AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1049820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049820 MtrunA17_Chr3g0127401 90.222 225 16 2 13 231 24 248 1.75e-142 403
Msa1049820 MtrunA17_Chr3g0127431 79.310 232 41 3 7 231 20 251 6.60e-127 365
Msa1049820 MtrunA17_Chr3g0116131 55.502 209 87 3 20 227 863 1066 3.99e-70 232
Msa1049820 MtrunA17_Chr1g0195731 55.714 210 90 3 19 227 891 1098 7.95e-70 231
Msa1049820 MtrunA17_Chr8g0387641 61.326 181 68 2 46 225 503 682 1.37e-69 228
Msa1049820 MtrunA17_Chr1g0195741 59.016 183 74 1 46 227 920 1102 5.16e-69 229
Msa1049820 MtrunA17_Chr4g0038101 52.444 225 95 4 6 227 670 885 8.77e-69 228
Msa1049820 MtrunA17_Chr5g0397121 58.564 181 73 2 46 225 495 674 5.67e-65 215
Msa1049820 MtrunA17_Chr6g0462581 52.830 212 92 3 21 225 451 661 7.27e-65 215
Msa1049820 MtrunA17_Chr1g0202371 55.000 180 81 0 46 225 379 558 3.54e-60 201
Msa1049820 MtrunA17_Chr1g0202381 55.249 181 80 1 46 225 450 630 5.55e-60 201
Msa1049820 MtrunA17_Chr1g0204031 55.801 181 79 1 46 225 539 719 3.37e-59 200
Msa1049820 MtrunA17_Chr7g0246111 41.850 227 125 3 7 228 150 374 3.08e-52 176
Msa1049820 MtrunA17_Chr4g0052271 47.059 187 91 5 44 227 100 281 1.94e-45 156
Msa1049820 MtrunA17_Chr6g0459541 47.727 176 80 5 56 227 37 204 3.07e-45 154
Msa1049820 MtrunA17_Chr6g0459561 45.198 177 92 4 52 227 371 543 6.28e-45 159
Msa1049820 MtrunA17_Chr2g0321241 45.122 164 86 3 63 225 131 291 1.56e-41 146
Msa1049820 MtrunA17_Chr4g0026631 45.122 164 86 3 63 225 126 286 9.92e-41 144
Msa1049820 MtrunA17_Chr6g0459551 41.530 183 100 4 45 227 84 259 1.39e-40 144
Msa1049820 MtrunA17_Chr4g0004121 45.614 171 84 4 64 227 242 410 2.15e-39 142
Msa1049820 MtrunA17_Chr1g0180791 41.765 170 91 4 60 226 200 364 6.19e-35 131
Msa1049820 MtrunA17_Chr1g0180791 41.176 170 86 4 63 225 477 639 2.94e-32 124
Msa1049820 MtrunA17_Chr3g0145011 40.113 177 104 2 50 225 125 300 1.04e-34 127
Msa1049820 MtrunA17_Chr7g0264521 41.566 166 90 3 63 226 205 365 1.95e-34 130
Msa1049820 MtrunA17_Chr7g0264521 41.176 170 86 4 63 225 478 640 7.60e-32 122
Msa1049820 MtrunA17_Chr3g0141901 39.548 177 105 2 50 225 122 297 4.07e-34 126
Msa1049820 MtrunA17_Chr3g0108321 43.976 166 87 3 63 225 158 320 4.29e-34 125
Msa1049820 MtrunA17_Chr2g0327121 41.463 164 93 2 63 226 206 366 2.23e-33 127
Msa1049820 MtrunA17_Chr2g0327121 41.176 170 86 4 63 225 479 641 4.11e-32 123
Msa1049820 MtrunA17_Chr4g0050561 41.667 168 89 4 63 225 155 318 1.57e-31 119
Msa1049820 MtrunA17_Chr1g0192151 42.515 167 84 6 65 225 168 328 1.66e-31 119
Msa1049820 MtrunA17_Chr4g0014731 42.515 167 84 6 65 225 169 329 1.96e-31 119
Msa1049820 MtrunA17_Chr7g0262801 42.683 164 86 4 66 225 189 348 4.50e-31 118
Msa1049820 MtrunA17_Chr7g0255901 38.462 169 99 3 59 225 634 799 8.13e-31 119
Msa1049820 MtrunA17_Chr2g0327231 40.237 169 87 4 63 224 345 506 1.08e-30 118
Msa1049820 MtrunA17_Chr2g0327231 39.362 94 48 3 63 154 152 238 2.63e-12 65.9
Msa1049820 MtrunA17_Chr1g0182711 42.073 164 87 4 66 225 190 349 1.31e-30 117
Msa1049820 MtrunA17_Chr1g0200081 40.476 168 90 5 63 225 174 336 5.61e-30 115
Msa1049820 MtrunA17_Chr8g0345461 40.476 168 90 5 63 225 164 326 7.16e-30 115
Msa1049820 MtrunA17_Chr6g0459531 36.970 165 75 3 63 227 66 201 3.55e-28 108
Msa1049820 MtrunA17_Chr4g0033451 38.636 176 98 4 57 225 371 543 9.45e-28 110
Msa1049820 MtrunA17_Chr7g0255721 37.126 167 94 5 64 225 685 845 1.60e-26 107
Msa1049820 MtrunA17_Chr7g0255721 29.148 223 142 6 12 225 327 542 1.76e-18 84.0
Msa1049820 MtrunA17_Chr2g0277831 31.902 163 108 2 63 225 532 691 3.16e-26 106
Msa1049820 MtrunA17_Chr2g0277831 37.195 164 95 4 66 225 245 404 2.83e-24 100
Msa1049820 MtrunA17_Chr2g0289231 35.294 170 100 3 63 224 296 463 7.79e-26 105
Msa1049820 MtrunA17_Chr3g0086411 32.515 163 107 2 63 225 214 373 9.12e-26 104
Msa1049820 MtrunA17_Chr7g0255641 36.527 167 95 5 64 225 658 818 1.14e-25 104
Msa1049820 MtrunA17_Chr7g0255641 30.539 167 105 5 62 225 391 549 3.74e-15 74.3
Msa1049820 MtrunA17_Chr6g0456351 38.323 167 99 2 59 225 312 474 1.54e-25 104
Msa1049820 MtrunA17_Chr3g0135761 36.816 201 97 6 32 225 202 379 3.16e-25 103
Msa1049820 MtrunA17_Chr7g0255651 37.576 165 97 3 64 225 282 443 8.47e-25 102
Msa1049820 MtrunA17_Chr7g0255651 33.117 154 92 5 77 225 30 177 4.21e-11 62.0
Msa1049820 MtrunA17_Chr3g0086401 36.364 165 100 4 63 226 384 544 1.19e-24 101
Msa1049820 MtrunA17_Chr3g0086401 31.724 145 88 4 87 225 116 255 1.10e-15 75.9
Msa1049820 MtrunA17_Chr7g0248361 40.237 169 87 6 64 225 192 353 2.06e-24 101
Msa1049820 MtrunA17_Chr7g0260601 39.766 171 85 6 64 225 240 401 2.85e-24 100
Msa1049820 MtrunA17_Chr3g0129971 40.351 171 85 6 64 225 296 458 4.97e-24 100
Msa1049820 MtrunA17_Chr3g0135721 38.415 164 93 4 64 225 224 381 5.27e-24 100
Msa1049820 MtrunA17_Chr3g0135781 38.182 165 94 4 63 225 54 212 5.43e-24 95.5
Msa1049820 MtrunA17_Chr2g0316851 33.939 165 101 3 66 225 596 757 8.89e-24 99.4
Msa1049820 MtrunA17_Chr8g0362771 38.554 166 93 5 63 225 236 395 1.58e-23 98.6
Msa1049820 MtrunA17_Chr4g0031821 39.053 169 89 6 64 225 320 481 1.61e-23 98.6
Msa1049820 MtrunA17_Chr4g0052411 36.905 168 99 4 61 225 226 389 7.38e-23 96.7
Msa1049820 MtrunA17_Chr6g0476861 38.953 172 85 7 64 225 197 358 8.07e-23 96.7
Msa1049820 MtrunA17_Chr7g0217421 38.182 165 95 4 64 225 39 199 1.04e-22 95.1
Msa1049820 MtrunA17_Chr2g0297281 36.970 165 97 4 64 225 286 446 2.66e-22 95.1
Msa1049820 MtrunA17_Chr5g0432631 36.970 165 96 4 63 225 228 386 3.89e-22 94.7
Msa1049820 MtrunA17_Chr4g0043381 35.625 160 100 2 66 225 839 995 6.80e-22 94.0
Msa1049820 MtrunA17_Chr7g0255691 37.126 167 95 4 64 225 286 447 6.87e-22 93.6
Msa1049820 MtrunA17_Chr7g0255691 37.126 167 92 6 67 225 20 181 2.28e-18 83.6
Msa1049820 MtrunA17_Chr3g0104211 38.690 168 91 5 64 225 304 465 9.51e-22 93.6
Msa1049820 MtrunA17_Chr3g0094871 36.905 168 93 6 64 225 11 171 1.31e-21 92.4
Msa1049820 MtrunA17_Chr5g0429571 38.095 168 92 5 64 225 313 474 2.74e-21 92.0
Msa1049820 MtrunA17_Chr3g0143721 37.126 167 94 5 64 225 249 409 6.26e-21 90.9
Msa1049820 MtrunA17_Chr2g0331161 32.386 176 94 6 62 225 413 575 4.71e-20 88.6
Msa1049820 MtrunA17_Chr1g0158881 37.278 169 83 6 66 225 331 485 3.31e-19 86.3
Msa1049820 MtrunA17_Chr5g0432641 34.239 184 112 5 45 225 171 348 4.81e-19 85.5
Msa1049820 MtrunA17_Chr8g0388371 34.682 173 98 6 64 225 404 572 8.35e-18 82.0
Msa1049820 MtrunA17_Chr4g0062081 47.500 80 36 3 69 145 12 88 1.99e-14 67.0
Msa1049820 MtrunA17_Chr5g0404291 36.000 125 75 3 100 223 386 506 5.96e-14 70.5
Msa1049820 MtrunA17_Chr8g0357301 37.500 136 64 6 103 225 507 634 8.03e-14 70.5
Msa1049820 MtrunA17_Chr1g0190401 29.586 169 105 6 64 225 677 838 1.31e-13 69.7
Msa1049820 MtrunA17_Chr4g0047411 32.847 137 73 5 103 225 214 345 1.04e-11 63.9
Msa1049820 MtrunA17_Chr6g0450161 33.871 124 77 3 101 223 362 481 2.08e-11 63.2
Msa1049820 MtrunA17_Chr4g0039781 34.127 126 74 4 101 223 368 487 3.21e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049820 AT4G27680.1 79.310 232 41 3 7 231 17 248 1.45e-127 366
Msa1049820 AT5G53540.1 75.983 229 49 2 3 225 17 245 1.14e-121 352
Msa1049820 AT4G02480.1 60.656 183 71 1 46 227 942 1124 7.83e-71 235
Msa1049820 AT1G02890.1 60.109 183 72 1 46 227 923 1105 1.58e-69 231
Msa1049820 AT4G24860.4 60.109 183 72 1 46 227 772 954 5.61e-68 226
Msa1049820 AT4G24860.2 60.109 183 72 1 46 227 795 977 6.88e-68 226
Msa1049820 AT4G24860.3 60.109 183 72 1 46 227 797 979 7.35e-68 226
Msa1049820 AT4G24860.1 60.109 183 72 1 46 227 799 981 7.47e-68 226
Msa1049820 AT1G64110.1 60.221 181 70 2 46 225 495 674 7.96e-68 223
Msa1049820 AT1G64110.5 60.221 181 70 2 46 225 498 677 1.02e-67 223
Msa1049820 AT1G64110.3 60.221 181 70 2 46 225 498 677 1.02e-67 223
Msa1049820 AT1G64110.2 60.221 181 70 2 46 225 500 679 1.11e-67 223
Msa1049820 AT1G64110.4 60.221 181 70 2 46 225 500 679 1.11e-67 223
Msa1049820 AT3G19740.1 55.224 201 84 2 28 227 670 865 2.28e-66 221
Msa1049820 AT1G50140.3 54.229 201 82 2 28 227 684 875 7.38e-65 217
Msa1049820 AT1G50140.1 54.229 201 82 2 28 227 684 875 7.38e-65 217
Msa1049820 AT1G50140.4 54.229 201 82 2 28 227 684 875 7.38e-65 217
Msa1049820 AT1G50140.2 54.229 201 82 2 28 227 662 853 7.75e-65 217
Msa1049820 AT1G50140.5 54.229 201 82 2 28 227 662 853 7.75e-65 217
Msa1049820 AT5G52882.1 59.116 181 72 2 46 225 496 675 1.52e-64 214
Msa1049820 AT4G28000.3 58.011 181 74 2 46 225 499 678 1.80e-64 214
Msa1049820 AT4G28000.1 58.011 181 74 2 46 225 497 676 2.72e-64 214
Msa1049820 AT4G28000.2 58.011 181 74 2 46 225 499 678 2.92e-64 214
Msa1049820 AT1G62130.2 49.296 213 86 4 15 227 705 895 2.10e-55 190
Msa1049820 AT1G62130.1 49.296 213 86 4 15 227 712 902 2.28e-55 190
Msa1049820 AT2G45500.4 46.392 194 96 4 40 228 52 242 2.11e-53 176
Msa1049820 AT2G45500.3 46.392 194 96 4 40 228 52 242 2.11e-53 176
Msa1049820 AT2G45500.1 46.392 194 96 4 40 228 189 379 3.74e-52 176
Msa1049820 AT2G45500.2 46.392 194 96 4 40 228 185 375 4.11e-52 176
Msa1049820 AT2G45500.5 46.392 194 96 4 40 228 195 385 5.05e-52 176
Msa1049820 AT1G02890.2 50.273 183 62 2 46 227 923 1077 1.07e-49 174
Msa1049820 AT2G34560.1 46.032 189 91 5 44 227 81 263 3.99e-45 155
Msa1049820 AT2G34560.2 46.032 189 91 5 44 227 90 272 4.52e-45 155
Msa1049820 AT3G27120.1 45.763 177 91 4 52 227 389 561 5.69e-45 159
Msa1049820 AT2G27600.1 44.512 164 87 3 63 225 128 288 1.11e-39 142
Msa1049820 AT1G80350.1 45.614 171 84 4 64 227 236 404 2.04e-39 142
Msa1049820 AT3G09840.1 42.169 166 89 3 63 226 203 363 2.66e-35 133
Msa1049820 AT3G09840.1 38.922 167 95 3 63 225 476 639 1.47e-30 119
Msa1049820 AT5G03340.1 41.566 166 90 3 63 226 203 363 9.14e-35 131
Msa1049820 AT5G03340.1 41.176 170 86 4 63 225 476 638 7.22e-32 123
Msa1049820 AT3G53230.1 41.566 166 90 3 63 226 204 364 2.50e-34 130
Msa1049820 AT3G53230.1 40.588 170 87 4 63 225 477 639 2.52e-31 121
Msa1049820 AT1G45000.1 39.548 177 105 2 50 225 122 297 4.03e-34 126
Msa1049820 AT5G58290.1 43.976 166 87 3 63 225 151 313 5.18e-34 126
Msa1049820 AT5G43010.1 38.983 177 106 2 50 225 122 297 1.87e-33 124
Msa1049820 AT1G03000.1 40.237 169 96 3 59 225 650 815 8.36e-32 123
Msa1049820 AT5G19990.2 41.667 168 89 4 63 225 99 262 1.29e-31 119
Msa1049820 AT4G29040.1 43.636 165 83 5 66 225 187 346 1.61e-31 120
Msa1049820 AT3G05530.1 42.262 168 83 6 65 225 169 329 1.67e-31 120
Msa1049820 AT2G20140.1 42.593 162 89 3 66 225 187 346 1.77e-31 120
Msa1049820 AT5G19990.1 41.667 168 89 4 63 225 157 320 1.92e-31 119
Msa1049820 AT5G19990.3 41.667 168 89 4 63 225 157 320 1.92e-31 119
Msa1049820 AT5G20000.1 41.667 168 89 4 63 225 157 320 2.27e-31 119
Msa1049820 AT1G09100.1 42.262 168 83 6 65 225 168 328 7.98e-31 118
Msa1049820 AT1G53750.1 40.476 168 90 5 63 225 164 326 9.79e-30 115
Msa1049820 AT1G53780.1 39.645 169 90 5 63 225 336 498 2.71e-28 112
Msa1049820 AT1G53780.4 39.645 169 90 5 63 225 336 498 2.71e-28 112
Msa1049820 AT1G53780.3 39.645 169 90 5 63 225 335 497 2.73e-28 112
Msa1049820 AT1G53780.2 39.645 169 90 5 63 225 357 519 2.97e-28 112
Msa1049820 AT1G45000.2 38.000 150 92 1 50 199 122 270 1.44e-27 107
Msa1049820 AT1G05910.1 37.500 168 97 3 63 225 377 541 4.58e-27 109
Msa1049820 AT3G56690.1 37.725 167 93 5 64 225 721 881 5.49e-27 108
Msa1049820 AT3G56690.1 37.795 127 77 1 99 225 415 539 3.81e-23 98.2
Msa1049820 AT3G02450.1 40.244 164 90 4 64 225 331 488 5.72e-26 105
Msa1049820 AT4G04180.2 31.481 216 130 7 18 224 271 477 1.28e-25 104
Msa1049820 AT4G04180.1 31.481 216 130 7 18 224 276 482 1.29e-25 104
Msa1049820 AT2G26140.1 39.634 164 91 4 64 225 224 381 4.97e-25 103
Msa1049820 AT3G01610.2 36.471 170 95 4 66 225 232 398 5.44e-25 103
Msa1049820 AT3G01610.2 34.545 165 100 3 63 225 524 682 9.34e-22 94.0
Msa1049820 AT3G01610.1 36.471 170 95 4 66 225 232 398 5.58e-25 103
Msa1049820 AT3G01610.1 34.545 165 100 3 63 225 524 682 9.05e-22 94.0
Msa1049820 AT3G15120.2 35.152 165 99 4 66 225 728 889 9.36e-25 102
Msa1049820 AT3G15120.1 35.152 165 99 4 66 225 718 879 1.05e-24 102
Msa1049820 AT1G07510.1 39.645 169 88 6 64 225 324 485 1.13e-23 99.4
Msa1049820 AT5G64580.1 40.351 171 85 6 64 225 313 475 2.11e-23 98.6
Msa1049820 AT2G29080.1 38.286 175 81 6 64 225 319 479 6.06e-23 97.4
Msa1049820 AT1G06430.1 36.905 168 99 4 61 225 214 377 1.50e-22 96.3
Msa1049820 AT1G06430.3 36.905 168 99 4 61 225 214 377 1.50e-22 96.3
Msa1049820 AT1G06430.2 36.905 168 99 4 61 225 214 377 1.50e-22 96.3
Msa1049820 AT2G30950.1 36.905 168 99 4 61 225 221 384 1.88e-22 95.9
Msa1049820 AT2G30950.2 36.905 168 99 4 61 225 221 384 1.88e-22 95.9
Msa1049820 AT2G30950.3 36.905 168 99 4 61 225 221 384 1.88e-22 95.9
Msa1049820 AT5G15250.2 38.095 168 91 6 64 225 221 381 1.97e-22 95.5
Msa1049820 AT2G30950.4 36.905 168 99 4 61 225 225 388 2.07e-22 95.9
Msa1049820 AT5G15250.1 38.095 168 91 6 64 225 221 381 2.96e-22 95.1
Msa1049820 AT5G58870.1 38.372 172 94 5 60 225 322 487 1.77e-21 93.2
Msa1049820 AT2G03670.2 35.165 182 110 6 49 225 5 183 2.21e-21 92.0
Msa1049820 AT2G03670.2 36.842 114 71 1 64 177 283 395 3.52e-13 68.6
Msa1049820 AT2G03670.1 34.783 184 108 7 49 225 5 183 3.83e-21 92.0
Msa1049820 AT2G03670.1 34.940 166 101 4 64 225 283 445 2.67e-19 86.7
Msa1049820 AT5G08470.3 35.000 160 101 2 66 225 834 990 5.73e-21 91.7
Msa1049820 AT1G50250.1 37.126 167 94 5 64 225 259 419 5.93e-21 91.7
Msa1049820 AT5G08470.1 35.000 160 101 2 66 225 843 999 6.25e-21 91.7
Msa1049820 AT5G42270.1 37.126 167 94 5 64 225 247 407 6.80e-21 91.3
Msa1049820 AT5G53170.1 37.079 178 89 6 57 225 352 515 3.43e-20 89.4
Msa1049820 AT3G47060.1 36.905 168 94 5 64 225 322 483 4.26e-20 89.0
Msa1049820 AT3G16290.1 32.955 176 93 6 62 225 405 567 8.32e-20 88.2
Msa1049820 AT4G23940.1 36.416 173 95 6 64 225 427 595 3.31e-18 83.6
Msa1049820 AT5G08470.2 32.727 165 107 3 66 230 843 1003 4.46e-18 83.2
Msa1049820 AT1G79560.3 38.235 136 63 6 103 225 527 654 2.06e-15 75.5
Msa1049820 AT1G79560.2 38.235 136 63 6 103 225 527 654 2.24e-15 75.5
Msa1049820 AT1G79560.1 38.235 136 63 6 103 225 527 654 2.33e-15 75.5
Msa1049820 AT3G04340.1 31.073 177 105 7 56 225 776 942 1.83e-14 72.8
Msa1049820 AT2G18330.1 33.871 124 77 3 101 223 384 503 6.91e-13 67.8
Msa1049820 AT4G36580.1 32.800 125 79 3 100 223 380 500 1.38e-11 63.9
Msa1049820 AT5G16930.1 33.588 131 68 4 101 223 397 516 4.06e-11 62.8
Msa1049820 AT3G03060.1 33.588 131 68 4 101 223 385 504 4.55e-11 62.4

Find 61 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACACACTTACCAAGCTTT+TGG 0.273433 7_2:+13355090 None:intergenic
CCCCGAACCATTTGCTCATC+AGG 0.276183 7_2:+13355117 None:intergenic
AAACTGAGTTCATGGCTCTA+TGG 0.320401 7_2:-13352976 Msa1049820:CDS
ACCTGATGAGCAAATGGTTC+GGG 0.335944 7_2:-13355118 Msa1049820:CDS
AATGGTTACCTCATAGGAAT+TGG 0.349196 7_2:+13359380 None:intergenic
TACTTCATCGATGAATATAA+TGG 0.362913 7_2:+13353054 None:intergenic
AAAACAAGTCTGGTCGTTGC+AGG 0.370845 7_2:+13355270 None:intergenic
TCTCCGATGATTCACGGTTC+AGG 0.373936 7_2:+13359448 None:intergenic
ACAGATGAAAACTGAGTTCA+TGG 0.378756 7_2:-13352984 Msa1049820:CDS
TTGTATGGACCTCCTGGCAC+TGG 0.386661 7_2:-13355209 Msa1049820:CDS
GGCGGCGCTGTACTGCGCTT+TGG 0.390801 7_2:-13359487 Msa1049820:CDS
CTGTACTGCGCTTTGGTCAC+GGG 0.392532 7_2:-13359480 Msa1049820:CDS
CAAACTTCTTGGACCACAAA+AGG 0.392804 7_2:-13355240 Msa1049820:CDS
GATGTAGAATTTGACTCTAT+TGG 0.395873 7_2:-13355341 Msa1049820:CDS
TGTAGAGAGTGCTCGGGTTA+TGG 0.397237 7_2:-13352815 Msa1049820:intron
GCTGTACTGCGCTTTGGTCA+CGG 0.403471 7_2:-13359481 Msa1049820:CDS
TAGCCTTCTCCGATGATTCA+CGG 0.417840 7_2:+13359442 None:intergenic
GTCCTGTTGTATGGACCTCC+TGG 0.427197 7_2:-13355215 Msa1049820:CDS
CTTCTTTCGTTCAAAGGACA+TGG 0.428545 7_2:-13359532 Msa1049820:exon
AGTGTTGTCGTGCGCGGCTA+AGG 0.431113 7_2:-13359508 Msa1049820:CDS
AAACTTCTTGGACCACAAAA+GGG 0.435723 7_2:-13355239 Msa1049820:CDS
AACCTGATGAGCAAATGGTT+CGG 0.439930 7_2:-13355119 Msa1049820:CDS
TTTGGGTCAGCGTCGTTCAT+CGG 0.441745 7_2:-13353023 Msa1049820:CDS
TGCCAGGAGGTCCATACAAC+AGG 0.457002 7_2:+13355213 None:intergenic
TTGTTCCTTCTTTCGTTCAA+AGG 0.464322 7_2:-13359538 Msa1049820:five_prime_UTR
GAAAACTGCTCCGGACTCCT+TGG 0.468141 7_2:+13355160 None:intergenic
AAAGCTATTGCCAAGGAGTC+CGG 0.471305 7_2:-13355170 Msa1049820:CDS
AGTGGCTGCCGTATTTAGCT+TGG 0.481021 7_2:-13353095 Msa1049820:CDS
GTTGTTGTGTAGAGAGTGCT+CGG 0.484415 7_2:-13352822 Msa1049820:intron
AATTCTACATCGATGTGGTC+AGG 0.489405 7_2:+13355353 None:intergenic
TATCAAACCTGATGAGCAAA+TGG 0.495736 7_2:-13355124 Msa1049820:CDS
ATGATTCACGGTTCAGGTAA+CGG 0.497305 7_2:+13359454 None:intergenic
GTTGTCGTGCGCGGCTAAGG+CGG 0.498662 7_2:-13359505 Msa1049820:CDS
TTGCCATGCGAAAACAAGTC+TGG 0.509217 7_2:+13355260 None:intergenic
GTAGAATTTGACTCTATTGG+TGG 0.512184 7_2:-13355338 Msa1049820:CDS
CATGTCCTTTGAACGAAAGA+AGG 0.515103 7_2:+13359533 None:intergenic
AACTGAGTTCATGGCTCTAT+GGG 0.515199 7_2:-13352975 Msa1049820:CDS
TTCGGGGATGCCCAAAAGCT+TGG 0.516170 7_2:-13355101 Msa1049820:intron
CACATTAATGAAAACTGCTC+CGG 0.520311 7_2:+13355151 None:intergenic
TTACCTGAACCGTGAATCAT+CGG 0.528824 7_2:-13359451 Msa1049820:CDS
AAAGAGATTGCTAAACGTCT+TGG 0.531003 7_2:-13359420 Msa1049820:CDS
TTTATGAGCCAAGCTAAATA+CGG 0.532998 7_2:+13353087 None:intergenic
ATTGCTTCATCAAGTTCTGA+AGG 0.564553 7_2:+13352772 None:intergenic
TTCTTTCGTTCAAAGGACAT+GGG 0.566698 7_2:-13359531 Msa1049820:exon
AAACAAGTCTGGTCGTTGCA+GGG 0.572120 7_2:+13355271 None:intergenic
GAGTTCATGGCTCTATGGGA+TGG 0.573516 7_2:-13352971 Msa1049820:CDS
TCATCGATGAATATAATGGA+TGG 0.591454 7_2:+13353058 None:intergenic
AACAAGTCTGGTCGTTGCAG+GGG 0.601495 7_2:+13355272 None:intergenic
AACTTCTTGGACCACAAAAG+GGG 0.602558 7_2:-13355238 Msa1049820:CDS
TGTATGGACCTCCTGGCACT+GGG 0.603811 7_2:-13355208 Msa1049820:CDS
GAACCGTGAATCATCGGAGA+AGG 0.605431 7_2:-13359445 Msa1049820:CDS
TTGTTTACAGGATGTAATAG+CGG 0.608443 7_2:-13355390 Msa1049820:intron
CATGGGAGTGTTGTCGTGCG+CGG 0.609509 7_2:-13359514 Msa1049820:CDS
GCGTCGTTCATCGGATCATG+AGG 0.618033 7_2:-13353014 Msa1049820:CDS
TTGCTTCATCAAGTTCTGAA+GGG 0.630399 7_2:+13352773 None:intergenic
AACTTGATGAAGCAATACTT+CGG 0.636206 7_2:-13352765 Msa1049820:CDS
GCTCGCAAAAGCTATTGCCA+AGG 0.654543 7_2:-13355177 Msa1049820:CDS
ACTTCTTGGACCACAAAAGG+GGG 0.656597 7_2:-13355237 Msa1049820:CDS
TTGTTGTGTAGAGAGTGCTC+GGG 0.671596 7_2:-13352821 Msa1049820:intron
CCTGATGAGCAAATGGTTCG+GGG 0.682531 7_2:-13355117 Msa1049820:CDS
AGTCAAATTCTACATCGATG+TGG 0.703743 7_2:+13355348 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAATTTCTTTATTTATTTT+AGG - chr7_2:13352853-13352872 Msa1049820:intron 10.0%
!!! GTAAATATATATTTTTTGTA+AGG - chr7_2:13353337-13353356 Msa1049820:intron 10.0%
!! AAAGCTATTAAAATTAATTA+AGG - chr7_2:13353366-13353385 Msa1049820:intron 10.0%
!! TTTAAATAAGTAAATAACAA+TGG - chr7_2:13354127-13354146 Msa1049820:intron 10.0%
!!! TTTAGTAATTTTTTTTAGTA+TGG - chr7_2:13354306-13354325 Msa1049820:intron 10.0%
!! TTGTTTAAGTATATTATTTA+AGG - chr7_2:13354341-13354360 Msa1049820:intron 10.0%
!! AATAAATGACTAATAAAATA+TGG + chr7_2:13354494-13354513 None:intergenic 10.0%
!! TAAAAAAAAAAACTTTATGT+TGG - chr7_2:13354745-13354764 Msa1049820:intron 10.0%
!! TATTTCCTATATATAATATA+GGG + chr7_2:13354801-13354820 None:intergenic 10.0%
!! TTATTTCCTATATATAATAT+AGG + chr7_2:13354802-13354821 None:intergenic 10.0%
!!! TTTAAAGTTTATTTACAATT+TGG - chr7_2:13355208-13355227 Msa1049820:CDS 10.0%
!! TTAAAGTTTATTTACAATTT+GGG - chr7_2:13355209-13355228 Msa1049820:CDS 10.0%
!!! TTTAAAATATTGTTTATTGA+TGG + chr7_2:13355859-13355878 None:intergenic 10.0%
!!! ATTAATAGATTTGTTATTTA+AGG - chr7_2:13355892-13355911 Msa1049820:intron 10.0%
!! AATAAAAAGAAAAGTAATAT+TGG + chr7_2:13356574-13356593 None:intergenic 10.0%
!!! ATGAAAAAGGTATTAAAAAA+TGG + chr7_2:13352721-13352740 None:intergenic 15.0%
!!! ACCTTTTTCATTTTAATTTT+TGG - chr7_2:13352730-13352749 Msa1049820:intron 15.0%
!! TCCAAAAATTAAAATGAAAA+AGG + chr7_2:13352734-13352753 None:intergenic 15.0%
!! GTGTCAAAAAAAATAAATTA+AGG + chr7_2:13352807-13352826 None:intergenic 15.0%
!!! TTTCTTTATTTATTTTAGGA+AGG - chr7_2:13352857-13352876 Msa1049820:intron 15.0%
!!! TTCTTTATTTATTTTAGGAA+GGG - chr7_2:13352858-13352877 Msa1049820:intron 15.0%
!! ATCTCTACTAAATTTAAATT+TGG - chr7_2:13353015-13353034 Msa1049820:CDS 15.0%
!!! TAAGTTTTTGAACAATTTTT+TGG - chr7_2:13353057-13353076 Msa1049820:CDS 15.0%
!!! ATTTTGAGATAATTTTTGTA+CGG + chr7_2:13353114-13353133 None:intergenic 15.0%
!! TTTCTTAAATACATTGTTTA+AGG - chr7_2:13354280-13354299 Msa1049820:intron 15.0%
!!! GAATAGAAAAGTTAAATTTT+AGG + chr7_2:13354648-13354667 None:intergenic 15.0%
!! TTTCTTTATATAAAAGAAGT+TGG + chr7_2:13355497-13355516 None:intergenic 15.0%
!!! AACTTTAAAAGAATATAACA+TGG + chr7_2:13355582-13355601 None:intergenic 15.0%
!!! TGATGGATATTTTTTTTTTT+AGG + chr7_2:13355842-13355861 None:intergenic 15.0%
!! ACTAAACTTGAAAATAATAA+GGG - chr7_2:13355915-13355934 Msa1049820:intron 15.0%
!! AGAAATCTACAAAAATAAAT+CGG + chr7_2:13356600-13356619 None:intergenic 15.0%
!!! TAAATTTTCGTTTATACATA+TGG - chr7_2:13357044-13357063 Msa1049820:intron 15.0%
!!! AATCTTTATTTTTGAATGTA+CGG - chr7_2:13358287-13358306 Msa1049820:intron 15.0%
!! TGTTAAACAAAAAAAGAAAA+GGG + chr7_2:13358512-13358531 None:intergenic 15.0%
!! ATGTTAAACAAAAAAAGAAA+AGG + chr7_2:13358513-13358532 None:intergenic 15.0%
!! TATTAAAGAAAAAGATCAAA+CGG + chr7_2:13358727-13358746 None:intergenic 15.0%
!! ACAAACTTATATTGTATAAT+CGG + chr7_2:13358867-13358886 None:intergenic 15.0%
!! ACAAAATTATCAACAACAAA+TGG + chr7_2:13352764-13352783 None:intergenic 20.0%
!! AGATAAAAGCAACAAAAAAT+TGG + chr7_2:13353150-13353169 None:intergenic 20.0%
!!! TAAGTTTAGAACATTTCAAA+AGG + chr7_2:13353247-13353266 None:intergenic 20.0%
!!! AAACAAACTTTATTTTAGCA+TGG - chr7_2:13353301-13353320 Msa1049820:intron 20.0%
!! TTATAAGTTTCCAATTCTAT+AGG - chr7_2:13353396-13353415 Msa1049820:intron 20.0%
!! TATAAGTTTCCAATTCTATA+GGG - chr7_2:13353397-13353416 Msa1049820:intron 20.0%
!!! AAAAGGGTTAAATATGTTTT+TGG + chr7_2:13353424-13353443 None:intergenic 20.0%
!!! AAAACATATTTAACCCTTTT+AGG - chr7_2:13353424-13353443 Msa1049820:intron 20.0%
!!! CTATTTTATCTCAACAAAAA+CGG + chr7_2:13354830-13354849 None:intergenic 20.0%
!!! GTTTTTGTTGAGATAAAATA+GGG - chr7_2:13354829-13354848 Msa1049820:intron 20.0%
!! GACTAAACTTGAAAATAATA+AGG - chr7_2:13355914-13355933 Msa1049820:intron 20.0%
!!! AACAAACAAAAAAAGTACAT+TGG - chr7_2:13356212-13356231 Msa1049820:intron 20.0%
!!! ACAAACAAAAAAAGTACATT+GGG - chr7_2:13356213-13356232 Msa1049820:intron 20.0%
!! AAATAGTTCAAGATTTGATT+TGG + chr7_2:13356271-13356290 None:intergenic 20.0%
!!! AACAAACAAAAAAAGTACAT+TGG - chr7_2:13356212-13356231 Msa1049820:intron 20.0%
!!! ACAAACAAAAAAAGTACATT+GGG - chr7_2:13356213-13356232 Msa1049820:intron 20.0%
!! CCTATATATAAGCTAAAAAA+AGG + chr7_2:13356451-13356470 None:intergenic 20.0%
!!! CCTTTTTTTAGCTTATATAT+AGG - chr7_2:13356448-13356467 Msa1049820:intron 20.0%
!!! ACTCGTATATTTTTCATAAA+AGG - chr7_2:13357097-13357116 Msa1049820:intron 20.0%
!! AGTGTGATTATAATAATAGT+TGG + chr7_2:13357188-13357207 None:intergenic 20.0%
!! ATAGCTCACTATATTTATTT+AGG - chr7_2:13357523-13357542 Msa1049820:intron 20.0%
!!! GTTTCTCTTATAGTTTTTAT+TGG + chr7_2:13358125-13358144 None:intergenic 20.0%
!! AAACTATTAAGATTGATCTA+GGG - chr7_2:13358141-13358160 Msa1049820:intron 20.0%
!! TAATGAGTTAGATAGAAATA+TGG - chr7_2:13358166-13358185 Msa1049820:intron 20.0%
!! TTTCTTTAATATTGTAACTG+TGG - chr7_2:13358736-13358755 Msa1049820:intron 20.0%
!! TTGATAAATGAAACATAGTT+AGG + chr7_2:13358837-13358856 None:intergenic 20.0%
!! TATGTTTCATTTATCAAATC+CGG - chr7_2:13358840-13358859 Msa1049820:intron 20.0%
!!! TGTGTAAATTTTCAAAACAA+GGG - chr7_2:13359184-13359203 Msa1049820:intron 20.0%
!! NNNNNNNNATGGATCAAAGA+AGG - chr7_2:13359441-13359460 Msa1049820:CDS 20.0%
!!! TGTGTTTTTTTTAGTTTTGT+TGG - chr7_2:13359527-13359546 Msa1049820:exon 20.0%
!! TAGGAATTGGTTTCAAAAAA+AGG + chr7_2:13352690-13352709 None:intergenic 25.0%
! TTAAAAAATGGTTACCTCAT+AGG + chr7_2:13352709-13352728 None:intergenic 25.0%
!!! CTGAGTGCATAATTTTTTTA+AGG + chr7_2:13352990-13353009 None:intergenic 25.0%
!! GAAATGTTCTAAACTTATCT+CGG - chr7_2:13353250-13353269 Msa1049820:intron 25.0%
! GCTTGTTTGACATAAATAAA+AGG + chr7_2:13353938-13353957 None:intergenic 25.0%
! ATCGTACAAAAATATGAAGA+AGG - chr7_2:13353960-13353979 Msa1049820:intron 25.0%
! CAGAACCCTATATTATATAT+AGG - chr7_2:13354793-13354812 Msa1049820:intron 25.0%
!! CGTTTTTGTTGAGATAAAAT+AGG - chr7_2:13354828-13354847 Msa1049820:intron 25.0%
!! ATTTAAAGCAAAGCTTTGTA+TGG + chr7_2:13355018-13355037 None:intergenic 25.0%
! AGTTTATTTACAATTTGGGT+TGG - chr7_2:13355213-13355232 Msa1049820:CDS 25.0%
!!! TTCTTTTAAAGTTTTCGATG+TGG - chr7_2:13355589-13355608 Msa1049820:intron 25.0%
!!! TCTTTTAAAGTTTTCGATGT+GGG - chr7_2:13355590-13355609 Msa1049820:intron 25.0%
!! ATAATGGAATAAAATGGTGT+TGG + chr7_2:13355762-13355781 None:intergenic 25.0%
!!! TATTTAACGAGCTTAGTTTT+CGG - chr7_2:13356075-13356094 Msa1049820:intron 25.0%
! AAATAGTTCAAGATTCGATT+TGG + chr7_2:13356137-13356156 None:intergenic 25.0%
!!! ATCTTGAACTATTTTTGAGT+TGG - chr7_2:13356143-13356162 Msa1049820:intron 25.0%
!!! ATCTTGAACTATTTTTGAGT+TGG - chr7_2:13356143-13356162 Msa1049820:intron 25.0%
!! GCAGTGAAATAATAACATTT+TGG - chr7_2:13356399-13356418 Msa1049820:intron 25.0%
! GTAGATTTCTGTGAAAATAT+TGG - chr7_2:13356610-13356629 Msa1049820:intron 25.0%
! AAAGATAATAACACTTGACT+AGG + chr7_2:13356637-13356656 None:intergenic 25.0%
! TACATCCTGTAAACAATAAA+GGG + chr7_2:13356686-13356705 None:intergenic 25.0%
! TTACATCCTGTAAACAATAA+AGG + chr7_2:13356687-13356706 None:intergenic 25.0%
! AAAACTTGGTAGAAGAAATT+AGG - chr7_2:13357480-13357499 Msa1049820:intron 25.0%
!! ATAGTTTCTTTTGCTGAAAA+GGG - chr7_2:13357785-13357804 Msa1049820:intron 25.0%
!! AAGGCACAATATAATTTGTA+TGG - chr7_2:13357864-13357883 Msa1049820:intron 25.0%
!! AGGCACAATATAATTTGTAT+GGG - chr7_2:13357865-13357884 Msa1049820:intron 25.0%
! GAAACTATTAAGATTGATCT+AGG - chr7_2:13358140-13358159 Msa1049820:intron 25.0%
! TGGTATATGATAGAACATTA+TGG - chr7_2:13358186-13358205 Msa1049820:intron 25.0%
! TAATCAATAATCCAATCTCA+AGG + chr7_2:13358325-13358344 None:intergenic 25.0%
!! GGATTATTGATTACCTTAAA+AGG - chr7_2:13358332-13358351 Msa1049820:intron 25.0%
! GTAGGAATATTAAGAGAATA+TGG - chr7_2:13358622-13358641 Msa1049820:intron 25.0%
! AATAGACCCAACATATAATA+AGG - chr7_2:13358798-13358817 Msa1049820:intron 25.0%
! ATAGACCCAACATATAATAA+GGG - chr7_2:13358799-13358818 Msa1049820:intron 25.0%
! GAACAGAAAAATATTAGTGA+TGG + chr7_2:13358962-13358981 None:intergenic 25.0%
! TACTTCATCGATGAATATAA+TGG + chr7_2:13359029-13359048 None:intergenic 25.0%
! ACTACTTAAAAACTTACGAT+CGG + chr7_2:13359143-13359162 None:intergenic 25.0%
!! CTGTGTAAATTTTCAAAACA+AGG - chr7_2:13359183-13359202 Msa1049820:intron 25.0%
!!! TTTTGAAACCAATTCCTATG+AGG - chr7_2:13352692-13352711 Msa1049820:intron 30.0%
! TTGAGATAATTTTTGTACGG+AGG + chr7_2:13353111-13353130 None:intergenic 30.0%
ACATATGCTCATTCCTAAAA+GGG + chr7_2:13353440-13353459 None:intergenic 30.0%
!! TTTTAGGAATGAGCATATGT+CGG - chr7_2:13353440-13353459 Msa1049820:intron 30.0%
!!! TTCAGTTTTCATTGGTTTGA+CGG + chr7_2:13353480-13353499 None:intergenic 30.0%
TTTGCTCTGTTGTAAAATCT+TGG - chr7_2:13353783-13353802 Msa1049820:intron 30.0%
!! TTCATTTTGACCGTGAAAAA+AGG + chr7_2:13353840-13353859 None:intergenic 30.0%
TGAAAGATTGATTAGAGATC+TGG - chr7_2:13353876-13353895 Msa1049820:intron 30.0%
GAAAGATTGATTAGAGATCT+GGG - chr7_2:13353877-13353896 Msa1049820:intron 30.0%
AATCAGATCTGAAAAAAGTG+TGG - chr7_2:13353984-13354003 Msa1049820:intron 30.0%
TAGTGTATTCTTGATTGGAT+TGG - chr7_2:13354064-13354083 Msa1049820:intron 30.0%
AGTGTATTCTTGATTGGATT+GGG - chr7_2:13354065-13354084 Msa1049820:intron 30.0%
TGTAAGCTAATGTCATTGTT+GGG + chr7_2:13354104-13354123 None:intergenic 30.0%
ATATAATATAGGGTTCTGCA+TGG + chr7_2:13354791-13354810 None:intergenic 30.0%
ACAAAAAACACCAATACACT+AGG - chr7_2:13355463-13355482 Msa1049820:intron 30.0%
! AGAAATTAATGAGAGAGCAT+TGG - chr7_2:13355512-13355531 Msa1049820:intron 30.0%
TTGTATGATAGATTAGCAAG+CGG + chr7_2:13355677-13355696 None:intergenic 30.0%
ATGAAATTGCTCTATTTGGT+AGG + chr7_2:13355735-13355754 None:intergenic 30.0%
TGAGATGAAATTGCTCTATT+TGG + chr7_2:13355739-13355758 None:intergenic 30.0%
! GGAGGAATAATGGAATAAAA+TGG + chr7_2:13355768-13355787 None:intergenic 30.0%
ATATGCTATATGTTGCATGA+TGG - chr7_2:13355956-13355975 Msa1049820:intron 30.0%
TATGTGTAGTTTGACTCATT+TGG + chr7_2:13356037-13356056 None:intergenic 30.0%
GGTAATTAATTCGTTGAACT+TGG + chr7_2:13356116-13356135 None:intergenic 30.0%
!!! GAACTATTTTTGAGTTGGAT+TGG - chr7_2:13356148-13356167 Msa1049820:intron 30.0%
GGTAATTAATTCGTTGAACT+TGG + chr7_2:13356116-13356135 None:intergenic 30.0%
!!! GAACTATTTTTGAGTTGGAT+TGG - chr7_2:13356148-13356167 Msa1049820:intron 30.0%
ATAGCCTTTAAATACCAGTA+CGG + chr7_2:13356482-13356501 None:intergenic 30.0%
TTGTTTACAGGATGTAATAG+CGG - chr7_2:13356690-13356709 Msa1049820:intron 30.0%
GATGTAGAATTTGACTCTAT+TGG - chr7_2:13356739-13356758 Msa1049820:intron 30.0%
CACATAATTCGTGTAATCAA+TGG - chr7_2:13357258-13357277 Msa1049820:intron 30.0%
GTATTATTAGTACTACGAAC+CGG - chr7_2:13357545-13357564 Msa1049820:intron 30.0%
TTCAGCAAAAGAAACTATGT+TGG + chr7_2:13357783-13357802 None:intergenic 30.0%
! CATAGTTTCTTTTGCTGAAA+AGG - chr7_2:13357784-13357803 Msa1049820:intron 30.0%
! GATTTGATGATTATGTAGCA+AGG - chr7_2:13358051-13358070 Msa1049820:intron 30.0%
! AAACTAATTTGCCTTGAGAT+TGG - chr7_2:13358311-13358330 Msa1049820:intron 30.0%
AGAGGTTTACAAGCATAAAT+AGG + chr7_2:13358441-13358460 None:intergenic 30.0%
!! GGTTTGTTGGTTAATTAAAG+AGG + chr7_2:13358459-13358478 None:intergenic 30.0%
TCTCTTAATGTTAGGTTTGT+TGG + chr7_2:13358472-13358491 None:intergenic 30.0%
ATTATGATGTACGTTACTGT+AGG - chr7_2:13358604-13358623 Msa1049820:intron 30.0%
TTCTTCAAATTCCATTTGCT+TGG - chr7_2:13358654-13358673 Msa1049820:intron 30.0%
TTCTACTATATCCTTTGCTT+TGG + chr7_2:13358700-13358719 None:intergenic 30.0%
CTTATATTGTATAATCGGTC+CGG + chr7_2:13358862-13358881 None:intergenic 30.0%
! AATATTTTTCTGTTCTGCAG+TGG - chr7_2:13358967-13358986 Msa1049820:intron 30.0%
TTTATGAGCCAAGCTAAATA+CGG + chr7_2:13358996-13359015 None:intergenic 30.0%
! TCATCGATGAATATAATGGA+TGG + chr7_2:13359025-13359044 None:intergenic 30.0%
!!! GATGAAGTAGACAGTTTTTT+GGG - chr7_2:13359040-13359059 Msa1049820:intron 30.0%
AACTTGATGAAGCAATACTT+CGG - chr7_2:13359315-13359334 Msa1049820:intron 30.0%
TTGTTCCTTCTTTCGTTCAA+AGG - chr7_2:13352542-13352561 Msa1049820:CDS 35.0%
TTCTTTCGTTCAAAGGACAT+GGG - chr7_2:13352549-13352568 Msa1049820:intron 35.0%
AAAGAGATTGCTAAACGTCT+TGG - chr7_2:13352660-13352679 Msa1049820:intron 35.0%
AATGGTTACCTCATAGGAAT+TGG + chr7_2:13352703-13352722 None:intergenic 35.0%
!!! GTTTTTGGTCCCTATAGAAT+TGG + chr7_2:13353409-13353428 None:intergenic 35.0%
GACATATGCTCATTCCTAAA+AGG + chr7_2:13353441-13353460 None:intergenic 35.0%
GTAATTAGGCCTAGAATTAG+TGG + chr7_2:13353511-13353530 None:intergenic 35.0%
ACGGTCAAAATGAAGAAGAA+GGG - chr7_2:13353846-13353865 Msa1049820:intron 35.0%
! AGATCTGAAATGAGACAGTA+GGG - chr7_2:13354034-13354053 Msa1049820:intron 35.0%
! AGGGTTAGTGTATTCTTGAT+TGG - chr7_2:13354059-13354078 Msa1049820:intron 35.0%
CTGTAAGCTAATGTCATTGT+TGG + chr7_2:13354105-13354124 None:intergenic 35.0%
AAGTTGCATAGAGCAACAAA+AGG - chr7_2:13354691-13354710 Msa1049820:intron 35.0%
!!! TTGGTTTTGAGACAAGTTGT+AGG - chr7_2:13354764-13354783 Msa1049820:intron 35.0%
AGCATTAAAGCAGCCATTTA+AGG - chr7_2:13354860-13354879 Msa1049820:intron 35.0%
TGGACTAACCCCATAAAAAT+TGG + chr7_2:13354998-13355017 None:intergenic 35.0%
ATTAGTCGTTCCTTATGCAT+AGG - chr7_2:13355075-13355094 Msa1049820:intron 35.0%
TTAGTCGTTCCTTATGCATA+GGG - chr7_2:13355076-13355095 Msa1049820:intron 35.0%
ATCTCATAACTAGAGCAACT+CGG - chr7_2:13355263-13355282 Msa1049820:CDS 35.0%
TGAATTTGAGTCAAGCTTCT+AGG + chr7_2:13355308-13355327 None:intergenic 35.0%
GCAGATTTCATAACACACTT+TGG + chr7_2:13355625-13355644 None:intergenic 35.0%
! GCGGATACAATTTTCTTGAA+GGG + chr7_2:13355658-13355677 None:intergenic 35.0%
! AGCGGATACAATTTTCTTGA+AGG + chr7_2:13355659-13355678 None:intergenic 35.0%
! TTTGTAGTTTCAGGTGTGAA+GGG + chr7_2:13355789-13355808 None:intergenic 35.0%
!! TTTTGTAGTTTCAGGTGTGA+AGG + chr7_2:13355790-13355809 None:intergenic 35.0%
!!! TGTGTCGATTTTGTAGTTTC+AGG + chr7_2:13355798-13355817 None:intergenic 35.0%
! ATTATTAACGAGCTGACTCA+TGG - chr7_2:13356010-13356029 Msa1049820:intron 35.0%
AGTACATTGGGTAGTTAAGA+AGG - chr7_2:13356359-13356378 Msa1049820:intron 35.0%
TTAAATACCAGTACGGAACA+TGG + chr7_2:13356475-13356494 None:intergenic 35.0%
! TGTTCCGTACTGGTATTTAA+AGG - chr7_2:13356475-13356494 Msa1049820:intron 35.0%
GGAGATAAGTTAGCATAGAA+TGG + chr7_2:13356553-13356572 None:intergenic 35.0%
AGTCAAATTCTACATCGATG+TGG + chr7_2:13356735-13356754 None:intergenic 35.0%
GTAGAATTTGACTCTATTGG+TGG - chr7_2:13356742-13356761 Msa1049820:intron 35.0%
AAACTTCTTGGACCACAAAA+GGG - chr7_2:13356841-13356860 Msa1049820:intron 35.0%
CACATTAATGAAAACTGCTC+CGG + chr7_2:13356932-13356951 None:intergenic 35.0%
TATCAAACCTGATGAGCAAA+TGG - chr7_2:13356956-13356975 Msa1049820:intron 35.0%
! TACACACTTACCAAGCTTTT+GGG + chr7_2:13356992-13357011 None:intergenic 35.0%
TATGCGAGTGTATAAAAGCT+TGG - chr7_2:13357158-13357177 Msa1049820:intron 35.0%
ATCAATGGAGAATTGCGAAT+TGG - chr7_2:13357273-13357292 Msa1049820:intron 35.0%
TAATCATGCTTTGGTACTCT+TGG + chr7_2:13357354-13357373 None:intergenic 35.0%
!!! CCTTTTTTTCAACCAATCAG+CGG + chr7_2:13357377-13357396 None:intergenic 35.0%
AAATGAATCACCATGAGTTG+AGG - chr7_2:13357419-13357438 Msa1049820:intron 35.0%
AGAAGAACATGAACAAAGAG+TGG - chr7_2:13357450-13357469 Msa1049820:intron 35.0%
AGAAGAATTCGGTACGTATA+GGG + chr7_2:13357591-13357610 None:intergenic 35.0%
AAGAAGAATTCGGTACGTAT+AGG + chr7_2:13357592-13357611 None:intergenic 35.0%
AACCATAGTCACATAATTCG+CGG + chr7_2:13357661-13357680 None:intergenic 35.0%
AAAGAAACTATGTTGGTCGT+TGG + chr7_2:13357776-13357795 None:intergenic 35.0%
TATATTGTGCCTTTACCACT+GGG + chr7_2:13357857-13357876 None:intergenic 35.0%
TTATATTGTGCCTTTACCAC+TGG + chr7_2:13357858-13357877 None:intergenic 35.0%
AATCAAGCATAGCAGAGATA+AGG - chr7_2:13357925-13357944 Msa1049820:intron 35.0%
! AAGCTTTATCACAGTATGTG+GGG + chr7_2:13358235-13358254 None:intergenic 35.0%
! CAAGCTTTATCACAGTATGT+GGG + chr7_2:13358236-13358255 None:intergenic 35.0%
ACAAGCATAAATAGGACACA+GGG + chr7_2:13358433-13358452 None:intergenic 35.0%
TACAAGCATAAATAGGACAC+AGG + chr7_2:13358434-13358453 None:intergenic 35.0%
GCTGTCATTCTCTTAATGTT+AGG + chr7_2:13358480-13358499 None:intergenic 35.0%
ATTGTAACTGTGGCCAATTT+CGG - chr7_2:13358746-13358765 Msa1049820:intron 35.0%
! TATGTTGGGTCTATTTCTCT+CGG + chr7_2:13358793-13358812 None:intergenic 35.0%
GGTTGCCCTTATTATATGTT+GGG + chr7_2:13358807-13358826 None:intergenic 35.0%
AGGTTGCCCTTATTATATGT+TGG + chr7_2:13358808-13358827 None:intergenic 35.0%
AACATATAATAAGGGCAACC+TGG - chr7_2:13358807-13358826 Msa1049820:intron 35.0%
!!! TTCTGTTGCTTTTTTCAGCT+TGG - chr7_2:13358922-13358941 Msa1049820:intron 35.0%
!!! CGATGAAGTAGACAGTTTTT+TGG - chr7_2:13359039-13359058 Msa1049820:intron 35.0%
ACAGATGAAAACTGAGTTCA+TGG - chr7_2:13359096-13359115 Msa1049820:intron 35.0%
ACTTAAAAACTTACGATCGG+TGG + chr7_2:13359140-13359159 None:intergenic 35.0%
!! TTGCTTCATCAAGTTCTGAA+GGG + chr7_2:13359310-13359329 None:intergenic 35.0%
! ATTGCTTCATCAAGTTCTGA+AGG + chr7_2:13359311-13359330 None:intergenic 35.0%
CATGTCCTTTGAACGAAAGA+AGG + chr7_2:13352550-13352569 None:intergenic 40.0%
CTTCTTTCGTTCAAAGGACA+TGG - chr7_2:13352548-13352567 Msa1049820:intron 40.0%
ATGATTCACGGTTCAGGTAA+CGG + chr7_2:13352629-13352648 None:intergenic 40.0%
TTACCTGAACCGTGAATCAT+CGG - chr7_2:13352629-13352648 Msa1049820:intron 40.0%
!! GAATGAGCATATGTCGGTTT+GGG - chr7_2:13353446-13353465 Msa1049820:intron 40.0%
! CGGCAGTTTTCAGTTTTCAT+TGG + chr7_2:13353488-13353507 None:intergenic 40.0%
ATTAGGCCTAGAATTAGTGG+CGG + chr7_2:13353508-13353527 None:intergenic 40.0%
CATATCTCTGTTGTCAAACG+CGG - chr7_2:13353603-13353622 Msa1049820:intron 40.0%
!!! TCTTCGTCGTCCTTTTTTCA+CGG - chr7_2:13353827-13353846 Msa1049820:intron 40.0%
CACGGTCAAAATGAAGAAGA+AGG - chr7_2:13353845-13353864 Msa1049820:intron 40.0%
CGGTCAAAATGAAGAAGAAG+GGG - chr7_2:13353847-13353866 Msa1049820:intron 40.0%
! CAGATCTGAAAAAAGTGTGG+CGG - chr7_2:13353987-13354006 Msa1049820:intron 40.0%
! CAGATCTGAAATGAGACAGT+AGG - chr7_2:13354033-13354052 Msa1049820:intron 40.0%
TGAAATGAGACAGTAGGGTT+AGG - chr7_2:13354039-13354058 Msa1049820:intron 40.0%
GAAATGAGACAGTAGGGTTA+GGG - chr7_2:13354040-13354059 Msa1049820:intron 40.0%
! TCTTGATTGGATTGGGTCAT+TGG - chr7_2:13354072-13354091 Msa1049820:intron 40.0%
! CTTGATTGGATTGGGTCATT+GGG - chr7_2:13354073-13354092 Msa1049820:intron 40.0%
! ATGTAGCTCTGTTGTCAAAG+CGG + chr7_2:13354613-13354632 None:intergenic 40.0%
AACCCCATAAAAATTGGCAC+CGG + chr7_2:13354992-13355011 None:intergenic 40.0%
CTTTAAATGACCCTCTGCTA+GGG - chr7_2:13355030-13355049 Msa1049820:intron 40.0%
TTTAAATGACCCTCTGCTAG+GGG - chr7_2:13355031-13355050 Msa1049820:intron 40.0%
ATAAGGAACGACTAATCCAG+GGG + chr7_2:13355071-13355090 None:intergenic 40.0%
CATAAGGAACGACTAATCCA+GGG + chr7_2:13355072-13355091 None:intergenic 40.0%
TCATTTCAGCCCTATGCATA+AGG + chr7_2:13355088-13355107 None:intergenic 40.0%
! CGACTTGATAAGGATTTGCT+TGG - chr7_2:13355129-13355148 Msa1049820:CDS 40.0%
! GATTTGCTTGGCTTGAAACT+CGG - chr7_2:13355141-13355160 Msa1049820:CDS 40.0%
!! ACAATTTGGGTTGGCTTGTT+AGG - chr7_2:13355222-13355241 Msa1049820:CDS 40.0%
CTCGATGTCTAGTCTAAGTA+GGG + chr7_2:13356185-13356204 None:intergenic 40.0%
ACTCGATGTCTAGTCTAAGT+AGG + chr7_2:13356186-13356205 None:intergenic 40.0%
CTCGATGTCTAGTCTAAGTA+GGG + chr7_2:13356185-13356204 None:intergenic 40.0%
ACTCGATGTCTAGTCTAAGT+AGG + chr7_2:13356186-13356205 None:intergenic 40.0%
AAGCATGAAACCATCCTATG+CGG - chr7_2:13356505-13356524 Msa1049820:intron 40.0%
TTGCGCCCTTTATTGTTTAC+AGG - chr7_2:13356678-13356697 Msa1049820:intron 40.0%
AATTCTACATCGATGTGGTC+AGG + chr7_2:13356730-13356749 None:intergenic 40.0%
! TTTTCGCATGGCAAACTTCT+TGG - chr7_2:13356829-13356848 Msa1049820:intron 40.0%
CAAACTTCTTGGACCACAAA+AGG - chr7_2:13356840-13356859 Msa1049820:intron 40.0%
AACTTCTTGGACCACAAAAG+GGG - chr7_2:13356842-13356861 Msa1049820:intron 40.0%
AACCTGATGAGCAAATGGTT+CGG - chr7_2:13356961-13356980 Msa1049820:intron 40.0%
! CTACACACTTACCAAGCTTT+TGG + chr7_2:13356993-13357012 None:intergenic 40.0%
! AGTACCGAATTCAGGTACTT+CGG - chr7_2:13357302-13357321 Msa1049820:intron 40.0%
AATCAGCGGTAATCATGCTT+TGG + chr7_2:13357363-13357382 None:intergenic 40.0%
AAAGCATGATTACCGCTGAT+TGG - chr7_2:13357362-13357381 Msa1049820:intron 40.0%
! CCGCTGATTGGTTGAAAAAA+AGG - chr7_2:13357374-13357393 Msa1049820:intron 40.0%
AGAGTGGAGAGTGAAAAACT+TGG - chr7_2:13357466-13357485 Msa1049820:intron 40.0%
GAAGAATTCGGTACGTATAG+GGG + chr7_2:13357590-13357609 None:intergenic 40.0%
TACGCGACAGAAGAAGAATT+CGG + chr7_2:13357602-13357621 None:intergenic 40.0%
AACCGCGAATTATGTGACTA+TGG - chr7_2:13357656-13357675 Msa1049820:intron 40.0%
CTTGTTTCACTCACTGTTAC+CGG - chr7_2:13357686-13357705 Msa1049820:intron 40.0%
TGGTATCACTTGCAGTTGTA+AGG - chr7_2:13357709-13357728 Msa1049820:intron 40.0%
TCAAATACCATTTAGCCCAG+TGG - chr7_2:13357839-13357858 Msa1049820:intron 40.0%
ATTTGTATGGGACGAAGTGT+TGG - chr7_2:13357877-13357896 Msa1049820:intron 40.0%
! TTTGTATGGGACGAAGTGTT+GGG - chr7_2:13357878-13357897 Msa1049820:intron 40.0%
AGAGATAAGGATGTTGTGCT+TGG - chr7_2:13357938-13357957 Msa1049820:intron 40.0%
GAGATAAGGATGTTGTGCTT+GGG - chr7_2:13357939-13357958 Msa1049820:intron 40.0%
GTACTCATAGTAGGAGAGTT+GGG - chr7_2:13357964-13357983 Msa1049820:intron 40.0%
TACTCATAGTAGGAGAGTTG+GGG - chr7_2:13357965-13357984 Msa1049820:intron 40.0%
TAGAAAAGAGGGTGGAAACT+AGG - chr7_2:13358000-13358019 Msa1049820:intron 40.0%
TAGCAAGGAGATTAGATCAG+AGG - chr7_2:13358066-13358085 Msa1049820:intron 40.0%
AGCAAGGAGATTAGATCAGA+GGG - chr7_2:13358067-13358086 Msa1049820:intron 40.0%
GAGGATAATCACATCCCTAA+AGG - chr7_2:13358089-13358108 Msa1049820:intron 40.0%
TTTATCACAGTATGTGGGGT+CGG + chr7_2:13358231-13358250 None:intergenic 40.0%
! CCAAGCTTTATCACAGTATG+TGG + chr7_2:13358237-13358256 None:intergenic 40.0%
CCACATACTGTGATAAAGCT+TGG - chr7_2:13358234-13358253 Msa1049820:intron 40.0%
AAAATCCTGAGGAGAGTCTT+TGG + chr7_2:13358358-13358377 None:intergenic 40.0%
GCAGAACAGAAAAAATCCTG+AGG + chr7_2:13358369-13358388 None:intergenic 40.0%
CAAGCATAAATAGGACACAG+GGG + chr7_2:13358432-13358451 None:intergenic 40.0%
!!! TCCAGCTTTTAGAGCTTTGA+GGG + chr7_2:13358562-13358581 None:intergenic 40.0%
!!! TTCCAGCTTTTAGAGCTTTG+AGG + chr7_2:13358563-13358582 None:intergenic 40.0%
!! TTGCTTTGGAAATACACAGC+AGG + chr7_2:13358686-13358705 None:intergenic 40.0%
GCTGTGTATTTCCAAAGCAA+AGG - chr7_2:13358686-13358705 Msa1049820:intron 40.0%
CTAATGAGCCAAACCGAAAT+TGG + chr7_2:13358762-13358781 None:intergenic 40.0%
GAAACATAGTTAGGTATGCC+AGG + chr7_2:13358828-13358847 None:intergenic 40.0%
! TTCAGCTTGGTTCTCTGTTT+AGG - chr7_2:13358935-13358954 Msa1049820:intron 40.0%
! AAACTGAGTTCATGGCTCTA+TGG - chr7_2:13359104-13359123 Msa1049820:intron 40.0%
! AACTGAGTTCATGGCTCTAT+GGG - chr7_2:13359105-13359124 Msa1049820:intron 40.0%
GATCAAAGAAGGAGAGAGAA+AGG - chr7_2:13359452-13359471 Msa1049820:CDS 40.0%
AAGGAGAGAGAAAGGAACAA+AGG - chr7_2:13359460-13359479 Msa1049820:CDS 40.0%
TAGCCTTCTCCGATGATTCA+CGG + chr7_2:13352641-13352660 None:intergenic 45.0%
! GGAATGAGCATATGTCGGTT+TGG - chr7_2:13353445-13353464 Msa1049820:intron 45.0%
AAACTGCCGCCACTAATTCT+AGG - chr7_2:13353499-13353518 Msa1049820:intron 45.0%
CTAGGCCTAATTACGACTTG+CGG - chr7_2:13353517-13353536 Msa1049820:intron 45.0%
TAGGCCTAATTACGACTTGC+GGG - chr7_2:13353518-13353537 Msa1049820:intron 45.0%
!! GTAGAATGGGTGGGTTGTTT+CGG - chr7_2:13353556-13353575 Msa1049820:intron 45.0%
!! TAGAATGGGTGGGTTGTTTC+GGG - chr7_2:13353557-13353576 Msa1049820:intron 45.0%
AAAGGACGACGAAGAGAGAA+CGG + chr7_2:13353822-13353841 None:intergenic 45.0%
CAGCCATTTAAGGACAAGCA+CGG - chr7_2:13354870-13354889 Msa1049820:intron 45.0%
AGCCATTTAAGGACAAGCAC+GGG - chr7_2:13354871-13354890 Msa1049820:intron 45.0%
TACCCGTGCTTGTCCTTAAA+TGG + chr7_2:13354876-13354895 None:intergenic 45.0%
ACAAGCACGGGTAAGTACAT+TGG - chr7_2:13354883-13354902 Msa1049820:intron 45.0%
CAAGCACGGGTAAGTACATT+GGG - chr7_2:13354884-13354903 Msa1049820:intron 45.0%
TTTGAACACGAGACCTTGAG+AGG + chr7_2:13354965-13354984 None:intergenic 45.0%
!! TCCTCCGGTGCCAATTTTTA+TGG - chr7_2:13354985-13355004 Msa1049820:intron 45.0%
!! CCTCCGGTGCCAATTTTTAT+GGG - chr7_2:13354986-13355005 Msa1049820:intron 45.0%
!! CTCCGGTGCCAATTTTTATG+GGG - chr7_2:13354987-13355006 Msa1049820:intron 45.0%
! GCTTTAAATGACCCTCTGCT+AGG - chr7_2:13355029-13355048 Msa1049820:intron 45.0%
GCATAAGGAACGACTAATCC+AGG + chr7_2:13355073-13355092 None:intergenic 45.0%
! TCGAAGAGCTCGACTTGATA+AGG - chr7_2:13355119-13355138 Msa1049820:CDS 45.0%
GGAGCTACAACCTAGTGTAT+TGG + chr7_2:13355476-13355495 None:intergenic 45.0%
AGGTGTGAAGGGAGGAATAA+TGG + chr7_2:13355778-13355797 None:intergenic 45.0%
ATGTCTAGTCTAAGTAGGGC+TGG + chr7_2:13356181-13356200 None:intergenic 45.0%
CGTAATCTTTGTGTGCGTGA+GGG - chr7_2:13356422-13356441 Msa1049820:intron 45.0%
GTAATCTTTGTGTGCGTGAG+GGG - chr7_2:13356423-13356442 Msa1049820:intron 45.0%
TATAGGACCATGTTCCGTAC+TGG - chr7_2:13356465-13356484 Msa1049820:intron 45.0%
GCATAGGATGGTTTCATGCT+TGG + chr7_2:13356506-13356525 None:intergenic 45.0%
AGCATGAAACCATCCTATGC+GGG - chr7_2:13356506-13356525 Msa1049820:intron 45.0%
AAACAAGTCTGGTCGTTGCA+GGG + chr7_2:13356812-13356831 None:intergenic 45.0%
AAAACAAGTCTGGTCGTTGC+AGG + chr7_2:13356813-13356832 None:intergenic 45.0%
TTGCCATGCGAAAACAAGTC+TGG + chr7_2:13356823-13356842 None:intergenic 45.0%
ACTTCTTGGACCACAAAAGG+GGG - chr7_2:13356843-13356862 Msa1049820:intron 45.0%
AAAGCTATTGCCAAGGAGTC+CGG - chr7_2:13356910-13356929 Msa1049820:intron 45.0%
ACCTGATGAGCAAATGGTTC+GGG - chr7_2:13356962-13356981 Msa1049820:intron 45.0%
! TACGCCGAAGTACCTGAATT+CGG + chr7_2:13357309-13357328 None:intergenic 45.0%
ATTCAGGTACTTCGGCGTAT+TGG - chr7_2:13357310-13357329 Msa1049820:intron 45.0%
! CGTATAGGGGTATACAGCTT+CGG + chr7_2:13357577-13357596 None:intergenic 45.0%
ACATAATTCGCGGTTCGTTC+CGG + chr7_2:13357651-13357670 None:intergenic 45.0%
ACAACTGCAAGTGATACCAC+CGG + chr7_2:13357708-13357727 None:intergenic 45.0%
ACCATTTAGCCCAGTGGTAA+AGG - chr7_2:13357845-13357864 Msa1049820:intron 45.0%
ATAAGGATGTTGTGCTTGGG+TGG - chr7_2:13357942-13357961 Msa1049820:intron 45.0%
GGTACTCATAGTAGGAGAGT+TGG - chr7_2:13357963-13357982 Msa1049820:intron 45.0%
TAGCACTCGCAGTAGAAAAG+AGG - chr7_2:13357988-13358007 Msa1049820:intron 45.0%
AGCACTCGCAGTAGAAAAGA+GGG - chr7_2:13357989-13358008 Msa1049820:intron 45.0%
AAGGAGATTAGATCAGAGGG+AGG - chr7_2:13358070-13358089 Msa1049820:intron 45.0%
AATCACATCCCTAAAGGCAG+AGG - chr7_2:13358095-13358114 Msa1049820:intron 45.0%
! TTGGTCTTCCTCTGCCTTTA+GGG + chr7_2:13358106-13358125 None:intergenic 45.0%
!! ATTGGTCTTCCTCTGCCTTT+AGG + chr7_2:13358107-13358126 None:intergenic 45.0%
!! GGAGAGTCTTTGGCCTTTTA+AGG + chr7_2:13358348-13358367 None:intergenic 45.0%
AAATAGGACACAGGGGAAGA+GGG + chr7_2:13358425-13358444 None:intergenic 45.0%
TAAATAGGACACAGGGGAAG+AGG + chr7_2:13358426-13358445 None:intergenic 45.0%
!!! TAGGTTGATTTTGAGGTGGC+TGG + chr7_2:13358538-13358557 None:intergenic 45.0%
!!! TGAGGGCTAGGTTGATTTTG+AGG + chr7_2:13358545-13358564 None:intergenic 45.0%
!!! CTTTTAGAGCTTTGAGGGCT+AGG + chr7_2:13358557-13358576 None:intergenic 45.0%
AACTGTGGCCAATTTCGGTT+TGG - chr7_2:13358751-13358770 Msa1049820:intron 45.0%
! GGTTTGGCTCATTAGCCATT+AGG - chr7_2:13358767-13358786 Msa1049820:intron 45.0%
! GTCTATTTCTCTCGGCCTAA+TGG + chr7_2:13358785-13358804 None:intergenic 45.0%
!! GTTGTTGTGTAGAGAGTGCT+CGG - chr7_2:13359258-13359277 Msa1049820:intron 45.0%
!! TTGTTGTGTAGAGAGTGCTC+GGG - chr7_2:13359259-13359278 Msa1049820:intron 45.0%
TCTCCGATGATTCACGGTTC+AGG + chr7_2:13352635-13352654 None:intergenic 50.0%
GAACCGTGAATCATCGGAGA+AGG - chr7_2:13352635-13352654 Msa1049820:intron 50.0%
CTTTCCACAAACGCGTGACT+TGG + chr7_2:13353690-13353709 None:intergenic 50.0%
AGTCACGCGTTTGTGGAAAG+CGG - chr7_2:13353690-13353709 Msa1049820:intron 50.0%
GTCGCGAATACGTTTCTGTG+AGG - chr7_2:13353726-13353745 Msa1049820:intron 50.0%
TACGTTTCTGTGAGGCAGAG+CGG - chr7_2:13353734-13353753 Msa1049820:intron 50.0%
! CAAAACGCGCTGCTTTGAAC+CGG + chr7_2:13353767-13353786 None:intergenic 50.0%
! TCTGAAAAAAGTGTGGCGGC+TGG - chr7_2:13353991-13354010 Msa1049820:intron 50.0%
! CTGAAAAAAGTGTGGCGGCT+GGG - chr7_2:13353992-13354011 Msa1049820:intron 50.0%
! TTGGATTGGGTCATTGGGCT+AGG - chr7_2:13354078-13354097 Msa1049820:intron 50.0%
! TACCGCACCGCGTCAATTTT+TGG - chr7_2:13354564-13354583 Msa1049820:intron 50.0%
! ACCGCACCGCGTCAATTTTT+GGG - chr7_2:13354565-13354584 Msa1049820:intron 50.0%
CTGTTGTCAAAGCGGAAACG+CGG + chr7_2:13354605-13354624 None:intergenic 50.0%
ACATTGGGTAGCAACCCACA+TGG - chr7_2:13354899-13354918 Msa1049820:intron 50.0%
CATTGGGTAGCAACCCACAT+GGG - chr7_2:13354900-13354919 Msa1049820:intron 50.0%
GGTCTCGTGTTCAAATCCTC+CGG - chr7_2:13354970-13354989 Msa1049820:intron 50.0%
! CCCATAAAAATTGGCACCGG+AGG + chr7_2:13354989-13355008 None:intergenic 50.0%
TTCCAATGTCCCCTAGCAGA+GGG + chr7_2:13355043-13355062 None:intergenic 50.0%
ATTCCAATGTCCCCTAGCAG+AGG + chr7_2:13355044-13355063 None:intergenic 50.0%
CTGCTAGGGGACATTGGAAT+TGG - chr7_2:13355044-13355063 Msa1049820:intron 50.0%
GCGCATGGTGGTATGAGATA+AGG + chr7_2:13355713-13355732 None:intergenic 50.0%
TCTATTTGGTAGGCGCATGG+TGG + chr7_2:13355725-13355744 None:intergenic 50.0%
TGCTCTATTTGGTAGGCGCA+TGG + chr7_2:13355728-13355747 None:intergenic 50.0%
! GTAGTTTCAGGTGTGAAGGG+AGG + chr7_2:13355786-13355805 None:intergenic 50.0%
!! CGAGCTTAGTTTTCGGCTCA+TGG - chr7_2:13356082-13356101 Msa1049820:intron 50.0%
GCGTAATCTTTGTGTGCGTG+AGG - chr7_2:13356421-13356440 Msa1049820:intron 50.0%
AACAAGTCTGGTCGTTGCAG+GGG + chr7_2:13356811-13356830 None:intergenic 50.0%
!! CGACCAGACTTGTTTTCGCA+TGG - chr7_2:13356817-13356836 Msa1049820:intron 50.0%
! TACAACAGGACCCCCTTTTG+TGG + chr7_2:13356856-13356875 None:intergenic 50.0%
CAAAAGGGGGTCCTGTTGTA+TGG - chr7_2:13356856-13356875 Msa1049820:intron 50.0%
! GGCAATAGCTTTTGCGAGCA+TGG + chr7_2:13356902-13356921 None:intergenic 50.0%
GCTCGCAAAAGCTATTGCCA+AGG - chr7_2:13356903-13356922 Msa1049820:intron 50.0%
CCTGATGAGCAAATGGTTCG+GGG - chr7_2:13356963-13356982 Msa1049820:intron 50.0%
!! GGTACGTGAGTACCGAATTC+AGG - chr7_2:13357294-13357313 Msa1049820:intron 50.0%
! CTTTGGTACTCTTGGTTCGC+TGG + chr7_2:13357346-13357365 None:intergenic 50.0%
CTCACTCAGTCCTCAACTCA+TGG + chr7_2:13357432-13357451 None:intergenic 50.0%
TATACAGCTTCGGTACGCTC+CGG + chr7_2:13357567-13357586 None:intergenic 50.0%
GTTTCACTCACTGTTACCGG+TGG - chr7_2:13357689-13357708 Msa1049820:intron 50.0%
GCCTTTACCACTGGGCTAAA+TGG + chr7_2:13357849-13357868 None:intergenic 50.0%
GCTTGGGTGGTACTCATAGT+AGG - chr7_2:13357955-13357974 Msa1049820:intron 50.0%
ACTCGCAGTAGAAAAGAGGG+TGG - chr7_2:13357992-13358011 Msa1049820:intron 50.0%
AGAGGGTGGAAACTAGGCTT+AGG - chr7_2:13358006-13358025 Msa1049820:intron 50.0%
AAAGGCCAAAGACTCTCCTC+AGG - chr7_2:13358350-13358369 Msa1049820:intron 50.0%
!!! GGGCTAGGTTGATTTTGAGG+TGG + chr7_2:13358542-13358561 None:intergenic 50.0%
!! GCCCTCAAAGCTCTAAAAGC+TGG - chr7_2:13358558-13358577 Msa1049820:intron 50.0%
GCAGGTCAAGACCAAGCAAA+TGG + chr7_2:13358668-13358687 None:intergenic 50.0%
AGTGGCTGCCGTATTTAGCT+TGG - chr7_2:13358985-13359004 Msa1049820:intron 50.0%
TTTGGGTCAGCGTCGTTCAT+CGG - chr7_2:13359057-13359076 Msa1049820:intron 50.0%
! GAGTTCATGGCTCTATGGGA+TGG - chr7_2:13359109-13359128 Msa1049820:intron 50.0%
!! TGTAGAGAGTGCTCGGGTTA+TGG - chr7_2:13359265-13359284 Msa1049820:intron 50.0%
GCTGTACTGCGCTTTGGTCA+CGG - chr7_2:13352599-13352618 Msa1049820:intron 55.0%
CTGTACTGCGCTTTGGTCAC+GGG - chr7_2:13352600-13352619 Msa1049820:intron 55.0%
CATTCTACCTGCCACCTGTG+CGG + chr7_2:13353544-13353563 None:intergenic 55.0%
GCACAGGTGGCAGGTAGAAT+GGG - chr7_2:13353543-13353562 Msa1049820:intron 55.0%
AGGTGGCAGGTAGAATGGGT+GGG - chr7_2:13353547-13353566 Msa1049820:intron 55.0%
TTGTCAAACGCGGCTGCTCT+CGG - chr7_2:13353613-13353632 Msa1049820:intron 55.0%
!!! GTGACGCGGCTCCTTGTTTT+TGG + chr7_2:13353660-13353679 None:intergenic 55.0%
!! GACTTGGTAGCGTTGTGACG+CGG + chr7_2:13353674-13353693 None:intergenic 55.0%
GCTACCAAGTCACGCGTTTG+TGG - chr7_2:13353683-13353702 Msa1049820:intron 55.0%
GTCACGCGTTTGTGGAAAGC+GGG - chr7_2:13353691-13353710 Msa1049820:intron 55.0%
GTGGAAAGCGGGTCAATAGC+AGG - chr7_2:13353702-13353721 Msa1049820:intron 55.0%
ACGTTTCTGTGAGGCAGAGC+GGG - chr7_2:13353735-13353754 Msa1049820:intron 55.0%
CCCCAAAAATTGACGCGGTG+CGG + chr7_2:13354569-13354588 None:intergenic 55.0%
! CCGCACCGCGTCAATTTTTG+GGG - chr7_2:13354566-13354585 Msa1049820:intron 55.0%
!! CACCGCGTCAATTTTTGGGG+TGG - chr7_2:13354569-13354588 Msa1049820:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG + chr7_2:13354574-13354593 None:intergenic 55.0%
ACCCACATGGGCAGACATAG+CGG - chr7_2:13354912-13354931 Msa1049820:intron 55.0%
ACCGCTATGTCTGCCCATGT+GGG + chr7_2:13354916-13354935 None:intergenic 55.0%
ATGGGCAGACATAGCGGTGT+AGG - chr7_2:13354918-13354937 Msa1049820:intron 55.0%
! CTTGAGAGGAGCACACTCCA+AGG + chr7_2:13354951-13354970 None:intergenic 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG - chr7_2:13354949-13354968 Msa1049820:intron 55.0%
GGACATTGGAATTGGTCCCC+TGG - chr7_2:13355052-13355071 Msa1049820:intron 55.0%
AAACCATCCTATGCGGGACC+TGG - chr7_2:13356512-13356531 Msa1049820:intron 55.0%
GTCCTGTTGTATGGACCTCC+TGG - chr7_2:13356865-13356884 Msa1049820:intron 55.0%
TGCCAGGAGGTCCATACAAC+AGG + chr7_2:13356870-13356889 None:intergenic 55.0%
TTGTATGGACCTCCTGGCAC+TGG - chr7_2:13356871-13356890 Msa1049820:intron 55.0%
TGTATGGACCTCCTGGCACT+GGG - chr7_2:13356872-13356891 Msa1049820:intron 55.0%
! ATGGTTTTCCCAGTGCCAGG+AGG + chr7_2:13356883-13356902 None:intergenic 55.0%
! AGCATGGTTTTCCCAGTGCC+AGG + chr7_2:13356886-13356905 None:intergenic 55.0%
GAAAACTGCTCCGGACTCCT+TGG + chr7_2:13356923-13356942 None:intergenic 55.0%
CCCCGAACCATTTGCTCATC+AGG + chr7_2:13356966-13356985 None:intergenic 55.0%
TTCGGGGATGCCCAAAAGCT+TGG - chr7_2:13356979-13356998 Msa1049820:intron 55.0%
GGGTGGAAACTAGGCTTAGG+TGG - chr7_2:13358009-13358028 Msa1049820:intron 55.0%
GCGTCGTTCATCGGATCATG+AGG - chr7_2:13359066-13359085 Msa1049820:intron 55.0%
!! CATGGGAGTGTTGTCGTGCG+CGG - chr7_2:13352566-13352585 Msa1049820:intron 60.0%
AGTGTTGTCGTGCGCGGCTA+AGG - chr7_2:13352572-13352591 Msa1049820:intron 60.0%
GCGGCCCGCAAGTCGTAATT+AGG + chr7_2:13353525-13353544 None:intergenic 60.0%
CGCACAGGTGGCAGGTAGAA+TGG - chr7_2:13353542-13353561 Msa1049820:intron 60.0%
CAGGTGGCAGGTAGAATGGG+TGG - chr7_2:13353546-13353565 Msa1049820:intron 60.0%
GCGGCTGGGAGAGAGAAAGT+AGG - chr7_2:13354006-13354025 Msa1049820:intron 60.0%
GCGGGCGCTATTACATGACG+CGG + chr7_2:13354543-13354562 None:intergenic 60.0%
AATTGACGCGGTGCGGTACG+CGG + chr7_2:13354562-13354581 None:intergenic 60.0%
CACCGCTATGTCTGCCCATG+TGG + chr7_2:13354917-13354936 None:intergenic 60.0%
GCGGTGTAGGCTTGAGACCT+TGG - chr7_2:13354931-13354950 Msa1049820:intron 60.0%
GACCCTCTGCTAGGGGACAT+TGG - chr7_2:13355038-13355057 Msa1049820:intron 60.0%
TTCGTTCCGGTACGCGGTAC+GGG + chr7_2:13357638-13357657 None:intergenic 60.0%
GTTCGTTCCGGTACGCGGTA+CGG + chr7_2:13357639-13357658 None:intergenic 60.0%
GTTGTCGTGCGCGGCTAAGG+CGG - chr7_2:13352575-13352594 Msa1049820:intron 65.0%
TTACGACTTGCGGGCCGCAC+AGG - chr7_2:13353527-13353546 Msa1049820:intron 65.0%
GCGCGGAGCGGCCAAAAACA+AGG - chr7_2:13353646-13353665 Msa1049820:intron 65.0%
GAGGCAGAGCGGGTCGAAAC+CGG - chr7_2:13353745-13353764 Msa1049820:intron 65.0%
ATTGACGCGGTGCGGTACGC+GGG + chr7_2:13354561-13354580 None:intergenic 65.0%
GTCAAAGCGGAAACGCGGCG+TGG + chr7_2:13354600-13354619 None:intergenic 65.0%
TCCGGTACGCGGTACGGGTA+CGG + chr7_2:13357633-13357652 None:intergenic 65.0%
TCGCGGTTCGTTCCGGTACG+CGG + chr7_2:13357644-13357663 None:intergenic 65.0%
GGCGGCGCTGTACTGCGCTT+TGG - chr7_2:13352593-13352612 Msa1049820:intron 70.0%
GGCTGCTCTCGGCGCTATCG+TGG - chr7_2:13353624-13353643 Msa1049820:intron 70.0%
CTCTCGGCGCTATCGTGGCG+CGG - chr7_2:13353629-13353648 Msa1049820:intron 70.0%
GCGGTACGGGTACGGGTTCG+CGG + chr7_2:13357625-13357644 None:intergenic 70.0%
CCGGTACGCGGTACGGGTAC+GGG + chr7_2:13357632-13357651 None:intergenic 70.0%
CCCGTACCCGTACCGCGTAC+CGG - chr7_2:13357629-13357648 Msa1049820:intron 70.0%
CGACTTGCGGGCCGCACAGG+TGG - chr7_2:13353530-13353549 Msa1049820:intron 75.0%
TTGCGGGCCGCACAGGTGGC+AGG - chr7_2:13353534-13353553 Msa1049820:intron 75.0%
GGCGCTATCGTGGCGCGGAG+CGG - chr7_2:13353634-13353653 Msa1049820:intron 75.0%
AGCGGAAACGCGGCGTGGCG+CGG + chr7_2:13354595-13354614 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 13352536 13359566 13352536 ID=Msa1049820;Name=Msa1049820
chr7_2 mRNA 13352536 13359566 13352536 ID=Msa1049820-mRNA-1;Parent=Msa1049820;Name=Msa1049820-mRNA-1;_AED=0.15;_eAED=0.15;_QI=31|0.75|0.6|0.8|0.5|0.6|5|0|233
chr7_2 exon 13352536 13352561 13352536 ID=Msa1049820-mRNA-1:exon:3357;Parent=Msa1049820-mRNA-1
chr7_2 exon 13352764 13352832 13352764 ID=Msa1049820-mRNA-1:exon:3356;Parent=Msa1049820-mRNA-1
chr7_2 exon 13352957 13353115 13352957 ID=Msa1049820-mRNA-1:exon:3355;Parent=Msa1049820-mRNA-1
chr7_2 exon 13355102 13355402 13355102 ID=Msa1049820-mRNA-1:exon:3354;Parent=Msa1049820-mRNA-1
chr7_2 exon 13359389 13359566 13359389 ID=Msa1049820-mRNA-1:exon:3353;Parent=Msa1049820-mRNA-1
chr7_2 five_prime_UTR 13359536 13359566 13359536 ID=Msa1049820-mRNA-1:five_prime_utr;Parent=Msa1049820-mRNA-1
chr7_2 CDS 13359389 13359535 13359389 ID=Msa1049820-mRNA-1:cds;Parent=Msa1049820-mRNA-1
chr7_2 CDS 13355102 13355402 13355102 ID=Msa1049820-mRNA-1:cds;Parent=Msa1049820-mRNA-1
chr7_2 CDS 13352957 13353115 13352957 ID=Msa1049820-mRNA-1:cds;Parent=Msa1049820-mRNA-1
chr7_2 CDS 13352764 13352832 13352764 ID=Msa1049820-mRNA-1:cds;Parent=Msa1049820-mRNA-1
chr7_2 CDS 13352536 13352561 13352536 ID=Msa1049820-mRNA-1:cds;Parent=Msa1049820-mRNA-1
Gene Sequence

>Msa1049820

ATGGGAGTGTTGTCGTGCGCGGCTAAGGCGGCGCTGTACTGCGCTTTGGTCACGGGTTTCCGTTACCTGAACCGTGAATCATCGGAGAAGGCTAAAGAGATTGCTAAACGTCTTGGTCGTCCTTTTTTTGAAACCAATTCCTATGAGGATGTAATAGCGGATGATGTTATAAATCCTGACCACATCGATGTAGAATTTGACTCTATTGGTGGTCTTGAAACGATCAAACAAACTTTGTTTGAGCTTGTTATTCTACCCCTGCAACGACCAGACTTGTTTTCGCATGGCAAACTTCTTGGACCACAAAAGGGGGTCCTGTTGTATGGACCTCCTGGCACTGGGAAAACCATGCTCGCAAAAGCTATTGCCAAGGAGTCCGGAGCAGTTTTCATTAATGTGATGATATCAAACCTGATGAGCAAATGGTTCGGGGATGCCCAAAAGCTTGTGGCTGCCGTATTTAGCTTGGCTCATAAACTTCAGCCATCCATTATATTCATCGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTTCATCGGATCATGAGGCTCTGTTACAGATGAAAACTGAGTTCATGGCTCTATGGGATGGATTAGCCACCGATCAGAGTGCTCGGGTTATGGTACTTGCAGCAACTAATCGCCCTTCAGAACTTGATGAAGCAATACTTCGGCTTTTGTTGGTTGTTTTTGTTTGTTGA
Protein sequence

>Msa1049820

MGVLSCAAKAALYCALVTGFRYLNRESSEKAKEIAKRLGRPFFETNSYEDVIADDVINPDHIDVEFDSIGGLETIKQTLFELVILPLQRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVMISNLMSKWFGDAQKLVAAVFSLAHKLQPSIIFIDEVDSFLGQRRSSDHEALLQMKTEFMALWDGLATDQSARVMVLAATNRPSELDEAILRLLLVVFVC*