Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191180 | AES82285.2 | 92.710 | 535 | 10 | 4 | 2 | 507 | 82 | 616 | 0.0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191180 | sp|Q9M1R2|SYPC_ARATH | 80.522 | 498 | 71 | 3 | 35 | 507 | 34 | 530 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191180 | G7KUM3 | 92.710 | 535 | 10 | 4 | 2 | 507 | 82 | 616 | 0.0 | 1003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011840 | Msa1191180 | 0.817534 | 3.137051e-52 | -8.615850e-47 |
| Msa0024400 | Msa1191180 | 0.804569 | 2.028476e-49 | -8.615850e-47 |
| Msa0027820 | Msa1191180 | 0.818984 | 1.473815e-52 | -8.615850e-47 |
| Msa0044000 | Msa1191180 | 0.807627 | 4.607816e-50 | -8.615850e-47 |
| Msa0105410 | Msa1191180 | 0.815075 | 1.113023e-51 | -8.615850e-47 |
| Msa0106620 | Msa1191180 | 0.807687 | 4.474753e-50 | -8.615850e-47 |
| Msa0106710 | Msa1191180 | 0.809100 | 2.235992e-50 | -8.615850e-47 |
| Msa0611210 | Msa1191180 | 0.809231 | 2.096233e-50 | -8.615850e-47 |
| Msa0619050 | Msa1191180 | 0.804849 | 1.772640e-49 | -8.615850e-47 |
| Msa0626450 | Msa1191180 | 0.801084 | 1.063883e-48 | -8.615850e-47 |
| Msa0629240 | Msa1191180 | 0.805247 | 1.463666e-49 | -8.615850e-47 |
| Msa0651550 | Msa1191180 | 0.805614 | 1.226385e-49 | -8.615850e-47 |
| Msa0664600 | Msa1191180 | 0.804435 | 2.163566e-49 | -8.615850e-47 |
| Msa0692980 | Msa1191180 | 0.814804 | 1.278188e-51 | -8.615850e-47 |
| Msa0695880 | Msa1191180 | 0.811072 | 8.406981e-51 | -8.615850e-47 |
| Msa0706230 | Msa1191180 | 0.808004 | 3.832047e-50 | -8.615850e-47 |
| Msa0755330 | Msa1191180 | 0.809426 | 1.903162e-50 | -8.615850e-47 |
| Msa0784480 | Msa1191180 | 0.806895 | 6.588219e-50 | -8.615850e-47 |
| Msa0818060 | Msa1191180 | 0.819543 | 1.098912e-52 | -8.615850e-47 |
| Msa0822500 | Msa1191180 | 0.814436 | 1.542434e-51 | -8.615850e-47 |
| Msa0832340 | Msa1191180 | 0.816450 | 5.495885e-52 | -8.615850e-47 |
| Msa0833530 | Msa1191180 | 0.818090 | 2.350143e-52 | -8.615850e-47 |
| Msa0127800 | Msa1191180 | 0.810943 | 8.962723e-51 | -8.615850e-47 |
| Msa0163510 | Msa1191180 | 0.812518 | 4.072822e-51 | -8.615850e-47 |
| Msa0200990 | Msa1191180 | 0.816107 | 6.558681e-52 | -8.615850e-47 |
| Msa0204960 | Msa1191180 | 0.827975 | 1.162453e-54 | -8.615850e-47 |
| Msa0211150 | Msa1191180 | 0.804963 | 1.678385e-49 | -8.615850e-47 |
| Msa0214550 | Msa1191180 | 0.877161 | 7.844842e-69 | -8.615850e-47 |
| Msa0234090 | Msa1191180 | 0.809856 | 1.538641e-50 | -8.615850e-47 |
| Msa0237420 | Msa1191180 | 0.848212 | 7.075418e-60 | -8.615850e-47 |
| Msa0432160 | Msa1191180 | 0.804527 | 2.070243e-49 | -8.615850e-47 |
| Msa0450400 | Msa1191180 | -0.811752 | 5.982908e-51 | -8.615850e-47 |
| Msa0468250 | Msa1191180 | 0.800987 | 1.113534e-48 | -8.615850e-47 |
| Msa0468270 | Msa1191180 | 0.820065 | 8.348977e-53 | -8.615850e-47 |
| Msa0476680 | Msa1191180 | 0.806591 | 7.634794e-50 | -8.615850e-47 |
| Msa0980140 | Msa1191180 | 0.814633 | 1.394693e-51 | -8.615850e-47 |
| Msa0992510 | Msa1191180 | 0.821161 | 4.676794e-53 | -8.615850e-47 |
| Msa1012800 | Msa1191180 | 0.826589 | 2.497135e-54 | -8.615850e-47 |
| Msa1034500 | Msa1191180 | 0.811205 | 7.866868e-51 | -8.615850e-47 |
| Msa1047760 | Msa1191180 | 0.804949 | 1.689684e-49 | -8.615850e-47 |
| Msa1089450 | Msa1191180 | 0.830664 | 2.585015e-55 | -8.615850e-47 |
| Msa1101090 | Msa1191180 | 0.823150 | 1.616977e-53 | -8.615850e-47 |
| Msa0240900 | Msa1191180 | 0.817838 | 2.678624e-52 | -8.615850e-47 |
| Msa0244640 | Msa1191180 | 0.806412 | 8.331271e-50 | -8.615850e-47 |
| Msa0251710 | Msa1191180 | 0.817088 | 3.952227e-52 | -8.615850e-47 |
| Msa0257490 | Msa1191180 | 0.807357 | 5.257781e-50 | -8.615850e-47 |
| Msa0263920 | Msa1191180 | 0.814050 | 1.876765e-51 | -8.615850e-47 |
| Msa0277850 | Msa1191180 | 0.813989 | 1.936033e-51 | -8.615850e-47 |
| Msa0278570 | Msa1191180 | 0.812064 | 5.116238e-51 | -8.615850e-47 |
| Msa0279850 | Msa1191180 | 0.806245 | 9.033426e-50 | -8.615850e-47 |
| Msa0281530 | Msa1191180 | 0.819225 | 1.298766e-52 | -8.615850e-47 |
| Msa0290720 | Msa1191180 | 0.822156 | 2.754517e-53 | -8.615850e-47 |
| Msa0296790 | Msa1191180 | 0.807131 | 5.872822e-50 | -8.615850e-47 |
| Msa0298410 | Msa1191180 | 0.801020 | 1.096504e-48 | -8.615850e-47 |
| Msa0317970 | Msa1191180 | 0.835998 | 1.210715e-56 | -8.615850e-47 |
| Msa1191180 | Msa1211230 | -0.830258 | 3.250270e-55 | -8.615850e-47 |
| Msa1191180 | Msa1211420 | -0.820960 | 5.202294e-53 | -8.615850e-47 |
| Msa1191180 | Msa1213250 | 0.803797 | 2.937161e-49 | -8.615850e-47 |
| Msa1191180 | Msa1213890 | 0.817644 | 2.962991e-52 | -8.615850e-47 |
| Msa1191180 | Msa1226270 | 0.813449 | 2.545077e-51 | -8.615850e-47 |
| Msa1191180 | Msa1228040 | 0.812231 | 4.703558e-51 | -8.615850e-47 |
| Msa1191180 | Msa1244500 | 0.988607 | 1.092699e-174 | -8.615850e-47 |
| Msa1191180 | Msa1271130 | 0.850911 | 1.250184e-60 | -8.615850e-47 |
| Msa1191180 | Msa1285550 | 0.902250 | 1.174106e-78 | -8.615850e-47 |
| Msa1191180 | Msa1299400 | -0.810820 | 9.530059e-51 | -8.615850e-47 |
| Msa1191180 | Msa1325920 | 0.906377 | 1.583870e-80 | -8.615850e-47 |
| Msa1191180 | Msa1331050 | -0.822518 | 2.269488e-53 | -8.615850e-47 |
| Msa1191180 | Msa1345100 | 0.857801 | 1.274150e-62 | -8.615850e-47 |
| Msa1191180 | Msa1419690 | 0.846387 | 2.242685e-59 | -8.615850e-47 |
| Msa1191180 | Msa1434740 | 0.821280 | 4.390838e-53 | -8.615850e-47 |
| Msa0521010 | Msa1191180 | 0.806886 | 6.615725e-50 | -8.615850e-47 |
| Msa0530050 | Msa1191180 | 0.800419 | 1.454204e-48 | -8.615850e-47 |
| Msa0855870 | Msa1191180 | 0.818609 | 1.792503e-52 | -8.615850e-47 |
| Msa0933760 | Msa1191180 | 0.801493 | 8.771693e-49 | -8.615850e-47 |
| Msa0934140 | Msa1191180 | 0.812416 | 4.285853e-51 | -8.615850e-47 |
| Msa0936380 | Msa1191180 | 0.809146 | 2.185358e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191180 | MtrunA17_Chr7g0270811 | 92.628 | 529 | 10 | 4 | 8 | 507 | 1 | 529 | 0.0 | 985 |
| Msa1191180 | MtrunA17_Chr3g0143341 | 65.835 | 521 | 118 | 2 | 47 | 507 | 3 | 523 | 0.0 | 705 |
| Msa1191180 | MtrunA17_Chr3g0143331 | 54.967 | 453 | 83 | 6 | 69 | 455 | 7 | 404 | 2.34e-160 | 461 |
| Msa1191180 | MtrunA17_Chr3g0096421 | 71.383 | 311 | 73 | 1 | 213 | 507 | 9 | 319 | 1.74e-158 | 453 |
| Msa1191180 | MtrunA17_Chr3g0133261 | 38.095 | 483 | 261 | 8 | 55 | 507 | 68 | 542 | 1.26e-117 | 357 |
| Msa1191180 | MtrunA17_Chr3g0096431 | 68.027 | 147 | 47 | 0 | 42 | 188 | 4 | 150 | 3.78e-69 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191180 | AT3G62120.3 | 80.522 | 498 | 71 | 3 | 35 | 507 | 21 | 517 | 0.0 | 826 |
| Msa1191180 | AT3G62120.2 | 80.522 | 498 | 71 | 3 | 35 | 507 | 34 | 530 | 0.0 | 825 |
| Msa1191180 | AT3G62120.1 | 80.522 | 498 | 71 | 3 | 35 | 507 | 34 | 530 | 0.0 | 825 |
| Msa1191180 | AT5G52520.1 | 37.917 | 509 | 276 | 8 | 30 | 507 | 44 | 543 | 2.91e-121 | 366 |
| Msa1191180 | AT5G10880.1 | 58.824 | 221 | 69 | 3 | 309 | 507 | 89 | 309 | 4.79e-80 | 252 |
Find 139 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCTTGGTCAATGGCTATT+TGG | 0.152091 | 8_1:-35125421 | Msa1191180:CDS |
| GTTTCAGGTTCTTGAGATTT+TGG | 0.162156 | 8_1:-35123288 | Msa1191180:intron |
| ATTGAGTACTATGATATTTC+TGG | 0.186757 | 8_1:-35125458 | Msa1191180:CDS |
| GAAGCTAGTTCACCATTTAA+TGG | 0.214540 | 8_1:-35120651 | Msa1191180:three_prime_UTR |
| CAGTATGACCACTTCTTTGC+AGG | 0.254878 | 8_1:+35120710 | None:intergenic |
| GTTTGTTTCTAATACTGTTC+TGG | 0.275959 | 8_1:-35124746 | Msa1191180:CDS |
| TAACCTGATTGTTGTGGTTT+TGG | 0.279807 | 8_1:+35125804 | None:intergenic |
| GCAGGAGTCGTGAGTTTCTT+TGG | 0.293371 | 8_1:-35123665 | Msa1191180:intron |
| AGGTGCAACTTCTCATTGTT+TGG | 0.296531 | 8_1:-35123033 | Msa1191180:CDS |
| CTTATACCTTCGGGGAGTTC+TGG | 0.310554 | 8_1:+35121489 | None:intergenic |
| TAAATCAGATTCTCCAGATT+TGG | 0.310695 | 8_1:+35124397 | None:intergenic |
| TGCCCTTTACCCAGGTTGCT+TGG | 0.318425 | 8_1:-35124424 | Msa1191180:intron |
| ACCTTGGTCAATGGCTATTT+GGG | 0.328192 | 8_1:-35125420 | Msa1191180:CDS |
| CGACATTGATAATGATGATT+TGG | 0.336778 | 8_1:-35122395 | Msa1191180:CDS |
| CTGCAAAGAAGTGGTCATAC+TGG | 0.344091 | 8_1:-35120709 | Msa1191180:CDS |
| GCCCTTTACCCAGGTTGCTT+GGG | 0.351835 | 8_1:-35124423 | Msa1191180:intron |
| ACTTGAACTGAAGCTACTTT+AGG | 0.353590 | 8_1:+35122775 | None:intergenic |
| TACATAACAGTTTCACTAGT+TGG | 0.356914 | 8_1:+35124353 | None:intergenic |
| GTGTATCTATGAAGAGTATT+TGG | 0.358094 | 8_1:-35123255 | Msa1191180:CDS |
| GTTGCTTGGGTGACCAAATC+TGG | 0.358966 | 8_1:-35124410 | Msa1191180:CDS |
| TCAGTGAAGGCACCATTAAA+TGG | 0.362787 | 8_1:+35120639 | None:intergenic |
| GGGGTGATGGTGATGGTTCA+TGG | 0.366349 | 8_1:-35122823 | Msa1191180:CDS |
| CTTACTACTCTAAGTGGATA+AGG | 0.369921 | 8_1:-35124328 | Msa1191180:CDS |
| TTCTAATACTGTTCTGGAAA+AGG | 0.393006 | 8_1:-35124740 | Msa1191180:CDS |
| TGTATTCCACGACCAGTGTT+TGG | 0.394220 | 8_1:+35123056 | None:intergenic |
| GGTGCAACTTCTCATTGTTT+GGG | 0.396799 | 8_1:-35123032 | Msa1191180:CDS |
| TGGGTAATCTCCAGCTAGCT+AGG | 0.408022 | 8_1:+35126084 | None:intergenic |
| TTACTACTCTAAGTGGATAA+GGG | 0.421374 | 8_1:-35124327 | Msa1191180:CDS |
| GCAAGGACAAAGGGTGAGAC+AGG | 0.427300 | 8_1:-35121546 | Msa1191180:CDS |
| GCTTACAGTTCGAGTACTAT+AGG | 0.427959 | 8_1:+35122929 | None:intergenic |
| GGCATAGTATTCAATTGATC+AGG | 0.429044 | 8_1:+35120487 | None:intergenic |
| TGGTGCCTTCACTGAATTTG+TGG | 0.429607 | 8_1:-35120631 | Msa1191180:three_prime_UTR |
| TGTAGGTGGTGGAAAGAAGA+AGG | 0.433758 | 8_1:-35125713 | Msa1191180:intron |
| TTGTTCAATTTCCATTCCAT+TGG | 0.436683 | 8_1:+35120431 | None:intergenic |
| CGTGAGTTTCTTTGGCAAGA+AGG | 0.437042 | 8_1:-35123657 | Msa1191180:CDS |
| AGTGGTGCAATGTTGTTAGA+TGG | 0.437519 | 8_1:-35124274 | Msa1191180:CDS |
| GTTGCTACATTCTCAGACCT+TGG | 0.440376 | 8_1:-35125436 | Msa1191180:CDS |
| TTGGCAGTTCCTGTCGTAAA+GGG | 0.443422 | 8_1:-35123236 | Msa1191180:CDS |
| ACCTTGTTGTGTTGGAAAGA+AGG | 0.446489 | 8_1:+35125996 | None:intergenic |
| CTAGTTGGACGAATAGCAAT+AGG | 0.448569 | 8_1:+35124368 | None:intergenic |
| AGTGAGCTTGAGAAGTTTGC+TGG | 0.448820 | 8_1:-35123206 | Msa1191180:CDS |
| CTGGAGCAAAACCCTTGATA+TGG | 0.451172 | 8_1:+35124710 | None:intergenic |
| TCGTCATCCTTCACAATGGC+GGG | 0.453103 | 8_1:-35125885 | Msa1191180:CDS |
| GGAAAGAAGGCGAGAGAGAA+TGG | 0.455751 | 8_1:+35126009 | None:intergenic |
| CGTGCTGTTCGTCGTGATAG+TGG | 0.458000 | 8_1:-35122427 | Msa1191180:CDS |
| CAATGGTCTGGCAGAACTCA+TGG | 0.460207 | 8_1:-35122953 | Msa1191180:CDS |
| TGAGTATCAGCATCTTTGTA+AGG | 0.463332 | 8_1:+35122736 | None:intergenic |
| CGCAACTGTGAATATGTTGT+TGG | 0.465083 | 8_1:-35122692 | Msa1191180:CDS |
| TTTGGTGCAAACCAGAGGAT+TGG | 0.465554 | 8_1:+35120407 | None:intergenic |
| CACCACTGATTAAGTTTCAA+AGG | 0.466130 | 8_1:+35124290 | None:intergenic |
| AAAAGATGATCTTAGCTCCT+TGG | 0.467478 | 8_1:-35122246 | Msa1191180:CDS |
| GCCAGAGACAACTATTCTCC+TGG | 0.468582 | 8_1:-35122643 | Msa1191180:CDS |
| ACTCACTCTGTGTGTAGTGT+TGG | 0.469024 | 8_1:+35126064 | None:intergenic |
| CTTATCCACTTAGAGTAGTA+AGG | 0.470822 | 8_1:+35124329 | None:intergenic |
| TGCAAAGAAGTGGTCATACT+GGG | 0.472500 | 8_1:-35120708 | Msa1191180:CDS |
| CAACCAAAACCACAACAATC+AGG | 0.476529 | 8_1:-35125807 | Msa1191180:intron |
| ATAAACAAGCTGTGGTCAAA+AGG | 0.481778 | 8_1:+35120466 | None:intergenic |
| AATTGAACAATCCAATCCTC+TGG | 0.482198 | 8_1:-35120418 | Msa1191180:three_prime_UTR |
| AGGGAGAGAAAGCAATGGTC+TGG | 0.482327 | 8_1:-35122965 | Msa1191180:CDS |
| CATATTCACAGTTGCGGTAC+AGG | 0.488743 | 8_1:+35122699 | None:intergenic |
| CACTGAGAATATTTCCATCC+AGG | 0.489221 | 8_1:+35122625 | None:intergenic |
| TTTACAGGTTGTTGTGAATG+GGG | 0.489475 | 8_1:-35125486 | Msa1191180:intron |
| ATTAGGTTTGACCAATAAGA+AGG | 0.491019 | 8_1:-35125671 | Msa1191180:CDS |
| CATTCTCAGACCTTGGTCAA+TGG | 0.493545 | 8_1:-35125429 | Msa1191180:CDS |
| AGGCTGAAAACTTCGGAGAA+TGG | 0.496139 | 8_1:-35125651 | Msa1191180:CDS |
| GTCAAGAAAGAAACTAGATT+AGG | 0.497958 | 8_1:-35125688 | Msa1191180:CDS |
| GGGAGTTCTGGCTGATCAAA+GGG | 0.502508 | 8_1:+35121501 | None:intergenic |
| TTTATTCCAAACACTGGTCG+TGG | 0.504832 | 8_1:-35123062 | Msa1191180:CDS |
| TCCAGGAGAATAGTTGTCTC+TGG | 0.507302 | 8_1:+35122642 | None:intergenic |
| GTGAATATGTTGTTGGAAGC+AGG | 0.507911 | 8_1:-35122685 | Msa1191180:CDS |
| ACAGAGTGAGTCTCCTCTTA+CGG | 0.512884 | 8_1:-35126052 | Msa1191180:five_prime_UTR |
| CTCGTCATCCTTCACAATGG+CGG | 0.514201 | 8_1:-35125886 | Msa1191180:CDS |
| GGGTAATCTCCAGCTAGCTA+GGG | 0.515264 | 8_1:+35126085 | None:intergenic |
| CTCACTCTGTGTGTAGTGTT+GGG | 0.516394 | 8_1:+35126065 | None:intergenic |
| TGATAATGATGATTTGGTTG+AGG | 0.517380 | 8_1:-35122389 | Msa1191180:CDS |
| TTTGGCAGTTCCTGTCGTAA+AGG | 0.519122 | 8_1:-35123237 | Msa1191180:CDS |
| TATGTTAAAGCAAGGACAAA+GGG | 0.521676 | 8_1:-35121555 | Msa1191180:CDS |
| ATCGGTCCCCGCCATTGTGA+AGG | 0.522242 | 8_1:+35125878 | None:intergenic |
| AAAGGAGAAGGACCATATCA+AGG | 0.526120 | 8_1:-35124722 | Msa1191180:CDS |
| GGGGAGTTCTGGCTGATCAA+AGG | 0.526296 | 8_1:+35121500 | None:intergenic |
| AAGAGCGATGGTGCCGTAAG+AGG | 0.527177 | 8_1:+35126039 | None:intergenic |
| GCATTCAGATCATACATACA+TGG | 0.527313 | 8_1:-35122297 | Msa1191180:CDS |
| TTATGTCGATTGAAAGCCAA+TGG | 0.529524 | 8_1:-35120447 | Msa1191180:three_prime_UTR |
| GATAAACTATGAAAATGAGA+AGG | 0.535170 | 8_1:-35122985 | Msa1191180:CDS |
| AACACTGGTCGTGGAATACA+AGG | 0.537405 | 8_1:-35123053 | Msa1191180:CDS |
| TACTGTTCTGGAAAAGGAGA+AGG | 0.537973 | 8_1:-35124734 | Msa1191180:CDS |
| TCAGCATCTTTGTAAGGCAC+AGG | 0.554993 | 8_1:+35122742 | None:intergenic |
| TGTATCCTTACTACTCTAAG+TGG | 0.558724 | 8_1:-35124334 | Msa1191180:CDS |
| GTTGTCTCTGGCATCTGACT+CGG | 0.558998 | 8_1:+35122654 | None:intergenic |
| GTGAAATAACCTGATTGTTG+TGG | 0.560703 | 8_1:+35125798 | None:intergenic |
| AATAAGAAGGCTGAAAACTT+CGG | 0.562437 | 8_1:-35125658 | Msa1191180:CDS |
| ACGGTGTTACCTTGTTGTGT+TGG | 0.565907 | 8_1:+35125988 | None:intergenic |
| TCGATTGAAAGCCAATGGAA+TGG | 0.566873 | 8_1:-35120442 | Msa1191180:three_prime_UTR |
| TGAACTGAAGCTACTTTAGG+TGG | 0.574866 | 8_1:+35122778 | None:intergenic |
| ACAGATTGGGGTGATGGTGA+TGG | 0.576038 | 8_1:-35122830 | Msa1191180:intron |
| TGCCTTTGAAACTTAATCAG+TGG | 0.577853 | 8_1:-35124292 | Msa1191180:CDS |
| GCCTTCTTTCCAACACAACA+AGG | 0.579588 | 8_1:-35125997 | Msa1191180:intron |
| TAGGCATTTATTCCAAACAC+TGG | 0.579675 | 8_1:-35123068 | Msa1191180:CDS |
| CTTAGCTCCTTGGTGTGACG+AGG | 0.580104 | 8_1:-35122236 | Msa1191180:CDS |
| GAGACAACTATTCTCCTGGA+TGG | 0.582790 | 8_1:-35122639 | Msa1191180:CDS |
| AATGGTCTGGCAGAACTCAT+GGG | 0.584270 | 8_1:-35122952 | Msa1191180:CDS |
| TACAAAGATGCTGATACTCA+AGG | 0.585962 | 8_1:-35122733 | Msa1191180:CDS |
| AAGGAGAAGGACCATATCAA+GGG | 0.586256 | 8_1:-35124721 | Msa1191180:CDS |
| TCATGGTGATGACAAGGGAT+TGG | 0.590460 | 8_1:-35122806 | Msa1191180:CDS |
| TATTCTCAGTGGGAAATGAA+AGG | 0.590826 | 8_1:-35122613 | Msa1191180:CDS |
| TGGATGGAAATATTCTCAGT+GGG | 0.591259 | 8_1:-35122623 | Msa1191180:CDS |
| AGCTCCTTGGTGTGACGAGG+AGG | 0.591730 | 8_1:-35122233 | Msa1191180:intron |
| AAGTTACTAGATCTTGATTG+TGG | 0.596416 | 8_1:-35120681 | Msa1191180:exon |
| TACTACTCTAAGTGGATAAG+GGG | 0.599458 | 8_1:-35124326 | Msa1191180:CDS |
| ATAAACTATGAAAATGAGAA+GGG | 0.599751 | 8_1:-35122984 | Msa1191180:CDS |
| TAACATTTGGTGCAAACCAG+AGG | 0.603359 | 8_1:+35120402 | None:intergenic |
| CGTCATCCTTCACAATGGCG+GGG | 0.607064 | 8_1:-35125884 | Msa1191180:CDS |
| AATGGAACGTGCAAGAGCGA+TGG | 0.607251 | 8_1:+35126027 | None:intergenic |
| GTGGTGCAATGTTGTTAGAT+GGG | 0.608044 | 8_1:-35124273 | Msa1191180:CDS |
| GAGCTTGAGAAGTTTGCTGG+TGG | 0.612213 | 8_1:-35123203 | Msa1191180:CDS |
| CATTCAGATCATACATACAT+GGG | 0.613469 | 8_1:-35122296 | Msa1191180:CDS |
| ATATGTTAAAGCAAGGACAA+AGG | 0.615285 | 8_1:-35121556 | Msa1191180:CDS |
| CAACAACATATTCACAGTTG+CGG | 0.617944 | 8_1:+35122693 | None:intergenic |
| CAATCGACATAAACAAGCTG+TGG | 0.618202 | 8_1:+35120458 | None:intergenic |
| CAGGCAAGCCTGCAAAGAAG+TGG | 0.622850 | 8_1:-35120718 | Msa1191180:CDS |
| ACTTTACACTACCAGTGTTG+AGG | 0.626381 | 8_1:-35123180 | Msa1191180:intron |
| AAAGGAGGAAGCAGATACAG+AGG | 0.626885 | 8_1:-35123616 | Msa1191180:intron |
| CAGTATTAGAAACAAACAGA+GGG | 0.633054 | 8_1:+35124752 | None:intergenic |
| TCAGACACACACCTCAACAC+TGG | 0.635226 | 8_1:+35123169 | None:intergenic |
| CTTGCCTGACGAAAAGCACA+CGG | 0.649401 | 8_1:+35120733 | None:intergenic |
| CTGGATGGAAATATTCTCAG+TGG | 0.651227 | 8_1:-35122624 | Msa1191180:CDS |
| CACTATCACGACGAACAGCA+CGG | 0.655477 | 8_1:+35122428 | None:intergenic |
| GAACAATGCTTATACCTTCG+GGG | 0.657190 | 8_1:+35121481 | None:intergenic |
| GTAATCCACAAATTCAGTGA+AGG | 0.662680 | 8_1:+35120626 | None:intergenic |
| TCCCAAATAGCCATTGACCA+AGG | 0.672878 | 8_1:+35125419 | None:intergenic |
| GATGGTTCATGGTGATGACA+AGG | 0.675247 | 8_1:-35122812 | Msa1191180:CDS |
| TGAGAAGGGAGAGAAAGCAA+TGG | 0.680929 | 8_1:-35122970 | Msa1191180:CDS |
| CTTCGGAGAATGGTATTCCG+AGG | 0.682280 | 8_1:-35125641 | Msa1191180:intron |
| GTGCTCGTCATCCTTCACAA+TGG | 0.693246 | 8_1:-35125889 | Msa1191180:CDS |
| GATCAGCCAGAACTCCCCGA+AGG | 0.697086 | 8_1:-35121495 | Msa1191180:intron |
| CATACCTCCTCGTCACACCA+AGG | 0.697417 | 8_1:+35122229 | None:intergenic |
| ACAGTATTAGAAACAAACAG+AGG | 0.698430 | 8_1:+35124751 | None:intergenic |
| GCAAAGAAGTGGTCATACTG+GGG | 0.701004 | 8_1:-35120707 | Msa1191180:CDS |
| ATGGTTCATGGTGATGACAA+GGG | 0.721801 | 8_1:-35122811 | Msa1191180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAAATATAAAATATT+TGG | + | chr8_1:35122661-35122680 | None:intergenic | 0.0% |
| !! | ATGAATAAATAAATACATTT+GGG | + | chr8_1:35121096-35121115 | None:intergenic | 10.0% |
| !! | AATGAATAAATAAATACATT+TGG | + | chr8_1:35121097-35121116 | None:intergenic | 10.0% |
| !! | AAAATTAAATGAGATTTATT+CGG | + | chr8_1:35123983-35124002 | None:intergenic | 10.0% |
| !! | TTAAATAAGATATATAATTG+AGG | - | chr8_1:35124363-35124382 | Msa1191180:CDS | 10.0% |
| !!! | TTGAAAATTTTCTTATATAT+AGG | - | chr8_1:35125501-35125520 | Msa1191180:intron | 10.0% |
| !! | AATATTCACAAAAATAACTA+TGG | + | chr8_1:35121565-35121584 | None:intergenic | 15.0% |
| !!! | CCATAAAACAAATATTTTTA+AGG | + | chr8_1:35121853-35121872 | None:intergenic | 15.0% |
| !!! | CCTTAAAAATATTTGTTTTA+TGG | - | chr8_1:35121850-35121869 | Msa1191180:intron | 15.0% |
| !! | CTAATTATAATAATATACAC+TGG | + | chr8_1:35124741-35124760 | None:intergenic | 15.0% |
| !! | TGGCTATATATTTAAATTTA+CGG | - | chr8_1:35124804-35124823 | Msa1191180:CDS | 15.0% |
| !! | ATATATTTAAATTTACGGTT+TGG | - | chr8_1:35124809-35124828 | Msa1191180:intron | 15.0% |
| !!! | AGTTTTACTTTGATTTTATA+CGG | - | chr8_1:35125886-35125905 | Msa1191180:CDS | 15.0% |
| !! | TTTATGAATGAATTGAGAAA+CGG | + | chr8_1:35120473-35120492 | None:intergenic | 20.0% |
| !!! | TTGATTTGGATTAATTTTAC+AGG | - | chr8_1:35120938-35120957 | Msa1191180:intron | 20.0% |
| !!! | TTTTACTATGTTATCTCAAT+TGG | - | chr8_1:35121333-35121352 | Msa1191180:intron | 20.0% |
| !!! | TATTTTAAAAACAAATGTGC+AGG | - | chr8_1:35121615-35121634 | Msa1191180:intron | 20.0% |
| !!! | ATCTTCATTTTCTTTATTTC+TGG | + | chr8_1:35121652-35121671 | None:intergenic | 20.0% |
| !!! | ATAATTTTAATATCAGTGCT+AGG | - | chr8_1:35122319-35122338 | Msa1191180:CDS | 20.0% |
| !! | TTCATGAAATAACTATTTGA+TGG | + | chr8_1:35122853-35122872 | None:intergenic | 20.0% |
| !! | TTAGAAAAATGTACTTTCAA+AGG | + | chr8_1:35123113-35123132 | None:intergenic | 20.0% |
| !! | TTCTAAACTATAATTGTTTC+AGG | - | chr8_1:35123136-35123155 | Msa1191180:intron | 20.0% |
| !!! | TTGAGATTTTGGAATTATAT+CGG | - | chr8_1:35123162-35123181 | Msa1191180:intron | 20.0% |
| !! | ATAAACTATGAAAATGAGAA+GGG | - | chr8_1:35123455-35123474 | Msa1191180:intron | 20.0% |
| !! | ATGACTAAAAAAACAAAACT+TGG | + | chr8_1:35124291-35124310 | None:intergenic | 20.0% |
| !!! | TTTTAGTCATTTCATTGTTT+TGG | - | chr8_1:35124301-35124320 | Msa1191180:CDS | 20.0% |
| !! | ATATCAAAATATTACGCATA+CGG | + | chr8_1:35124774-35124793 | None:intergenic | 20.0% |
| !!! | TGGTTTCTTTTCTTATATAA+AGG | + | chr8_1:35125275-35125294 | None:intergenic | 20.0% |
| !!! | TTGTGACTTTTTCTTATAAA+TGG | - | chr8_1:35125464-35125483 | Msa1191180:CDS | 20.0% |
| !!! | TGTGACTTTTTCTTATAAAT+GGG | - | chr8_1:35125465-35125484 | Msa1191180:CDS | 20.0% |
| !!! | AATTTTCTTATATATAGGAC+CGG | - | chr8_1:35125506-35125525 | Msa1191180:intron | 20.0% |
| ! | AATTCAATTGAATTGTACCT+CGG | + | chr8_1:35120818-35120837 | None:intergenic | 25.0% |
| !!! | TTTTCACCTGATTTGTTTTT+AGG | - | chr8_1:35120848-35120867 | Msa1191180:intron | 25.0% |
| !!! | TTTTCATTTTTGACTAGTGT+AGG | - | chr8_1:35120895-35120914 | Msa1191180:intron | 25.0% |
| ! | ATTGAGTACTATGATATTTC+TGG | - | chr8_1:35120981-35121000 | Msa1191180:intron | 25.0% |
| ! | TTAGTTGTTGATCTATACTA+AGG | - | chr8_1:35121115-35121134 | Msa1191180:intron | 25.0% |
| ! | AGAAAAAATTGTGCTATAAC+TGG | + | chr8_1:35121209-35121228 | None:intergenic | 25.0% |
| !!! | TGGTTGTGTTTTTAGAATAA+AGG | - | chr8_1:35121790-35121809 | Msa1191180:intron | 25.0% |
| ! | AAAAAATAATGCCTGATGAA+TGG | + | chr8_1:35122209-35122228 | None:intergenic | 25.0% |
| !!! | AAATTTGCTATAACAGAGAA+AGG | + | chr8_1:35122250-35122269 | None:intergenic | 25.0% |
| ! | AAGAAATTGAGAGTTGAAAA+GGG | + | chr8_1:35122361-35122380 | None:intergenic | 25.0% |
| ! | TAAGAAATTGAGAGTTGAAA+AGG | + | chr8_1:35122362-35122381 | None:intergenic | 25.0% |
| ! | TTCAACTCTCAATTTCTTAT+TGG | - | chr8_1:35122363-35122382 | Msa1191180:CDS | 25.0% |
| ! | TCAACTCTCAATTTCTTATT+GGG | - | chr8_1:35122364-35122383 | Msa1191180:CDS | 25.0% |
| ! | TTATTGGGTGAAATTCATTT+GGG | + | chr8_1:35122449-35122468 | None:intergenic | 25.0% |
| !!! | CTTATACCAATTTTAATTGC+AGG | - | chr8_1:35122756-35122775 | Msa1191180:CDS | 25.0% |
| !! | ACTGCATTAATTTTCATCTT+TGG | - | chr8_1:35122904-35122923 | Msa1191180:intron | 25.0% |
| !! | TTTTGATGTAAATTCTTCCT+AGG | - | chr8_1:35123352-35123371 | Msa1191180:intron | 25.0% |
| ! | GATAAACTATGAAAATGAGA+AGG | - | chr8_1:35123454-35123473 | Msa1191180:intron | 25.0% |
| !!! | AATCTCATTTAATTTTGCAC+AGG | - | chr8_1:35123987-35124006 | Msa1191180:intron | 25.0% |
| ! | CTATCTTAAAATCTGGATTA+TGG | + | chr8_1:35124260-35124279 | None:intergenic | 25.0% |
| ! | AAGCATACTATCTTAAAATC+TGG | + | chr8_1:35124267-35124286 | None:intergenic | 25.0% |
| !!! | GCGTTGTTTTTTTATTTAAC+TGG | + | chr8_1:35124545-35124564 | None:intergenic | 25.0% |
| ! | CAAGTTCATAATAAAACTGA+AGG | - | chr8_1:35124653-35124672 | Msa1191180:intron | 25.0% |
| ! | AATAATATACACTGGACAAT+CGG | + | chr8_1:35124733-35124752 | None:intergenic | 25.0% |
| !! | TTTTCTTGGTAAACTGTTAT+TGG | - | chr8_1:35124834-35124853 | Msa1191180:intron | 25.0% |
| !!! | TTATTGGTTTATAATGCTTC+AGG | - | chr8_1:35124850-35124869 | Msa1191180:intron | 25.0% |
| ! | TGGAAAAATATGTTAAAGCA+AGG | - | chr8_1:35124876-35124895 | Msa1191180:intron | 25.0% |
| !! | TCTTTTCTTATATAAAGGAC+CGG | + | chr8_1:35125270-35125289 | None:intergenic | 25.0% |
| !! | TTGTTGTGTTTTGTTGTCAT+CGG | + | chr8_1:35120582-35120601 | None:intergenic | 30.0% |
| !!! | TGGTTGTTTTGGTTGTTTTT+GGG | + | chr8_1:35120618-35120637 | None:intergenic | 30.0% |
| !!! | TTGGTTGTTTTGGTTGTTTT+TGG | + | chr8_1:35120619-35120638 | None:intergenic | 30.0% |
| CATTCCACGTTTCAATTTAA+CGG | - | chr8_1:35120691-35120710 | Msa1191180:exon | 30.0% | |
| GTCAAGAAAGAAACTAGATT+AGG | - | chr8_1:35120751-35120770 | Msa1191180:intron | 30.0% | |
| ATTAGGTTTGACCAATAAGA+AGG | - | chr8_1:35120768-35120787 | Msa1191180:intron | 30.0% | |
| AATAAGAAGGCTGAAAACTT+CGG | - | chr8_1:35120781-35120800 | Msa1191180:intron | 30.0% | |
| GTTTGACCTAAAAACAAATC+AGG | + | chr8_1:35120857-35120876 | None:intergenic | 30.0% | |
| ! | TTAGGTCAAACTTGTTTATC+TGG | - | chr8_1:35120866-35120885 | Msa1191180:intron | 30.0% |
| ! | ATTTTACAGGTTGTTGTGAA+TGG | - | chr8_1:35120951-35120970 | Msa1191180:intron | 30.0% |
| ! | TTTTACAGGTTGTTGTGAAT+GGG | - | chr8_1:35120952-35120971 | Msa1191180:intron | 30.0% |
| TGTTGATCTATACTAAGGTT+CGG | - | chr8_1:35121120-35121139 | Msa1191180:intron | 30.0% | |
| !! | AAAACCAATTTTCGAGCTTA+CGG | - | chr8_1:35121149-35121168 | Msa1191180:intron | 30.0% |
| !!! | CTGGTCTATTTTAGTCATAA+GGG | + | chr8_1:35121190-35121209 | None:intergenic | 30.0% |
| !!! | ACTGGTCTATTTTAGTCATA+AGG | + | chr8_1:35121191-35121210 | None:intergenic | 30.0% |
| CAGTATTAGAAACAAACAGA+GGG | + | chr8_1:35121690-35121709 | None:intergenic | 30.0% | |
| ACAGTATTAGAAACAAACAG+AGG | + | chr8_1:35121691-35121710 | None:intergenic | 30.0% | |
| !! | GTTTGTTTCTAATACTGTTC+TGG | - | chr8_1:35121693-35121712 | Msa1191180:intron | 30.0% |
| !! | TTCTAATACTGTTCTGGAAA+AGG | - | chr8_1:35121699-35121718 | Msa1191180:intron | 30.0% |
| TAAATAGTCACAGCAAAATC+AGG | + | chr8_1:35121955-35121974 | None:intergenic | 30.0% | |
| TAAATCAGATTCTCCAGATT+TGG | + | chr8_1:35122045-35122064 | None:intergenic | 30.0% | |
| TACATAACAGTTTCACTAGT+TGG | + | chr8_1:35122089-35122108 | None:intergenic | 30.0% | |
| TTACTACTCTAAGTGGATAA+GGG | - | chr8_1:35122112-35122131 | Msa1191180:intron | 30.0% | |
| CTCTGTTATAGCAAATTTGT+TGG | - | chr8_1:35122252-35122271 | Msa1191180:CDS | 30.0% | |
| GAAATAGACACTACATAAAG+TGG | + | chr8_1:35122411-35122430 | None:intergenic | 30.0% | |
| TAGTGTCTATTTCGTGATTA+TGG | - | chr8_1:35122418-35122437 | Msa1191180:CDS | 30.0% | |
| CTTATTGGGTGAAATTCATT+TGG | + | chr8_1:35122450-35122469 | None:intergenic | 30.0% | |
| ACAATGCTGAATGTTAAAAG+AGG | + | chr8_1:35122520-35122539 | None:intergenic | 30.0% | |
| TCATGCACATTTACTTCATA+TGG | - | chr8_1:35122706-35122725 | Msa1191180:CDS | 30.0% | |
| ACTTGTGTATAATCCATTTC+AGG | - | chr8_1:35122730-35122749 | Msa1191180:CDS | 30.0% | |
| CTTGTGTATAATCCATTTCA+GGG | - | chr8_1:35122731-35122750 | Msa1191180:CDS | 30.0% | |
| !! | GTGTATCTATGAAGAGTATT+TGG | - | chr8_1:35123184-35123203 | Msa1191180:CDS | 30.0% |
| TGATACAGAAAACTTGACAA+TGG | + | chr8_1:35123309-35123328 | None:intergenic | 30.0% | |
| ! | TGCTTATTTGCTAAATCCTT+GGG | + | chr8_1:35123877-35123896 | None:intergenic | 30.0% |
| TTTCTGCAAATTAGTGCAAT+AGG | + | chr8_1:35123915-35123934 | None:intergenic | 30.0% | |
| !! | CGACATTGATAATGATGATT+TGG | - | chr8_1:35124044-35124063 | Msa1191180:intron | 30.0% |
| !! | TGATAATGATGATTTGGTTG+AGG | - | chr8_1:35124050-35124069 | Msa1191180:intron | 30.0% |
| CATTCAGATCATACATACAT+GGG | - | chr8_1:35124143-35124162 | Msa1191180:intron | 30.0% | |
| AAAAAAACAACGCATGTGAT+TGG | - | chr8_1:35124552-35124571 | Msa1191180:intron | 30.0% | |
| TGGACTAATCGGATTTATAT+TGG | - | chr8_1:35124572-35124591 | Msa1191180:intron | 30.0% | |
| !! | ATTTTGATATGTCTGCTCAT+TGG | - | chr8_1:35124784-35124803 | Msa1191180:CDS | 30.0% |
| ATATGTTAAAGCAAGGACAA+AGG | - | chr8_1:35124883-35124902 | Msa1191180:intron | 30.0% | |
| TATGTTAAAGCAAGGACAAA+GGG | - | chr8_1:35124884-35124903 | Msa1191180:intron | 30.0% | |
| TTGAACAATGCTTATACCTT+CGG | + | chr8_1:35124963-35124982 | None:intergenic | 30.0% | |
| ACACTCAAGTTATTAAGAGA+CGG | + | chr8_1:35125022-35125041 | None:intergenic | 30.0% | |
| !!! | GTCTTGGTTTTGATGATTTT+TGG | + | chr8_1:35125295-35125314 | None:intergenic | 30.0% |
| ATATACCCACTATTGTTGAA+AGG | - | chr8_1:35125385-35125404 | Msa1191180:intron | 30.0% | |
| AAAGGACCAACATTAAATGA+GGG | - | chr8_1:35125403-35125422 | Msa1191180:intron | 30.0% | |
| AATTAACCATAGTATAGAGC+AGG | + | chr8_1:35125594-35125613 | None:intergenic | 30.0% | |
| AAGTTACTAGATCTTGATTG+TGG | - | chr8_1:35125758-35125777 | Msa1191180:intron | 30.0% | |
| TTGTTCAATTTCCATTCCAT+TGG | + | chr8_1:35126011-35126030 | None:intergenic | 30.0% | |
| ! | CAGTTCTCTTTTGTAACATT+TGG | + | chr8_1:35126053-35126072 | None:intergenic | 30.0% |
| CTTCTTCTTCAATTCCTCAT+CGG | - | chr8_1:35120501-35120520 | Msa1191180:three_prime_UTR | 35.0% | |
| ! | GGTAACATTCTGTTTCTCAT+CGG | - | chr8_1:35120522-35120541 | Msa1191180:three_prime_UTR | 35.0% |
| !!! | GGTTGTTTTGGTTGTTTTTG+GGG | + | chr8_1:35120617-35120636 | None:intergenic | 35.0% |
| !!! | TGTTGTGGTTTTGGTTGTTT+TGG | + | chr8_1:35120629-35120648 | None:intergenic | 35.0% |
| ! | TAACCTGATTGTTGTGGTTT+TGG | + | chr8_1:35120638-35120657 | None:intergenic | 35.0% |
| GTGAAATAACCTGATTGTTG+TGG | + | chr8_1:35120644-35120663 | None:intergenic | 35.0% | |
| AAAGAACGTGTAGGAAGATT+GGG | + | chr8_1:35120670-35120689 | None:intergenic | 35.0% | |
| TAAAGAACGTGTAGGAAGAT+TGG | + | chr8_1:35120671-35120690 | None:intergenic | 35.0% | |
| !!! | AACGGCCAAAACTTTTTTGT+AGG | - | chr8_1:35120709-35120728 | Msa1191180:CDS | 35.0% |
| ! | CACCACCTACAAAAAAGTTT+TGG | + | chr8_1:35120717-35120736 | None:intergenic | 35.0% |
| !!! | CAAAACTTTTTTGTAGGTGG+TGG | - | chr8_1:35120715-35120734 | Msa1191180:CDS | 35.0% |
| ! | GAAGTTTTCAGCCTTCTTAT+TGG | + | chr8_1:35120782-35120801 | None:intergenic | 35.0% |
| !! | GCTGTGTTTGACTTTTGATT+TGG | - | chr8_1:35120924-35120943 | Msa1191180:intron | 35.0% |
| TTTACAGGTTGTTGTGAATG+GGG | - | chr8_1:35120953-35120972 | Msa1191180:intron | 35.0% | |
| ! | ATCTATACTAAGGTTCGGTT+TGG | - | chr8_1:35121125-35121144 | Msa1191180:intron | 35.0% |
| !! | TAAGAAGCGTTTGAGCTTAT+AGG | - | chr8_1:35121282-35121301 | Msa1191180:intron | 35.0% |
| CTAACTGATAGCAGATAAAC+CGG | + | chr8_1:35121475-35121494 | None:intergenic | 35.0% | |
| TGTAGATTGTTCAACGAGTT+TGG | - | chr8_1:35121770-35121789 | Msa1191180:intron | 35.0% | |
| TGTATCCTTACTACTCTAAG+TGG | - | chr8_1:35122105-35122124 | Msa1191180:intron | 35.0% | |
| CTTATCCACTTAGAGTAGTA+AGG | + | chr8_1:35122113-35122132 | None:intergenic | 35.0% | |
| CTTACTACTCTAAGTGGATA+AGG | - | chr8_1:35122111-35122130 | Msa1191180:intron | 35.0% | |
| TACTACTCTAAGTGGATAAG+GGG | - | chr8_1:35122113-35122132 | Msa1191180:intron | 35.0% | |
| !! | TGCCTTTGAAACTTAATCAG+TGG | - | chr8_1:35122147-35122166 | Msa1191180:intron | 35.0% |
| ! | CACCACTGATTAAGTTTCAA+AGG | + | chr8_1:35122152-35122171 | None:intergenic | 35.0% |
| ! | AGAAAGGAAAGCATGGTTAA+AGG | + | chr8_1:35122234-35122253 | None:intergenic | 35.0% |
| ATAACAGAGAAAGGAAAGCA+TGG | + | chr8_1:35122241-35122260 | None:intergenic | 35.0% | |
| !! | TATAGCAAATTTGTTGGCTG+TGG | - | chr8_1:35122258-35122277 | Msa1191180:CDS | 35.0% |
| TCTTATTGGGTGAAATCATG+TGG | - | chr8_1:35122377-35122396 | Msa1191180:CDS | 35.0% | |
| CATCACCAGATGATTCATAA+AGG | + | chr8_1:35122581-35122600 | None:intergenic | 35.0% | |
| TTGGTATAAGTACCCTGAAA+TGG | + | chr8_1:35122746-35122765 | None:intergenic | 35.0% | |
| ACGACTCCTGCAATTAAAAT+TGG | + | chr8_1:35122765-35122784 | None:intergenic | 35.0% | |
| GATAGAAAATCTGTGAGTGT+GGG | + | chr8_1:35123091-35123110 | None:intergenic | 35.0% | |
| !!! | GTTTCAGGTTCTTGAGATTT+TGG | - | chr8_1:35123151-35123170 | Msa1191180:intron | 35.0% |
| ! | AGTGTTTGGAATAAATGCCT+AGG | + | chr8_1:35123372-35123391 | None:intergenic | 35.0% |
| TAGGCATTTATTCCAAACAC+TGG | - | chr8_1:35123371-35123390 | Msa1191180:intron | 35.0% | |
| !!! | TTTGCGCTTTTTCAACAGAT+TGG | - | chr8_1:35123595-35123614 | Msa1191180:intron | 35.0% |
| !!! | TTGCGCTTTTTCAACAGATT+GGG | - | chr8_1:35123596-35123615 | Msa1191180:intron | 35.0% |
| ! | ACTTGAACTGAAGCTACTTT+AGG | + | chr8_1:35123667-35123686 | None:intergenic | 35.0% |
| TGAGTATCAGCATCTTTGTA+AGG | + | chr8_1:35123706-35123725 | None:intergenic | 35.0% | |
| TACAAAGATGCTGATACTCA+AGG | - | chr8_1:35123706-35123725 | Msa1191180:intron | 35.0% | |
| CAACAACATATTCACAGTTG+CGG | + | chr8_1:35123749-35123768 | None:intergenic | 35.0% | |
| TGGATGGAAATATTCTCAGT+GGG | - | chr8_1:35123816-35123835 | Msa1191180:intron | 35.0% | |
| TATTCTCAGTGGGAAATGAA+AGG | - | chr8_1:35123826-35123845 | Msa1191180:intron | 35.0% | |
| !! | AAATGAAAGGTGTTCCTCTA+AGG | - | chr8_1:35123839-35123858 | Msa1191180:intron | 35.0% |
| ! | GTTCCTCTAAGGATTGAAAT+CGG | - | chr8_1:35123850-35123869 | Msa1191180:intron | 35.0% |
| ! | TTCCTCTAAGGATTGAAATC+GGG | - | chr8_1:35123851-35123870 | Msa1191180:intron | 35.0% |
| ! | CTGCTTATTTGCTAAATCCT+TGG | + | chr8_1:35123878-35123897 | None:intergenic | 35.0% |
| CAAGGATTTAGCAAATAAGC+AGG | - | chr8_1:35123876-35123895 | Msa1191180:intron | 35.0% | |
| GCATTCAGATCATACATACA+TGG | - | chr8_1:35124142-35124161 | Msa1191180:intron | 35.0% | |
| AAAAGATGATCTTAGCTCCT+TGG | - | chr8_1:35124193-35124212 | Msa1191180:intron | 35.0% | |
| ATTTAACCTCAATCAGAGTG+TGG | + | chr8_1:35124349-35124368 | None:intergenic | 35.0% | |
| AAAGGGTTTACTTACCAACT+GGG | + | chr8_1:35124467-35124486 | None:intergenic | 35.0% | |
| CAGGCGTTTAGAAATAGAAA+GGG | + | chr8_1:35124484-35124503 | None:intergenic | 35.0% | |
| ACAGGCGTTTAGAAATAGAA+AGG | + | chr8_1:35124485-35124504 | None:intergenic | 35.0% | |
| !!! | TTTACGGTTTGGTGTTTTCT+TGG | - | chr8_1:35124820-35124839 | Msa1191180:intron | 35.0% |
| TTGGTTTATAATGCTTCAGG+AGG | - | chr8_1:35124853-35124872 | Msa1191180:intron | 35.0% | |
| TGAACAATGCTTATACCTTC+GGG | + | chr8_1:35124962-35124981 | None:intergenic | 35.0% | |
| ! | AGGTATAAGCATTGTTCAAG+TGG | - | chr8_1:35124964-35124983 | Msa1191180:intron | 35.0% |
| TTTGTGCATGCTTGGTATTA+CGG | - | chr8_1:35125166-35125185 | Msa1191180:intron | 35.0% | |
| ATACCAAACATGCGCTTAAT+AGG | - | chr8_1:35125221-35125240 | Msa1191180:intron | 35.0% | |
| TTCTTATATAAAGGACCGGA+GGG | + | chr8_1:35125266-35125285 | None:intergenic | 35.0% | |
| TTTCTTATATAAAGGACCGG+AGG | + | chr8_1:35125267-35125286 | None:intergenic | 35.0% | |
| GCAACAACTAATGATTGTCT+TGG | + | chr8_1:35125311-35125330 | None:intergenic | 35.0% | |
| TTGGTCCTTTCAACAATAGT+GGG | + | chr8_1:35125393-35125412 | None:intergenic | 35.0% | |
| GAAAGGACCAACATTAAATG+AGG | - | chr8_1:35125402-35125421 | Msa1191180:intron | 35.0% | |
| TTCTAGCCCTCATTTAATGT+TGG | + | chr8_1:35125412-35125431 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | - | chr8_1:35125509-35125528 | Msa1191180:intron | 35.0% | |
| TTCTTATATATAGGACCGGA+GGG | - | chr8_1:35125510-35125529 | Msa1191180:intron | 35.0% | |
| GAGTATATTCATGCATGTGA+CGG | - | chr8_1:35125532-35125551 | Msa1191180:intron | 35.0% | |
| TATGAACCTGCTCTATACTA+TGG | - | chr8_1:35125585-35125604 | Msa1191180:intron | 35.0% | |
| GAAGCTAGTTCACCATTTAA+TGG | - | chr8_1:35125788-35125807 | Msa1191180:intron | 35.0% | |
| GTAATCCACAAATTCAGTGA+AGG | + | chr8_1:35125816-35125835 | None:intergenic | 35.0% | |
| GGCATAGTATTCAATTGATC+AGG | + | chr8_1:35125955-35125974 | None:intergenic | 35.0% | |
| ATAAACAAGCTGTGGTCAAA+AGG | + | chr8_1:35125976-35125995 | None:intergenic | 35.0% | |
| ! | TTATGTCGATTGAAAGCCAA+TGG | - | chr8_1:35125992-35126011 | Msa1191180:intron | 35.0% |
| AATTGAACAATCCAATCCTC+TGG | - | chr8_1:35126021-35126040 | Msa1191180:five_prime_UTR | 35.0% | |
| AATCAAAAACCCTAGCTAGC+TGG | - | chr8_1:35120345-35120364 | Msa1191180:three_prime_UTR | 40.0% | |
| ! | ACCTTGTTGTGTTGGAAAGA+AGG | + | chr8_1:35120446-35120465 | None:intergenic | 40.0% |
| GAAACAGAATGTTACCGATG+AGG | + | chr8_1:35120518-35120537 | None:intergenic | 40.0% | |
| !!! | TTGTTTTTGGGGTTTTGCAG+CGG | + | chr8_1:35120606-35120625 | None:intergenic | 40.0% |
| CAACCAAAACCACAACAATC+AGG | - | chr8_1:35120632-35120651 | Msa1191180:three_prime_UTR | 40.0% | |
| GTGGAATGTAAAGAACGTGT+AGG | + | chr8_1:35120679-35120698 | None:intergenic | 40.0% | |
| TTGGCCGTTAAATTGAAACG+TGG | + | chr8_1:35120698-35120717 | None:intergenic | 40.0% | |
| !!! | GGCCAAAACTTTTTTGTAGG+TGG | - | chr8_1:35120712-35120731 | Msa1191180:CDS | 40.0% |
| ACCTTGGTCAATGGCTATTT+GGG | - | chr8_1:35121019-35121038 | Msa1191180:intron | 40.0% | |
| GATAAACCGGCTGATATTAG+CGG | + | chr8_1:35121462-35121481 | None:intergenic | 40.0% | |
| ATCCATGTCTGACTAAGCTT+AGG | + | chr8_1:35121533-35121552 | None:intergenic | 40.0% | |
| !! | TACTGTTCTGGAAAAGGAGA+AGG | - | chr8_1:35121705-35121724 | Msa1191180:intron | 40.0% |
| AAAGGAGAAGGACCATATCA+AGG | - | chr8_1:35121717-35121736 | Msa1191180:intron | 40.0% | |
| AAGGAGAAGGACCATATCAA+GGG | - | chr8_1:35121718-35121737 | Msa1191180:intron | 40.0% | |
| ATTTAAGTGACTCTCACCTC+TGG | + | chr8_1:35121751-35121770 | None:intergenic | 40.0% | |
| ! | AAATGTTTTGCCCTTTACCC+AGG | - | chr8_1:35122007-35122026 | Msa1191180:intron | 40.0% |
| CTAGTTGGACGAATAGCAAT+AGG | + | chr8_1:35122074-35122093 | None:intergenic | 40.0% | |
| AGTGGTGCAATGTTGTTAGA+TGG | - | chr8_1:35122165-35122184 | Msa1191180:intron | 40.0% | |
| GTGGTGCAATGTTGTTAGAT+GGG | - | chr8_1:35122166-35122185 | Msa1191180:intron | 40.0% | |
| TAATGCCTGATGAATGGTGT+GGG | + | chr8_1:35122203-35122222 | None:intergenic | 40.0% | |
| ATAATGCCTGATGAATGGTG+TGG | + | chr8_1:35122204-35122223 | None:intergenic | 40.0% | |
| TCAACACTCGCACTCTTATT+GGG | + | chr8_1:35122464-35122483 | None:intergenic | 40.0% | |
| TTCAACACTCGCACTCTTAT+TGG | + | chr8_1:35122465-35122484 | None:intergenic | 40.0% | |
| CGCTTCCTTTATGAATCATC+TGG | - | chr8_1:35122573-35122592 | Msa1191180:intron | 40.0% | |
| ! | TGGTGATGATTCCAGTGAAT+TGG | - | chr8_1:35122593-35122612 | Msa1191180:intron | 40.0% |
| TTTCTTGCAAAGCAGCTTCA+CGG | + | chr8_1:35122622-35122641 | None:intergenic | 40.0% | |
| !! | ACACACTGCTTTTGCAACAA+AGG | - | chr8_1:35122805-35122824 | Msa1191180:CDS | 40.0% |
| CACTACAAAACCACAAGAGA+AGG | + | chr8_1:35122994-35123013 | None:intergenic | 40.0% | |
| GGATAGAAAATCTGTGAGTG+TGG | + | chr8_1:35123092-35123111 | None:intergenic | 40.0% | |
| ACTTTACACTACCAGTGTTG+AGG | - | chr8_1:35123259-35123278 | Msa1191180:CDS | 40.0% | |
| TTTATTCCAAACACTGGTCG+TGG | - | chr8_1:35123377-35123396 | Msa1191180:intron | 40.0% | |
| AGGTGCAACTTCTCATTGTT+TGG | - | chr8_1:35123406-35123425 | Msa1191180:intron | 40.0% | |
| GGTGCAACTTCTCATTGTTT+GGG | - | chr8_1:35123407-35123426 | Msa1191180:intron | 40.0% | |
| GCTTACAGTTCGAGTACTAT+AGG | + | chr8_1:35123513-35123532 | None:intergenic | 40.0% | |
| !!! | TGCGCTTTTTCAACAGATTG+GGG | - | chr8_1:35123597-35123616 | Msa1191180:intron | 40.0% |
| ! | TTTTCAACAGATTGGGGTGA+TGG | - | chr8_1:35123603-35123622 | Msa1191180:intron | 40.0% |
| ! | ATGGTTCATGGTGATGACAA+GGG | - | chr8_1:35123628-35123647 | Msa1191180:CDS | 40.0% |
| ! | TGAACTGAAGCTACTTTAGG+TGG | + | chr8_1:35123664-35123683 | None:intergenic | 40.0% |
| CGCAACTGTGAATATGTTGT+TGG | - | chr8_1:35123747-35123766 | Msa1191180:intron | 40.0% | |
| GTGAATATGTTGTTGGAAGC+AGG | - | chr8_1:35123754-35123773 | Msa1191180:intron | 40.0% | |
| CACTGAGAATATTTCCATCC+AGG | + | chr8_1:35123817-35123836 | None:intergenic | 40.0% | |
| CTGGATGGAAATATTCTCAG+TGG | - | chr8_1:35123815-35123834 | Msa1191180:intron | 40.0% | |
| GAAAGGGTTTACTTACCAAC+TGG | + | chr8_1:35124468-35124487 | None:intergenic | 40.0% | |
| !! | TGTCTGTTGGTTTCTGTATC+AGG | - | chr8_1:35124506-35124525 | Msa1191180:intron | 40.0% |
| ACGCATGTGATTGGACTAAT+CGG | - | chr8_1:35124561-35124580 | Msa1191180:intron | 40.0% | |
| CATTCAAAGTGCAAGATGGA+AGG | + | chr8_1:35124630-35124649 | None:intergenic | 40.0% | |
| ! | GTGTCATTCAAAGTGCAAGA+TGG | + | chr8_1:35124634-35124653 | None:intergenic | 40.0% |
| GTTTATAATGCTTCAGGAGG+TGG | - | chr8_1:35124856-35124875 | Msa1191180:intron | 40.0% | |
| GAACAATGCTTATACCTTCG+GGG | + | chr8_1:35124961-35124980 | None:intergenic | 40.0% | |
| AGTTATTAAGAGACGGAGGT+AGG | + | chr8_1:35125015-35125034 | None:intergenic | 40.0% | |
| CTCAAGTTATTAAGAGACGG+AGG | + | chr8_1:35125019-35125038 | None:intergenic | 40.0% | |
| !! | TGTCTCATTTGAGTTGTGCA+TGG | - | chr8_1:35125039-35125058 | Msa1191180:intron | 40.0% |
| TCTCCTATTAAGCGCATGTT+TGG | + | chr8_1:35125227-35125246 | None:intergenic | 40.0% | |
| AACATGCGCTTAATAGGAGA+CGG | - | chr8_1:35125227-35125246 | Msa1191180:intron | 40.0% | |
| GTTGGTCCTTTCAACAATAG+TGG | + | chr8_1:35125394-35125413 | None:intergenic | 40.0% | |
| ATGCATGAATATACTCCCTC+CGG | + | chr8_1:35125528-35125547 | None:intergenic | 40.0% | |
| CCTAAAAGGTCAACAACACA+AGG | + | chr8_1:35125684-35125703 | None:intergenic | 40.0% | |
| !! | CCTTGTGTTGTTGACCTTTT+AGG | - | chr8_1:35125681-35125700 | Msa1191180:CDS | 40.0% |
| TGCAAAGAAGTGGTCATACT+GGG | - | chr8_1:35125731-35125750 | Msa1191180:intron | 40.0% | |
| !! | TCAGTGAAGGCACCATTAAA+TGG | + | chr8_1:35125803-35125822 | None:intergenic | 40.0% |
| CAATCGACATAAACAAGCTG+TGG | + | chr8_1:35125984-35126003 | None:intergenic | 40.0% | |
| TCGATTGAAAGCCAATGGAA+TGG | - | chr8_1:35125997-35126016 | Msa1191180:intron | 40.0% | |
| !! | TAACATTTGGTGCAAACCAG+AGG | + | chr8_1:35126040-35126059 | None:intergenic | 40.0% |
| ! | AGAACTGCGTCTTTTCTTTC+TGG | - | chr8_1:35126066-35126085 | Msa1191180:five_prime_UTR | 40.0% |
| CTCACTCTGTGTGTAGTGTT+GGG | + | chr8_1:35120377-35120396 | None:intergenic | 45.0% | |
| ACTCACTCTGTGTGTAGTGT+TGG | + | chr8_1:35120378-35120397 | None:intergenic | 45.0% | |
| ACAGAGTGAGTCTCCTCTTA+CGG | - | chr8_1:35120387-35120406 | Msa1191180:three_prime_UTR | 45.0% | |
| GCCTTCTTTCCAACACAACA+AGG | - | chr8_1:35120442-35120461 | Msa1191180:three_prime_UTR | 45.0% | |
| !! | ACGGTGTTACCTTGTTGTGT+TGG | + | chr8_1:35120454-35120473 | None:intergenic | 45.0% |
| !! | TGTAGGTGGTGGAAAGAAGA+AGG | - | chr8_1:35120726-35120745 | Msa1191180:CDS | 45.0% |
| AGGCTGAAAACTTCGGAGAA+TGG | - | chr8_1:35120788-35120807 | Msa1191180:intron | 45.0% | |
| GTTGCTACATTCTCAGACCT+TGG | - | chr8_1:35121003-35121022 | Msa1191180:intron | 45.0% | |
| CATTCTCAGACCTTGGTCAA+TGG | - | chr8_1:35121010-35121029 | Msa1191180:intron | 45.0% | |
| GACCTTGGTCAATGGCTATT+TGG | - | chr8_1:35121018-35121037 | Msa1191180:intron | 45.0% | |
| TCCCAAATAGCCATTGACCA+AGG | + | chr8_1:35121023-35121042 | None:intergenic | 45.0% | |
| TGCACCGTAAGCTCGAAAAT+TGG | + | chr8_1:35121156-35121175 | None:intergenic | 45.0% | |
| GTTCAACCGCTAATATCAGC+CGG | - | chr8_1:35121453-35121472 | Msa1191180:intron | 45.0% | |
| AGCCTAAGCTTAGTCAGACA+TGG | - | chr8_1:35121528-35121547 | Msa1191180:CDS | 45.0% | |
| CTGGAGCAAAACCCTTGATA+TGG | + | chr8_1:35121732-35121751 | None:intergenic | 45.0% | |
| ! | TATCAAGGGTTTTGCTCCAG+AGG | - | chr8_1:35121732-35121751 | Msa1191180:intron | 45.0% |
| ACCAATCAGCATGACATGCA+GGG | + | chr8_1:35121825-35121844 | None:intergenic | 45.0% | |
| AACCAATCAGCATGACATGC+AGG | + | chr8_1:35121826-35121845 | None:intergenic | 45.0% | |
| ATGCTGCTGATAGAAGGACT+AGG | + | chr8_1:35121877-35121896 | None:intergenic | 45.0% | |
| CATAGCATGCTGCTGATAGA+AGG | + | chr8_1:35121883-35121902 | None:intergenic | 45.0% | |
| ! | AAGGAAGCGTGCAGAATTCA+AGG | + | chr8_1:35122562-35122581 | None:intergenic | 45.0% |
| CGTGAGTTTCTTTGGCAAGA+AGG | - | chr8_1:35122782-35122801 | Msa1191180:CDS | 45.0% | |
| !! | CACTGCTTTTGCAACAAAGG+AGG | - | chr8_1:35122808-35122827 | Msa1191180:CDS | 45.0% |
| AAAGGAGGAAGCAGATACAG+AGG | - | chr8_1:35122823-35122842 | Msa1191180:CDS | 45.0% | |
| TGTGTGTGTACCTTCTCTTG+TGG | - | chr8_1:35122981-35123000 | Msa1191180:CDS | 45.0% | |
| AGAAAATCTGTGAGTGTGGG+TGG | + | chr8_1:35123088-35123107 | None:intergenic | 45.0% | |
| TTTGGCAGTTCCTGTCGTAA+AGG | - | chr8_1:35123202-35123221 | Msa1191180:CDS | 45.0% | |
| TTGGCAGTTCCTGTCGTAAA+GGG | - | chr8_1:35123203-35123222 | Msa1191180:CDS | 45.0% | |
| ! | CTTTTCTTGCCCTTTACGAC+AGG | + | chr8_1:35123215-35123234 | None:intergenic | 45.0% |
| AGTGAGCTTGAGAAGTTTGC+TGG | - | chr8_1:35123233-35123252 | Msa1191180:CDS | 45.0% | |
| TGTATTCCACGACCAGTGTT+TGG | + | chr8_1:35123386-35123405 | None:intergenic | 45.0% | |
| AACACTGGTCGTGGAATACA+AGG | - | chr8_1:35123386-35123405 | Msa1191180:intron | 45.0% | |
| TGAGAAGGGAGAGAAAGCAA+TGG | - | chr8_1:35123469-35123488 | Msa1191180:intron | 45.0% | |
| AATGGTCTGGCAGAACTCAT+GGG | - | chr8_1:35123487-35123506 | Msa1191180:intron | 45.0% | |
| ! | GATGGTTCATGGTGATGACA+AGG | - | chr8_1:35123627-35123646 | Msa1191180:CDS | 45.0% |
| ! | TCATGGTGATGACAAGGGAT+TGG | - | chr8_1:35123633-35123652 | Msa1191180:CDS | 45.0% |
| TCAGCATCTTTGTAAGGCAC+AGG | + | chr8_1:35123700-35123719 | None:intergenic | 45.0% | |
| CATATTCACAGTTGCGGTAC+AGG | + | chr8_1:35123743-35123762 | None:intergenic | 45.0% | |
| TCCAGGAGAATAGTTGTCTC+TGG | + | chr8_1:35123800-35123819 | None:intergenic | 45.0% | |
| GAGACAACTATTCTCCTGGA+TGG | - | chr8_1:35123800-35123819 | Msa1191180:intron | 45.0% | |
| AGAGTGTGGCACGATTATAC+AGG | + | chr8_1:35124335-35124354 | None:intergenic | 45.0% | |
| TCAAAACTGTCCTTCCCAGT+TGG | - | chr8_1:35124450-35124469 | Msa1191180:intron | 45.0% | |
| GGTTTACTTACCAACTGGGA+AGG | + | chr8_1:35124463-35124482 | None:intergenic | 45.0% | |
| ACAGAAACCAACAGACAGAC+AGG | + | chr8_1:35124503-35124522 | None:intergenic | 45.0% | |
| TGAGACACTTTGTGCATGCT+TGG | - | chr8_1:35125158-35125177 | Msa1191180:intron | 45.0% | |
| ! | AAAAGCACACGGTGCCTAAA+AGG | + | chr8_1:35125698-35125717 | None:intergenic | 45.0% |
| CAGTATGACCACTTCTTTGC+AGG | + | chr8_1:35125732-35125751 | None:intergenic | 45.0% | |
| CTGCAAAGAAGTGGTCATAC+TGG | - | chr8_1:35125730-35125749 | Msa1191180:intron | 45.0% | |
| GCAAAGAAGTGGTCATACTG+GGG | - | chr8_1:35125732-35125751 | Msa1191180:intron | 45.0% | |
| TGGTGCCTTCACTGAATTTG+TGG | - | chr8_1:35125808-35125827 | Msa1191180:CDS | 45.0% | |
| ! | TTTGGTGCAAACCAGAGGAT+TGG | + | chr8_1:35126035-35126054 | None:intergenic | 45.0% |
| !!! | AAAATTTTCAAAAAAATTTT+TGG | + | chr8_1:35125492-35125511 | None:intergenic | 5.0% |
| GGGTAATCTCCAGCTAGCTA+GGG | + | chr8_1:35120357-35120376 | None:intergenic | 50.0% | |
| TGGGTAATCTCCAGCTAGCT+AGG | + | chr8_1:35120358-35120377 | None:intergenic | 50.0% | |
| AATGGAACGTGCAAGAGCGA+TGG | + | chr8_1:35120415-35120434 | None:intergenic | 50.0% | |
| GGAAAGAAGGCGAGAGAGAA+TGG | + | chr8_1:35120433-35120452 | None:intergenic | 50.0% | |
| GTGCTCGTCATCCTTCACAA+TGG | - | chr8_1:35120550-35120569 | Msa1191180:three_prime_UTR | 50.0% | |
| CTCGTCATCCTTCACAATGG+CGG | - | chr8_1:35120553-35120572 | Msa1191180:three_prime_UTR | 50.0% | |
| TCGTCATCCTTCACAATGGC+GGG | - | chr8_1:35120554-35120573 | Msa1191180:three_prime_UTR | 50.0% | |
| CTTCGGAGAATGGTATTCCG+AGG | - | chr8_1:35120798-35120817 | Msa1191180:intron | 50.0% | |
| TCCCTGCATGTCATGCTGAT+TGG | - | chr8_1:35121821-35121840 | Msa1191180:intron | 50.0% | |
| CTATCAGCAGCATGCTATGC+TGG | - | chr8_1:35121884-35121903 | Msa1191180:intron | 50.0% | |
| GCATGCTATGCTGGATGATC+TGG | - | chr8_1:35121893-35121912 | Msa1191180:intron | 50.0% | |
| ACCCAAGCAACCTGGGTAAA+GGG | + | chr8_1:35122020-35122039 | None:intergenic | 50.0% | |
| TTTGGTCACCCAAGCAACCT+GGG | + | chr8_1:35122027-35122046 | None:intergenic | 50.0% | |
| ATTTGGTCACCCAAGCAACC+TGG | + | chr8_1:35122028-35122047 | None:intergenic | 50.0% | |
| GTTGCTTGGGTGACCAAATC+TGG | - | chr8_1:35122029-35122048 | Msa1191180:intron | 50.0% | |
| GCAATCCCACACCATTCATC+AGG | - | chr8_1:35122195-35122214 | Msa1191180:intron | 50.0% | |
| CTTCACGGAGACCAATTCAC+TGG | + | chr8_1:35122607-35122626 | None:intergenic | 50.0% | |
| GCAGGAGTCGTGAGTTTCTT+TGG | - | chr8_1:35122774-35122793 | Msa1191180:CDS | 50.0% | |
| ACGCATGCACATGAAGCAGA+GGG | + | chr8_1:35123038-35123057 | None:intergenic | 50.0% | |
| AACGCATGCACATGAAGCAG+AGG | + | chr8_1:35123039-35123058 | None:intergenic | 50.0% | |
| !! | GAGCTTGAGAAGTTTGCTGG+TGG | - | chr8_1:35123236-35123255 | Msa1191180:CDS | 50.0% |
| TCAGACACACACCTCAACAC+TGG | + | chr8_1:35123273-35123292 | None:intergenic | 50.0% | |
| AGGGAGAGAAAGCAATGGTC+TGG | - | chr8_1:35123474-35123493 | Msa1191180:intron | 50.0% | |
| CAATGGTCTGGCAGAACTCA+TGG | - | chr8_1:35123486-35123505 | Msa1191180:intron | 50.0% | |
| ! | ACAGATTGGGGTGATGGTGA+TGG | - | chr8_1:35123609-35123628 | Msa1191180:intron | 50.0% |
| GTTGTCTCTGGCATCTGACT+CGG | + | chr8_1:35123788-35123807 | None:intergenic | 50.0% | |
| GCCAGAGACAACTATTCTCC+TGG | - | chr8_1:35123796-35123815 | Msa1191180:intron | 50.0% | |
| GGCCCGATTTCAATCCTTAG+AGG | + | chr8_1:35123856-35123875 | None:intergenic | 50.0% | |
| AAGGATTGAAATCGGGCCCA+AGG | - | chr8_1:35123858-35123877 | Msa1191180:intron | 50.0% | |
| CACTATCACGACGAACAGCA+CGG | + | chr8_1:35124014-35124033 | None:intergenic | 50.0% | |
| ATCGTGCCACACTCTGATTG+AGG | - | chr8_1:35124340-35124359 | Msa1191180:CDS | 50.0% | |
| CTAAACGCCTGTCTGTCTGT+TGG | - | chr8_1:35124493-35124512 | Msa1191180:intron | 50.0% | |
| ! | GGGAGTTCTGGCTGATCAAA+GGG | + | chr8_1:35124941-35124960 | None:intergenic | 50.0% |
| CTTATACCTTCGGGGAGTTC+TGG | + | chr8_1:35124953-35124972 | None:intergenic | 50.0% | |
| GTGCATGCTTGGTATTACGG+TGG | - | chr8_1:35125169-35125188 | Msa1191180:intron | 50.0% | |
| CATGCTTGGTATTACGGTGG+AGG | - | chr8_1:35125172-35125191 | Msa1191180:intron | 50.0% | |
| GGATACAGTAGTACTCCCTC+CGG | - | chr8_1:35125248-35125267 | Msa1191180:intron | 50.0% | |
| ! | CTTGCCTGACGAAAAGCACA+CGG | + | chr8_1:35125709-35125728 | None:intergenic | 50.0% |
| !! | AAGAGCGATGGTGCCGTAAG+AGG | + | chr8_1:35120403-35120422 | None:intergenic | 55.0% |
| CGTCATCCTTCACAATGGCG+GGG | - | chr8_1:35120555-35120574 | Msa1191180:three_prime_UTR | 55.0% | |
| TGCCCTTTACCCAGGTTGCT+TGG | - | chr8_1:35122015-35122034 | Msa1191180:intron | 55.0% | |
| GCCCTTTACCCAGGTTGCTT+GGG | - | chr8_1:35122016-35122035 | Msa1191180:intron | 55.0% | |
| CACCCAAGCAACCTGGGTAA+AGG | + | chr8_1:35122021-35122040 | None:intergenic | 55.0% | |
| CGCATGCACATGAAGCAGAG+GGG | + | chr8_1:35123037-35123056 | None:intergenic | 55.0% | |
| !! | GGGGTGATGGTGATGGTTCA+TGG | - | chr8_1:35123616-35123635 | Msa1191180:intron | 55.0% |
| ! | CGTGCTGTTCGTCGTGATAG+TGG | - | chr8_1:35124012-35124031 | Msa1191180:intron | 55.0% |
| ! | CTTAGCTCCTTGGTGTGACG+AGG | - | chr8_1:35124203-35124222 | Msa1191180:intron | 55.0% |
| CATACCTCCTCGTCACACCA+AGG | + | chr8_1:35124213-35124232 | None:intergenic | 55.0% | |
| GCAAGGACAAAGGGTGAGAC+AGG | - | chr8_1:35124893-35124912 | Msa1191180:intron | 55.0% | |
| ! | GGGGAGTTCTGGCTGATCAA+AGG | + | chr8_1:35124942-35124961 | None:intergenic | 55.0% |
| CAGGCAAGCCTGCAAAGAAG+TGG | - | chr8_1:35125721-35125740 | Msa1191180:intron | 55.0% | |
| ATCGGTCCCCGCCATTGTGA+AGG | + | chr8_1:35120564-35120583 | None:intergenic | 60.0% | |
| ! | AGCTCCTTGGTGTGACGAGG+AGG | - | chr8_1:35124206-35124225 | Msa1191180:intron | 60.0% |
| GATCAGCCAGAACTCCCCGA+AGG | - | chr8_1:35124944-35124963 | Msa1191180:intron | 60.0% | |
| ! | GGCACCGTGTGCTTTTCGTC+AGG | - | chr8_1:35125702-35125721 | Msa1191180:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 35120341 | 35126120 | 35120341 | ID=Msa1191180;Name=Msa1191180 |
| chr8_1 | mRNA | 35120341 | 35126120 | 35120341 | ID=Msa1191180-mRNA-1;Parent=Msa1191180;Name=Msa1191180-mRNA-1;_AED=0.14;_eAED=0.14;_QI=127|0.83|0.84|1|0.75|0.69|13|353|507 |
| chr8_1 | exon | 35120341 | 35120758 | 35120341 | ID=Msa1191180-mRNA-1:exon:11651;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35121496 | 35121589 | 35121496 | ID=Msa1191180-mRNA-1:exon:11650;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35122234 | 35122452 | 35122234 | ID=Msa1191180-mRNA-1:exon:11649;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35122612 | 35122848 | 35122612 | ID=Msa1191180-mRNA-1:exon:11648;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35122935 | 35123087 | 35122935 | ID=Msa1191180-mRNA-1:exon:11647;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35123181 | 35123303 | 35123181 | ID=Msa1191180-mRNA-1:exon:11646;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35123617 | 35123683 | 35123617 | ID=Msa1191180-mRNA-1:exon:11645;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35124272 | 35124432 | 35124272 | ID=Msa1191180-mRNA-1:exon:11644;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35124708 | 35124824 | 35124708 | ID=Msa1191180-mRNA-1:exon:11643;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35125409 | 35125501 | 35125409 | ID=Msa1191180-mRNA-1:exon:11642;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35125642 | 35125730 | 35125642 | ID=Msa1191180-mRNA-1:exon:11641;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35125808 | 35125917 | 35125808 | ID=Msa1191180-mRNA-1:exon:11640;Parent=Msa1191180-mRNA-1 |
| chr8_1 | exon | 35125998 | 35126120 | 35125998 | ID=Msa1191180-mRNA-1:exon:11639;Parent=Msa1191180-mRNA-1 |
| chr8_1 | five_prime_UTR | 35125998 | 35126120 | 35125998 | ID=Msa1191180-mRNA-1:five_prime_utr;Parent=Msa1191180-mRNA-1 |
| chr8_1 | five_prime_UTR | 35125914 | 35125917 | 35125914 | ID=Msa1191180-mRNA-1:five_prime_utr;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35125808 | 35125913 | 35125808 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35125642 | 35125730 | 35125642 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35125409 | 35125501 | 35125409 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35124708 | 35124824 | 35124708 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35124272 | 35124432 | 35124272 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35123617 | 35123683 | 35123617 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35123181 | 35123303 | 35123181 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35122935 | 35123087 | 35122935 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35122612 | 35122848 | 35122612 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35122234 | 35122452 | 35122234 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35121496 | 35121589 | 35121496 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | CDS | 35120694 | 35120758 | 35120694 | ID=Msa1191180-mRNA-1:cds;Parent=Msa1191180-mRNA-1 |
| chr8_1 | three_prime_UTR | 35120341 | 35120693 | 35120341 | ID=Msa1191180-mRNA-1:three_prime_utr;Parent=Msa1191180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
