AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0835530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0835530 MtrunA17_Chr5g0401471 96.868 447 14 0 1 447 1 447 0.0 893
Msa0835530 MtrunA17_Chr3g0127341 26.273 373 243 6 47 394 32 397 4.18e-31 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0835530 AT2G23093.1 57.366 448 189 2 1 446 1 448 1.95e-175 499
Msa0835530 AT2G23093.2 56.693 381 164 1 67 446 1 381 2.48e-154 442
Msa0835530 AT3G49310.1 26.738 374 240 8 47 394 32 397 4.80e-31 124
Msa0835530 AT4G27720.1 27.446 368 245 8 47 394 32 397 5.00e-31 124
Msa0835530 AT1G64650.1 26.133 375 241 9 47 394 32 397 1.16e-29 120
Msa0835530 AT1G64650.2 25.217 345 222 9 77 394 21 356 8.22e-25 106

Find 133 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTCCTTGTATTTGCTTA+TGG 0.135016 5_4:+8924275 Msa0835530:three_prime_UTR
AAAATTGAATCTTATAATTT+AGG 0.177458 5_4:+8924395 Msa0835530:three_prime_UTR
ATGTCTACCATTTCAAATTA+TGG 0.183708 5_4:+8924204 Msa0835530:three_prime_UTR
GTTGCTTCCCGCATTGCTTC+AGG 0.261910 5_4:-8923866 None:intergenic
CCAGCCAAATGTTTGCAAAT+TGG 0.264132 5_4:+8920404 Msa0835530:CDS
CTCTTTGCTGCTCCTTTCCT+TGG 0.267320 5_4:+8919424 Msa0835530:CDS
TTCAAATTATGGAAGACTAA+TGG 0.276075 5_4:+8924215 Msa0835530:three_prime_UTR
ATGCTGAACTGGACTGTTAT+TGG 0.288346 5_4:+8924090 Msa0835530:three_prime_UTR
TCCTTAAAAGATGTTGTTCC+TGG 0.294041 5_4:-8920529 None:intergenic
TGTTTATGCCAGTTGTTATA+AGG 0.297915 5_4:-8923888 None:intergenic
TCAAATTATGGAAGACTAAT+GGG 0.301722 5_4:+8924216 Msa0835530:three_prime_UTR
GTCGTTTATTCTCTCGCTTC+AGG 0.308569 5_4:+8916794 Msa0835530:CDS
TTGGCTGATTGGTAATAATA+TGG 0.309041 5_4:+8920423 Msa0835530:CDS
GAAGGTCTATGGTCAGTGTT+TGG 0.318081 5_4:+8919325 Msa0835530:CDS
AAGGATTAGTCAGGTGTTAT+AGG 0.331289 5_4:-8924489 None:intergenic
AGCAGAATTGCAGCATTTGC+AGG 0.333144 5_4:-8922341 None:intergenic
AAGGTCTATGGTCAGTGTTT+GGG 0.339402 5_4:+8919326 Msa0835530:CDS
ATTTGTAATCCACAGATAAA+AGG 0.342774 5_4:+8921469 Msa0835530:intron
TGCTGAACTGGACTGTTATT+GGG 0.343647 5_4:+8924091 Msa0835530:three_prime_UTR
TACACTTATTTGTTGGTGTA+TGG 0.346030 5_4:+8920073 Msa0835530:CDS
AAGATGAATATGAAAATTGA+TGG 0.369464 5_4:-8916659 None:intergenic
TGCATCCTACACTTATTTGT+TGG 0.371176 5_4:+8920066 Msa0835530:CDS
AAATAACTACTCTTCCTAAT+AGG 0.374997 5_4:-8924681 None:intergenic
CTTACGGTGGGAAGTTTCTC+TGG 0.375342 5_4:+8924347 Msa0835530:three_prime_UTR
ACTCACTCAATGACACATAT+TGG 0.377170 5_4:+8920347 Msa0835530:CDS
CTAATGGCGTTTGGTGCGTT+TGG 0.378871 5_4:+8923813 Msa0835530:CDS
TCAGCCAATTTGCAAACATT+TGG 0.387709 5_4:-8920408 None:intergenic
TATTGTGGCCTATGACTATC+AGG 0.395025 5_4:+8922012 Msa0835530:CDS
AATCCACAGATAAAAGGATA+TGG 0.398080 5_4:+8921475 Msa0835530:intron
TCTCAGTTGTGGAAGGTCTA+TGG 0.398191 5_4:+8919314 Msa0835530:intron
AGTATCTGCATACATCATAT+TGG 0.405206 5_4:+8921976 Msa0835530:CDS
GGTTATTGAAAGTTCCATTT+GGG 0.406069 5_4:+8916628 Msa0835530:CDS
TGTTGAAAATGCAACTCTAA+TGG 0.408255 5_4:+8923797 Msa0835530:CDS
GACTAGCATATGTCTCTCTA+TGG 0.409205 5_4:+8920128 Msa0835530:CDS
ATGATCATGTCTCTCTGTTA+TGG 0.412961 5_4:+8919388 Msa0835530:CDS
TCAATCCTAATTGCACTTCT+CGG 0.421978 5_4:-8921859 None:intergenic
TGGGGTTTCTGTCCATCCTC+TGG 0.424478 5_4:-8920509 None:intergenic
CTCATCGATCAAATCTATCT+AGG 0.428161 5_4:+8916523 Msa0835530:five_prime_UTR
TGTGCAGGAAATTGGAGTTC+TGG 0.428849 5_4:+8922124 Msa0835530:intron
TGGTTATTGAAAGTTCCATT+TGG 0.435947 5_4:+8916627 Msa0835530:CDS
GACGGCCGAGAAGTGCAATT+AGG 0.440184 5_4:+8921854 Msa0835530:CDS
ATCCCTCCACGCAATTCATT+AGG 0.444478 5_4:-8922299 None:intergenic
CCAATTTGCAAACATTTGGC+TGG 0.445903 5_4:-8920404 None:intergenic
TTGCTTCCCGCATTGCTTCA+GGG 0.446622 5_4:-8923865 None:intergenic
TTTGGTTTGTTGTTAGCAGC+TGG 0.450217 5_4:+8923831 Msa0835530:CDS
ATGTTTGCAAATTGGCTGAT+TGG 0.450918 5_4:+8920412 Msa0835530:CDS
TGAATTGCGTGGAGGGATGA+TGG 0.453095 5_4:+8922304 Msa0835530:CDS
TGATGGATTCAGTTCCCAAA+TGG 0.453810 5_4:-8916642 None:intergenic
CTCCTTGTATTTGCTTATGG+AGG 0.457982 5_4:+8924278 Msa0835530:three_prime_UTR
TTATTGGGGTACTTTCTGTA+AGG 0.459942 5_4:+8924106 Msa0835530:three_prime_UTR
TACCATCTCTCGCTAGATTG+AGG 0.461268 5_4:+8922189 Msa0835530:CDS
ACTGAATGAGAATATTGTAT+TGG 0.462102 5_4:-8920151 None:intergenic
GGAAGCAACCTTATAACAAC+TGG 0.462144 5_4:+8923880 Msa0835530:CDS
TTTGCAGGATTTGGTAGTAG+TGG 0.464947 5_4:+8923937 Msa0835530:three_prime_UTR
TCGGTCTCTCTCGTACACTC+TGG 0.466427 5_4:+8923963 Msa0835530:three_prime_UTR
TAGTCTTCCATAATTTGAAA+TGG 0.468502 5_4:-8924211 None:intergenic
GAATGGAAGTAACAATATAT+CGG 0.470375 5_4:-8924251 None:intergenic
TAACTGCACCTGATAGTCAT+AGG 0.472242 5_4:-8922020 None:intergenic
TAGCTTCACATGGATTTGAC+AGG 0.474347 5_4:+8919359 Msa0835530:CDS
TGTGCTTGTATTATACCAAA+AGG 0.474384 5_4:+8924606 Msa0835530:intron
TAGCGTCACTAATGTGAGTT+GGG 0.474918 5_4:+8924424 Msa0835530:three_prime_UTR
TCATAACTTGTTAGCATGCA+AGG 0.476886 5_4:-8924508 None:intergenic
AGCTTGTTTCATGCTTGCGT+TGG 0.478452 5_4:+8922158 Msa0835530:CDS
AAACTATATAAAACGCCAAT+GGG 0.480732 5_4:+8916602 Msa0835530:exon
GGCTGCTCTCTTGTCTATTG+TGG 0.481167 5_4:+8921997 Msa0835530:CDS
TTAGCATGCAAGGATTAGTC+AGG 0.482075 5_4:-8924498 None:intergenic
CCTTAAAAGATGTTGTTCCT+GGG 0.487468 5_4:-8920528 None:intergenic
GAATTGCGTGGAGGGATGAT+GGG 0.487759 5_4:+8922305 Msa0835530:CDS
ACTTCCACAATCTTCGATCA+TGG 0.489570 5_4:+8916731 Msa0835530:CDS
ACTAGCCTTCACTTCTCCAT+TGG 0.490301 5_4:+8921516 Msa0835530:CDS
ACTACCAAATCCTGCAAAAG+AGG 0.492381 5_4:-8923932 None:intergenic
TGCATGCCCTGAAGCAATGC+GGG 0.495373 5_4:+8923859 Msa0835530:CDS
AACGGTTTAAAATGAAGAAT+AGG 0.499534 5_4:-8916453 None:intergenic
CCGCTATCACAATCTGCTTA+CGG 0.506670 5_4:+8924331 Msa0835530:three_prime_UTR
AAAGGATATGGCTGTTGACA+TGG 0.510167 5_4:+8921487 Msa0835530:CDS
CAAATACAAGGAGAAAAGAA+TGG 0.513543 5_4:-8924268 None:intergenic
ATATAAAACGCCAATGGGAG+TGG 0.515681 5_4:+8916607 Msa0835530:exon
AGGTCTATGGTCAGTGTTTG+GGG 0.515737 5_4:+8919327 Msa0835530:CDS
TCCTCAATTCTAAGTGATGA+TGG 0.517356 5_4:-8921947 None:intergenic
CGGTCTCTCTCGTACACTCT+GGG 0.524836 5_4:+8923964 Msa0835530:three_prime_UTR
CTTTCAATAACCACTCCCAT+TGG 0.528891 5_4:-8916617 None:intergenic
AATGCAACTCTAATGGCGTT+TGG 0.530190 5_4:+8923804 Msa0835530:CDS
AAAACTATATAAAACGCCAA+TGG 0.533569 5_4:+8916601 Msa0835530:exon
ATATGATGTATGCAGATACT+AGG 0.534600 5_4:-8921973 None:intergenic
CTTAAAAGATGTTGTTCCTG+GGG 0.539968 5_4:-8920527 None:intergenic
GCAGAATTGCAGCATTTGCA+GGG 0.540236 5_4:-8922340 None:intergenic
TTAGCGTCACTAATGTGAGT+TGG 0.541998 5_4:+8924423 Msa0835530:three_prime_UTR
TCAAAACTTGCAACCGTGGT+AGG 0.550096 5_4:+8924558 Msa0835530:three_prime_UTR
AACTTAGATGATGAAAATGC+AGG 0.550803 5_4:+8923999 Msa0835530:three_prime_UTR
GTTGCAATGGAGAAGCAAAA+CGG 0.553279 5_4:-8916471 None:intergenic
AAACGACGAGAAAGTTGCGT+TGG 0.557149 5_4:-8916778 None:intergenic
ACATGAAGTAGAAGAGAACT+TGG 0.561104 5_4:-8924185 None:intergenic
AAAGTCCAATGGAGAAGTGA+AGG 0.567421 5_4:-8921521 None:intergenic
ACCATCATCACTTAGAATTG+AGG 0.570229 5_4:+8921946 Msa0835530:CDS
ATCCTCCATAAGCAAATACA+AGG 0.570622 5_4:-8924280 None:intergenic
GCAGTAACTTCTCGTTGCAA+TGG 0.573932 5_4:-8916484 None:intergenic
CGATCAAATCTATCTAGGAT+CGG 0.580568 5_4:+8916528 Msa0835530:five_prime_UTR
GCTGAACTGGACTGTTATTG+GGG 0.580799 5_4:+8924092 Msa0835530:three_prime_UTR
TCTGAAAGCATGCCAAGGAA+AGG 0.587166 5_4:-8919436 None:intergenic
TTTGTCTGCAGCAAGGACAC+AGG 0.590139 5_4:+8920320 Msa0835530:intron
TGCTAAGAAGATGACAGCAA+AGG 0.590964 5_4:-8920464 None:intergenic
GATGGTCATTCAACATGAGA+AGG 0.592262 5_4:+8920185 Msa0835530:CDS
TACCTAATGAATTGCGTGGA+GGG 0.592665 5_4:+8922297 Msa0835530:CDS
GATTCCATGATCGAAGATTG+TGG 0.594051 5_4:-8916735 None:intergenic
GTCCTCAATCTAGCGAGAGA+TGG 0.595439 5_4:-8922191 None:intergenic
ATGCTAGTCATGAAAATGCT+TGG 0.598980 5_4:-8920114 None:intergenic
GAGTATGAGTTAGCTTCACA+TGG 0.600211 5_4:+8919349 Msa0835530:CDS
AGCTTCACATGGATTTGACA+GGG 0.605174 5_4:+8919360 Msa0835530:CDS
CCGTAAGCAGATTGTGATAG+CGG 0.606373 5_4:-8924331 None:intergenic
TGATATCATACCACCACGGT+AGG 0.606528 5_4:-8921561 None:intergenic
CTACCAAATCCTGCAAAAGA+GGG 0.609921 5_4:-8923931 None:intergenic
CAGAATTGCAGCATTTGCAG+GGG 0.618123 5_4:-8922339 None:intergenic
AAGAAGATGACAGCAAAGGA+AGG 0.620765 5_4:-8920460 None:intergenic
ATACACCAACAAATAAGTGT+AGG 0.623461 5_4:-8920071 None:intergenic
TATGTACCTAATGAATTGCG+TGG 0.625396 5_4:+8922293 Msa0835530:CDS
GGTGTCAAAACTTGCAACCG+TGG 0.626915 5_4:+8924554 Msa0835530:three_prime_UTR
AGAGGATGGACAGAAACCCC+AGG 0.628196 5_4:+8920511 Msa0835530:CDS
AAGGATATGGCTGTTGACAT+GGG 0.631029 5_4:+8921488 Msa0835530:CDS
TATCACAATCTGCTTACGGT+GGG 0.632031 5_4:+8924335 Msa0835530:three_prime_UTR
AAATCTATCTAGGATCGGAA+CGG 0.635399 5_4:+8916533 Msa0835530:five_prime_UTR
AATTGCGTGGAGGGATGATG+GGG 0.638126 5_4:+8922306 Msa0835530:CDS
GAAGTTCTGTTAGCAGCATG+AGG 0.641718 5_4:-8916713 None:intergenic
GATGACAGCAAAGGAAGGAA+CGG 0.645657 5_4:-8920455 None:intergenic
TCAAATCTGAAAGCATGCCA+AGG 0.645843 5_4:-8919441 None:intergenic
GATTTGGTAGTAGTGGATGT+CGG 0.650181 5_4:+8923944 Msa0835530:three_prime_UTR
CTATCACAATCTGCTTACGG+TGG 0.650370 5_4:+8924334 Msa0835530:three_prime_UTR
GATGCTTTGGGCACCTACCG+TGG 0.655346 5_4:+8921548 Msa0835530:CDS
AAATGCACATGAAGATCACA+AGG 0.672515 5_4:+8924370 Msa0835530:three_prime_UTR
GCTTTGGGCACCTACCGTGG+TGG 0.677361 5_4:+8921551 Msa0835530:CDS
GTACCTAATGAATTGCGTGG+AGG 0.679478 5_4:+8922296 Msa0835530:CDS
TATACTAATACTAATACACT+AGG 0.681749 5_4:-8924465 None:intergenic
GATGGTCCACTAGTGAGACA+CGG 0.724193 5_4:-8921929 None:intergenic
ATGCATGCCCTGAAGCAATG+CGG 0.738358 5_4:+8923858 Msa0835530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTGAAAATAGTAATTA+AGG + chr5_4:8918512-8918531 Msa0835530:intron 10.0%
!!! AATTTCCATTTTATTTTAAT+TGG + chr5_4:8918754-8918773 Msa0835530:intron 10.0%
!! TATATTGTTTCATAAATATA+TGG + chr5_4:8920990-8921009 Msa0835530:intron 10.0%
!! ATAAATATATGGTTAATATA+TGG + chr5_4:8921001-8921020 Msa0835530:intron 10.0%
!! TATAATAATAATAATACACT+AGG + chr5_4:8921372-8921391 Msa0835530:intron 10.0%
!! TAATAAATACTAAATAACTT+AGG - chr5_4:8923258-8923277 None:intergenic 10.0%
!! AAAATTGAATCTTATAATTT+AGG + chr5_4:8924395-8924414 Msa0835530:three_prime_UTR 10.0%
!!! AAAAAAAAAAAAGGTTTTTA+TGG + chr5_4:8924533-8924552 Msa0835530:three_prime_UTR 10.0%
!!! TTTTGAATTTCTTTTGTTTA+TGG + chr5_4:8917177-8917196 Msa0835530:intron 15.0%
!!! TTCTTTAATTTAAAACAGTT+AGG + chr5_4:8917442-8917461 Msa0835530:intron 15.0%
!!! GATTTTAAATTTCTTGTTTA+TGG + chr5_4:8917495-8917514 Msa0835530:intron 15.0%
!! TAATCAGAAAATAGTAATTA+AGG - chr5_4:8917736-8917755 None:intergenic 15.0%
!! AAAATGCTTAGAAATTAAAT+GGG - chr5_4:8917796-8917815 None:intergenic 15.0%
!! AAAAATGCTTAGAAATTAAA+TGG - chr5_4:8917797-8917816 None:intergenic 15.0%
!! GAATTACAAAAACATAATTA+GGG - chr5_4:8919514-8919533 None:intergenic 15.0%
!! TGAATTACAAAAACATAATT+AGG - chr5_4:8919515-8919534 None:intergenic 15.0%
!!! TTAATTATTTTATGTTGTAG+TGG + chr5_4:8919581-8919600 Msa0835530:intron 15.0%
!!! GATGTATTTTATGTTAATTT+TGG + chr5_4:8919687-8919706 Msa0835530:intron 15.0%
!! ATAAAATCATCCTTAAAATT+TGG - chr5_4:8919783-8919802 None:intergenic 15.0%
!!! TGAGTAAAGATAATTTTTTA+AGG + chr5_4:8922483-8922502 Msa0835530:intron 15.0%
!! AAGATGAATATGAAAATTGA+TGG - chr5_4:8916662-8916681 None:intergenic 20.0%
!! TGAGTTTATATAGTTTATAG+AGG + chr5_4:8916956-8916975 Msa0835530:intron 20.0%
!!! GTATTATTTTTGAATCTGTT+AGG + chr5_4:8917271-8917290 Msa0835530:intron 20.0%
!!! TACTCAATTAAGTTTTAGAT+CGG + chr5_4:8917368-8917387 Msa0835530:intron 20.0%
!!! AAGAAATTTAAAATCCAATC+TGG - chr5_4:8917490-8917509 None:intergenic 20.0%
!!! TTTAAATTTCTTGTTTATGG+AGG + chr5_4:8917498-8917517 Msa0835530:intron 20.0%
!! TTTCAGAAAAAAAACTTACT+TGG - chr5_4:8918072-8918091 None:intergenic 20.0%
!! AAAAATGCTTAGAAGTTAAA+TGG + chr5_4:8918440-8918459 Msa0835530:intron 20.0%
!! AAAATGCTTAGAAGTTAAAT+GGG + chr5_4:8918441-8918460 Msa0835530:intron 20.0%
!! TTTGGCCAATTAAAATAAAA+TGG - chr5_4:8918762-8918781 None:intergenic 20.0%
!! TCAAACTAAAATCAAAACTT+TGG - chr5_4:8918780-8918799 None:intergenic 20.0%
!! CGTCAAAAATTGAAAAATAT+AGG - chr5_4:8918896-8918915 None:intergenic 20.0%
!! TTTCTAAATCTGTTATGATT+TGG + chr5_4:8919003-8919022 Msa0835530:intron 20.0%
!!! TTTTCAATTGAGTTTTAGAT+CGG + chr5_4:8919046-8919065 Msa0835530:intron 20.0%
!!! TGTATATTGTTTTTCTAAAG+CGG + chr5_4:8919168-8919187 Msa0835530:intron 20.0%
!!! GTATTTTATGTTAATTTTGG+TGG + chr5_4:8919690-8919709 Msa0835530:intron 20.0%
!!! GATATTTGAGATGATTATTA+TGG + chr5_4:8919712-8919731 Msa0835530:intron 20.0%
!! AACATTGAAAAGTAATACAT+AGG - chr5_4:8919825-8919844 None:intergenic 20.0%
!!! AAAAACTTCAAAACTTCTTT+TGG - chr5_4:8919979-8919998 None:intergenic 20.0%
!! AAAGAAATAAAATCTGAATC+AGG - chr5_4:8920270-8920289 None:intergenic 20.0%
!!! TCCTTCTATACATATATTTT+TGG + chr5_4:8920562-8920581 Msa0835530:CDS 20.0%
!! ACCAAAAATATATGTATAGA+AGG - chr5_4:8920566-8920585 None:intergenic 20.0%
!!! TTCTATACATATATTTTTGG+TGG + chr5_4:8920565-8920584 Msa0835530:CDS 20.0%
!! AAATAGGTAGAAAATAATGA+AGG - chr5_4:8920869-8920888 None:intergenic 20.0%
!! TTGTTCAACTGTATTAAATT+TGG + chr5_4:8921117-8921136 Msa0835530:intron 20.0%
!! TGTATTAAATTTGGATCTAA+TGG + chr5_4:8921126-8921145 Msa0835530:intron 20.0%
!!! ATATTTGAAACAATTTGTTC+AGG + chr5_4:8921635-8921654 Msa0835530:intron 20.0%
!! TATTCAAAAAGATTCAATCA+TGG - chr5_4:8921753-8921772 None:intergenic 20.0%
!!! AAAAGTCTCAAATATACTTT+TGG + chr5_4:8922055-8922074 Msa0835530:intron 20.0%
!!! AAACGTATAATTATCCATTT+TGG + chr5_4:8922425-8922444 Msa0835530:intron 20.0%
!! TTATCTTTACTCATATGATA+TGG - chr5_4:8922476-8922495 None:intergenic 20.0%
!! ATGTAAATAATTTATCAAGC+TGG + chr5_4:8922655-8922674 Msa0835530:intron 20.0%
!!! AATCCATAGAATGATATTTT+AGG + chr5_4:8922792-8922811 Msa0835530:intron 20.0%
!! AATCACTATTTCAAAAAAGA+TGG - chr5_4:8922895-8922914 None:intergenic 20.0%
!!! TTTTGTTTTGTTTTCTCTTT+TGG + chr5_4:8923583-8923602 Msa0835530:intron 20.0%
!!! TCACATTTTAATTCATTCTT+TGG + chr5_4:8924147-8924166 Msa0835530:three_prime_UTR 20.0%
!! TATACTAATACTAATACACT+AGG - chr5_4:8924468-8924487 None:intergenic 20.0%
!! GTTATGAGCAAAAAAAAAAA+AGG + chr5_4:8924524-8924543 Msa0835530:three_prime_UTR 20.0%
!!! TTAATGTTTTTTCACCTATT+AGG + chr5_4:8924667-8924686 Msa0835530:three_prime_UTR 20.0%
!! AACGGTTTAAAATGAAGAAT+AGG - chr5_4:8916456-8916475 None:intergenic 25.0%
! AAAACTATATAAAACGCCAA+TGG + chr5_4:8916601-8916620 Msa0835530:exon 25.0%
! AAACTATATAAAACGCCAAT+GGG + chr5_4:8916602-8916621 Msa0835530:exon 25.0%
!! TTCTAGAAAATGTGATAGAT+CGG + chr5_4:8916851-8916870 Msa0835530:intron 25.0%
!! CGGAATCTTTTAATCATTTT+AGG + chr5_4:8916871-8916890 Msa0835530:intron 25.0%
! TTCTTCAACTTAATACTGAT+AGG + chr5_4:8917120-8917139 Msa0835530:intron 25.0%
!!! ATTTCTTTTGTTTATGGAGA+TGG + chr5_4:8917183-8917202 Msa0835530:intron 25.0%
!! TTTTTGAATCTGTTAGGTTT+TGG + chr5_4:8917277-8917296 Msa0835530:intron 25.0%
!! ATGTTGAATTCAATTTTGCT+TGG + chr5_4:8917307-8917326 Msa0835530:intron 25.0%
!! CTGAATGTTGAATTCAATTT+TGG + chr5_4:8917303-8917322 Msa0835530:intron 25.0%
!! ATGATTTAGTCGTATTTTTC+AGG + chr5_4:8917410-8917429 Msa0835530:intron 25.0%
! AGAAAATAGTAATTAAGGAG+AGG - chr5_4:8917731-8917750 None:intergenic 25.0%
! AGTTTGTATCCTTTATATAG+TGG - chr5_4:8917915-8917934 None:intergenic 25.0%
! TTATGTCTGAATAGTAAACA+AGG + chr5_4:8918126-8918145 Msa0835530:intron 25.0%
! TATGTCTGAATAGTAAACAA+GGG + chr5_4:8918127-8918146 Msa0835530:intron 25.0%
!! TTTTCAGAAAGAAACTTACT+TGG + chr5_4:8918166-8918185 Msa0835530:intron 25.0%
!! TTTGCACACTAAAAGAATTT+TGG + chr5_4:8918398-8918417 Msa0835530:intron 25.0%
!! TTGCACACTAAAAGAATTTT+GGG + chr5_4:8918399-8918418 Msa0835530:intron 25.0%
! TGAAAATAGTAATTAAGGAG+AGG + chr5_4:8918517-8918536 Msa0835530:intron 25.0%
!! CAATGTGTTAAAGATTTTGT+TGG + chr5_4:8918700-8918719 Msa0835530:intron 25.0%
!!! AGTTAAGTTTTATAGATCGA+AGG + chr5_4:8919246-8919265 Msa0835530:intron 25.0%
! AGGAACTTCATACTATAATT+TGG - chr5_4:8919617-8919636 None:intergenic 25.0%
!! TTTCAATGTTTCTATCACAT+TGG + chr5_4:8919835-8919854 Msa0835530:intron 25.0%
! ACTACTTTCTATATGTATAG+AGG + chr5_4:8920018-8920037 Msa0835530:intron 25.0%
! ACTGAATGAGAATATTGTAT+TGG - chr5_4:8920154-8920173 None:intergenic 25.0%
! TACTAGAGACATAAATCAAA+CGG - chr5_4:8920769-8920788 None:intergenic 25.0%
! AAATAATGAAGGAAAGAAAC+AGG - chr5_4:8920858-8920877 None:intergenic 25.0%
! ATTGAGAACCAAATATATCA+GGG - chr5_4:8920934-8920953 None:intergenic 25.0%
! AATTGAGAACCAAATATATC+AGG - chr5_4:8920935-8920954 None:intergenic 25.0%
! TAAAAGAATCTACTGGAAAA+TGG + chr5_4:8921063-8921082 Msa0835530:intron 25.0%
! ATAAAAAGATCACAAGCAAA+TGG - chr5_4:8921237-8921256 None:intergenic 25.0%
! ATTTGTAATCCACAGATAAA+AGG + chr5_4:8921469-8921488 Msa0835530:intron 25.0%
! TACAGTGTCTTCAATTTATT+TGG + chr5_4:8921609-8921628 Msa0835530:intron 25.0%
! TCTGAATTAAGTTCATTTCT+AGG - chr5_4:8921678-8921697 None:intergenic 25.0%
! ACTTAATTCAGAAACCAATA+AGG + chr5_4:8921686-8921705 Msa0835530:intron 25.0%
! CTTAATTCAGAAACCAATAA+GGG + chr5_4:8921687-8921706 Msa0835530:intron 25.0%
!! GTTGTTCAGTTCATTATTTT+AGG + chr5_4:8921715-8921734 Msa0835530:intron 25.0%
!! ATTGATATTTGCATGCTTTT+TGG + chr5_4:8921877-8921896 Msa0835530:CDS 25.0%
!!! TTGATATTTGCATGCTTTTT+GGG + chr5_4:8921878-8921897 Msa0835530:CDS 25.0%
!!! TTAGTCTTTTCTGAAATTGT+AGG + chr5_4:8922402-8922421 Msa0835530:intron 25.0%
! TCATGTTAATAATGCCAAAA+TGG - chr5_4:8922442-8922461 None:intergenic 25.0%
!!! TTAAGGTTTTGAAGTTAGAA+TGG + chr5_4:8922500-8922519 Msa0835530:intron 25.0%
!! AAGAATTTTCTATTCAAGAG+TGG + chr5_4:8922548-8922567 Msa0835530:intron 25.0%
! GCACAATAAGAATTTAAACA+AGG - chr5_4:8922620-8922639 None:intergenic 25.0%
! CTATAAGCTAATAAACTTCA+GGG - chr5_4:8922732-8922751 None:intergenic 25.0%
!! CTGAAGTTTATTAGCTTATA+GGG + chr5_4:8922731-8922750 Msa0835530:intron 25.0%
! ACACCTAAAATATCATTCTA+TGG - chr5_4:8922798-8922817 None:intergenic 25.0%
! TTTAGGTGTAAAATACCTTT+AGG + chr5_4:8922809-8922828 Msa0835530:intron 25.0%
! AAAGGAATGAAGAAGTAAAA+GGG - chr5_4:8923121-8923140 None:intergenic 25.0%
! AAAAGGAATGAAGAAGTAAA+AGG - chr5_4:8923122-8923141 None:intergenic 25.0%
!!! TGTTTCTTAGTTGTTTTTTC+TGG + chr5_4:8923218-8923237 Msa0835530:intron 25.0%
!!! GTTTTTAATTACACCCTTTT+TGG - chr5_4:8923462-8923481 None:intergenic 25.0%
! ATGTCTACCATTTCAAATTA+TGG + chr5_4:8924204-8924223 Msa0835530:three_prime_UTR 25.0%
! TAGTCTTCCATAATTTGAAA+TGG - chr5_4:8924214-8924233 None:intergenic 25.0%
! TTCAAATTATGGAAGACTAA+TGG + chr5_4:8924215-8924234 Msa0835530:three_prime_UTR 25.0%
! TCAAATTATGGAAGACTAAT+GGG + chr5_4:8924216-8924235 Msa0835530:three_prime_UTR 25.0%
! GAATGGAAGTAACAATATAT+CGG - chr5_4:8924254-8924273 None:intergenic 25.0%
!!! TTTTTTTACATTGCTCCTTT+TGG - chr5_4:8924624-8924643 None:intergenic 25.0%
! AAATAACTACTCTTCCTAAT+AGG - chr5_4:8924684-8924703 None:intergenic 25.0%
TGGTTATTGAAAGTTCCATT+TGG + chr5_4:8916627-8916646 Msa0835530:CDS 30.0%
GGTTATTGAAAGTTCCATTT+GGG + chr5_4:8916628-8916647 Msa0835530:CDS 30.0%
AACCTAACAGTTTCAAATTG+AGG - chr5_4:8916831-8916850 None:intergenic 30.0%
! TTCAATTTTACAGCACTGTT+AGG + chr5_4:8916906-8916925 Msa0835530:intron 30.0%
GAAAACAACGAATATTCATC+TGG - chr5_4:8917222-8917241 None:intergenic 30.0%
!!! TCAATTAAGTTTTAGATCGG+AGG + chr5_4:8917371-8917390 Msa0835530:intron 30.0%
!! ATTGGATACGATTGCTATTT+AGG - chr5_4:8917599-8917618 None:intergenic 30.0%
!!! TTCTAAGCATTTTTCAAGAC+TGG + chr5_4:8917803-8917822 Msa0835530:intron 30.0%
TTGCACACTACAAGAATTAT+GGG - chr5_4:8917838-8917857 None:intergenic 30.0%
TTTGCACACTACAAGAATTA+TGG - chr5_4:8917839-8917858 None:intergenic 30.0%
CTGAACAAACCACTATATAA+AGG + chr5_4:8917903-8917922 Msa0835530:intron 30.0%
!!! CTTACTTGGAATTTTTGAGT+TGG + chr5_4:8918180-8918199 Msa0835530:intron 30.0%
TGTTTGTATCCTCTATATAG+TGG + chr5_4:8918320-8918339 Msa0835530:intron 30.0%
! CAGAATTGGTAATTGTGAAT+AGG + chr5_4:8918358-8918377 Msa0835530:intron 30.0%
TAGTGTGCAAATTCAATTCA+CGG - chr5_4:8918389-8918408 None:intergenic 30.0%
!!! TTCTAAGCATTTTTCAAGAC+TGG - chr5_4:8917803-8917822 None:intergenic 30.0%
GAATATTCAGCTTAGTTACA+CGG - chr5_4:8919114-8919133 None:intergenic 30.0%
!!! TTTCTAAAGCGGTTATGTTT+TGG + chr5_4:8919179-8919198 Msa0835530:intron 30.0%
! AATTTCTGTTTTCTCAGTTG+TGG + chr5_4:8919303-8919322 Msa0835530:intron 30.0%
TAGTAATTCTTCCAAAAGGA+AGG - chr5_4:8919637-8919656 None:intergenic 30.0%
GTGTTAGTAATTCTTCCAAA+AGG - chr5_4:8919641-8919660 None:intergenic 30.0%
! CTGTGCATTTCCAAATTTTA+AGG + chr5_4:8919770-8919789 Msa0835530:intron 30.0%
ATACACCAACAAATAAGTGT+AGG - chr5_4:8920074-8920093 None:intergenic 30.0%
! TACACTTATTTGTTGGTGTA+TGG + chr5_4:8920073-8920092 Msa0835530:CDS 30.0%
CTGAATCAGGTTATTTAGTA+AGG - chr5_4:8920257-8920276 None:intergenic 30.0%
! TTGGCTGATTGGTAATAATA+TGG + chr5_4:8920423-8920442 Msa0835530:CDS 30.0%
CTGATTTCCAAAGAAATGTT+GGG - chr5_4:8920694-8920713 None:intergenic 30.0%
TCTGATTTCCAAAGAAATGT+TGG - chr5_4:8920695-8920714 None:intergenic 30.0%
!! TTGTAATTCTAGAACGTTCA+TGG - chr5_4:8920736-8920755 None:intergenic 30.0%
!!! GCTTTTATAACATTGACTCA+TGG - chr5_4:8920836-8920855 None:intergenic 30.0%
! AATTAGGAAAAGGAAAGCAT+GGG - chr5_4:8920893-8920912 None:intergenic 30.0%
AAATATATCAGGGATAGCAA+AGG - chr5_4:8920924-8920943 None:intergenic 30.0%
! TTTGCTATCCCTGATATATT+TGG + chr5_4:8920923-8920942 Msa0835530:intron 30.0%
CAACACAAGAAAGGAATTAA+TGG - chr5_4:8921031-8921050 None:intergenic 30.0%
AAATGGAAATACCATAAGAC+AGG + chr5_4:8921080-8921099 Msa0835530:intron 30.0%
! ACATTTTCATGCTGTCAAAA+AGG - chr5_4:8921163-8921182 None:intergenic 30.0%
ATAATACACTAGGTTAGATG+TGG + chr5_4:8921382-8921401 Msa0835530:intron 30.0%
AATCCACAGATAAAAGGATA+TGG + chr5_4:8921475-8921494 Msa0835530:intron 30.0%
!! ATTTTGATATCATACCACCA+CGG - chr5_4:8921568-8921587 None:intergenic 30.0%
TTTGTTCAGGATCTTTGTAT+TGG + chr5_4:8921648-8921667 Msa0835530:intron 30.0%
TGAACAACAAAATCCCTTAT+TGG - chr5_4:8921703-8921722 None:intergenic 30.0%
TCAAAAAGATTCAATCATGG+TGG - chr5_4:8921750-8921769 None:intergenic 30.0%
ACTGAAGCTGAAAATATAAC+AGG - chr5_4:8921796-8921815 None:intergenic 30.0%
! CTCTTAATGCATGTGATTTT+AGG + chr5_4:8921829-8921848 Msa0835530:intron 30.0%
ATATGATGTATGCAGATACT+AGG - chr5_4:8921976-8921995 None:intergenic 30.0%
AGTATCTGCATACATCATAT+TGG + chr5_4:8921976-8921995 Msa0835530:CDS 30.0%
! ATTTTTCATGTGCAGGAAAT+TGG + chr5_4:8922116-8922135 Msa0835530:intron 30.0%
CTCTTTGTAATGAGATTACA+TGG - chr5_4:8922216-8922235 None:intergenic 30.0%
! CTTCTTTGTTTGCTCAATAA+TGG + chr5_4:8922241-8922260 Msa0835530:intron 30.0%
! ATTTGAATTTCCTTGTTTGC+AGG + chr5_4:8922270-8922289 Msa0835530:intron 30.0%
ACAACGGAAGAATTTAAACA+GGG - chr5_4:8922574-8922593 None:intergenic 30.0%
AACAACGGAAGAATTTAAAC+AGG - chr5_4:8922575-8922594 None:intergenic 30.0%
!!! TCTGCTACTTTTACTAACAA+CGG - chr5_4:8922590-8922609 None:intergenic 30.0%
CCTATAAGCTAATAAACTTC+AGG - chr5_4:8922733-8922752 None:intergenic 30.0%
! CCTGAAGTTTATTAGCTTAT+AGG + chr5_4:8922730-8922749 Msa0835530:intron 30.0%
GGTGATATTGCATACATATT+AGG + chr5_4:8922752-8922771 Msa0835530:intron 30.0%
ACATATTAGGTTCACAAAGA+AGG + chr5_4:8922765-8922784 Msa0835530:intron 30.0%
CATATTAGGTTCACAAAGAA+GGG + chr5_4:8922766-8922785 Msa0835530:intron 30.0%
! ATTGTACTGTAGGATGATTT+TGG - chr5_4:8923015-8923034 None:intergenic 30.0%
GAACTCAAAAATTGTACTGT+AGG - chr5_4:8923025-8923044 None:intergenic 30.0%
!!! TTTTGAGTTCCATCATTTTG+AGG + chr5_4:8923035-8923054 Msa0835530:intron 30.0%
!! TTTGAGTTCCATCATTTTGA+GGG + chr5_4:8923036-8923055 Msa0835530:intron 30.0%
!!! TAGTTGTTTTTTCTGGTACA+AGG + chr5_4:8923225-8923244 Msa0835530:intron 30.0%
GCAAACAAATATTGAAGAGA+TGG - chr5_4:8923396-8923415 None:intergenic 30.0%
TTTGGATTCTTTGATGTAAC+TGG + chr5_4:8923601-8923620 Msa0835530:intron 30.0%
TGTTGAAAATGCAACTCTAA+TGG + chr5_4:8923797-8923816 Msa0835530:CDS 30.0%
TGTTTATGCCAGTTGTTATA+AGG - chr5_4:8923891-8923910 None:intergenic 30.0%
AACTTAGATGATGAAAATGC+AGG + chr5_4:8923999-8924018 Msa0835530:three_prime_UTR 30.0%
CAAATACAAGGAGAAAAGAA+TGG - chr5_4:8924271-8924290 None:intergenic 30.0%
TTTCTCCTTGTATTTGCTTA+TGG + chr5_4:8924275-8924294 Msa0835530:three_prime_UTR 30.0%
TGTGCTTGTATTATACCAAA+AGG + chr5_4:8924606-8924625 Msa0835530:intron 30.0%
CTCATCGATCAAATCTATCT+AGG + chr5_4:8916523-8916542 Msa0835530:five_prime_UTR 35.0%
! CGATCAAATCTATCTAGGAT+CGG + chr5_4:8916528-8916547 Msa0835530:five_prime_UTR 35.0%
! AAATCTATCTAGGATCGGAA+CGG + chr5_4:8916533-8916552 Msa0835530:five_prime_UTR 35.0%
! GTCCTCAATTTGAAACTGTT+AGG + chr5_4:8916826-8916845 Msa0835530:intron 35.0%
GGTTTAATCGAAAATGTGAG+AGG + chr5_4:8916927-8916946 Msa0835530:intron 35.0%
CTAGAATCTCTGTGTAACTT+AGG + chr5_4:8916985-8917004 Msa0835530:intron 35.0%
AAAATGTGAGAGATCCAGAT+TGG + chr5_4:8917473-8917492 Msa0835530:intron 35.0%
ACTCCTTCGATACATATAGA+CGG - chr5_4:8917635-8917654 None:intergenic 35.0%
AAAAAATTCCGATACGTTGC+CGG + chr5_4:8917687-8917706 Msa0835530:intron 35.0%
TAGTGTGCAAATTCAGTTCA+CGG + chr5_4:8917848-8917867 Msa0835530:intron 35.0%
! CAGAATTGGTAATTGTGAAC+AGG - chr5_4:8917879-8917898 None:intergenic 35.0%
GTTTGTTCAGACTTCAGAAT+TGG - chr5_4:8917893-8917912 None:intergenic 35.0%
!! TATCCACCTTTTGAAGGAAA+GGG + chr5_4:8917953-8917972 Msa0835530:intron 35.0%
! TTCTTCTTCTTTGACTGGTT+TGG - chr5_4:8917998-8918017 None:intergenic 35.0%
!!! CTTACTTGGAATTTTCGAGT+TGG - chr5_4:8918058-8918077 None:intergenic 35.0%
CTGAACAAACCACTATATAG+AGG - chr5_4:8918332-8918351 None:intergenic 35.0%
!! CTATATAGTGGTTTGTTCAG+AGG + chr5_4:8918332-8918351 Msa0835530:intron 35.0%
TTAAGGAGAGGAAAGCTAAA+CGG + chr5_4:8918529-8918548 Msa0835530:intron 35.0%
TCGTATCTGATACGTATTGA+AGG - chr5_4:8918631-8918650 None:intergenic 35.0%
ATACGATTCAGTGGCTATTT+AGG + chr5_4:8918645-8918664 Msa0835530:intron 35.0%
!!! ATTTTGTTGGCTTCTGAGTT+TGG + chr5_4:8918713-8918732 Msa0835530:intron 35.0%
! TTTTTGACGTATTGCCGTAT+CGG + chr5_4:8918907-8918926 Msa0835530:intron 35.0%
TAACAAAAACCTACGAAGCA+CGG - chr5_4:8918959-8918978 None:intergenic 35.0%
!!! TCAATTGAGTTTTAGATCGG+AGG + chr5_4:8919049-8919068 Msa0835530:intron 35.0%
ATGATCATGTCTCTCTGTTA+TGG + chr5_4:8919388-8919407 Msa0835530:CDS 35.0%
! AGTATGAAGTTCCTTCCTTT+TGG + chr5_4:8919623-8919642 Msa0835530:intron 35.0%
ATTTGGAAATGCACAGTTCT+TGG - chr5_4:8919766-8919785 None:intergenic 35.0%
CATTGTTTAGGTAGTACTTC+TGG - chr5_4:8919935-8919954 None:intergenic 35.0%
!! CTTTTGGAAAATGCATGTCT+TGG - chr5_4:8919963-8919982 None:intergenic 35.0%
TGCATCCTACACTTATTTGT+TGG + chr5_4:8920066-8920085 Msa0835530:CDS 35.0%
ATGCTAGTCATGAAAATGCT+TGG - chr5_4:8920117-8920136 None:intergenic 35.0%
!!! TCTCATTCAGTTTTGAGACT+TGG + chr5_4:8920163-8920182 Msa0835530:CDS 35.0%
!!! ATTCAGTTTTGAGACTTGGA+TGG + chr5_4:8920167-8920186 Msa0835530:CDS 35.0%
ACTCACTCAATGACACATAT+TGG + chr5_4:8920347-8920366 Msa0835530:CDS 35.0%
TCAGCCAATTTGCAAACATT+TGG - chr5_4:8920411-8920430 None:intergenic 35.0%
ATGTTTGCAAATTGGCTGAT+TGG + chr5_4:8920412-8920431 Msa0835530:CDS 35.0%
CTTAAAAGATGTTGTTCCTG+GGG - chr5_4:8920530-8920549 None:intergenic 35.0%
CCTTAAAAGATGTTGTTCCT+GGG - chr5_4:8920531-8920550 None:intergenic 35.0%
TCCTTAAAAGATGTTGTTCC+TGG - chr5_4:8920532-8920551 None:intergenic 35.0%
TTCAGTACCCAACATTTCTT+TGG + chr5_4:8920684-8920703 Msa0835530:intron 35.0%
!! AATTTTGATGCCTTGTCTTC+AGG + chr5_4:8920793-8920812 Msa0835530:intron 35.0%
! AAAGGAAAGCATGGGTAAAT+AGG - chr5_4:8920885-8920904 None:intergenic 35.0%
CAATTAGGAAAAGGAAAGCA+TGG - chr5_4:8920894-8920913 None:intergenic 35.0%
GGAAGAGAACAATTAGGAAA+AGG - chr5_4:8920903-8920922 None:intergenic 35.0%
AGCAAAGGAAGAGAACAATT+AGG - chr5_4:8920909-8920928 None:intergenic 35.0%
TCTCAATTACTTTCCCTTGA+CGG + chr5_4:8920947-8920966 Msa0835530:intron 35.0%
AACCTGCTAAAAGAATCTAC+TGG + chr5_4:8921056-8921075 Msa0835530:intron 35.0%
! TTCCAGTAGATTCTTTTAGC+AGG - chr5_4:8921061-8921080 None:intergenic 35.0%
CGAGTATATTTCCTGTCTTA+TGG - chr5_4:8921094-8921113 None:intergenic 35.0%
ACAAGATCATACTGTTGACA+AGG - chr5_4:8921270-8921289 None:intergenic 35.0%
TCTCTATGTTCAAACTGACA+TGG + chr5_4:8921349-8921368 Msa0835530:intron 35.0%
!!! ACTTCTCCATTGGACTTTTT+TGG + chr5_4:8921526-8921545 Msa0835530:CDS 35.0%
AAGCATCCAAAAAAGTCCAA+TGG - chr5_4:8921535-8921554 None:intergenic 35.0%
!!! TTGGACTTTTTTGGATGCTT+TGG + chr5_4:8921535-8921554 Msa0835530:CDS 35.0%
!!! TGGACTTTTTTGGATGCTTT+GGG + chr5_4:8921536-8921555 Msa0835530:CDS 35.0%
TCAATCCTAATTGCACTTCT+CGG - chr5_4:8921862-8921881 None:intergenic 35.0%
ACCATCATCACTTAGAATTG+AGG + chr5_4:8921946-8921965 Msa0835530:CDS 35.0%
TCCTCAATTCTAAGTGATGA+TGG - chr5_4:8921950-8921969 None:intergenic 35.0%
! CTCATCAATTTTTCATGTGC+AGG + chr5_4:8922109-8922128 Msa0835530:intron 35.0%
TATGTACCTAATGAATTGCG+TGG + chr5_4:8922293-8922312 Msa0835530:CDS 35.0%
AATGGCATAATTGTTGAGAG+TGG + chr5_4:8922518-8922537 Msa0835530:intron 35.0%
ATGGCATAATTGTTGAGAGT+GGG + chr5_4:8922519-8922538 Msa0835530:intron 35.0%
TTTACATAGATGACTCTCGT+TGG - chr5_4:8922642-8922661 None:intergenic 35.0%
ATAAACTTCAGGGACAAGTT+GGG - chr5_4:8922722-8922741 None:intergenic 35.0%
AATAAACTTCAGGGACAAGT+TGG - chr5_4:8922723-8922742 None:intergenic 35.0%
! TACTGTAGGATGATTTTGGA+GGG - chr5_4:8923011-8923030 None:intergenic 35.0%
! TTGAGTTCCATCATTTTGAG+GGG + chr5_4:8923037-8923056 Msa0835530:intron 35.0%
TACAAATCCCCTCAAAATGA+TGG - chr5_4:8923047-8923066 None:intergenic 35.0%
TAAAAGGGATGAAGAGCTTT+GGG - chr5_4:8923106-8923125 None:intergenic 35.0%
!! TAATTCACTTTTGCTACCCT+TGG + chr5_4:8923349-8923368 Msa0835530:intron 35.0%
! TTTTGCTACCCTTGGAAAAA+AGG + chr5_4:8923357-8923376 Msa0835530:intron 35.0%
TTTGCTACCCTTGGAAAAAA+GGG + chr5_4:8923358-8923377 Msa0835530:intron 35.0%
!! ATTGAAGAGATGGATTACTC+TGG - chr5_4:8923386-8923405 None:intergenic 35.0%
ATCCAAACTCGATCCAAAAA+GGG + chr5_4:8923446-8923465 Msa0835530:intron 35.0%
TCCCAAATATGTTTGAGTCA+TGG + chr5_4:8923484-8923503 Msa0835530:intron 35.0%
CCCATGACTCAAACATATTT+GGG - chr5_4:8923488-8923507 None:intergenic 35.0%
CCCAAATATGTTTGAGTCAT+GGG + chr5_4:8923485-8923504 Msa0835530:intron 35.0%
TCCCATGACTCAAACATATT+TGG - chr5_4:8923489-8923508 None:intergenic 35.0%
GATTAGGATTGTTCTTCTCT+AGG + chr5_4:8923536-8923555 Msa0835530:intron 35.0%
! TTCTTTGATGTAACTGGTTC+AGG + chr5_4:8923607-8923626 Msa0835530:intron 35.0%
CTAAGAATGCATTAGAAACC+AGG - chr5_4:8923639-8923658 None:intergenic 35.0%
! AATAATACACCCTCTTTTGC+AGG + chr5_4:8923922-8923941 Msa0835530:three_prime_UTR 35.0%
! ACTTTTAGTGAATGCTGAAC+TGG + chr5_4:8924079-8924098 Msa0835530:three_prime_UTR 35.0%
! TTATTGGGGTACTTTCTGTA+AGG + chr5_4:8924106-8924125 Msa0835530:three_prime_UTR 35.0%
ACATGAAGTAGAAGAGAACT+TGG - chr5_4:8924188-8924207 None:intergenic 35.0%
ATCCTCCATAAGCAAATACA+AGG - chr5_4:8924283-8924302 None:intergenic 35.0%
AAATGCACATGAAGATCACA+AGG + chr5_4:8924370-8924389 Msa0835530:three_prime_UTR 35.0%
!! AAGGATTAGTCAGGTGTTAT+AGG - chr5_4:8924492-8924511 None:intergenic 35.0%
!! TCATAACTTGTTAGCATGCA+AGG - chr5_4:8924511-8924530 None:intergenic 35.0%
AAAAACTTGCATACCTACCA+CGG - chr5_4:8924574-8924593 None:intergenic 35.0%
GTTGCAATGGAGAAGCAAAA+CGG - chr5_4:8916474-8916493 None:intergenic 40.0%
ATATAAAACGCCAATGGGAG+TGG + chr5_4:8916607-8916626 Msa0835530:exon 40.0%
CTTTCAATAACCACTCCCAT+TGG - chr5_4:8916620-8916639 None:intergenic 40.0%
!! TGATGGATTCAGTTCCCAAA+TGG - chr5_4:8916645-8916664 None:intergenic 40.0%
ACTTCCACAATCTTCGATCA+TGG + chr5_4:8916731-8916750 Msa0835530:CDS 40.0%
GATTCCATGATCGAAGATTG+TGG - chr5_4:8916738-8916757 None:intergenic 40.0%
!! CGATTGCTATTTAGGCGTAT+CGG - chr5_4:8917591-8917610 None:intergenic 40.0%
GATACATATAGACGGCGTAT+CGG - chr5_4:8917627-8917646 None:intergenic 40.0%
!! CTAGAGTATCCACCTTTTGA+AGG + chr5_4:8917947-8917966 Msa0835530:intron 40.0%
!! GTATCCACCTTTTGAAGGAA+AGG + chr5_4:8917952-8917971 Msa0835530:intron 40.0%
!! TCTTTGACTGGTTTGGATGA+AGG - chr5_4:8917991-8918010 None:intergenic 40.0%
CTGAGTTCTTCTTCTTTGAC+TGG - chr5_4:8918003-8918022 None:intergenic 40.0%
AAGATGATCATCGTCCTTGT+TGG + chr5_4:8918101-8918120 Msa0835530:intron 40.0%
AGATGATCATCGTCCTTGTT+GGG + chr5_4:8918102-8918121 Msa0835530:intron 40.0%
ATTCAGACATAAGCCCAACA+AGG - chr5_4:8918118-8918137 None:intergenic 40.0%
TTCTTCCAAACCAGTCAAAG+AGG - chr5_4:8918248-8918267 None:intergenic 40.0%
!! TCTTTGACTGGTTTGGAAGA+AGG + chr5_4:8918247-8918266 Msa0835530:intron 40.0%
! ACTAGAGTATCCACCTTTGA+AGG - chr5_4:8918285-8918304 None:intergenic 40.0%
TTGTTCAGAGGCTTCAGAAT+TGG + chr5_4:8918344-8918363 Msa0835530:intron 40.0%
ACGTATCAGATACGATTCAG+TGG + chr5_4:8918636-8918655 Msa0835530:intron 40.0%
CTGAGTTTGGTCTATGACAA+CGG + chr5_4:8918726-8918745 Msa0835530:intron 40.0%
TATCGGATACGTAACCGATA+CGG - chr5_4:8918924-8918943 None:intergenic 40.0%
! TCTGTTTTCTCAGTTGTGGA+AGG + chr5_4:8919307-8919326 Msa0835530:intron 40.0%
AAGGTCTATGGTCAGTGTTT+GGG + chr5_4:8919326-8919345 Msa0835530:CDS 40.0%
! GAGTATGAGTTAGCTTCACA+TGG + chr5_4:8919349-8919368 Msa0835530:CDS 40.0%
TAGCTTCACATGGATTTGAC+AGG + chr5_4:8919359-8919378 Msa0835530:CDS 40.0%
AGCTTCACATGGATTTGACA+GGG + chr5_4:8919360-8919379 Msa0835530:CDS 40.0%
! TCAAATCTGAAAGCATGCCA+AGG - chr5_4:8919444-8919463 None:intergenic 40.0%
GTGTGATTTGAACTTGAAGC+AGG + chr5_4:8919875-8919894 Msa0835530:intron 40.0%
GTCTTGGTTGTGCATTGTTT+AGG - chr5_4:8919947-8919966 None:intergenic 40.0%
GACTAGCATATGTCTCTCTA+TGG + chr5_4:8920128-8920147 Msa0835530:CDS 40.0%
GATGGTCATTCAACATGAGA+AGG + chr5_4:8920185-8920204 Msa0835530:CDS 40.0%
AAGACTTGAGCTCTTACAGA+AGG - chr5_4:8920234-8920253 None:intergenic 40.0%
! TGTGTATTTTGTCTGCAGCA+AGG + chr5_4:8920313-8920332 Msa0835530:intron 40.0%
CCAATTTGCAAACATTTGGC+TGG - chr5_4:8920407-8920426 None:intergenic 40.0%
CCAGCCAAATGTTTGCAAAT+TGG + chr5_4:8920404-8920423 Msa0835530:CDS 40.0%
AAGAAGATGACAGCAAAGGA+AGG - chr5_4:8920463-8920482 None:intergenic 40.0%
TGCTAAGAAGATGACAGCAA+AGG - chr5_4:8920467-8920486 None:intergenic 40.0%
! CCCAGGAACAACATCTTTTA+AGG + chr5_4:8920528-8920547 Msa0835530:CDS 40.0%
! TAAGCTCACATGCTTTTCTC+AGG + chr5_4:8920588-8920607 Msa0835530:intron 40.0%
CTATACATGACCTGAAGACA+AGG - chr5_4:8920806-8920825 None:intergenic 40.0%
TGCAAAGCAAAAACCGTCAA+GGG - chr5_4:8920963-8920982 None:intergenic 40.0%
ATGCAAAGCAAAAACCGTCA+AGG - chr5_4:8920964-8920983 None:intergenic 40.0%
GGTTTCTTGCAACACAAGAA+AGG - chr5_4:8921040-8921059 None:intergenic 40.0%
CAAGCTGTATTAGACCTGAA+TGG + chr5_4:8921310-8921329 Msa0835530:intron 40.0%
GACTTTATCATGCACCATTC+AGG - chr5_4:8921327-8921346 None:intergenic 40.0%
GGTTAGATGTGGAAAAGAGT+TGG + chr5_4:8921393-8921412 Msa0835530:intron 40.0%
! CAGCCATATCCTTTTATCTG+TGG - chr5_4:8921481-8921500 None:intergenic 40.0%
AAAGGATATGGCTGTTGACA+TGG + chr5_4:8921487-8921506 Msa0835530:CDS 40.0%
AAGGATATGGCTGTTGACAT+GGG + chr5_4:8921488-8921507 Msa0835530:CDS 40.0%
AAAGTCCAATGGAGAAGTGA+AGG - chr5_4:8921524-8921543 None:intergenic 40.0%
! TGCATGTGATTTTAGGCTGA+CGG + chr5_4:8921836-8921855 Msa0835530:intron 40.0%
TATTGTGGCCTATGACTATC+AGG + chr5_4:8922012-8922031 Msa0835530:CDS 40.0%
TAACTGCACCTGATAGTCAT+AGG - chr5_4:8922023-8922042 None:intergenic 40.0%
TAGGTACATACCTGCAAACA+AGG - chr5_4:8922283-8922302 None:intergenic 40.0%
TACCTAATGAATTGCGTGGA+GGG + chr5_4:8922297-8922316 Msa0835530:CDS 40.0%
!! TATGGCCATTTTCAAAGCAG+TGG - chr5_4:8922684-8922703 None:intergenic 40.0%
GGGGGCAATCAAAAAAGTTA+TGG - chr5_4:8922702-8922721 None:intergenic 40.0%
TAAACTTCAGGGACAAGTTG+GGG - chr5_4:8922721-8922740 None:intergenic 40.0%
ATACCTTTAGGCTCTGTTTG+CGG + chr5_4:8922821-8922840 Msa0835530:intron 40.0%
! GTACTGTAGGATGATTTTGG+AGG - chr5_4:8923012-8923031 None:intergenic 40.0%
GTAAAAGGGATGAAGAGCTT+TGG - chr5_4:8923107-8923126 None:intergenic 40.0%
ACTAAGAAACAGAACCCTTG+CGG - chr5_4:8923209-8923228 None:intergenic 40.0%
!!! TCTGGTACCCTTTTTTCCAA+GGG - chr5_4:8923368-8923387 None:intergenic 40.0%
CATCCAAACTCGATCCAAAA+AGG + chr5_4:8923445-8923464 Msa0835530:intron 40.0%
TGTTTCTTTCTCTCCTTGAC+AGG + chr5_4:8923509-8923528 Msa0835530:intron 40.0%
GTTTCTTTCTCTCCTTGACA+GGG + chr5_4:8923510-8923529 Msa0835530:intron 40.0%
ATCCTAATCTATCCCTGTCA+AGG - chr5_4:8923525-8923544 None:intergenic 40.0%
ATGCATTAGAAACCAGGAGA+TGG - chr5_4:8923633-8923652 None:intergenic 40.0%
AACTTCCTTTCTACTGTTGC+AGG + chr5_4:8923758-8923777 Msa0835530:intron 40.0%
ACTTCCTTTCTACTGTTGCA+GGG + chr5_4:8923759-8923778 Msa0835530:intron 40.0%
AATGCAACTCTAATGGCGTT+TGG + chr5_4:8923804-8923823 Msa0835530:CDS 40.0%
!! TTTGGTTTGTTGTTAGCAGC+TGG + chr5_4:8923831-8923850 Msa0835530:CDS 40.0%
GGAAGCAACCTTATAACAAC+TGG + chr5_4:8923880-8923899 Msa0835530:CDS 40.0%
CTACCAAATCCTGCAAAAGA+GGG - chr5_4:8923934-8923953 None:intergenic 40.0%
ACTACCAAATCCTGCAAAAG+AGG - chr5_4:8923935-8923954 None:intergenic 40.0%
! TTTGCAGGATTTGGTAGTAG+TGG + chr5_4:8923937-8923956 Msa0835530:three_prime_UTR 40.0%
!! GATTTGGTAGTAGTGGATGT+CGG + chr5_4:8923944-8923963 Msa0835530:three_prime_UTR 40.0%
ATGCTGAACTGGACTGTTAT+TGG + chr5_4:8924090-8924109 Msa0835530:three_prime_UTR 40.0%
TGCTGAACTGGACTGTTATT+GGG + chr5_4:8924091-8924110 Msa0835530:three_prime_UTR 40.0%
CTCCTTGTATTTGCTTATGG+AGG + chr5_4:8924278-8924297 Msa0835530:three_prime_UTR 40.0%
TATCACAATCTGCTTACGGT+GGG + chr5_4:8924335-8924354 Msa0835530:three_prime_UTR 40.0%
TTAGCGTCACTAATGTGAGT+TGG + chr5_4:8924423-8924442 Msa0835530:three_prime_UTR 40.0%
TAGCGTCACTAATGTGAGTT+GGG + chr5_4:8924424-8924443 Msa0835530:three_prime_UTR 40.0%
!! TTAGCATGCAAGGATTAGTC+AGG - chr5_4:8924501-8924520 None:intergenic 40.0%
GCAGTAACTTCTCGTTGCAA+TGG - chr5_4:8916487-8916506 None:intergenic 45.0%
GAAGTTCTGTTAGCAGCATG+AGG - chr5_4:8916716-8916735 None:intergenic 45.0%
AAACGACGAGAAAGTTGCGT+TGG - chr5_4:8916781-8916800 None:intergenic 45.0%
GTCGTTTATTCTCTCGCTTC+AGG + chr5_4:8916794-8916813 Msa0835530:CDS 45.0%
ACGCCGTCTATATGTATCGA+AGG + chr5_4:8917629-8917648 Msa0835530:intron 45.0%
CTACTGCCCTTTCCTTCAAA+AGG - chr5_4:8917962-8917981 None:intergenic 45.0%
! TTCTGCCTCTTTGACTGGTT+TGG + chr5_4:8918240-8918259 Msa0835530:intron 45.0%
TCTCAGTTGTGGAAGGTCTA+TGG + chr5_4:8919314-8919333 Msa0835530:intron 45.0%
GAAGGTCTATGGTCAGTGTT+TGG + chr5_4:8919325-8919344 Msa0835530:CDS 45.0%
AGGTCTATGGTCAGTGTTTG+GGG + chr5_4:8919327-8919346 Msa0835530:CDS 45.0%
! TCTGAAAGCATGCCAAGGAA+AGG - chr5_4:8919439-8919458 None:intergenic 45.0%
GGAAATGCACAGTTCTTGGA+AGG - chr5_4:8919762-8919781 None:intergenic 45.0%
GATGACAGCAAAGGAAGGAA+CGG - chr5_4:8920458-8920477 None:intergenic 45.0%
! TGCTTCATTTTGCTCACCAG+AGG + chr5_4:8920493-8920512 Msa0835530:CDS 45.0%
! TCATTTTGCTCACCAGAGGA+TGG + chr5_4:8920497-8920516 Msa0835530:CDS 45.0%
!! ACTAGCCTTCACTTCTCCAT+TGG + chr5_4:8921516-8921535 Msa0835530:CDS 45.0%
TGATATCATACCACCACGGT+AGG - chr5_4:8921564-8921583 None:intergenic 45.0%
!! TTGCATGCTTTTTGGGCTCA+AGG + chr5_4:8921885-8921904 Msa0835530:CDS 45.0%
!! TTTTTGGGCTCAAGGATGCT+AGG + chr5_4:8921893-8921912 Msa0835530:CDS 45.0%
! GTTTTTCCGTGTCTCACTAG+TGG + chr5_4:8921923-8921942 Msa0835530:CDS 45.0%
TGTGCAGGAAATTGGAGTTC+TGG + chr5_4:8922124-8922143 Msa0835530:intron 45.0%
! AGCTTGTTTCATGCTTGCGT+TGG + chr5_4:8922158-8922177 Msa0835530:CDS 45.0%
TACCATCTCTCGCTAGATTG+AGG + chr5_4:8922189-8922208 Msa0835530:CDS 45.0%
GTACCTAATGAATTGCGTGG+AGG + chr5_4:8922296-8922315 Msa0835530:CDS 45.0%
ATCCCTCCACGCAATTCATT+AGG - chr5_4:8922302-8922321 None:intergenic 45.0%
CAGAATTGCAGCATTTGCAG+GGG - chr5_4:8922342-8922361 None:intergenic 45.0%
GCAGAATTGCAGCATTTGCA+GGG - chr5_4:8922343-8922362 None:intergenic 45.0%
AGCAGAATTGCAGCATTTGC+AGG - chr5_4:8922344-8922363 None:intergenic 45.0%
GCATAATTGTTGAGAGTGGG+TGG + chr5_4:8922522-8922541 Msa0835530:intron 45.0%
! AAACTTCAGGGACAAGTTGG+GGG - chr5_4:8922720-8922739 None:intergenic 45.0%
TACCTTTAGGCTCTGTTTGC+GGG + chr5_4:8922822-8922841 Msa0835530:intron 45.0%
TTTGGGAGGGGATGAATTTG+GGG - chr5_4:8923089-8923108 None:intergenic 45.0%
! CTTTGGGAGGGGATGAATTT+GGG - chr5_4:8923090-8923109 None:intergenic 45.0%
!! AGGAAAGGGCTTTGGGTAAA+AGG - chr5_4:8923139-8923158 None:intergenic 45.0%
TAAGGCTCTGTTTGCGAGTT+TGG - chr5_4:8923172-8923191 None:intergenic 45.0%
AACTCGCAAACAGAGCCTTA+AGG + chr5_4:8923172-8923191 Msa0835530:intron 45.0%
ACTCGCAAACAGAGCCTTAA+GGG + chr5_4:8923173-8923192 Msa0835530:intron 45.0%
!!! CTCTGGTACCCTTTTTTCCA+AGG - chr5_4:8923369-8923388 None:intergenic 45.0%
! CACCCTTTTTGGATCGAGTT+TGG - chr5_4:8923451-8923470 None:intergenic 45.0%
CTCCTTGACAGGGATAGATT+AGG + chr5_4:8923520-8923539 Msa0835530:intron 45.0%
AAACCAAAAGCCTACGCACT+AGG - chr5_4:8923566-8923585 None:intergenic 45.0%
! ACACCCTCTTTTGCAGGATT+TGG + chr5_4:8923928-8923947 Msa0835530:three_prime_UTR 45.0%
GCTGAACTGGACTGTTATTG+GGG + chr5_4:8924092-8924111 Msa0835530:three_prime_UTR 45.0%
CCGTAAGCAGATTGTGATAG+CGG - chr5_4:8924334-8924353 None:intergenic 45.0%
CCGCTATCACAATCTGCTTA+CGG + chr5_4:8924331-8924350 Msa0835530:three_prime_UTR 45.0%
CTATCACAATCTGCTTACGG+TGG + chr5_4:8924334-8924353 Msa0835530:three_prime_UTR 45.0%
TCAAAACTTGCAACCGTGGT+AGG + chr5_4:8924558-8924577 Msa0835530:three_prime_UTR 45.0%
GAAAGCTTATCGCAGTGTGC+CGG - chr5_4:8917709-8917728 None:intergenic 50.0%
CTGCCCTTTCCTTCAAAAGG+TGG - chr5_4:8917959-8917978 None:intergenic 50.0%
CCAGTCAAAGAGGCAGAACT+CGG - chr5_4:8918238-8918257 None:intergenic 50.0%
GAGTGCTCTACTGCCTTCAA+AGG + chr5_4:8918269-8918288 Msa0835530:intron 50.0%
TGCTCTACTGCCTTCAAAGG+TGG + chr5_4:8918272-8918291 Msa0835530:intron 50.0%
ACGGTCAGACGTATCTGAGT+CGG + chr5_4:8918548-8918567 Msa0835530:intron 50.0%
CACGGACACGATACGTGTAT+CGG - chr5_4:8918941-8918960 None:intergenic 50.0%
CTCTTTGCTGCTCCTTTCCT+TGG + chr5_4:8919424-8919443 Msa0835530:CDS 50.0%
TTTGTCTGCAGCAAGGACAC+AGG + chr5_4:8920320-8920339 Msa0835530:intron 50.0%
GATGGTCCACTAGTGAGACA+CGG - chr5_4:8921932-8921951 None:intergenic 50.0%
GGCTGCTCTCTTGTCTATTG+TGG + chr5_4:8921997-8922016 Msa0835530:CDS 50.0%
GTCCTCAATCTAGCGAGAGA+TGG - chr5_4:8922194-8922213 None:intergenic 50.0%
TGAATTGCGTGGAGGGATGA+TGG + chr5_4:8922304-8922323 Msa0835530:CDS 50.0%
GAATTGCGTGGAGGGATGAT+GGG + chr5_4:8922305-8922324 Msa0835530:CDS 50.0%
AATTGCGTGGAGGGATGATG+GGG + chr5_4:8922306-8922325 Msa0835530:CDS 50.0%
!! GGCTGCCACTGCTTTGAAAA+TGG + chr5_4:8922676-8922695 Msa0835530:intron 50.0%
ATCCCGCAAACAGAGCCTAA+AGG - chr5_4:8922827-8922846 None:intergenic 50.0%
TTAGGCTCTGTTTGCGGGAT+TGG + chr5_4:8922827-8922846 Msa0835530:intron 50.0%
TAGGCTCTGTTTGCGGGATT+GGG + chr5_4:8922828-8922847 Msa0835530:intron 50.0%
TTGGGAGGGGATGAATTTGG+GGG - chr5_4:8923088-8923107 None:intergenic 50.0%
!! GCTTTGGGAGGGGATGAATT+TGG - chr5_4:8923091-8923110 None:intergenic 50.0%
!! AGGGATGAAGAGCTTTGGGA+GGG - chr5_4:8923102-8923121 None:intergenic 50.0%
!! AAGGGATGAAGAGCTTTGGG+AGG - chr5_4:8923103-8923122 None:intergenic 50.0%
CTCTGTTTGCGAGTTTGGAG+GGG - chr5_4:8923167-8923186 None:intergenic 50.0%
GCTCTGTTTGCGAGTTTGGA+GGG - chr5_4:8923168-8923187 None:intergenic 50.0%
ACAGAGCCTTAAGGGAGTTG+TGG + chr5_4:8923181-8923200 Msa0835530:intron 50.0%
! TCTAGGTTGACCTAGTGCGT+AGG + chr5_4:8923553-8923572 Msa0835530:intron 50.0%
! TGACCTAGTGCGTAGGCTTT+TGG + chr5_4:8923560-8923579 Msa0835530:intron 50.0%
TCCTTTCTACTGTTGCAGGG+TGG + chr5_4:8923762-8923781 Msa0835530:intron 50.0%
!! CTAATGGCGTTTGGTGCGTT+TGG + chr5_4:8923813-8923832 Msa0835530:CDS 50.0%
ATGCATGCCCTGAAGCAATG+CGG + chr5_4:8923858-8923877 Msa0835530:CDS 50.0%
TTGCTTCCCGCATTGCTTCA+GGG - chr5_4:8923868-8923887 None:intergenic 50.0%
CTTACGGTGGGAAGTTTCTC+TGG + chr5_4:8924347-8924366 Msa0835530:three_prime_UTR 50.0%
GGTGTCAAAACTTGCAACCG+TGG + chr5_4:8924554-8924573 Msa0835530:three_prime_UTR 50.0%
GACGGCGTATCGGAGTGTAT+TGG - chr5_4:8917617-8917636 None:intergenic 55.0%
CCGAGTTCTGCCTCTTTGAC+TGG + chr5_4:8918235-8918254 Msa0835530:intron 55.0%
GTCAGACGTATCTGAGTCGG+AGG + chr5_4:8918551-8918570 Msa0835530:intron 55.0%
TAGGCGCATTGCTGCTGCAT+AGG + chr5_4:8918664-8918683 Msa0835530:intron 55.0%
GTATCGTGTCCGTGCTTCGT+AGG + chr5_4:8918947-8918966 Msa0835530:intron 55.0%
TGGGGTTTCTGTCCATCCTC+TGG - chr5_4:8920512-8920531 None:intergenic 55.0%
AGAGGATGGACAGAAACCCC+AGG + chr5_4:8920511-8920530 Msa0835530:CDS 55.0%
! GACGGCCGAGAAGTGCAATT+AGG + chr5_4:8921854-8921873 Msa0835530:CDS 55.0%
AGGCTCTGTTTGCGGGATTG+GGG + chr5_4:8922829-8922848 Msa0835530:intron 55.0%
TGGGAGGGGATGAATTTGGG+GGG - chr5_4:8923087-8923106 None:intergenic 55.0%
!! GGGATGAAGAGCTTTGGGAG+GGG - chr5_4:8923101-8923120 None:intergenic 55.0%
TTTGCGAGTTTGGAGGGGAG+GGG - chr5_4:8923162-8923181 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+GGG - chr5_4:8923163-8923182 None:intergenic 55.0%
TGTTTGCGAGTTTGGAGGGG+AGG - chr5_4:8923164-8923183 None:intergenic 55.0%
GGCTCTGTTTGCGAGTTTGG+AGG - chr5_4:8923169-8923188 None:intergenic 55.0%
GCGGTACCACAACTCCCTTA+AGG - chr5_4:8923190-8923209 None:intergenic 55.0%
AAGGGAGTTGTGGTACCGCA+AGG + chr5_4:8923191-8923210 Msa0835530:intron 55.0%
AGGGAGTTGTGGTACCGCAA+GGG + chr5_4:8923192-8923211 Msa0835530:intron 55.0%
! AACTGGTTCAGGCCATCTCC+TGG + chr5_4:8923618-8923637 Msa0835530:intron 55.0%
GCCACCCTGCAACAGTAGAA+AGG - chr5_4:8923766-8923785 None:intergenic 55.0%
TGCATGCCCTGAAGCAATGC+GGG + chr5_4:8923859-8923878 Msa0835530:CDS 55.0%
GTTGCTTCCCGCATTGCTTC+AGG - chr5_4:8923869-8923888 None:intergenic 55.0%
TCGGTCTCTCTCGTACACTC+TGG + chr5_4:8923963-8923982 Msa0835530:three_prime_UTR 55.0%
CGGTCTCTCTCGTACACTCT+GGG + chr5_4:8923964-8923983 Msa0835530:three_prime_UTR 55.0%
! GCAGTGTGCCGGCAACGTAT+CGG - chr5_4:8917698-8917717 None:intergenic 60.0%
! GATGCTTTGGGCACCTACCG+TGG + chr5_4:8921548-8921567 Msa0835530:CDS 60.0%
GGCTCTGTTTGCGGGATTGG+GGG + chr5_4:8922830-8922849 Msa0835530:intron 60.0%
GCTCTGTTTGCGGGATTGGG+GGG + chr5_4:8922831-8922850 Msa0835530:intron 60.0%
TGTTTGCGGGATTGGGGGGA+GGG + chr5_4:8922835-8922854 Msa0835530:intron 60.0%
GGAGGGGAGGAAAGGGCTTT+GGG - chr5_4:8923146-8923165 None:intergenic 60.0%
TTGGAGGGGAGGGGAGGAAA+GGG - chr5_4:8923153-8923172 None:intergenic 60.0%
TTTGGAGGGGAGGGGAGGAA+AGG - chr5_4:8923154-8923173 None:intergenic 60.0%
! GCTTTGGGCACCTACCGTGG+TGG + chr5_4:8921551-8921570 Msa0835530:CDS 65.0%
CTGTTTGCGGGATTGGGGGG+AGG + chr5_4:8922834-8922853 Msa0835530:intron 65.0%
GTTTGCGGGATTGGGGGGAG+GGG + chr5_4:8922836-8922855 Msa0835530:intron 65.0%
GGGAGGGGAGGAAAGGGCTT+TGG - chr5_4:8923147-8923166 None:intergenic 65.0%
GCGAGTTTGGAGGGGAGGGG+AGG - chr5_4:8923159-8923178 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 8916440 8924745 8916440 ID=Msa0835530;Name=Msa0835530
chr5_4 mRNA 8916440 8924745 8916440 ID=Msa0835530-mRNA-1;Parent=Msa0835530;Name=Msa0835530-mRNA-1;_AED=0.08;_eAED=0.08;_QI=180|1|1|1|0.66|0.7|10|803|447
chr5_4 exon 8916440 8916815 8916440 ID=Msa0835530-mRNA-1:exon:3906;Parent=Msa0835530-mRNA-1
chr5_4 exon 8919320 8919464 8919320 ID=Msa0835530-mRNA-1:exon:3907;Parent=Msa0835530-mRNA-1
chr5_4 exon 8920038 8920206 8920038 ID=Msa0835530-mRNA-1:exon:3908;Parent=Msa0835530-mRNA-1
chr5_4 exon 8920331 8920586 8920331 ID=Msa0835530-mRNA-1:exon:3909;Parent=Msa0835530-mRNA-1
chr5_4 exon 8921484 8921572 8921484 ID=Msa0835530-mRNA-1:exon:3910;Parent=Msa0835530-mRNA-1
chr5_4 exon 8921851 8922033 8921851 ID=Msa0835530-mRNA-1:exon:3911;Parent=Msa0835530-mRNA-1
chr5_4 exon 8922131 8922216 8922131 ID=Msa0835530-mRNA-1:exon:3912;Parent=Msa0835530-mRNA-1
chr5_4 exon 8922292 8922376 8922292 ID=Msa0835530-mRNA-1:exon:3913;Parent=Msa0835530-mRNA-1
chr5_4 exon 8923780 8924579 8923780 ID=Msa0835530-mRNA-1:exon:3914;Parent=Msa0835530-mRNA-1
chr5_4 exon 8924608 8924745 8924608 ID=Msa0835530-mRNA-1:exon:3915;Parent=Msa0835530-mRNA-1
chr5_4 five_prime_UTR 8916440 8916619 8916440 ID=Msa0835530-mRNA-1:five_prime_utr;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8916620 8916815 8916620 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8919320 8919464 8919320 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8920038 8920206 8920038 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8920331 8920586 8920331 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8921484 8921572 8921484 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8921851 8922033 8921851 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8922131 8922216 8922131 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8922292 8922376 8922292 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 CDS 8923780 8923914 8923780 ID=Msa0835530-mRNA-1:cds;Parent=Msa0835530-mRNA-1
chr5_4 three_prime_UTR 8923915 8924579 8923915 ID=Msa0835530-mRNA-1:three_prime_utr;Parent=Msa0835530-mRNA-1
chr5_4 three_prime_UTR 8924608 8924745 8924608 ID=Msa0835530-mRNA-1:three_prime_utr;Parent=Msa0835530-mRNA-1
Gene Sequence

>Msa0835530

ATGGGAGTGGTTATTGAAAGTTCCATTTGGGAACTGAATCCATCAATTTTCATATTCATCTTCGTTTGTTGCATATTCTCGATCTTTCTTTATCCTCATGCTGCTAACAGAACTTCCACAATCTTCGATCATGGAATCTCTTCATCGTTTCTTCGTTTCCAACGCAACTTTCTCGTCGTTTATTCTCTCGCTTCAGTTGTGGAAGGTCTATGGTCAGTGTTTGGGGAGTATGAGTTAGCTTCACATGGATTTGACAGGGAGAAGATGATCATGTCTCTCTGTTATGGTTATACAACTGCTCTCTTTGCTGCTCCTTTCCTTGGCATGCTTTCAGATTTGATAGGTCAGAAGAAAGTTTGTTTGATCTTTTGCATCCTACACTTATTTGTTGGTGTATGGAAGAAGATTACACAGCAACCAAGCATTTTCATGACTAGCATATGTCTCTCTATGGCCAATACAATATTCTCATTCAGTTTTGAGACTTGGATGGTCATTCAACATGAGAAGCAAGGACACAGGCTTGACTCACTCAATGACACATATTGGTTAATGACTTTCTTTGAGTCTGCATGTTTTATTGCCAGCCAAATGTTTGCAAATTGGCTGATTGGTAATAATATGGAGAAAAACACCGTTCCTTCCTTTGCTGTCATCTTCTTAGCAATCGTATGCTTCATTTTGCTCACCAGAGGATGGACAGAAACCCCAGGAACAACATCTTTTAAGGAGTATAGTATGTCCTTCTATACATATATTTTTGGTGATAAAAGGATATGGCTGTTGACATGGGCACAAACTAGCCTTCACTTCTCCATTGGACTTTTTTGGATGCTTTGGGCACCTACCGTGGTGGCTGACGGCCGAGAAGTGCAATTAGGATTGATATTTGCATGCTTTTTGGGCTCAAGGATGCTAGGAAGCACTGTTTTTCCGTGTCTCACTAGTGGACCATCATCACTTAGAATTGAGGACTGCCTAGTATCTGCATACATCATATTGGCTGCTCTCTTGTCTATTGTGGCCTATGACTATCAGGAAATTGGAGTTCTGGTGACACTTTTTAGCTTGTTTCATGCTTGCGTTGGCTTCGTTTTACCATCTCTCGCTAGATTGAGGACCATGTATGTACCTAATGAATTGCGTGGAGGGATGATGGGGCTCTCTCTTGCCCCTGCAAATGCTGCAATTCTGCTATCTGTGTTGCAAGGTGGCTATTATCGAAATGTTGAAAATGCAACTCTAATGGCGTTTGGTGCGTTTGGTTTGTTGTTAGCAGCTGGATGCATGCATGCCCTGAAGCAATGCGGGAAGCAACCTTATAACAACTGGCATAAACAGTGA
Protein sequence

>Msa0835530

MGVVIESSIWELNPSIFIFIFVCCIFSIFLYPHAANRTSTIFDHGISSSFLRFQRNFLVVYSLASVVEGLWSVFGEYELASHGFDREKMIMSLCYGYTTALFAAPFLGMLSDLIGQKKVCLIFCILHLFVGVWKKITQQPSIFMTSICLSMANTIFSFSFETWMVIQHEKQGHRLDSLNDTYWLMTFFESACFIASQMFANWLIGNNMEKNTVPSFAVIFLAIVCFILLTRGWTETPGTTSFKEYSMSFYTYIFGDKRIWLLTWAQTSLHFSIGLFWMLWAPTVVADGREVQLGLIFACFLGSRMLGSTVFPCLTSGPSSLRIEDCLVSAYIILAALLSIVAYDYQEIGVLVTLFSLFHACVGFVLPSLARLRTMYVPNELRGGMMGLSLAPANAAILLSVLQGGYYRNVENATLMAFGAFGLLLAAGCMHALKQCGKQPYNNWHKQ*