AlfalfaGEDB | Msa1077180

M. sativa cultivar zhongmu-4 / Msa1077180

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048856 GO:0050896 GO:0071704 GO:0090304 GO:0090698 GO:0097659 GO:1901360 GO:1901362 GO:1901576
PFAM: PF04852.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1077180	XP_013449906.1	98.598	214	2	1	1	213	1	214	2.81e-154	436

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1077180	sp\|O82268\|LSH3_ARATH	80.347	173	30	1	25	197	19	187	2.78e-87	259

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1077180	A0A072U2M0	98.598	214	2	1	1	213	1	214	1.34e-154	436

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0016120	Msa1077180	0.800561	1.360086e-48	-8.615850e-47
Msa0017510	Msa1077180	0.827383	1.612426e-54	-8.615850e-47
Msa0040450	Msa1077180	0.802055	6.728034e-49	-8.615850e-47
Msa0072370	Msa1077180	0.810860	9.340734e-51	-8.615850e-47
Msa0110970	Msa1077180	0.837537	4.903623e-57	-8.615850e-47
Msa0657970	Msa1077180	0.801282	9.690973e-49	-8.615850e-47
Msa0682620	Msa1077180	0.800157	1.644301e-48	-8.615850e-47
Msa0688770	Msa1077180	0.806945	6.429245e-50	-8.615850e-47
Msa0716760	Msa1077180	0.812754	3.616160e-51	-8.615850e-47
Msa0722780	Msa1077180	0.836725	7.906216e-57	-8.615850e-47
Msa0722850	Msa1077180	0.816653	4.949147e-52	-8.615850e-47
Msa0723000	Msa1077180	0.833710	4.561140e-56	-8.615850e-47
Msa0723050	Msa1077180	0.838756	2.380640e-57	-8.615850e-47
Msa0824680	Msa1077180	0.801244	9.865794e-49	-8.615850e-47
Msa0140780	Msa1077180	0.826226	3.046825e-54	-8.615850e-47
Msa0157290	Msa1077180	0.828154	1.052774e-54	-8.615850e-47
Msa0169860	Msa1077180	0.813240	2.829029e-51	-8.615850e-47
Msa0197230	Msa1077180	0.807085	6.005630e-50	-8.615850e-47
Msa0203030	Msa1077180	0.814586	1.428861e-51	-8.615850e-47
Msa0218780	Msa1077180	0.805443	1.331934e-49	-8.615850e-47
Msa0221290	Msa1077180	0.825268	5.142483e-54	-8.615850e-47
Msa0392420	Msa1077180	0.812463	4.186803e-51	-8.615850e-47
Msa0392460	Msa1077180	0.810176	1.312984e-50	-8.615850e-47
Msa0392490	Msa1077180	0.803100	4.095245e-49	-8.615850e-47
Msa0451400	Msa1077180	0.811260	7.654047e-51	-8.615850e-47
Msa0461720	Msa1077180	0.805569	1.253342e-49	-8.615850e-47
Msa0465950	Msa1077180	0.820625	6.214524e-53	-8.615850e-47
Msa0999300	Msa1077180	0.811250	7.690320e-51	-8.615850e-47
Msa1009000	Msa1077180	0.810717	1.003365e-50	-8.615850e-47
Msa1036820	Msa1077180	0.824078	9.805499e-54	-8.615850e-47
Msa1077150	Msa1077180	0.866166	3.477469e-65	-8.615850e-47
Msa1077180	Msa1079590	0.803123	4.049941e-49	-8.615850e-47
Msa1077180	Msa1085300	0.801497	8.754788e-49	-8.615850e-47
Msa1077180	Msa1098560	0.836473	9.168354e-57	-8.615850e-47
Msa1077180	Msa1123880	0.809676	1.682417e-50	-8.615850e-47
Msa1077180	Msa1125000	0.815944	7.128975e-52	-8.615850e-47
Msa1077180	Msa1133710	0.808299	3.316308e-50	-8.615850e-47
Msa1077180	Msa1163920	0.816100	6.581453e-52	-8.615850e-47
Msa1077180	Msa1168160	0.807643	4.573442e-50	-8.615850e-47
Msa1077180	Msa1176160	0.829038	6.436159e-55	-8.615850e-47
Msa1077180	Msa1228190	0.801768	7.705907e-49	-8.615850e-47
Msa1077180	Msa1228210	0.833330	5.674391e-56	-8.615850e-47
Msa1077180	Msa1242220	0.801432	9.029751e-49	-8.615850e-47
Msa1077180	Msa1242230	0.815109	1.094062e-51	-8.615850e-47
Msa1077180	Msa1271280	0.838196	3.319453e-57	-8.615850e-47
Msa1077180	Msa1271300	0.836013	1.200149e-56	-8.615850e-47
Msa1077180	Msa1277400	0.803053	4.188250e-49	-8.615850e-47
Msa1077180	Msa1283860	0.814152	1.782084e-51	-8.615850e-47
Msa1077180	Msa1300800	0.807301	5.403349e-50	-8.615850e-47
Msa1077180	Msa1305310	0.807083	6.010757e-50	-8.615850e-47
Msa1077180	Msa1307190	0.833780	4.380342e-56	-8.615850e-47
Msa1077180	Msa1308380	0.808317	3.285930e-50	-8.615850e-47
Msa1077180	Msa1322860	0.821245	4.473418e-53	-8.615850e-47
Msa1077180	Msa1322890	0.807303	5.399711e-50	-8.615850e-47
Msa1077180	Msa1374550	0.820129	8.073034e-53	-8.615850e-47
Msa1077180	Msa1379970	0.802744	4.850646e-49	-8.615850e-47
Msa1077180	Msa1385150	0.819232	1.293647e-52	-8.615850e-47
Msa1077180	Msa1414930	0.802710	4.930127e-49	-8.615850e-47
Msa1077180	Msa1421550	0.810858	9.351249e-51	-8.615850e-47
Msa0243100	Msa1077180	0.820073	8.316707e-53	-8.615850e-47
Msa0287650	Msa1077180	0.813447	2.547720e-51	-8.615850e-47
Msa0289890	Msa1077180	0.802275	6.061550e-49	-8.615850e-47
Msa0487570	Msa1077180	0.818606	1.795192e-52	-8.615850e-47
Msa0487630	Msa1077180	0.812786	3.558331e-51	-8.615850e-47
Msa0503580	Msa1077180	0.816084	6.634143e-52	-8.615850e-47
Msa0517330	Msa1077180	0.800019	1.753498e-48	-8.615850e-47
Msa0523460	Msa1077180	0.800603	1.333657e-48	-8.615850e-47
Msa0535040	Msa1077180	0.807898	4.036116e-50	-8.615850e-47
Msa0537920	Msa1077180	0.803379	3.584736e-49	-8.615850e-47
Msa0602240	Msa1077180	0.803473	3.427456e-49	-8.615850e-47
Msa0602250	Msa1077180	0.812107	5.006738e-51	-8.615850e-47
Msa0843220	Msa1077180	0.826516	2.598403e-54	-8.615850e-47
Msa0880140	Msa1077180	0.830109	3.532745e-55	-8.615850e-47
Msa0895790	Msa1077180	0.805512	1.288191e-49	-8.615850e-47
Msa0900180	Msa1077180	0.812119	4.975587e-51	-8.615850e-47
Msa0909120	Msa1077180	0.800462	1.424912e-48	-8.615850e-47
Msa0936410	Msa1077180	0.800131	1.664341e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1077180	MtrunA17_Chr7g0261381	98.598	214	2	1	1	213	1	214	2.58e-158	436
Msa1077180	MtrunA17_Chr1g0167411	75.132	189	46	1	1	188	1	189	5.00e-94	273
Msa1077180	MtrunA17_Chr1g0183761	100.000	131	0	0	64	194	45	175	2.82e-87	256
Msa1077180	MtrunA17_Chr4g0051251	82.609	138	24	0	63	200	45	182	1.77e-85	252
Msa1077180	MtrunA17_Chr1g0187671	93.333	135	9	0	60	194	49	183	4.36e-85	250
Msa1077180	MtrunA17_Chr5g0431211	80.451	133	26	0	63	195	36	168	1.19e-82	245
Msa1077180	MtrunA17_Chr3g0105921	81.818	132	24	0	64	195	42	173	1.15e-73	222
Msa1077180	MtrunA17_Chr2g0325831	71.724	145	34	1	43	187	9	146	3.74e-73	219
Msa1077180	MtrunA17_Chr7g0274631	64.024	164	49	3	33	195	4	158	4.06e-72	216
Msa1077180	MtrunA17_Chr4g0041141	64.474	152	54	0	36	187	1	152	1.26e-71	215
Msa1077180	MtrunA17_Chr2g0283861	75.758	132	32	0	63	194	34	165	8.01e-71	213
Msa1077180	MtrunA17_Chr2g0315791	75.000	132	33	0	63	194	32	163	4.92e-70	211
Msa1077180	MtrunA17_Chr1g0190231	83.200	125	21	0	64	188	40	164	2.10e-69	210
Msa1077180	MtrunA17_Chr8g0379061	72.800	125	34	0	63	187	84	208	2.94e-55	176
Msa1077180	MtrunA17_Chr1g0211641	84.783	46	7	0	57	102	64	109	3.07e-23	89.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1077180	AT2G31160.1	80.347	173	30	1	25	197	19	187	2.83e-88	259
Msa1077180	AT1G07090.1	76.389	144	34	0	53	196	20	163	1.96e-84	249
Msa1077180	AT3G23290.2	71.809	188	37	2	1	188	1	172	7.26e-80	237
Msa1077180	AT5G58500.1	79.104	134	27	1	63	195	18	151	7.49e-79	234
Msa1077180	AT2G42610.1	75.714	140	34	0	59	198	20	159	6.63e-74	221
Msa1077180	AT2G42610.2	75.714	140	34	0	59	198	20	159	6.63e-74	221
Msa1077180	AT5G28490.1	83.088	136	23	0	58	193	19	154	1.21e-72	219
Msa1077180	AT3G04510.1	80.000	130	26	0	64	193	33	162	1.55e-69	211
Msa1077180	AT1G78815.1	67.200	125	41	0	63	187	39	163	1.04e-62	194
Msa1077180	AT4G18610.1	69.048	126	38	1	63	187	36	161	4.98e-62	192
Msa1077180	AT1G16910.1	61.194	134	52	0	59	192	18	151	2.84e-58	181

Find 87 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATCATGGTGTTTAGGTATT+TGG	0.100645	7_2:-75744104	Msa1077180:intron
TTTAGGTATTTGGATCAATT+TGG	0.178063	7_2:-75744094	Msa1077180:intron
GCACCAAAAGGATTTGTTTC+TGG	0.187984	7_2:+75743923	None:intergenic
AATTGATAGCTTGTTCTTCT+AGG	0.228267	7_2:+75744872	None:intergenic
CATATAGAGTGCTTTGTCTT+TGG	0.231876	7_2:-75743666	Msa1077180:three_prime_UTR
CACATGTTCTTGAATTTCTA+AGG	0.231888	7_2:-75744459	Msa1077180:intron
CTTCCCCATGCTTGCCTTAG+AGG	0.241570	7_2:+75744001	None:intergenic
CTAAAATCTAGTATGATTAA+AGG	0.244347	7_2:+75743347	None:intergenic
AAGAACAAGCTATCAATTCT+TGG	0.246890	7_2:-75744867	Msa1077180:five_prime_UTR
TCGATGTGGATAACATTATT+TGG	0.250214	7_2:-75743184	Msa1077180:three_prime_UTR
GATTCAATTCAAGAATTTAT+AGG	0.256232	7_2:-75744739	Msa1077180:CDS
ATTCAATTCAAGAATTTATA+GGG	0.271654	7_2:-75744738	Msa1077180:CDS
AAAATCCACAGCTATAGTTT+TGG	0.278394	7_2:-75745086	Msa1077180:five_prime_UTR
CTATTAATATTCTTCATTCA+TGG	0.289901	7_2:+75745206	None:intergenic
GGACATGGTGCTGGTGGATT+TGG	0.312240	7_2:+75744028	None:intergenic
GCAATTTGATTTGCCACAAA+TGG	0.333743	7_2:-75743267	Msa1077180:three_prime_UTR
GAGAGAGAAGTGTTAGGCTT+TGG	0.337929	7_2:+75745241	None:intergenic
CATGAATGAAGAATATTAAT+AGG	0.338528	7_2:-75745205	Msa1077180:five_prime_UTR
TGTTAGGCTTTGGAGGAAAT+AGG	0.341015	7_2:+75745251	None:intergenic
GGATTTGGATGCCCATAAAA+TGG	0.348197	7_2:+75744043	None:intergenic
TTAGGTATTTGGATCAATTT+GGG	0.353257	7_2:-75744093	Msa1077180:intron
CACCATGTCCATGTCCTCTA+AGG	0.357440	7_2:-75744015	Msa1077180:CDS
GTGCACCGCTGCACCTAGAT+AGG	0.377390	7_2:+75744479	None:intergenic
AGAGAAGTGTTAGGCTTTGG+AGG	0.380585	7_2:+75745244	None:intergenic
CGCCGTGACTGGAACACCTT+TGG	0.383976	7_2:-75744535	Msa1077180:CDS
TGCCCATAAAATGGACAAAT+TGG	0.388714	7_2:+75744052	None:intergenic
TCAAATTTAAATTCCATTTG+TGG	0.399891	7_2:+75743254	None:intergenic
GAAAAGTTGGACAGTAGGTT+TGG	0.403335	7_2:+75745277	None:intergenic
CTCATAGCGGCTGCTACTGT+TGG	0.404554	7_2:+75744567	None:intergenic
AGGAAATAGGAAAGAAAAGT+TGG	0.404681	7_2:+75745264	None:intergenic
GTTGTTATTCATGAAGTTGC+AGG	0.404729	7_2:+75744693	None:intergenic
TTCTGTCACAGCAAGTAAAC+AGG	0.405995	7_2:+75743641	None:intergenic
AAACCAGAAACAAATCCTTT+TGG	0.416713	7_2:-75743926	Msa1077180:CDS
GAACTTTGAAGCTACATTTG+TGG	0.427671	7_2:-75743233	Msa1077180:three_prime_UTR
TCCACATCGATCACTATGTA+TGG	0.449619	7_2:+75743197	None:intergenic
AGAATCAGAAACGCCGTGAC+TGG	0.455928	7_2:-75744546	Msa1077180:CDS
ATTGATAGCTTGTTCTTCTA+GGG	0.463832	7_2:+75744873	None:intergenic
GTTGCACTTGCACCTTGTGC+TGG	0.465381	7_2:+75743782	None:intergenic
ACTGTTGGGACTGTTGATGA+TGG	0.472335	7_2:+75744582	None:intergenic
TCATAGCTGTTATTGTTGAA+TGG	0.478047	7_2:+75743457	None:intergenic
CTTGCACCTTGTGCTGGTGG+TGG	0.478161	7_2:+75743788	None:intergenic
GGAAAGAAAAGTTGGACAGT+AGG	0.482092	7_2:+75745272	None:intergenic
GTCCACCTCTTTCCCTATCT+AGG	0.482546	7_2:-75744492	Msa1077180:CDS
AGTTGGACAGTAGGTTTGGA+TGG	0.483212	7_2:+75745281	None:intergenic
TCATAGCGGCTGCTACTGTT+GGG	0.492824	7_2:+75744568	None:intergenic
CACAAAATTCAAAACAACCT+TGG	0.498481	7_2:-75744820	Msa1077180:five_prime_UTR
GGTGGAACTTGTTGTTGTTG+TGG	0.502983	7_2:+75743806	None:intergenic
TCATCACTTGTTAGTGCTAG+TGG	0.505405	7_2:+75745168	None:intergenic
ACTTGTTGTTGTTGTGGTGG+TGG	0.511066	7_2:+75743812	None:intergenic
CTCACAGCTCGAGCACCAAA+AGG	0.515193	7_2:+75743911	None:intergenic
GGAAGCCTTGATGCACTCAT+AGG	0.523874	7_2:-75743983	Msa1077180:CDS
CATGTCCTCTAAGGCAAGCA+TGG	0.527761	7_2:-75744006	Msa1077180:CDS
CAGTAGGTTTGGATGGAGAC+AGG	0.529323	7_2:+75745288	None:intergenic
CATGCTTGCCTTAGAGGACA+TGG	0.533497	7_2:+75744007	None:intergenic
ACAACAACTACTACAGCAAG+TGG	0.533770	7_2:-75744631	Msa1077180:CDS
GGAACTTGTTGTTGTTGTGG+TGG	0.534959	7_2:+75743809	None:intergenic
GCACTTGCACCTTGTGCTGG+TGG	0.535986	7_2:+75743785	None:intergenic
AGAGAATGTGATGAGATTGA+TGG	0.544970	7_2:+75745025	None:intergenic
AGAGGACATGGACATGGTGC+TGG	0.548410	7_2:+75744019	None:intergenic
TGTTGTTGTTAAGCTTGTTG+TGG	0.548599	7_2:+75744648	None:intergenic
ATGTCCTCTAAGGCAAGCAT+GGG	0.548889	7_2:-75744005	Msa1077180:CDS
TTGAAGCTTGTGAATATACA+TGG	0.551801	7_2:-75743516	Msa1077180:three_prime_UTR
CTTTGCGCTTTGCAGATCCA+AGG	0.557748	7_2:+75744803	None:intergenic
TTCAATTCAAGAATTTATAG+GGG	0.568491	7_2:-75744737	Msa1077180:CDS
GACCAAAGGTGTTCCAGTCA+CGG	0.570044	7_2:+75744533	None:intergenic
TACTGGTAGTAGACTCATAG+TGG	0.572208	7_2:-75743548	Msa1077180:three_prime_UTR
AGACAGTGCTGTGTTTGTAC+TGG	0.573730	7_2:-75743565	Msa1077180:three_prime_UTR
TGCACCGCTGCACCTAGATA+GGG	0.577239	7_2:+75744480	None:intergenic
GCTTCCCAAAACTATAGCTG+TGG	0.585676	7_2:+75745081	None:intergenic
CTGCACCTAGATAGGGAAAG+AGG	0.589406	7_2:+75744487	None:intergenic
GATCTTCAATCAAAAGCAAG+AGG	0.593770	7_2:-75743866	Msa1077180:CDS
CTTGGATCTGCAAAGCGCAA+AGG	0.600861	7_2:-75744802	Msa1077180:five_prime_UTR
GAGAATGTGATGAGATTGAT+GGG	0.614654	7_2:+75745026	None:intergenic
ATTCTTGAGGTACTGACCAA+AGG	0.618944	7_2:+75744519	None:intergenic
GACGACCTATGAGTGCATCA+AGG	0.630031	7_2:+75743978	None:intergenic
CAAGTTCCACCACCAGCACA+AGG	0.630971	7_2:-75743794	Msa1077180:CDS
GATGGTTGAAGCTGCAGATG+AGG	0.631628	7_2:+75744600	None:intergenic
TGCCTTAGAGGACATGGACA+TGG	0.634202	7_2:+75744013	None:intergenic
GGACATGGACATGGTGCTGG+TGG	0.656231	7_2:+75744022	None:intergenic
CTTTCCCTATCTAGGTGCAG+CGG	0.657727	7_2:-75744484	Msa1077180:CDS
CACCTAGATAGGGAAAGAGG+TGG	0.660487	7_2:+75744490	None:intergenic
GAAGATCACGAACTTCGCGA+AGG	0.664694	7_2:+75743882	None:intergenic
GGCGTTTCTGATTCTCATAG+CGG	0.670856	7_2:+75744554	None:intergenic
TCCATACATAGTGATCGATG+TGG	0.693643	7_2:-75743198	Msa1077180:three_prime_UTR
TGTCCTCTAAGGCAAGCATG+GGG	0.718093	7_2:-75744004	Msa1077180:CDS
GCTGAGAAATGAGAATCACA+CGG	0.732864	7_2:+75743483	None:intergenic
GAGGTGGACGATGATTCTTG+AGG	0.772685	7_2:+75744506	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ACTATTTTTATGTTTATTTT+AGG	+	chr7_2:75743528-75743547	None:intergenic	10.0%
!!!	ACTTTTTTTTAATCATATTT+AGG	-	chr7_2:75744744-75744763	Msa1077180:CDS	10.0%
!!!	CTTTTTTTTAATCATATTTA+GGG	-	chr7_2:75744745-75744764	Msa1077180:CDS	10.0%
!!!	ACTATTTTTATGTTTATTTT+AGG	+	chr7_2:75743528-75743547	None:intergenic	10.0%
!!!	ACTTTTTTTTAATCATATTT+AGG	-	chr7_2:75744744-75744763	Msa1077180:CDS	10.0%
!!!	CTTTTTTTTAATCATATTTA+GGG	-	chr7_2:75744745-75744764	Msa1077180:CDS	10.0%
!!!	TAGTTTTTATTTCCTTAAAA+GGG	+	chr7_2:75743355-75743374	None:intergenic	15.0%
!!!	TTTATGTTTATTTTAGGAAT+AGG	+	chr7_2:75743522-75743541	None:intergenic	15.0%
!!	ATTCAATTCAAGAATTTATA+GGG	-	chr7_2:75743728-75743747	Msa1077180:three_prime_UTR	15.0%
!!!	TACATCACAATTTTTTATAT+TGG	-	chr7_2:75744149-75744168	Msa1077180:intron	15.0%
!!!	TTATTTTGGTTAATTTATCA+TGG	-	chr7_2:75744347-75744366	Msa1077180:intron	15.0%
!!!	TAGTTTTTATTTCCTTAAAA+GGG	+	chr7_2:75743355-75743374	None:intergenic	15.0%
!!!	TTTATGTTTATTTTAGGAAT+AGG	+	chr7_2:75743522-75743541	None:intergenic	15.0%
!!	ATTCAATTCAAGAATTTATA+GGG	-	chr7_2:75743728-75743747	Msa1077180:three_prime_UTR	15.0%
!!!	TACATCACAATTTTTTATAT+TGG	-	chr7_2:75744149-75744168	Msa1077180:intron	15.0%
!!!	TTATTTTGGTTAATTTATCA+TGG	-	chr7_2:75744347-75744366	Msa1077180:intron	15.0%
!!	CTATTAATATTCTTCATTCA+TGG	+	chr7_2:75743263-75743282	None:intergenic	20.0%
!!	CATGAATGAAGAATATTAAT+AGG	-	chr7_2:75743261-75743280	Msa1077180:three_prime_UTR	20.0%
!!!	GTAGTTTTTATTTCCTTAAA+AGG	+	chr7_2:75743356-75743375	None:intergenic	20.0%
!!!	TTTATTTTAGGAATAGGATA+GGG	+	chr7_2:75743516-75743535	None:intergenic	20.0%
!!	AAGTGAAAGAGTTAATTAAT+TGG	+	chr7_2:75743561-75743580	None:intergenic	20.0%
!!	GATTCAATTCAAGAATTTAT+AGG	-	chr7_2:75743727-75743746	Msa1077180:three_prime_UTR	20.0%
!!	TTCAATTCAAGAATTTATAG+GGG	-	chr7_2:75743729-75743748	Msa1077180:three_prime_UTR	20.0%
!!	CTAAAATCTAGTATGATTAA+AGG	+	chr7_2:75745122-75745141	None:intergenic	20.0%
!!!	CTTTAATCATACTAGATTTT+AGG	-	chr7_2:75745120-75745139	Msa1077180:five_prime_UTR	20.0%
!!	TCAAATTTAAATTCCATTTG+TGG	+	chr7_2:75745215-75745234	None:intergenic	20.0%
!!	CTATTAATATTCTTCATTCA+TGG	+	chr7_2:75743263-75743282	None:intergenic	20.0%
!!	CATGAATGAAGAATATTAAT+AGG	-	chr7_2:75743261-75743280	Msa1077180:three_prime_UTR	20.0%
!!!	GTAGTTTTTATTTCCTTAAA+AGG	+	chr7_2:75743356-75743375	None:intergenic	20.0%
!!!	TTTATTTTAGGAATAGGATA+GGG	+	chr7_2:75743516-75743535	None:intergenic	20.0%
!!	AAGTGAAAGAGTTAATTAAT+TGG	+	chr7_2:75743561-75743580	None:intergenic	20.0%
!!	GATTCAATTCAAGAATTTAT+AGG	-	chr7_2:75743727-75743746	Msa1077180:three_prime_UTR	20.0%
!!	TTCAATTCAAGAATTTATAG+GGG	-	chr7_2:75743729-75743748	Msa1077180:three_prime_UTR	20.0%
!!	CTAAAATCTAGTATGATTAA+AGG	+	chr7_2:75745122-75745141	None:intergenic	20.0%
!!!	CTTTAATCATACTAGATTTT+AGG	-	chr7_2:75745120-75745139	Msa1077180:five_prime_UTR	20.0%
!!	TCAAATTTAAATTCCATTTG+TGG	+	chr7_2:75745215-75745234	None:intergenic	20.0%
!!!	GTTTATTTTAGGAATAGGAT+AGG	+	chr7_2:75743517-75743536	None:intergenic	25.0%
!!	AACGTTAAGCTATATTTTCA+TGG	-	chr7_2:75743705-75743724	Msa1077180:three_prime_UTR	25.0%
!	CATTGTATAACTCAAAATTG+CGG	-	chr7_2:75744284-75744303	Msa1077180:intron	25.0%
!	GTTAATTTATCATGGTGTTT+AGG	-	chr7_2:75744355-75744374	Msa1077180:intron	25.0%
!	TTTAGGTATTTGGATCAATT+TGG	-	chr7_2:75744372-75744391	Msa1077180:intron	25.0%
!	TTAGGTATTTGGATCAATTT+GGG	-	chr7_2:75744373-75744392	Msa1077180:intron	25.0%
!!!	GTTTATTTTAGGAATAGGAT+AGG	+	chr7_2:75743517-75743536	None:intergenic	25.0%
!!	AACGTTAAGCTATATTTTCA+TGG	-	chr7_2:75743705-75743724	Msa1077180:three_prime_UTR	25.0%
!	CATTGTATAACTCAAAATTG+CGG	-	chr7_2:75744284-75744303	Msa1077180:intron	25.0%
!	GTTAATTTATCATGGTGTTT+AGG	-	chr7_2:75744355-75744374	Msa1077180:intron	25.0%
!	TTTAGGTATTTGGATCAATT+TGG	-	chr7_2:75744372-75744391	Msa1077180:intron	25.0%
!	TTAGGTATTTGGATCAATTT+GGG	-	chr7_2:75744373-75744392	Msa1077180:intron	25.0%
	AGGAAATAGGAAAGAAAAGT+TGG	+	chr7_2:75743205-75743224	None:intergenic	30.0%
!!!	ACTATAGCTGTGGATTTTTT+AGG	+	chr7_2:75743378-75743397	None:intergenic	30.0%
!	AAAATCCACAGCTATAGTTT+TGG	-	chr7_2:75743380-75743399	Msa1077180:three_prime_UTR	30.0%
!	AAATCCACAGCTATAGTTTT+GGG	-	chr7_2:75743381-75743400	Msa1077180:three_prime_UTR	30.0%
!!!	AACTCTTTCACTTTTTTCCA+AGG	-	chr7_2:75743568-75743587	Msa1077180:three_prime_UTR	30.0%
!!	ATTGATAGCTTGTTCTTCTA+GGG	+	chr7_2:75743596-75743615	None:intergenic	30.0%
!!	AATTGATAGCTTGTTCTTCT+AGG	+	chr7_2:75743597-75743616	None:intergenic	30.0%
	AAGAACAAGCTATCAATTCT+TGG	-	chr7_2:75743599-75743618	Msa1077180:three_prime_UTR	30.0%
	CACAAAATTCAAAACAACCT+TGG	-	chr7_2:75743646-75743665	Msa1077180:three_prime_UTR	30.0%
	CACATGTTCTTGAATTTCTA+AGG	-	chr7_2:75744007-75744026	Msa1077180:CDS	30.0%
	TATCATGGTGTTTAGGTATT+TGG	-	chr7_2:75744362-75744381	Msa1077180:intron	30.0%
!	ACACCAATTTGTCCATTTTA+TGG	-	chr7_2:75744411-75744430	Msa1077180:intron	30.0%
!	CACCAATTTGTCCATTTTAT+GGG	-	chr7_2:75744412-75744431	Msa1077180:intron	30.0%
!	AAACCAGAAACAAATCCTTT+TGG	-	chr7_2:75744540-75744559	Msa1077180:CDS	30.0%
	TTGAAGCTTGTGAATATACA+TGG	-	chr7_2:75744950-75744969	Msa1077180:intron	30.0%
	TCATAGCTGTTATTGTTGAA+TGG	+	chr7_2:75745012-75745031	None:intergenic	30.0%
	TCGATGTGGATAACATTATT+TGG	-	chr7_2:75745282-75745301	Msa1077180:five_prime_UTR	30.0%
	AGGAAATAGGAAAGAAAAGT+TGG	+	chr7_2:75743205-75743224	None:intergenic	30.0%
!!!	ACTATAGCTGTGGATTTTTT+AGG	+	chr7_2:75743378-75743397	None:intergenic	30.0%
!	AAAATCCACAGCTATAGTTT+TGG	-	chr7_2:75743380-75743399	Msa1077180:three_prime_UTR	30.0%
!	AAATCCACAGCTATAGTTTT+GGG	-	chr7_2:75743381-75743400	Msa1077180:three_prime_UTR	30.0%
!!!	AACTCTTTCACTTTTTTCCA+AGG	-	chr7_2:75743568-75743587	Msa1077180:three_prime_UTR	30.0%
!!	ATTGATAGCTTGTTCTTCTA+GGG	+	chr7_2:75743596-75743615	None:intergenic	30.0%
!!	AATTGATAGCTTGTTCTTCT+AGG	+	chr7_2:75743597-75743616	None:intergenic	30.0%
	AAGAACAAGCTATCAATTCT+TGG	-	chr7_2:75743599-75743618	Msa1077180:three_prime_UTR	30.0%
	CACAAAATTCAAAACAACCT+TGG	-	chr7_2:75743646-75743665	Msa1077180:three_prime_UTR	30.0%
	CACATGTTCTTGAATTTCTA+AGG	-	chr7_2:75744007-75744026	Msa1077180:CDS	30.0%
	TATCATGGTGTTTAGGTATT+TGG	-	chr7_2:75744362-75744381	Msa1077180:intron	30.0%
!	ACACCAATTTGTCCATTTTA+TGG	-	chr7_2:75744411-75744430	Msa1077180:intron	30.0%
!	CACCAATTTGTCCATTTTAT+GGG	-	chr7_2:75744412-75744431	Msa1077180:intron	30.0%
!	AAACCAGAAACAAATCCTTT+TGG	-	chr7_2:75744540-75744559	Msa1077180:CDS	30.0%
	TTGAAGCTTGTGAATATACA+TGG	-	chr7_2:75744950-75744969	Msa1077180:intron	30.0%
	TCATAGCTGTTATTGTTGAA+TGG	+	chr7_2:75745012-75745031	None:intergenic	30.0%
	TCGATGTGGATAACATTATT+TGG	-	chr7_2:75745282-75745301	Msa1077180:five_prime_UTR	30.0%
	GAGAATGTGATGAGATTGAT+GGG	+	chr7_2:75743443-75743462	None:intergenic	35.0%
	AGAGAATGTGATGAGATTGA+TGG	+	chr7_2:75743444-75743463	None:intergenic	35.0%
!	CTTTCTGCTTCATCATTTTC+AGG	-	chr7_2:75743481-75743500	Msa1077180:three_prime_UTR	35.0%
!	GTTGTTATTCATGAAGTTGC+AGG	+	chr7_2:75743776-75743795	None:intergenic	35.0%
!!	TGTTGTTGTTAAGCTTGTTG+TGG	+	chr7_2:75743821-75743840	None:intergenic	35.0%
	ATGCAGTTGAAAAGAAAGAG+AGG	+	chr7_2:75744089-75744108	None:intergenic	35.0%
!!	ATTTGACTTGTTAACCGACA+TGG	-	chr7_2:75744209-75744228	Msa1077180:intron	35.0%
	GAACGAGATTTAAACCATGT+CGG	+	chr7_2:75744226-75744245	None:intergenic	35.0%
	TGCCCATAAAATGGACAAAT+TGG	+	chr7_2:75744417-75744436	None:intergenic	35.0%
	GATCTTCAATCAAAAGCAAG+AGG	-	chr7_2:75744600-75744619	Msa1077180:CDS	35.0%
!	CATATAGAGTGCTTTGTCTT+TGG	-	chr7_2:75744800-75744819	Msa1077180:five_prime_UTR	35.0%
!	TTCACAAGCTTCAACTTTTC+AGG	+	chr7_2:75744944-75744963	None:intergenic	35.0%
!!	GCAATTTGATTTGCCACAAA+TGG	-	chr7_2:75745199-75745218	Msa1077180:five_prime_UTR	35.0%
!!	GAACTTTGAAGCTACATTTG+TGG	-	chr7_2:75745233-75745252	Msa1077180:five_prime_UTR	35.0%
	GAGAATGTGATGAGATTGAT+GGG	+	chr7_2:75743443-75743462	None:intergenic	35.0%
	AGAGAATGTGATGAGATTGA+TGG	+	chr7_2:75743444-75743463	None:intergenic	35.0%
!	CTTTCTGCTTCATCATTTTC+AGG	-	chr7_2:75743481-75743500	Msa1077180:three_prime_UTR	35.0%
!	GTTGTTATTCATGAAGTTGC+AGG	+	chr7_2:75743776-75743795	None:intergenic	35.0%
!!	TGTTGTTGTTAAGCTTGTTG+TGG	+	chr7_2:75743821-75743840	None:intergenic	35.0%
	ATGCAGTTGAAAAGAAAGAG+AGG	+	chr7_2:75744089-75744108	None:intergenic	35.0%
!!	ATTTGACTTGTTAACCGACA+TGG	-	chr7_2:75744209-75744228	Msa1077180:intron	35.0%
	GAACGAGATTTAAACCATGT+CGG	+	chr7_2:75744226-75744245	None:intergenic	35.0%
	TGCCCATAAAATGGACAAAT+TGG	+	chr7_2:75744417-75744436	None:intergenic	35.0%
	GATCTTCAATCAAAAGCAAG+AGG	-	chr7_2:75744600-75744619	Msa1077180:CDS	35.0%
!	CATATAGAGTGCTTTGTCTT+TGG	-	chr7_2:75744800-75744819	Msa1077180:five_prime_UTR	35.0%
!	TTCACAAGCTTCAACTTTTC+AGG	+	chr7_2:75744944-75744963	None:intergenic	35.0%
!!	GCAATTTGATTTGCCACAAA+TGG	-	chr7_2:75745199-75745218	Msa1077180:five_prime_UTR	35.0%
!!	GAACTTTGAAGCTACATTTG+TGG	-	chr7_2:75745233-75745252	Msa1077180:five_prime_UTR	35.0%
	GAAAAGTTGGACAGTAGGTT+TGG	+	chr7_2:75743192-75743211	None:intergenic	40.0%
	GGAAAGAAAAGTTGGACAGT+AGG	+	chr7_2:75743197-75743216	None:intergenic	40.0%
!!	TGTTAGGCTTTGGAGGAAAT+AGG	+	chr7_2:75743218-75743237	None:intergenic	40.0%
!	TCATCACTTGTTAGTGCTAG+TGG	+	chr7_2:75743301-75743320	None:intergenic	40.0%
!!	GAGTTTGCTTCACCCTTTTA+AGG	-	chr7_2:75743340-75743359	Msa1077180:three_prime_UTR	40.0%
	ACAACAACTACTACAGCAAG+TGG	-	chr7_2:75743835-75743854	Msa1077180:CDS	40.0%
!!	ATTCTTGAGGTACTGACCAA+AGG	+	chr7_2:75743950-75743969	None:intergenic	40.0%
	AAAGAGAGGTTGCATTTGCA+TGG	+	chr7_2:75744075-75744094	None:intergenic	40.0%
	GGATTTGGATGCCCATAAAA+TGG	+	chr7_2:75744426-75744445	None:intergenic	40.0%
!!!	CGTGCTGCTTTTGAAGAAAA+TGG	-	chr7_2:75744513-75744532	Msa1077180:CDS	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+AGG	-	chr7_2:75744516-75744535	Msa1077180:CDS	40.0%
!	GCACCAAAAGGATTTGTTTC+TGG	+	chr7_2:75744546-75744565	None:intergenic	40.0%
	TTCTGTCACAGCAAGTAAAC+AGG	+	chr7_2:75744828-75744847	None:intergenic	40.0%
	TACTGGTAGTAGACTCATAG+TGG	-	chr7_2:75744918-75744937	Msa1077180:intron	40.0%
	GCTGAGAAATGAGAATCACA+CGG	+	chr7_2:75744986-75745005	None:intergenic	40.0%
	TCCATACATAGTGATCGATG+TGG	-	chr7_2:75745268-75745287	Msa1077180:five_prime_UTR	40.0%
	TCCACATCGATCACTATGTA+TGG	+	chr7_2:75745272-75745291	None:intergenic	40.0%
	GAAAAGTTGGACAGTAGGTT+TGG	+	chr7_2:75743192-75743211	None:intergenic	40.0%
	GGAAAGAAAAGTTGGACAGT+AGG	+	chr7_2:75743197-75743216	None:intergenic	40.0%
!!	TGTTAGGCTTTGGAGGAAAT+AGG	+	chr7_2:75743218-75743237	None:intergenic	40.0%
!	TCATCACTTGTTAGTGCTAG+TGG	+	chr7_2:75743301-75743320	None:intergenic	40.0%
!!	GAGTTTGCTTCACCCTTTTA+AGG	-	chr7_2:75743340-75743359	Msa1077180:three_prime_UTR	40.0%
	ACAACAACTACTACAGCAAG+TGG	-	chr7_2:75743835-75743854	Msa1077180:CDS	40.0%
!!	ATTCTTGAGGTACTGACCAA+AGG	+	chr7_2:75743950-75743969	None:intergenic	40.0%
	AAAGAGAGGTTGCATTTGCA+TGG	+	chr7_2:75744075-75744094	None:intergenic	40.0%
	GGATTTGGATGCCCATAAAA+TGG	+	chr7_2:75744426-75744445	None:intergenic	40.0%
!!!	CGTGCTGCTTTTGAAGAAAA+TGG	-	chr7_2:75744513-75744532	Msa1077180:CDS	40.0%
!!!	GCTGCTTTTGAAGAAAATGG+AGG	-	chr7_2:75744516-75744535	Msa1077180:CDS	40.0%
!	GCACCAAAAGGATTTGTTTC+TGG	+	chr7_2:75744546-75744565	None:intergenic	40.0%
	TTCTGTCACAGCAAGTAAAC+AGG	+	chr7_2:75744828-75744847	None:intergenic	40.0%
	TACTGGTAGTAGACTCATAG+TGG	-	chr7_2:75744918-75744937	Msa1077180:intron	40.0%
	GCTGAGAAATGAGAATCACA+CGG	+	chr7_2:75744986-75745005	None:intergenic	40.0%
	TCCATACATAGTGATCGATG+TGG	-	chr7_2:75745268-75745287	Msa1077180:five_prime_UTR	40.0%
	TCCACATCGATCACTATGTA+TGG	+	chr7_2:75745272-75745291	None:intergenic	40.0%
	AGTTGGACAGTAGGTTTGGA+TGG	+	chr7_2:75743188-75743207	None:intergenic	45.0%
!!	AGAGAAGTGTTAGGCTTTGG+AGG	+	chr7_2:75743225-75743244	None:intergenic	45.0%
!!	GAGAGAGAAGTGTTAGGCTT+TGG	+	chr7_2:75743228-75743247	None:intergenic	45.0%
!!	GAGAGAGAGAGAGAAGTGTT+AGG	+	chr7_2:75743234-75743253	None:intergenic	45.0%
	GCTTCCCAAAACTATAGCTG+TGG	+	chr7_2:75743388-75743407	None:intergenic	45.0%
!!	CTTGTTCTTCTAGGGTTCCT+TGG	+	chr7_2:75743588-75743607	None:intergenic	45.0%
!	ACTGTTGGGACTGTTGATGA+TGG	+	chr7_2:75743887-75743906	None:intergenic	45.0%
	GGCGTTTCTGATTCTCATAG+CGG	+	chr7_2:75743915-75743934	None:intergenic	45.0%
!!	ATGTCCTCTAAGGCAAGCAT+GGG	-	chr7_2:75744461-75744480	Msa1077180:CDS	45.0%
!!	ACTTGTTGTTGTTGTGGTGG+TGG	+	chr7_2:75744657-75744676	None:intergenic	45.0%
!!	GGAACTTGTTGTTGTTGTGG+TGG	+	chr7_2:75744660-75744679	None:intergenic	45.0%
!!	GGTGGAACTTGTTGTTGTTG+TGG	+	chr7_2:75744663-75744682	None:intergenic	45.0%
	AGACAGTGCTGTGTTTGTAC+TGG	-	chr7_2:75744901-75744920	Msa1077180:intron	45.0%
	AGTTGGACAGTAGGTTTGGA+TGG	+	chr7_2:75743188-75743207	None:intergenic	45.0%
!!	AGAGAAGTGTTAGGCTTTGG+AGG	+	chr7_2:75743225-75743244	None:intergenic	45.0%
!!	GAGAGAGAAGTGTTAGGCTT+TGG	+	chr7_2:75743228-75743247	None:intergenic	45.0%
!!	GAGAGAGAGAGAGAAGTGTT+AGG	+	chr7_2:75743234-75743253	None:intergenic	45.0%
	GCTTCCCAAAACTATAGCTG+TGG	+	chr7_2:75743388-75743407	None:intergenic	45.0%
!!	CTTGTTCTTCTAGGGTTCCT+TGG	+	chr7_2:75743588-75743607	None:intergenic	45.0%
!	ACTGTTGGGACTGTTGATGA+TGG	+	chr7_2:75743887-75743906	None:intergenic	45.0%
	GGCGTTTCTGATTCTCATAG+CGG	+	chr7_2:75743915-75743934	None:intergenic	45.0%
!!	ATGTCCTCTAAGGCAAGCAT+GGG	-	chr7_2:75744461-75744480	Msa1077180:CDS	45.0%
!!	ACTTGTTGTTGTTGTGGTGG+TGG	+	chr7_2:75744657-75744676	None:intergenic	45.0%
!!	GGAACTTGTTGTTGTTGTGG+TGG	+	chr7_2:75744660-75744679	None:intergenic	45.0%
!!	GGTGGAACTTGTTGTTGTTG+TGG	+	chr7_2:75744663-75744682	None:intergenic	45.0%
	AGACAGTGCTGTGTTTGTAC+TGG	-	chr7_2:75744901-75744920	Msa1077180:intron	45.0%
!!!	TATGATTTTTAATATTATTT+TGG	-	chr7_2:75744333-75744352	Msa1077180:intron	5.0%
!!!	TATGATTTTTAATATTATTT+TGG	-	chr7_2:75744333-75744352	Msa1077180:intron	5.0%
	CAGTAGGTTTGGATGGAGAC+AGG	+	chr7_2:75743181-75743200	None:intergenic	50.0%
	CTTTGCGCTTTGCAGATCCA+AGG	+	chr7_2:75743666-75743685	None:intergenic	50.0%
	CTTGGATCTGCAAAGCGCAA+AGG	-	chr7_2:75743664-75743683	Msa1077180:three_prime_UTR	50.0%
	GATGGTTGAAGCTGCAGATG+AGG	+	chr7_2:75743869-75743888	None:intergenic	50.0%
	TCATAGCGGCTGCTACTGTT+GGG	+	chr7_2:75743901-75743920	None:intergenic	50.0%
	AGAATCAGAAACGCCGTGAC+TGG	-	chr7_2:75743920-75743939	Msa1077180:CDS	50.0%
!!	GACCAAAGGTGTTCCAGTCA+CGG	+	chr7_2:75743936-75743955	None:intergenic	50.0%
	GAGGTGGACGATGATTCTTG+AGG	+	chr7_2:75743963-75743982	None:intergenic	50.0%
	GTCCACCTCTTTCCCTATCT+AGG	-	chr7_2:75743974-75743993	Msa1077180:CDS	50.0%
	CACCTAGATAGGGAAAGAGG+TGG	+	chr7_2:75743979-75743998	None:intergenic	50.0%
	CTGCACCTAGATAGGGAAAG+AGG	+	chr7_2:75743982-75744001	None:intergenic	50.0%
	CTTTCCCTATCTAGGTGCAG+CGG	-	chr7_2:75743982-75744001	Msa1077180:CDS	50.0%
	CACCATGTCCATGTCCTCTA+AGG	-	chr7_2:75744451-75744470	Msa1077180:intron	50.0%
	TGCCTTAGAGGACATGGACA+TGG	+	chr7_2:75744456-75744475	None:intergenic	50.0%
	CATGCTTGCCTTAGAGGACA+TGG	+	chr7_2:75744462-75744481	None:intergenic	50.0%
!!	CATGTCCTCTAAGGCAAGCA+TGG	-	chr7_2:75744460-75744479	Msa1077180:CDS	50.0%
!!	TGTCCTCTAAGGCAAGCATG+GGG	-	chr7_2:75744462-75744481	Msa1077180:CDS	50.0%
	GGAAGCCTTGATGCACTCAT+AGG	-	chr7_2:75744483-75744502	Msa1077180:CDS	50.0%
	GACGACCTATGAGTGCATCA+AGG	+	chr7_2:75744491-75744510	None:intergenic	50.0%
	GAAGATCACGAACTTCGCGA+AGG	+	chr7_2:75744587-75744606	None:intergenic	50.0%
	CAGTAGGTTTGGATGGAGAC+AGG	+	chr7_2:75743181-75743200	None:intergenic	50.0%
	CTTTGCGCTTTGCAGATCCA+AGG	+	chr7_2:75743666-75743685	None:intergenic	50.0%
	CTTGGATCTGCAAAGCGCAA+AGG	-	chr7_2:75743664-75743683	Msa1077180:three_prime_UTR	50.0%
	GATGGTTGAAGCTGCAGATG+AGG	+	chr7_2:75743869-75743888	None:intergenic	50.0%
	TCATAGCGGCTGCTACTGTT+GGG	+	chr7_2:75743901-75743920	None:intergenic	50.0%
	AGAATCAGAAACGCCGTGAC+TGG	-	chr7_2:75743920-75743939	Msa1077180:CDS	50.0%
!!	GACCAAAGGTGTTCCAGTCA+CGG	+	chr7_2:75743936-75743955	None:intergenic	50.0%
	GAGGTGGACGATGATTCTTG+AGG	+	chr7_2:75743963-75743982	None:intergenic	50.0%
	GTCCACCTCTTTCCCTATCT+AGG	-	chr7_2:75743974-75743993	Msa1077180:CDS	50.0%
	CACCTAGATAGGGAAAGAGG+TGG	+	chr7_2:75743979-75743998	None:intergenic	50.0%
	CTGCACCTAGATAGGGAAAG+AGG	+	chr7_2:75743982-75744001	None:intergenic	50.0%
	CTTTCCCTATCTAGGTGCAG+CGG	-	chr7_2:75743982-75744001	Msa1077180:CDS	50.0%
	CACCATGTCCATGTCCTCTA+AGG	-	chr7_2:75744451-75744470	Msa1077180:intron	50.0%
	TGCCTTAGAGGACATGGACA+TGG	+	chr7_2:75744456-75744475	None:intergenic	50.0%
	CATGCTTGCCTTAGAGGACA+TGG	+	chr7_2:75744462-75744481	None:intergenic	50.0%
!!	CATGTCCTCTAAGGCAAGCA+TGG	-	chr7_2:75744460-75744479	Msa1077180:CDS	50.0%
!!	TGTCCTCTAAGGCAAGCATG+GGG	-	chr7_2:75744462-75744481	Msa1077180:CDS	50.0%
	GGAAGCCTTGATGCACTCAT+AGG	-	chr7_2:75744483-75744502	Msa1077180:CDS	50.0%
	GACGACCTATGAGTGCATCA+AGG	+	chr7_2:75744491-75744510	None:intergenic	50.0%
	GAAGATCACGAACTTCGCGA+AGG	+	chr7_2:75744587-75744606	None:intergenic	50.0%
	CTCATAGCGGCTGCTACTGT+TGG	+	chr7_2:75743902-75743921	None:intergenic	55.0%
	TGCACCGCTGCACCTAGATA+GGG	+	chr7_2:75743989-75744008	None:intergenic	55.0%
!!	GGACATGGTGCTGGTGGATT+TGG	+	chr7_2:75744441-75744460	None:intergenic	55.0%
	AGAGGACATGGACATGGTGC+TGG	+	chr7_2:75744450-75744469	None:intergenic	55.0%
	CTTCCCCATGCTTGCCTTAG+AGG	+	chr7_2:75744468-75744487	None:intergenic	55.0%
	CTCACAGCTCGAGCACCAAA+AGG	+	chr7_2:75744558-75744577	None:intergenic	55.0%
!!!	CTTTTGGTGCTCGAGCTGTG+AGG	-	chr7_2:75744556-75744575	Msa1077180:CDS	55.0%
	CAAGTTCCACCACCAGCACA+AGG	-	chr7_2:75744672-75744691	Msa1077180:CDS	55.0%
	GTTGCACTTGCACCTTGTGC+TGG	+	chr7_2:75744687-75744706	None:intergenic	55.0%
	CTCATAGCGGCTGCTACTGT+TGG	+	chr7_2:75743902-75743921	None:intergenic	55.0%
	TGCACCGCTGCACCTAGATA+GGG	+	chr7_2:75743989-75744008	None:intergenic	55.0%
!!	GGACATGGTGCTGGTGGATT+TGG	+	chr7_2:75744441-75744460	None:intergenic	55.0%
	AGAGGACATGGACATGGTGC+TGG	+	chr7_2:75744450-75744469	None:intergenic	55.0%
	CTTCCCCATGCTTGCCTTAG+AGG	+	chr7_2:75744468-75744487	None:intergenic	55.0%
	CTCACAGCTCGAGCACCAAA+AGG	+	chr7_2:75744558-75744577	None:intergenic	55.0%
!!!	CTTTTGGTGCTCGAGCTGTG+AGG	-	chr7_2:75744556-75744575	Msa1077180:CDS	55.0%
	CAAGTTCCACCACCAGCACA+AGG	-	chr7_2:75744672-75744691	Msa1077180:CDS	55.0%
	GTTGCACTTGCACCTTGTGC+TGG	+	chr7_2:75744687-75744706	None:intergenic	55.0%
	CGCCGTGACTGGAACACCTT+TGG	-	chr7_2:75743931-75743950	Msa1077180:CDS	60.0%
	GTGCACCGCTGCACCTAGAT+AGG	+	chr7_2:75743990-75744009	None:intergenic	60.0%
!	GGACATGGACATGGTGCTGG+TGG	+	chr7_2:75744447-75744466	None:intergenic	60.0%
!	CTTGCACCTTGTGCTGGTGG+TGG	+	chr7_2:75744681-75744700	None:intergenic	60.0%
	GCACTTGCACCTTGTGCTGG+TGG	+	chr7_2:75744684-75744703	None:intergenic	60.0%
	CGCCGTGACTGGAACACCTT+TGG	-	chr7_2:75743931-75743950	Msa1077180:CDS	60.0%
	GTGCACCGCTGCACCTAGAT+AGG	+	chr7_2:75743990-75744009	None:intergenic	60.0%
!	GGACATGGACATGGTGCTGG+TGG	+	chr7_2:75744447-75744466	None:intergenic	60.0%
!	CTTGCACCTTGTGCTGGTGG+TGG	+	chr7_2:75744681-75744700	None:intergenic	60.0%
	GCACTTGCACCTTGTGCTGG+TGG	+	chr7_2:75744684-75744703	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	75743172	75745316	75743172	ID=Msa1077180;Name=Msa1077180
chr7_2	mRNA	75743172	75745316	75743172	ID=Msa1077180-mRNA-1;Parent=Msa1077180;Name=Msa1077180-mRNA-1;_AED=0.03;_eAED=0.03;_QI=465\|1\|1\|1\|0.5\|0.33\|3\|603\|213
chr7_2	exon	75743172	75744111	75743172	ID=Msa1077180-mRNA-1:exon:18124;Parent=Msa1077180-mRNA-1
chr7_2	exon	75744460	75744898	75744460	ID=Msa1077180-mRNA-1:exon:18123;Parent=Msa1077180-mRNA-1
chr7_2	exon	75744986	75745316	75744986	ID=Msa1077180-mRNA-1:exon:18122;Parent=Msa1077180-mRNA-1
chr7_2	five_prime_UTR	75744986	75745316	75744986	ID=Msa1077180-mRNA-1:five_prime_utr;Parent=Msa1077180-mRNA-1
chr7_2	five_prime_UTR	75744765	75744898	75744765	ID=Msa1077180-mRNA-1:five_prime_utr;Parent=Msa1077180-mRNA-1
chr7_2	CDS	75744460	75744764	75744460	ID=Msa1077180-mRNA-1:cds;Parent=Msa1077180-mRNA-1
chr7_2	CDS	75743775	75744111	75743775	ID=Msa1077180-mRNA-1:cds;Parent=Msa1077180-mRNA-1
chr7_2	three_prime_UTR	75743172	75743774	75743172	ID=Msa1077180-mRNA-1:three_prime_utr;Parent=Msa1077180-mRNA-1

Gene Sequence

>Msa1077180

ATGGATTCAATTCAAGAATTTATAGGGGCATGTAACAATGAAAACATGACCTGCAACTTCATGAATAACAACAACAACAACACTATAAGTACAACCACAACAAGCTTAACAACAACAACTACTACAGCAAGTGGAAGCTCTTCCTCATCTGCAGCTTCAACCATCATCAACAGTCCCAACAGTAGCAGCCGCTATGAGAATCAGAAACGCCGTGACTGGAACACCTTTGGTCAGTACCTCAAGAATCATCGTCCACCTCTTTCCCTATCTAGGTGCAGCGGTGCACATGTTCTTGAATTTCTAAGGTATTTGGATCAATTTGGGAAGACAAAAGTTCACACACCAATTTGTCCATTTTATGGGCATCCAAATCCACCAGCACCATGTCCATGTCCTCTAAGGCAAGCATGGGGAAGCCTTGATGCACTCATAGGTCGTCTTCGTGCTGCTTTTGAAGAAAATGGAGGAAAACCAGAAACAAATCCTTTTGGTGCTCGAGCTGTGAGGCTCTACCTTCGCGAAGTTCGTGATCTTCAATCAAAAGCAAGAGGTATTAGTTACGAGAAGAAGAAAAGAAAGCGTCCACCACCACAACAACAACAAGTTCCACCACCAGCACAAGGTGCAAGTGCAACTCATTAG

Protein sequence

>Msa1077180

MDSIQEFIGACNNENMTCNFMNNNNNNTISTTTTSLTTTTTTASGSSSSSAASTIINSPNSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQQVPPPAQGASATH*