - | chr2_3:4947951-4947970 | None:intergenic | 20.0% |
| !! | TAATAAGAATTACATACAAC+AGG | - | chr2_3:4948183-4948202 | None:intergenic | 20.0% |
| !!! | GGTTTTAATATGGTTAAGTT+TGG | - | chr2_3:4944422-4944441 | None:intergenic | 25.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | + | chr2_3:4944948-4944967 | Msa0273420:CDS | 25.0% |
| !!! | TCAACAAAAGTTGATGTATT+TGG | + | chr2_3:4945089-4945108 | Msa0273420:intron | 25.0% |
| !!! | TTGGTTTAAGTTGAAGTATT+TGG | + | chr2_3:4945108-4945127 | Msa0273420:intron | 25.0% |
| ! | AGATTCTCAATGATCAAAAT+AGG | - | chr2_3:4945478-4945497 | None:intergenic | 25.0% |
| ! | AGTCATACATTCTTTCTAAA+AGG | - | chr2_3:4945750-4945769 | None:intergenic | 25.0% |
| ! | TAGAAAGAATGTATGACTAA+TGG | + | chr2_3:4945752-4945771 | Msa0273420:intron | 25.0% |
| ! | CATTTAACATATGTCTTCAA+GGG | - | chr2_3:4945947-4945966 | None:intergenic | 25.0% |
| ! | ATTTATCCATATGGTATTCA+TGG | + | chr2_3:4945995-4946014 | Msa0273420:intron | 25.0% |
| ! | TTTGTTCATGCATTCATATT+TGG | + | chr2_3:4946024-4946043 | Msa0273420:intron | 25.0% |
| !! | ATACTCATTGTTGATAAAGA+AGG | + | chr2_3:4946414-4946433 | Msa0273420:CDS | 25.0% |
| ! | AATAGAACATTAACTCTAAG+AGG | - | chr2_3:4946625-4946644 | None:intergenic | 25.0% |
| !!! | AATATGCAATATTGTTTCTG+TGG | + | chr2_3:4946939-4946958 | Msa0273420:intron | 25.0% |
| ! | TATTTAATTGCTGAACTGAA+TGG | - | chr2_3:4946998-4947017 | None:intergenic | 25.0% |
| ! | AGCAATTAAATATGTTGAAC+AGG | + | chr2_3:4947006-4947025 | Msa0273420:intron | 25.0% |
| ! | ATACAATGTGATCAAGAATT+GGG | + | chr2_3:4947572-4947591 | Msa0273420:CDS | 25.0% |
| ! | CAAATTCTAAACTAAAACAG+TGG | - | chr2_3:4947687-4947706 | None:intergenic | 25.0% |
| !!! | CACTGTTTTAGTTTAGAATT+TGG | + | chr2_3:4947685-4947704 | Msa0273420:intron | 25.0% |
| !! | TTAGTTTAGAATTTGGTTGA+AGG | + | chr2_3:4947692-4947711 | Msa0273420:intron | 25.0% |
| !!! | AAATTCACTTTTGTGAGTAT+AGG | + | chr2_3:4947762-4947781 | Msa0273420:intron | 25.0% |
| !!! | TAGGAATTGATTTTCTATTG+GGG | - | chr2_3:4947949-4947968 | None:intergenic | 25.0% |
| ! | ATATGCATAATGCAGTAATT+AGG | - | chr2_3:4947968-4947987 | None:intergenic | 25.0% |
| !!! | TAATTTGGTGCATTTTATAG+TGG | + | chr2_3:4948021-4948040 | Msa0273420:three_prime_UTR | 25.0% |
| ! | TAGGATAAATGTGACAAAAA+TGG | + | chr2_3:4948054-4948073 | Msa0273420:three_prime_UTR | 25.0% |
| AAGTGAAGAGGTTTATGAAA+GGG | - | chr2_3:4944443-4944462 | None:intergenic | 30.0% | |
| ACACAAACTATCAAACTCAA+TGG | + | chr2_3:4944539-4944558 | Msa0273420:exon | 30.0% | |
| AAGAGTTAAATTGAAGTCAC+CGG | - | chr2_3:4944697-4944716 | None:intergenic | 30.0% | |
| GTACCATAGTCATTAGAATT+AGG | - | chr2_3:4944924-4944943 | None:intergenic | 30.0% | |
| !! | TATTGACTCAAATTTCTCAC+CGG | + | chr2_3:4945182-4945201 | Msa0273420:intron | 30.0% |
| TTCTCAAATTATTACTCCTC+CGG | - | chr2_3:4945204-4945223 | None:intergenic | 30.0% | |
| TTGAGAATCTGATGATATTG+TGG | + | chr2_3:4945488-4945507 | Msa0273420:intron | 30.0% | |
| ! | TATTGTGGTGTGAATTTTTC+AGG | + | chr2_3:4945503-4945522 | Msa0273420:intron | 30.0% |
| AAGCCTGTTTATATAAGCAT+AGG | + | chr2_3:4945597-4945616 | Msa0273420:CDS | 30.0% | |
| CAACCTATGCTTATATAAAC+AGG | - | chr2_3:4945603-4945622 | None:intergenic | 30.0% | |
| AATTATAGCATTCGTTCATG+AGG | + | chr2_3:4945865-4945884 | Msa0273420:intron | 30.0% | |
| CCATTTAACATATGTCTTCA+AGG | - | chr2_3:4945948-4945967 | None:intergenic | 30.0% | |
| CCTTGAAGACATATGTTAAA+TGG | + | chr2_3:4945945-4945964 | Msa0273420:intron | 30.0% | |
| !! | ATTAATTAAAGTGGCTCTAG+TGG | - | chr2_3:4945971-4945990 | None:intergenic | 30.0% |
| ! | ATGAAATGTGGATGATTTTC+TGG | - | chr2_3:4946286-4946305 | None:intergenic | 30.0% |
| GAAAATCATCCACATTTCAT+TGG | + | chr2_3:4946286-4946305 | Msa0273420:CDS | 30.0% | |
| ACATTTCATTGGAACATACT+GGG | + | chr2_3:4946297-4946316 | Msa0273420:CDS | 30.0% | |
| GAACTATAGTCATTGAAGAT+GGG | - | chr2_3:4946388-4946407 | None:intergenic | 30.0% | |
| CATCTTCAATGACTATAGTT+CGG | + | chr2_3:4946387-4946406 | Msa0273420:CDS | 30.0% | |
| CTTAACTGCATTGTCTAAAA+AGG | + | chr2_3:4946516-4946535 | Msa0273420:CDS | 30.0% | |
| AATTCAGTCTAGTGATTCTT+TGG | + | chr2_3:4946690-4946709 | Msa0273420:intron | 30.0% | |
| GCATTAGCTATTTACTACAA+TGG | - | chr2_3:4946742-4946761 | None:intergenic | 30.0% | |
| !! | ATGTATGTGTTGATTATGAG+TGG | + | chr2_3:4946834-4946853 | Msa0273420:intron | 30.0% |
| TGGAATTCATAACTGAAAGA+TGG | - | chr2_3:4947218-4947237 | None:intergenic | 30.0% | |
| ATCATCTTCCTCATTAACAA+TGG | + | chr2_3:4947513-4947532 | Msa0273420:CDS | 30.0% | |
| TATAACCTCCATTGTTAATG+AGG | - | chr2_3:4947524-4947543 | None:intergenic | 30.0% | |
| ATTGAAGTTGAGATTCATGA+TGG | + | chr2_3:4947546-4947565 | Msa0273420:CDS | 30.0% | |
| CAATTCTTGATCACATTGTA+TGG | - | chr2_3:4947573-4947592 | None:intergenic | 30.0% | |
| CATACAATGTGATCAAGAAT+TGG | + | chr2_3:4947571-4947590 | Msa0273420:CDS | 30.0% | |
| ! | TTGATTTTCTATTGGGGATT+AGG | - | chr2_3:4947943-4947962 | None:intergenic | 30.0% |
| TACATACAACAGGATATCAT+TGG | - | chr2_3:4948173-4948192 | None:intergenic | 30.0% | |
| GAAGTGAAGAGGTTTATGAA+AGG | - | chr2_3:4944444-4944463 | None:intergenic | 35.0% | |
| AGAGTTAAATTGAAGTCACC+GGG | - | chr2_3:4944696-4944715 | None:intergenic | 35.0% | |
| ! | TGTGTTGTGACTTTTACAGT+CGG | + | chr2_3:4944825-4944844 | Msa0273420:CDS | 35.0% |
| GGACCTAATTCTAATGACTA+TGG | + | chr2_3:4944918-4944937 | Msa0273420:CDS | 35.0% | |
| ! | TCAAACGATCACATGTTTTC+AGG | + | chr2_3:4945004-4945023 | Msa0273420:CDS | 35.0% |
| TTTGAGAACATATGTCAGAC+CGG | + | chr2_3:4945216-4945235 | Msa0273420:intron | 35.0% | |
| GTGCAAGAAAAAATGGAACA+GGG | - | chr2_3:4945665-4945684 | None:intergenic | 35.0% | |
| !!! | TTCCATTTTTTCTTGCACCA+AGG | + | chr2_3:4945667-4945686 | Msa0273420:CDS | 35.0% |
| ! | TACCTTGGTGCAAGAAAAAA+TGG | - | chr2_3:4945672-4945691 | None:intergenic | 35.0% |
| GGTAAGCAAAATACATACCT+TGG | - | chr2_3:4945687-4945706 | None:intergenic | 35.0% | |
| CAGATAACAGAAACTTCACA+AGG | - | chr2_3:4945708-4945727 | None:intergenic | 35.0% | |
| ! | GTATGACTAATGGTAGTGAT+AGG | + | chr2_3:4945762-4945781 | Msa0273420:intron | 35.0% |
| CATGATCCATGAATACCATA+TGG | - | chr2_3:4946004-4946023 | None:intergenic | 35.0% | |
| CAGTATGTTCCAATGAAATG+TGG | - | chr2_3:4946298-4946317 | None:intergenic | 35.0% | |
| CACATTTCATTGGAACATAC+TGG | + | chr2_3:4946296-4946315 | Msa0273420:CDS | 35.0% | |
| CATTTCATTGGAACATACTG+GGG | + | chr2_3:4946298-4946317 | Msa0273420:CDS | 35.0% | |
| !! | GCTGATGCTTATGTTTTTGT+TGG | + | chr2_3:4946361-4946380 | Msa0273420:CDS | 35.0% |
| CGAACTATAGTCATTGAAGA+TGG | - | chr2_3:4946389-4946408 | None:intergenic | 35.0% | |
| TTCAATGACTATAGTTCGGT+TGG | + | chr2_3:4946391-4946410 | Msa0273420:CDS | 35.0% | |
| CCTTAATTATACAGCCCAAT+CGG | + | chr2_3:4946443-4946462 | Msa0273420:CDS | 35.0% | |
| CTTAATTATACAGCCCAATC+GGG | + | chr2_3:4946444-4946463 | Msa0273420:CDS | 35.0% | |
| TGTTCTATTCAAGCACATTC+AGG | + | chr2_3:4946636-4946655 | Msa0273420:CDS | 35.0% | |
| TCCTGTTAAATCATGTGACA+CGG | + | chr2_3:4946783-4946802 | Msa0273420:intron | 35.0% | |
| !! | GTTGATTATGAGTGGATTAG+AGG | + | chr2_3:4946842-4946861 | Msa0273420:intron | 35.0% |
| TAAAACATTGCCCAAAAACG+AGG | + | chr2_3:4946867-4946886 | Msa0273420:intron | 35.0% | |
| AACACTCAACAGCTAATCAT+CGG | - | chr2_3:4946906-4946925 | None:intergenic | 35.0% | |
| ACAGTTAAACCATGAATCTC+CGG | - | chr2_3:4947068-4947087 | None:intergenic | 35.0% | |
| TCAGACAATGTAGATTGTAG+AGG | - | chr2_3:4947172-4947191 | None:intergenic | 35.0% | |
| TATGAATTCCAGATGCAGTA+TGG | + | chr2_3:4947227-4947246 | Msa0273420:CDS | 35.0% | |
| !! | GGATGTATGATGCCTTATTT+AGG | + | chr2_3:4947443-4947462 | Msa0273420:intron | 35.0% |
| !! | ATGATGCCTTATTTAGGTGA+CGG | + | chr2_3:4947449-4947468 | Msa0273420:intron | 35.0% |
| ATTTCAACAATGATCCGTTG+TGG | + | chr2_3:4947480-4947499 | Msa0273420:CDS | 35.0% | |
| !!! | TGATGCTATTTTGTCCACAA+CGG | - | chr2_3:4947497-4947516 | None:intergenic | 35.0% |
| ATCTTCCTCATTAACAATGG+AGG | + | chr2_3:4947516-4947535 | Msa0273420:CDS | 35.0% | |
| ! | TATAGAAGTTTTTGCGCACA+AGG | + | chr2_3:4947855-4947874 | Msa0273420:CDS | 35.0% |
| ! | ATTTTCTATTGGGGATTAGG+AGG | - | chr2_3:4947940-4947959 | None:intergenic | 35.0% |
| !! | TTTGGTGCATTTTATAGTGG+AGG | + | chr2_3:4948024-4948043 | Msa0273420:three_prime_UTR | 35.0% |
| ! | TTATAGTGGAGGACATGTAT+AGG | + | chr2_3:4948035-4948054 | Msa0273420:three_prime_UTR | 35.0% |
| TTTGTGTGTGTGAAGTGAAG+AGG | - | chr2_3:4944455-4944474 | None:intergenic | 40.0% | |
| ! | CAAGTTTTCACTGTAAGCTC+CGG | - | chr2_3:4944877-4944896 | None:intergenic | 40.0% |
| AGCTTACAGTGAAAACTTGC+CGG | + | chr2_3:4944878-4944897 | Msa0273420:CDS | 40.0% | |
| ! | TTGCCGGTGATTTGTATTGT+TGG | + | chr2_3:4944894-4944913 | Msa0273420:CDS | 40.0% |
| CCTCCAACAATACAAATCAC+CGG | - | chr2_3:4944900-4944919 | None:intergenic | 40.0% | |
| !! | CAATGGTATGGTGCCATTAA+TGG | - | chr2_3:4945256-4945275 | None:intergenic | 40.0% |
| ATACTTCAGTGCCATAGCAA+TGG | - | chr2_3:4945358-4945377 | None:intergenic | 40.0% | |
| AGCATAGGTTGTAATCTTCC+TGG | + | chr2_3:4945612-4945631 | Msa0273420:CDS | 40.0% | |
| AAAGTTGGATGAGGAATTCC+AGG | - | chr2_3:4945633-4945652 | None:intergenic | 40.0% | |
| ! | TTCCTCATCCAACTTTTGCT+AGG | + | chr2_3:4945637-4945656 | Msa0273420:CDS | 40.0% |
| ! | TCCTCATCCAACTTTTGCTA+GGG | + | chr2_3:4945638-4945657 | Msa0273420:CDS | 40.0% |
| GGTGCAAGAAAAAATGGAAC+AGG | - | chr2_3:4945666-4945685 | None:intergenic | 40.0% | |
| TCGTTCATGAGGTGTAAGTT+CGG | + | chr2_3:4945876-4945895 | Msa0273420:intron | 40.0% | |
| AGTTTGACCTTGGAACTTCA+AGG | + | chr2_3:4945906-4945925 | Msa0273420:intron | 40.0% | |
| GTTTGACCTTGGAACTTCAA+GGG | + | chr2_3:4945907-4945926 | Msa0273420:intron | 40.0% | |
| TATATGCAGGGTAAGCAATC+AGG | + | chr2_3:4946087-4946106 | Msa0273420:intron | 40.0% | |
| TTCTGGTACAAGTCCTTTAC+CGG | - | chr2_3:4946269-4946288 | None:intergenic | 40.0% | |
| CCGATTGGGCTGTATAATTA+AGG | - | chr2_3:4946446-4946465 | None:intergenic | 40.0% | |
| TAAGGAAAGACCATTGCCAA+TGG | - | chr2_3:4946473-4946492 | None:intergenic | 40.0% | |
| ATTGGCAATGGTCTTTCCTT+AGG | + | chr2_3:4946472-4946491 | Msa0273420:CDS | 40.0% | |
| CAATGGTCTTTCCTTAGGTT+GGG | + | chr2_3:4946477-4946496 | Msa0273420:CDS | 40.0% | |
| !!! | TTCCTTAGGTTGGGTTTTCA+TGG | + | chr2_3:4946486-4946505 | Msa0273420:CDS | 40.0% |
| ACCGTGTCACATGATTTAAC+AGG | - | chr2_3:4946787-4946806 | None:intergenic | 40.0% | |
| !! | CCGTTATGTTCCTCGTTTTT+GGG | - | chr2_3:4946880-4946899 | None:intergenic | 40.0% |
| CCCAAAAACGAGGAACATAA+CGG | + | chr2_3:4946877-4946896 | Msa0273420:intron | 40.0% | |
| ! | ACCGTTATGTTCCTCGTTTT+TGG | - | chr2_3:4946881-4946900 | None:intergenic | 40.0% |
| ACTGCTGTAATAGCTGAAAC+CGG | + | chr2_3:4947046-4947065 | Msa0273420:CDS | 40.0% | |
| CAATTGATCCATACTGCATC+TGG | - | chr2_3:4947238-4947257 | None:intergenic | 40.0% | |
| CAGATGCAGTATGGATCAAT+TGG | + | chr2_3:4947236-4947255 | Msa0273420:CDS | 40.0% | |
| TGCAGTATGGATCAATTGGT+TGG | + | chr2_3:4947240-4947259 | Msa0273420:CDS | 40.0% | |
| TAATGAACAGGCTTACTTGC+TGG | - | chr2_3:4947405-4947424 | None:intergenic | 40.0% | |
| TTTGTGAGTGCCATCCATAA+TGG | + | chr2_3:4947606-4947625 | Msa0273420:CDS | 40.0% | |
| CAGCAAAGAGTTGCTAGAAT+GGG | + | chr2_3:4947885-4947904 | Msa0273420:CDS | 40.0% | |
| AGCAAAGAGTTGCTAGAATG+GGG | + | chr2_3:4947886-4947905 | Msa0273420:CDS | 40.0% | |
| ACAACAAAGTGCAACACTTG+AGG | - | chr2_3:4948127-4948146 | None:intergenic | 40.0% | |
| ATCGTTCCATCACAGGTGAA+GGG | - | chr2_3:4944615-4944634 | None:intergenic | 45.0% | |
| ! | TTCACCTGTGATGGAACGAT+GGG | + | chr2_3:4944615-4944634 | Msa0273420:CDS | 45.0% |
| AATGCTGGATATGCTGCTGA+CGG | + | chr2_3:4944774-4944793 | Msa0273420:CDS | 45.0% | |
| ! | GTTGTGACTTTTACAGTCGG+TGG | + | chr2_3:4944828-4944847 | Msa0273420:CDS | 45.0% |
| AGTATTCTCAACGCCATTGC+CGG | + | chr2_3:4944855-4944874 | Msa0273420:CDS | 45.0% | |
| ! | CCGGTGATTTGTATTGTTGG+AGG | + | chr2_3:4944897-4944916 | Msa0273420:CDS | 45.0% |
| CGAAGCTCTTGCGAAAAATC+AGG | - | chr2_3:4944978-4944997 | None:intergenic | 45.0% | |
| TGACTCAAATTTCTCACCGG+AGG | + | chr2_3:4945185-4945204 | Msa0273420:intron | 45.0% | |
| !! | CTCCACTTTGGTGCCATTAA+TGG | + | chr2_3:4945240-4945259 | Msa0273420:intron | 45.0% |
| TGCCATTAATGGCACCAAAG+TGG | - | chr2_3:4945245-4945264 | None:intergenic | 45.0% | |
| CACACATCCACACACATCAA+CGG | + | chr2_3:4945303-4945322 | Msa0273420:intron | 45.0% | |
| !!! | GGTGTGAATTTTTCAGGCAG+TGG | + | chr2_3:4945509-4945528 | Msa0273420:intron | 45.0% |
| TCAGGCAGTGGTGAATAACT+TGG | + | chr2_3:4945521-4945540 | Msa0273420:intron | 45.0% | |
| TCCCTAGCAAAAGTTGGATG+AGG | - | chr2_3:4945642-4945661 | None:intergenic | 45.0% | |
| TTCATGAGGTGTAAGTTCGG+TGG | + | chr2_3:4945879-4945898 | Msa0273420:intron | 45.0% | |
| CTTCATCCCTTGAAGTTCCA+AGG | - | chr2_3:4945916-4945935 | None:intergenic | 45.0% | |
| GCCAAAACTTAGGGTAGCAA+AGG | + | chr2_3:4946183-4946202 | Msa0273420:CDS | 45.0% | |
| ! | GCCTTTGCTACCCTAAGTTT+TGG | - | chr2_3:4946187-4946206 | None:intergenic | 45.0% |
| ! | AAAGGCACAGAAGGCTTTCA+TGG | + | chr2_3:4946201-4946220 | Msa0273420:CDS | 45.0% |
| ATGGAGTTTGCAGAAGCTAG+TGG | + | chr2_3:4946220-4946239 | Msa0273420:CDS | 45.0% | |
| CTGTCAGTACTAGCTACTGT+GGG | + | chr2_3:4946323-4946342 | Msa0273420:CDS | 45.0% | |
| TGTCAGTACTAGCTACTGTG+GGG | + | chr2_3:4946324-4946343 | Msa0273420:CDS | 45.0% | |
| GCAATGGTCTTTCCTTAGGT+TGG | + | chr2_3:4946476-4946495 | Msa0273420:CDS | 45.0% | |
| AGCCATGAAAACCCAACCTA+AGG | - | chr2_3:4946491-4946510 | None:intergenic | 45.0% | |
| GAAGAAAAACACCACAGCTG+TGG | + | chr2_3:4946540-4946559 | Msa0273420:CDS | 45.0% | |
| GTTGAACAGGAACTGCTAAG+TGG | + | chr2_3:4947019-4947038 | Msa0273420:intron | 45.0% | |
| TAGCTGAAACCGGAGATTCA+TGG | + | chr2_3:4947056-4947075 | Msa0273420:CDS | 45.0% | |
| ATGACTTACCCGCAATTCTC+AGG | - | chr2_3:4947106-4947125 | None:intergenic | 45.0% | |
| ! | GGATCAATTGGTTGGTCAGT+AGG | + | chr2_3:4947248-4947267 | Msa0273420:CDS | 45.0% |
| TGCTACTCTTGGATATGCAC+AGG | + | chr2_3:4947271-4947290 | Msa0273420:CDS | 45.0% | |
| AAGCGTGTGATTGCATGCAT+TGG | + | chr2_3:4947305-4947324 | Msa0273420:CDS | 45.0% | |
| ! | GTGATTGCATGCATTGGTGA+TGG | + | chr2_3:4947311-4947330 | Msa0273420:CDS | 45.0% |
| !!! | CATTGGTGATGGCAGTTTTC+AGG | + | chr2_3:4947322-4947341 | Msa0273420:CDS | 45.0% |
| TATGGATGGCACTCACAAAG+CGG | - | chr2_3:4947605-4947624 | None:intergenic | 45.0% | |
| ! | AGTGCCATCCATAATGGAGA+GGG | + | chr2_3:4947612-4947631 | Msa0273420:CDS | 45.0% |
| TTTCCCCTCTCCATTATGGA+TGG | - | chr2_3:4947619-4947638 | None:intergenic | 45.0% | |
| AGCATTTCCCCTCTCCATTA+TGG | - | chr2_3:4947623-4947642 | None:intergenic | 45.0% | |
| ! | ATAATGGAGAGGGGAAATGC+TGG | + | chr2_3:4947622-4947641 | Msa0273420:CDS | 45.0% |
| GTGAGTATAGGTACGTACAG+AGG | + | chr2_3:4947774-4947793 | Msa0273420:intron | 45.0% | |
| GAAGCAATTGCAACTGCTAC+TGG | + | chr2_3:4947808-4947827 | Msa0273420:CDS | 45.0% | |
| CCATTCTAGCAACTCTTTGC+TGG | - | chr2_3:4947887-4947906 | None:intergenic | 45.0% | |
| CCAGCAAAGAGTTGCTAGAA+TGG | + | chr2_3:4947884-4947903 | Msa0273420:CDS | 45.0% | |
| TCTATTGGGGATTAGGAGGA+CGG | - | chr2_3:4947936-4947955 | None:intergenic | 45.0% | |
| TGCAACACTTGAGGACAAGA+TGG | - | chr2_3:4948118-4948137 | None:intergenic | 45.0% | |
| !!! | TTCATTAATTAATTTATTTT+CGG | + | chr2_3:4947418-4947437 | Msa0273420:intron | 5.0% |
| !!! | TATAATTTGTATATTTAATT+TGG | + | chr2_3:4948006-4948025 | Msa0273420:three_prime_UTR | 5.0% |
| TTCCATCACAGGTGAAGGGA+CGG | - | chr2_3:4944611-4944630 | None:intergenic | 50.0% | |
| CATCGTTCCATCACAGGTGA+AGG | - | chr2_3:4944616-4944635 | None:intergenic | 50.0% | |
| ! | CTTCACCTGTGATGGAACGA+TGG | + | chr2_3:4944614-4944633 | Msa0273420:CDS | 50.0% |
| TGCTGTAACGAGCTGAATGC+TGG | + | chr2_3:4944759-4944778 | Msa0273420:CDS | 50.0% | |
| TTCACTGTAAGCTCCGGCAA+TGG | - | chr2_3:4944871-4944890 | None:intergenic | 50.0% | |
| AATGGCACCAAAGTGGAGTC+CGG | - | chr2_3:4945238-4945257 | None:intergenic | 50.0% | |
| ! | GTGGTGGAGATGCAATGGTA+TGG | - | chr2_3:4945268-4945287 | None:intergenic | 50.0% |
| ! | TGTGTGTGGTGGAGATGCAA+TGG | - | chr2_3:4945273-4945292 | None:intergenic | 50.0% |
| TGTGTGAGGATGTGTGTGTG+TGG | - | chr2_3:4945287-4945306 | None:intergenic | 50.0% | |
| GATGTGTGTGGATGTGTGTG+AGG | - | chr2_3:4945301-4945320 | None:intergenic | 50.0% | |
| !! | AACGGCCAGGATTGGTTCTA+TGG | + | chr2_3:4945321-4945340 | Msa0273420:intron | 50.0% |
| !! | GATTGGTTCTATGGCGCCAA+TGG | + | chr2_3:4945330-4945349 | Msa0273420:intron | 50.0% |
| !! | TGCCATAGCAATGGTGCCAT+TGG | - | chr2_3:4945349-4945368 | None:intergenic | 50.0% |
| AACTGACACGTGTCAGACAG+TGG | - | chr2_3:4945399-4945418 | None:intergenic | 50.0% | |
| GGCAGTGGTGAATAACTTGG+AGG | + | chr2_3:4945524-4945543 | Msa0273420:intron | 50.0% | |
| ACAGGGTCCCTAGCAAAAGT+TGG | - | chr2_3:4945648-4945667 | None:intergenic | 50.0% | |
| TGCAGGGTAAGCAATCAGGA+AGG | + | chr2_3:4946091-4946110 | Msa0273420:intron | 50.0% | |
| GCAGGGTAAGCAATCAGGAA+GGG | + | chr2_3:4946092-4946111 | Msa0273420:intron | 50.0% | |
| AGAAGCAGCTGTCGAAGAAG+CGG | + | chr2_3:4946117-4946136 | Msa0273420:CDS | 50.0% | |
| ! | TAGGGTAGCAAAGGCACAGA+AGG | + | chr2_3:4946192-4946211 | Msa0273420:CDS | 50.0% |
| CCAATAGCTGTAATGCCCTC+CGG | + | chr2_3:4946247-4946266 | Msa0273420:CDS | 50.0% | |
| GGTACAAGTCCTTTACCGGA+GGG | - | chr2_3:4946265-4946284 | None:intergenic | 50.0% | |
| TGGTACAAGTCCTTTACCGG+AGG | - | chr2_3:4946266-4946285 | None:intergenic | 50.0% | |
| GCTGTCAGTACTAGCTACTG+TGG | + | chr2_3:4946322-4946341 | Msa0273420:CDS | 50.0% | |
| TTGCCAATGGTGACCCGATT+GGG | - | chr2_3:4946460-4946479 | None:intergenic | 50.0% | |
| ATTGCCAATGGTGACCCGAT+TGG | - | chr2_3:4946461-4946480 | None:intergenic | 50.0% | |
| AATCGGGTCACCATTGGCAA+TGG | + | chr2_3:4946460-4946479 | Msa0273420:CDS | 50.0% | |
| ACGGTAATTCTCCACAGCTG+TGG | - | chr2_3:4946554-4946573 | None:intergenic | 50.0% | |
| CCGGCGGAACATAGATTCTA+CGG | - | chr2_3:4946573-4946592 | None:intergenic | 50.0% | |
| CCGTAGAATCTATGTTCCGC+CGG | + | chr2_3:4946570-4946589 | Msa0273420:CDS | 50.0% | |
| CGTAGAATCTATGTTCCGCC+GGG | + | chr2_3:4946571-4946590 | Msa0273420:CDS | 50.0% | |
| !! | CATTCCTTTGAAGCGGGAGA+AGG | + | chr2_3:4946594-4946613 | Msa0273420:CDS | 50.0% |
| TCATCCTTCTCCCGCTTCAA+AGG | - | chr2_3:4946601-4946620 | None:intergenic | 50.0% | |
| CTCCGTTTGCCTGAGAATTG+CGG | + | chr2_3:4947094-4947113 | Msa0273420:CDS | 50.0% | |
| TCCGTTTGCCTGAGAATTGC+GGG | + | chr2_3:4947095-4947114 | Msa0273420:CDS | 50.0% | |
| ACCCGCAATTCTCAGGCAAA+CGG | - | chr2_3:4947099-4947118 | None:intergenic | 50.0% | |
| !! | TGGTCAGTAGGTGCTACTCT+TGG | + | chr2_3:4947260-4947279 | Msa0273420:CDS | 50.0% |
| CCTGTGCCGTCACCTAAATA+AGG | - | chr2_3:4947458-4947477 | None:intergenic | 50.0% | |
| ! | CCTTATTTAGGTGACGGCAC+AGG | + | chr2_3:4947455-4947474 | Msa0273420:intron | 50.0% |
| ATGGATGGCACTCACAAAGC+GGG | - | chr2_3:4947604-4947623 | None:intergenic | 50.0% | |
| ! | GAGTGCCATCCATAATGGAG+AGG | + | chr2_3:4947611-4947630 | Msa0273420:CDS | 50.0% |
| ! | GTGCCATCCATAATGGAGAG+GGG | + | chr2_3:4947613-4947632 | Msa0273420:CDS | 50.0% |
| AGTTGCTAGAATGGGGATCC+CGG | + | chr2_3:4947893-4947912 | Msa0273420:CDS | 50.0% | |
| ATGGAGCACAACTGGGAGGA+GGG | - | chr2_3:4944581-4944600 | None:intergenic | 55.0% | |
| ATCACAGGTGAAGGGACGGA+CGG | - | chr2_3:4944607-4944626 | None:intergenic | 55.0% | |
| ! | ACCTGTGATGGAACGATGGG+CGG | + | chr2_3:4944618-4944637 | Msa0273420:CDS | 55.0% |
| CGCGATGTCTTCTCTGTTCC+CGG | + | chr2_3:4944675-4944694 | Msa0273420:CDS | 55.0% | |
| TGTCAGACCGGACTCCACTT+TGG | + | chr2_3:4945228-4945247 | Msa0273420:intron | 55.0% | |
| GTGAGGATGTGTGTGTGTGG+TGG | - | chr2_3:4945284-4945303 | None:intergenic | 55.0% | |
| ATCCACACACATCAACGGCC+AGG | + | chr2_3:4945308-4945327 | Msa0273420:intron | 55.0% | |
| ATCCTGGCCGTTGATGTGTG+TGG | - | chr2_3:4945313-4945332 | None:intergenic | 55.0% | |
| CACACATCAACGGCCAGGAT+TGG | + | chr2_3:4945313-4945332 | Msa0273420:intron | 55.0% | |
| TGGCGCCATAGAACCAATCC+TGG | - | chr2_3:4945329-4945348 | None:intergenic | 55.0% | |
| CGCCAATGGCACCATTGCTA+TGG | + | chr2_3:4945344-4945363 | Msa0273420:intron | 55.0% | |
| ACAGTGGCATGGGTCTGACA+GGG | - | chr2_3:4945383-4945402 | None:intergenic | 55.0% | |
| CACGTGTCAGACAGTGGCAT+GGG | - | chr2_3:4945393-4945412 | None:intergenic | 55.0% | |
| ACACGTGTCAGACAGTGGCA+TGG | - | chr2_3:4945394-4945413 | None:intergenic | 55.0% | |
| CGGTGGTACGAGTTTGACCT+TGG | + | chr2_3:4945896-4945915 | Msa0273420:intron | 55.0% | |
| AGCTGTGAAGCCAGTGATCG+TGG | + | chr2_3:4946156-4946175 | Msa0273420:CDS | 55.0% | |
| GCTGTGAAGCCAGTGATCGT+GGG | + | chr2_3:4946157-4946176 | Msa0273420:CDS | 55.0% | |
| !! | CCGGAGGGCATTACAGCTAT+TGG | - | chr2_3:4946250-4946269 | None:intergenic | 55.0% |
| GCTGTAATGCCCTCCGGTAA+AGG | + | chr2_3:4946253-4946272 | Msa0273420:CDS | 55.0% | |
| TCCCGCTTCAAAGGAATGCC+CGG | - | chr2_3:4946592-4946611 | None:intergenic | 55.0% | |
| GGGGAAATGCTGGACTGCTA+AGG | + | chr2_3:4947632-4947651 | Msa0273420:CDS | 55.0% | |
| GTTGCTAGAATGGGGATCCC+GGG | + | chr2_3:4947894-4947913 | Msa0273420:CDS | 55.0% | |
| GATGGAGCACAACTGGGAGG+AGG | - | chr2_3:4944582-4944601 | None:intergenic | 60.0% | |
| ACGGCGGATGGAGCACAACT+GGG | - | chr2_3:4944588-4944607 | None:intergenic | 60.0% | |
| GTCCGTCCCTTCACCTGTGA+TGG | + | chr2_3:4944606-4944625 | Msa0273420:CDS | 60.0% | |
| TGACCACCTGATCGCTGAGC+CGG | + | chr2_3:4944719-4944738 | Msa0273420:CDS | 60.0% | |
| CAACCGACGAGGTTGAGCTC+CGG | - | chr2_3:4944741-4944760 | None:intergenic | 60.0% | |
| GCTCGTTACAGCAACCGACG+AGG | - | chr2_3:4944752-4944771 | None:intergenic | 60.0% | |
| TGACGGTTACGCACGTGCCA+AGG | + | chr2_3:4944791-4944810 | Msa0273420:CDS | 60.0% | |
| GACGGTTACGCACGTGCCAA+GGG | + | chr2_3:4944792-4944811 | Msa0273420:CDS | 60.0% | |
| TACGCACGTGCCAAGGGAGT+TGG | + | chr2_3:4944798-4944817 | Msa0273420:CDS | 60.0% | |
| AACACACGCGCCAACTCCCT+TGG | - | chr2_3:4944811-4944830 | None:intergenic | 60.0% | |
| GACAGTGGCATGGGTCTGAC+AGG | - | chr2_3:4945384-4945403 | None:intergenic | 60.0% | |
| GTGAAGCCAGTGATCGTGGG+CGG | + | chr2_3:4946160-4946179 | Msa0273420:CDS | 60.0% | |
| TGAAGCCAGTGATCGTGGGC+GGG | + | chr2_3:4946161-4946180 | Msa0273420:CDS | 60.0% | |
| TCGTGGGCGGGCCAAAACTT+AGG | + | chr2_3:4946173-4946192 | Msa0273420:CDS | 60.0% | |
| CGTGGGCGGGCCAAAACTTA+GGG | + | chr2_3:4946174-4946193 | Msa0273420:CDS | 60.0% | |
| CAGCCCAATCGGGTCACCAT+TGG | + | chr2_3:4946454-4946473 | Msa0273420:CDS | 60.0% | |
| CGCTTCAAAGGAATGCCCGG+CGG | - | chr2_3:4946589-4946608 | None:intergenic | 60.0% | |
| ! | CGCCGGGCATTCCTTTGAAG+CGG | + | chr2_3:4946587-4946606 | Msa0273420:CDS | 60.0% |
| !! | GCCGGGCATTCCTTTGAAGC+GGG | + | chr2_3:4946588-4946607 | Msa0273420:CDS | 60.0% |
| GCTGTTAGCAGCAGCAACCC+GGG | - | chr2_3:4947914-4947933 | None:intergenic | 60.0% | |
| GGCTGTTAGCAGCAGCAACC+CGG | - | chr2_3:4947915-4947934 | None:intergenic | 60.0% | |
| GCGGATGGAGCACAACTGGG+AGG | - | chr2_3:4944585-4944604 | None:intergenic | 65.0% | |
| GACGGCGGATGGAGCACAAC+TGG | - | chr2_3:4944589-4944608 | None:intergenic | 65.0% | |
| ACAGGTGAAGGGACGGACGG+CGG | - | chr2_3:4944604-4944623 | None:intergenic | 65.0% | |
| GCCGCCCATCGTTCCATCAC+AGG | - | chr2_3:4944622-4944641 | None:intergenic | 65.0% | |
| TGAGCTCCGGCTCAGCGATC+AGG | - | chr2_3:4944728-4944747 | None:intergenic | 65.0% | |
| GAGCCGGAGCTCAACCTCGT+CGG | + | chr2_3:4944735-4944754 | Msa0273420:CDS | 65.0% | |
| TTTGGCCCGCCCACGATCAC+TGG | - | chr2_3:4946169-4946188 | None:intergenic | 65.0% | |
| GTGAAGGGACGGACGGCGGA+TGG | - | chr2_3:4944600-4944619 | None:intergenic | 70.0% | |
| CGATGGGCGGCCACCTTGCA+CGG | + | chr2_3:4944631-4944650 | Msa0273420:CDS | 70.0% | |
| !! | TCTCGACGAGGCGCCGTGCA+AGG | - | chr2_3:4944647-4944666 | None:intergenic | 70.0% |
| GCACGGCGCCTCGTCGAGAT+CGG | + | chr2_3:4944648-4944667 | Msa0273420:CDS | 70.0% | |
| CGCGAACGCCGATCTCGACG+AGG | - | chr2_3:4944659-4944678 | None:intergenic | 70.0% | |
| GCTCCGGCTCAGCGATCAGG+TGG | - | chr2_3:4944725-4944744 | None:intergenic | 70.0% | |
| !! | CGACGAGGCGCCGTGCAAGG+TGG | - | chr2_3:4944644-4944663 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 4944417 | 4948237 | 4944417 | ID=Msa0273420;Name=Msa0273420 |
| chr2_3 | mRNA | 4944417 | 4948237 | 4944417 | ID=Msa0273420-mRNA-1;Parent=Msa0273420;Name=Msa0273420-mRNA-1;_AED=0.02;_eAED=0.02;_QI=141|1|1|1|1|1|7|283|586 |
| chr2_3 | exon | 4944417 | 4945025 | 4944417 | ID=Msa0273420-mRNA-1:exon:2429;Parent=Msa0273420-mRNA-1 |
| chr2_3 | exon | 4945525 | 4945688 | 4945525 | ID=Msa0273420-mRNA-1:exon:2430;Parent=Msa0273420-mRNA-1 |
| chr2_3 | exon | 4946096 | 4946657 | 4946096 | ID=Msa0273420-mRNA-1:exon:2431;Parent=Msa0273420-mRNA-1 |
| chr2_3 | exon | 4947028 | 4947116 | 4947028 | ID=Msa0273420-mRNA-1:exon:2432;Parent=Msa0273420-mRNA-1 |
| chr2_3 | exon | 4947226 | 4947343 | 4947226 | ID=Msa0273420-mRNA-1:exon:2433;Parent=Msa0273420-mRNA-1 |
| chr2_3 | exon | 4947465 | 4947653 | 4947465 | ID=Msa0273420-mRNA-1:exon:2434;Parent=Msa0273420-mRNA-1 |
| chr2_3 | exon | 4947784 | 4948237 | 4947784 | ID=Msa0273420-mRNA-1:exon:2435;Parent=Msa0273420-mRNA-1 |
| chr2_3 | five_prime_UTR | 4944417 | 4944557 | 4944417 | ID=Msa0273420-mRNA-1:five_prime_utr;Parent=Msa0273420-mRNA-1 |
| chr2_3 | CDS | 4944558 | 4945025 | 4944558 | ID=Msa0273420-mRNA-1:cds;Parent=Msa0273420-mRNA-1 |
| chr2_3 | CDS | 4945525 | 4945688 | 4945525 | ID=Msa0273420-mRNA-1:cds;Parent=Msa0273420-mRNA-1 |
| chr2_3 | CDS | 4946096 | 4946657 | 4946096 | ID=Msa0273420-mRNA-1:cds;Parent=Msa0273420-mRNA-1 |
| chr2_3 | CDS | 4947028 | 4947116 | 4947028 | ID=Msa0273420-mRNA-1:cds;Parent=Msa0273420-mRNA-1 |
| chr2_3 | CDS | 4947226 | 4947343 | 4947226 | ID=Msa0273420-mRNA-1:cds;Parent=Msa0273420-mRNA-1 |
| chr2_3 | CDS | 4947465 | 4947653 | 4947465 | ID=Msa0273420-mRNA-1:cds;Parent=Msa0273420-mRNA-1 |
| chr2_3 | CDS | 4947784 | 4947954 | 4947784 | ID=Msa0273420-mRNA-1:cds;Parent=Msa0273420-mRNA-1 |
| chr2_3 | three_prime_UTR | 4947955 | 4948237 | 4947955 | ID=Msa0273420-mRNA-1:three_prime_utr;Parent=Msa0273420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
