Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277850 | XP_003594344.1 | 92.771 | 249 | 17 | 1 | 9 | 256 | 1 | 249 | 4.63e-165 | 466 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277850 | sp|P0C8L4|Y4648_ARATH | 48.529 | 204 | 101 | 3 | 46 | 246 | 4 | 206 | 6.74e-58 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277850 | A2Q5H3 | 92.771 | 249 | 17 | 1 | 9 | 256 | 1 | 249 | 2.21e-165 | 466 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0277850 | 0.805173 | 1.517094e-49 | -8.615850e-47 |
| Msa0030170 | Msa0277850 | 0.824347 | 8.477940e-54 | -8.615850e-47 |
| Msa0063890 | Msa0277850 | 0.818776 | 1.642932e-52 | -8.615850e-47 |
| Msa0101440 | Msa0277850 | 0.820430 | 6.887218e-53 | -8.615850e-47 |
| Msa0125660 | Msa0277850 | 0.808792 | 2.601627e-50 | -8.615850e-47 |
| Msa0173890 | Msa0277850 | 0.800083 | 1.702094e-48 | -8.615850e-47 |
| Msa0195630 | Msa0277850 | 0.809975 | 1.450873e-50 | -8.615850e-47 |
| Msa0197690 | Msa0277850 | 0.834886 | 2.312154e-56 | -8.615850e-47 |
| Msa0204960 | Msa0277850 | 0.804043 | 2.611018e-49 | -8.615850e-47 |
| Msa0211150 | Msa0277850 | 0.824800 | 6.633597e-54 | -8.615850e-47 |
| Msa0214550 | Msa0277850 | 0.826772 | 2.257775e-54 | -8.615850e-47 |
| Msa0237410 | Msa0277850 | 0.800139 | 1.657691e-48 | -8.615850e-47 |
| Msa0237420 | Msa0277850 | 0.815495 | 8.977672e-52 | -8.615850e-47 |
| Msa0239770 | Msa0277850 | 0.808562 | 2.914048e-50 | -8.615850e-47 |
| Msa0249860 | Msa0277850 | 0.816724 | 4.772465e-52 | -8.615850e-47 |
| Msa0257490 | Msa0277850 | 0.800086 | 1.699274e-48 | -8.615850e-47 |
| Msa0267920 | Msa0277850 | 0.809815 | 1.570084e-50 | -8.615850e-47 |
| Msa0277850 | Msa0278570 | 0.805863 | 1.086882e-49 | -8.615850e-47 |
| Msa0277850 | Msa0281530 | 0.812657 | 3.797722e-51 | -8.615850e-47 |
| Msa0277850 | Msa0292400 | 0.807738 | 4.364468e-50 | -8.615850e-47 |
| Msa0277850 | Msa0317480 | 0.931103 | 6.188296e-94 | -8.615850e-47 |
| Msa0277850 | Msa0320590 | 0.807684 | 4.482561e-50 | -8.615850e-47 |
| Msa0277850 | Msa0323270 | 0.804016 | 2.644307e-49 | -8.615850e-47 |
| Msa0277850 | Msa0343850 | 0.801770 | 7.695868e-49 | -8.615850e-47 |
| Msa0277850 | Msa0357990 | 0.806831 | 6.793921e-50 | -8.615850e-47 |
| Msa0277850 | Msa0365100 | 0.808350 | 3.234432e-50 | -8.615850e-47 |
| Msa0277850 | Msa0376350 | 0.801307 | 9.576208e-49 | -8.615850e-47 |
| Msa0277850 | Msa0376630 | 0.819580 | 1.078039e-52 | -8.615850e-47 |
| Msa0277850 | Msa0378720 | 0.811927 | 5.480840e-51 | -8.615850e-47 |
| Msa0277850 | Msa0386850 | 0.801245 | 9.861503e-49 | -8.615850e-47 |
| Msa0277850 | Msa0424790 | 0.806171 | 9.365424e-50 | -8.615850e-47 |
| Msa0277850 | Msa0440750 | 0.804824 | 1.794680e-49 | -8.615850e-47 |
| Msa0277850 | Msa0467490 | 0.805363 | 1.383754e-49 | -8.615850e-47 |
| Msa0277850 | Msa0479170 | 0.835223 | 1.901694e-56 | -8.615850e-47 |
| Msa0277850 | Msa0479200 | 0.815863 | 7.433503e-52 | -8.615850e-47 |
| Msa0277850 | Msa0485240 | 0.805318 | 1.414719e-49 | -8.615850e-47 |
| Msa0277850 | Msa0626450 | 0.813856 | 2.070929e-51 | -8.615850e-47 |
| Msa0277850 | Msa0626490 | 0.817177 | 3.774824e-52 | -8.615850e-47 |
| Msa0277850 | Msa0643560 | 0.805286 | 1.436698e-49 | -8.615850e-47 |
| Msa0277850 | Msa0651550 | 0.803037 | 4.221018e-49 | -8.615850e-47 |
| Msa0277850 | Msa0661790 | 0.807702 | 4.441726e-50 | -8.615850e-47 |
| Msa0277850 | Msa0664600 | 0.811743 | 6.009202e-51 | -8.615850e-47 |
| Msa0277850 | Msa0688390 | 0.819684 | 1.020382e-52 | -8.615850e-47 |
| Msa0277850 | Msa0692980 | 0.814272 | 1.676602e-51 | -8.615850e-47 |
| Msa0277850 | Msa0707250 | 0.806491 | 8.014926e-50 | -8.615850e-47 |
| Msa0277850 | Msa0725050 | 0.811892 | 5.577688e-51 | -8.615850e-47 |
| Msa0277850 | Msa0729720 | 0.800770 | 1.232974e-48 | -8.615850e-47 |
| Msa0277850 | Msa0770720 | 0.801278 | 9.708729e-49 | -8.615850e-47 |
| Msa0277850 | Msa0876190 | 0.825146 | 5.496286e-54 | -8.615850e-47 |
| Msa0277850 | Msa0943440 | 0.851269 | 9.907692e-61 | -8.615850e-47 |
| Msa0277850 | Msa0945110 | 0.809295 | 2.030503e-50 | -8.615850e-47 |
| Msa0277850 | Msa0967870 | 0.807175 | 5.747588e-50 | -8.615850e-47 |
| Msa0277850 | Msa0980140 | 0.853930 | 1.725250e-61 | -8.615850e-47 |
| Msa0277850 | Msa1020670 | 0.817530 | 3.144714e-52 | -8.615850e-47 |
| Msa0277850 | Msa1079230 | 0.802479 | 5.502584e-49 | -8.615850e-47 |
| Msa0277850 | Msa1096970 | 0.800183 | 1.624362e-48 | -8.615850e-47 |
| Msa0277850 | Msa1101090 | 0.805990 | 1.021977e-49 | -8.615850e-47 |
| Msa0277850 | Msa1124110 | 0.809769 | 1.606749e-50 | -8.615850e-47 |
| Msa0277850 | Msa1140210 | 0.818515 | 1.882828e-52 | -8.615850e-47 |
| Msa0277850 | Msa1168950 | 0.813361 | 2.661819e-51 | -8.615850e-47 |
| Msa0277850 | Msa1169040 | 0.807076 | 6.030895e-50 | -8.615850e-47 |
| Msa0277850 | Msa1191180 | 0.813989 | 1.936033e-51 | -8.615850e-47 |
| Msa0277850 | Msa1211420 | -0.803563 | 3.284729e-49 | -8.615850e-47 |
| Msa0277850 | Msa1244500 | 0.807661 | 4.533593e-50 | -8.615850e-47 |
| Msa0277850 | Msa1271130 | 0.801445 | 8.975690e-49 | -8.615850e-47 |
| Msa0277850 | Msa1297230 | 0.815394 | 9.457377e-52 | -8.615850e-47 |
| Msa0277850 | Msa1306560 | 0.804084 | 2.559543e-49 | -8.615850e-47 |
| Msa0277850 | Msa1345100 | 0.841631 | 4.227334e-58 | -8.615850e-47 |
| Msa0277850 | Msa1360440 | 0.801011 | 1.100920e-48 | -8.615850e-47 |
| Msa0277850 | Msa1375380 | 0.824380 | 8.328890e-54 | -8.615850e-47 |
| Msa0277850 | Msa1375560 | 0.802021 | 6.834776e-49 | -8.615850e-47 |
| Msa0277850 | Msa1385890 | 0.807106 | 5.942970e-50 | -8.615850e-47 |
| Msa0277850 | Msa1393570 | 0.806721 | 7.168333e-50 | -8.615850e-47 |
| Msa0277850 | Msa1418090 | 0.810090 | 1.370269e-50 | -8.615850e-47 |
| Msa0277850 | Msa1418240 | 0.814121 | 1.810568e-51 | -8.615850e-47 |
| Msa0277850 | Msa1419370 | 0.812124 | 4.965158e-51 | -8.615850e-47 |
| Msa0277850 | Msa1419690 | 0.820820 | 5.605578e-53 | -8.615850e-47 |
| Msa0277850 | Msa1422580 | 0.812160 | 4.874882e-51 | -8.615850e-47 |
| Msa0277850 | Msa1464810 | 0.839774 | 1.296078e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277850 | MtrunA17_Chr2g0290801 | 92.771 | 249 | 17 | 1 | 9 | 256 | 1 | 249 | 4.26e-169 | 466 |
| Msa0277850 | MtrunA17_Chr5g0444781 | 51.759 | 199 | 95 | 1 | 48 | 246 | 8 | 205 | 7.77e-70 | 217 |
| Msa0277850 | MtrunA17_Chr5g0444781 | 64.706 | 51 | 18 | 0 | 48 | 98 | 257 | 307 | 1.55e-13 | 69.3 |
| Msa0277850 | MtrunA17_Chr6g0483551 | 48.500 | 200 | 101 | 2 | 48 | 246 | 4 | 202 | 1.50e-61 | 192 |
| Msa0277850 | MtrunA17_Chr6g0483591 | 49.231 | 195 | 98 | 1 | 52 | 246 | 8 | 201 | 3.19e-61 | 192 |
| Msa0277850 | MtrunA17_Chr6g0483571 | 47.980 | 198 | 101 | 2 | 52 | 248 | 8 | 204 | 4.19e-60 | 189 |
| Msa0277850 | MtrunA17_Chr3g0103011 | 41.290 | 155 | 90 | 1 | 92 | 246 | 16 | 169 | 6.20e-34 | 126 |
| Msa0277850 | MtrunA17_Chr5g0444791 | 40.252 | 159 | 83 | 4 | 92 | 246 | 10 | 160 | 6.06e-29 | 109 |
| Msa0277850 | MtrunA17_Chr3g0103001 | 67.442 | 43 | 14 | 0 | 48 | 90 | 35 | 77 | 4.25e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277850 | AT4G26485.1 | 48.529 | 204 | 101 | 3 | 46 | 246 | 4 | 206 | 6.85e-59 | 186 |
| Msa0277850 | AT5G56075.1 | 47.196 | 214 | 94 | 3 | 39 | 249 | 56 | 253 | 1.77e-56 | 181 |
| Msa0277850 | AT1G55790.1 | 43.662 | 213 | 119 | 1 | 36 | 248 | 7 | 218 | 1.22e-54 | 181 |
| Msa0277850 | AT5G25030.1 | 43.367 | 196 | 97 | 2 | 52 | 247 | 11 | 192 | 4.75e-48 | 158 |
| Msa0277850 | AT1G55803.1 | 49.593 | 123 | 62 | 0 | 36 | 158 | 5 | 127 | 1.50e-35 | 124 |
| Msa0277850 | AT5G56060.1 | 37.333 | 150 | 91 | 2 | 88 | 236 | 2 | 149 | 1.41e-30 | 112 |
| Msa0277850 | AT2G11045.1 | 33.121 | 157 | 69 | 4 | 92 | 247 | 14 | 135 | 1.76e-16 | 74.3 |
| Msa0277850 | AT1G55800.1 | 39.773 | 88 | 52 | 1 | 161 | 248 | 10 | 96 | 5.10e-14 | 70.1 |
Find 71 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTTAGATCTTCACTTTA+TGG | 0.097788 | 2_3:-10675750 | Msa0277850:three_prime_UTR |
| TAAATTATTGATTGGTCATT+AGG | 0.198853 | 2_3:-10678276 | Msa0277850:five_prime_UTR |
| CTTTGTTTAGCTAGGGCTTT+TGG | 0.226805 | 2_3:-10678009 | Msa0277850:CDS |
| AAAGTTGTTGAAGGGGTTTA+TGG | 0.239937 | 2_3:-10676095 | Msa0277850:CDS |
| AAGATAGGCTATAATTTGTT+AGG | 0.280357 | 2_3:+10675821 | None:intergenic |
| AAATTATTGATTGGTCATTA+GGG | 0.285780 | 2_3:-10678275 | Msa0277850:five_prime_UTR |
| TACTTAAACATTGTTGATAA+GGG | 0.295882 | 2_3:-10675650 | Msa0277850:three_prime_UTR |
| AAACACAAAATTCTCTTTGT+TGG | 0.296100 | 2_3:-10678054 | Msa0277850:CDS |
| ATTCAATCATGCATAGATTA+TGG | 0.315340 | 2_3:+10678232 | None:intergenic |
| AGCCACTTCCCTTGATTCTC+AGG | 0.330415 | 2_3:-10677968 | Msa0277850:CDS |
| CTTTCTCTCTTTGTTTAGCT+AGG | 0.331146 | 2_3:-10678017 | Msa0277850:CDS |
| AAGTTGAAAACTTTAGTATA+TGG | 0.341306 | 2_3:+10678310 | None:intergenic |
| CAGATTTATCTTTCCCTGTT+GGG | 0.342684 | 2_3:-10675883 | Msa0277850:CDS |
| AAAGGAAACATTACTGAATC+TGG | 0.348551 | 2_3:+10677670 | None:intergenic |
| ACAAGATCCCATTTGTTGTA+TGG | 0.352391 | 2_3:+10676007 | None:intergenic |
| CTACTTAAACATTGTTGATA+AGG | 0.352461 | 2_3:-10675651 | Msa0277850:three_prime_UTR |
| CATCATCGAACACAGCAAAA+TGG | 0.353869 | 2_3:-10678095 | Msa0277850:CDS |
| AATCAAGGGAAGTGGCTATA+AGG | 0.366752 | 2_3:+10677974 | None:intergenic |
| TTCTTTCATAAATTATTGAT+TGG | 0.373284 | 2_3:-10678284 | Msa0277850:five_prime_UTR |
| TAAGTACTGGCTTCCCCAAC+AGG | 0.374095 | 2_3:+10675869 | None:intergenic |
| ATTTGTTAGGGAGAGGTGTT+TGG | 0.378150 | 2_3:+10675834 | None:intergenic |
| AGGGTGATCCATACAACAAA+TGG | 0.390906 | 2_3:-10676015 | Msa0277850:CDS |
| TCTTTATGATGTTGATGTTA+AGG | 0.404489 | 2_3:-10677790 | Msa0277850:CDS |
| CAAAATTCTCTTTGTTGGAG+AGG | 0.419240 | 2_3:-10678049 | Msa0277850:CDS |
| ATCATCATTGCAGATGAATA+TGG | 0.425955 | 2_3:+10675537 | None:intergenic |
| TCAGATTTATCTTTCCCTGT+TGG | 0.434452 | 2_3:-10675884 | Msa0277850:CDS |
| ATCTGGCAGTAACTATTCTC+AGG | 0.435024 | 2_3:+10677687 | None:intergenic |
| TTTCTCTCTTTGTTTAGCTA+GGG | 0.444044 | 2_3:-10678016 | Msa0277850:CDS |
| TTGCATTACCCTGAGAATCA+AGG | 0.455310 | 2_3:+10677959 | None:intergenic |
| GAGCTTGAACTTGTAAGTAC+TGG | 0.474156 | 2_3:+10675856 | None:intergenic |
| GGCTATAATTTGTTAGGGAG+AGG | 0.484720 | 2_3:+10675827 | None:intergenic |
| CATTTCCAGAGTTTAGACTT+TGG | 0.490874 | 2_3:+10675561 | None:intergenic |
| GGATAGTCATCTTTGAAGAA+TGG | 0.508198 | 2_3:+10675941 | None:intergenic |
| TATGACAACAAGAGAGCTCA+TGG | 0.509129 | 2_3:-10675914 | Msa0277850:CDS |
| AGATAGGCTATAATTTGTTA+GGG | 0.513605 | 2_3:+10675822 | None:intergenic |
| TTCTTCAAAGATGACTATCC+TGG | 0.517775 | 2_3:-10675938 | Msa0277850:CDS |
| AAAGAAGTGGGACTAGAAGT+TGG | 0.519198 | 2_3:+10675796 | None:intergenic |
| AAAATTCTCTTTGTTGGAGA+GGG | 0.521483 | 2_3:-10678048 | Msa0277850:CDS |
| AGATTTATCTTTCCCTGTTG+GGG | 0.524030 | 2_3:-10675882 | Msa0277850:CDS |
| ACTAGTAAAGAAAGAGGGAG+GGG | 0.524780 | 2_3:-10676059 | Msa0277850:CDS |
| AGTAACTATTCTCAGGGTAA+AGG | 0.525453 | 2_3:+10677694 | None:intergenic |
| ATTGAAAAGAAGTATAGTAA+TGG | 0.531936 | 2_3:-10677855 | Msa0277850:CDS |
| AAAGGCACTAGTAAAGAAAG+AGG | 0.540011 | 2_3:-10676065 | Msa0277850:CDS |
| TGCATTACCCTGAGAATCAA+GGG | 0.540315 | 2_3:+10677960 | None:intergenic |
| GGGTGATCCATACAACAAAT+GGG | 0.540448 | 2_3:-10676014 | Msa0277850:CDS |
| GCCACTTCCCTTGATTCTCA+GGG | 0.542014 | 2_3:-10677967 | Msa0277850:intron |
| GTAGTCCAAAGTCTAAACTC+TGG | 0.555755 | 2_3:-10675566 | Msa0277850:three_prime_UTR |
| GCAAGGGAACTTGAAGAAAG+AGG | 0.562096 | 2_3:-10677822 | Msa0277850:CDS |
| ACTTAAACATTGTTGATAAG+GGG | 0.562256 | 2_3:-10675649 | Msa0277850:three_prime_UTR |
| ACCCTGAGAATCAAGGGAAG+TGG | 0.567810 | 2_3:+10677966 | None:intergenic |
| ATAAGCCAAAATAAAAGAAG+TGG | 0.568651 | 2_3:+10675783 | None:intergenic |
| CTTTGAAGAATGGAACAGCT+TGG | 0.571652 | 2_3:+10675951 | None:intergenic |
| GTAATGGAATGAGTAATGCA+AGG | 0.572801 | 2_3:-10677839 | Msa0277850:CDS |
| GACTAGAAGTTGGCAAAGAT+AGG | 0.577531 | 2_3:+10675806 | None:intergenic |
| TATTGATTGGTCATTAGGGT+CGG | 0.580575 | 2_3:-10678271 | Msa0277850:five_prime_UTR |
| CACTAGTAAAGAAAGAGGGA+GGG | 0.592759 | 2_3:-10676060 | Msa0277850:CDS |
| GGGGTTTATGGCAAATGCAA+AGG | 0.596492 | 2_3:-10676083 | Msa0277850:CDS |
| AAGGGGTTTGTAATGAATGA+TGG | 0.597722 | 2_3:-10675632 | Msa0277850:three_prime_UTR |
| GCTCTCTTGTTGTCATAACC+AGG | 0.598483 | 2_3:+10675920 | None:intergenic |
| ATTTCTTTCTCAAGACTCAG+AGG | 0.603232 | 2_3:-10677755 | Msa0277850:CDS |
| TAAGCCAAAATAAAAGAAGT+GGG | 0.605418 | 2_3:+10675784 | None:intergenic |
| ATTAAAGGTTGAGCTGTGCA+TGG | 0.616274 | 2_3:+10675485 | None:intergenic |
| TAATGGAATGAGTAATGCAA+GGG | 0.623573 | 2_3:-10677838 | Msa0277850:CDS |
| GCACTAGTAAAGAAAGAGGG+AGG | 0.626548 | 2_3:-10676061 | Msa0277850:CDS |
| GATTCATGTAACTCACAAAG+AGG | 0.650804 | 2_3:-10676035 | Msa0277850:CDS |
| GGGTAAAGGAATCCAACATG+AGG | 0.659464 | 2_3:+10677708 | None:intergenic |
| TCTGGCAGTAACTATTCTCA+GGG | 0.659879 | 2_3:+10677688 | None:intergenic |
| AAGGCACTAGTAAAGAAAGA+GGG | 0.660972 | 2_3:-10676064 | Msa0277850:CDS |
| ATTCATGTAACTCACAAAGA+GGG | 0.661176 | 2_3:-10676034 | Msa0277850:CDS |
| AAGTACTGGCTTCCCCAACA+GGG | 0.678090 | 2_3:+10675870 | None:intergenic |
| TCAGTGACAGTGTTAAGTTG+AGG | 0.766236 | 2_3:+10678165 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAACAAAAATGAAAAA+TGG | + | chr2_3:10675991-10676010 | None:intergenic | 10.0% |
| !!! | ATAATAACATCTTAAAATTT+TGG | + | chr2_3:10676382-10676401 | None:intergenic | 10.0% |
| !! | TTCTTTCATAAATTATTGAT+TGG | - | chr2_3:10675608-10675627 | Msa0277850:three_prime_UTR | 15.0% |
| !! | AAAAAGTAAAAAAGAAAGAA+AGG | + | chr2_3:10676243-10676262 | None:intergenic | 15.0% |
| !!! | AAGATAATAACATTTTATCT+AGG | + | chr2_3:10677051-10677070 | None:intergenic | 15.0% |
| !! | TAGATAAAATGTTATTATCT+TGG | - | chr2_3:10677050-10677069 | Msa0277850:intron | 15.0% |
| !! | AAGTTGAAAACTTTAGTATA+TGG | + | chr2_3:10675585-10675604 | None:intergenic | 20.0% |
| !!! | TAAATTATTGATTGGTCATT+AGG | - | chr2_3:10675616-10675635 | Msa0277850:three_prime_UTR | 20.0% |
| !!! | AAATTATTGATTGGTCATTA+GGG | - | chr2_3:10675617-10675636 | Msa0277850:three_prime_UTR | 20.0% |
| !!! | ATTGAAAAGAAGTATAGTAA+TGG | - | chr2_3:10676037-10676056 | Msa0277850:CDS | 20.0% |
| !!! | TAACATCTTAAAATTTTGGT+TGG | + | chr2_3:10676378-10676397 | None:intergenic | 20.0% |
| !! | TTAACATCTCAATTTAATGA+TGG | - | chr2_3:10676604-10676623 | Msa0277850:intron | 20.0% |
| !! | TAACATCTCAATTTAATGAT+GGG | - | chr2_3:10676605-10676624 | Msa0277850:intron | 20.0% |
| !!! | CGGGATAATAATATATTTTA+TGG | - | chr2_3:10677292-10677311 | Msa0277850:intron | 20.0% |
| !! | AAAAAAGTAACAGCATAATT+TGG | + | chr2_3:10678197-10678216 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTTTTTCTTTCTG+TGG | - | chr2_3:10678209-10678228 | Msa0277850:CDS | 20.0% |
| !!! | TACTTAAACATTGTTGATAA+GGG | - | chr2_3:10678242-10678261 | Msa0277850:five_prime_UTR | 20.0% |
| !!! | CACTATTCAAGATATTTTTT+TGG | + | chr2_3:10678384-10678403 | None:intergenic | 20.0% |
| !! | CAAAAAAATATCTTGAATAG+TGG | - | chr2_3:10678382-10678401 | Msa0277850:five_prime_UTR | 20.0% |
| ! | ATTCAATCATGCATAGATTA+TGG | + | chr2_3:10675663-10675682 | None:intergenic | 25.0% |
| ! | AAACACAAAATTCTCTTTGT+TGG | - | chr2_3:10675838-10675857 | Msa0277850:CDS | 25.0% |
| ! | AAAAATGGACATGCTAAAAA+AGG | + | chr2_3:10675976-10675995 | None:intergenic | 25.0% |
| ! | TCTTTATGATGTTGATGTTA+AGG | - | chr2_3:10676102-10676121 | Msa0277850:CDS | 25.0% |
| !! | GTTTATAATTTTCCTCATGT+TGG | - | chr2_3:10676172-10676191 | Msa0277850:intron | 25.0% |
| ! | CTACTTACAAATGTAACTTT+AGG | + | chr2_3:10676308-10676327 | None:intergenic | 25.0% |
| ! | CTAAAGTTACATTTGTAAGT+AGG | - | chr2_3:10676306-10676325 | Msa0277850:intron | 25.0% |
| ! | CCTTAAAAAACTGGATTATA+AGG | + | chr2_3:10676344-10676363 | None:intergenic | 25.0% |
| !!! | CCTTATAATCCAGTTTTTTA+AGG | - | chr2_3:10676341-10676360 | Msa0277850:intron | 25.0% |
| ! | TTAAGTCAACCTTAAAAAAC+TGG | + | chr2_3:10676353-10676372 | None:intergenic | 25.0% |
| ! | ATAGCCTATCCAAAATTTAT+TGG | - | chr2_3:10676400-10676419 | Msa0277850:intron | 25.0% |
| ! | TAGCCTATCCAAAATTTATT+GGG | - | chr2_3:10676401-10676420 | Msa0277850:intron | 25.0% |
| !!! | TAATGATTTTTCAGCTGATT+TGG | + | chr2_3:10676583-10676602 | None:intergenic | 25.0% |
| ! | AACATCTCAATTTAATGATG+GGG | - | chr2_3:10676606-10676625 | Msa0277850:intron | 25.0% |
| !!! | TTACCCAAATTTTAAGATCA+AGG | - | chr2_3:10676754-10676773 | Msa0277850:intron | 25.0% |
| ! | CAACCTTGATCTTAAAATTT+GGG | + | chr2_3:10676760-10676779 | None:intergenic | 25.0% |
| ! | ACAACCTTGATCTTAAAATT+TGG | + | chr2_3:10676761-10676780 | None:intergenic | 25.0% |
| ! | AGGTCAAATATACTTAAATC+AGG | + | chr2_3:10676931-10676950 | None:intergenic | 25.0% |
| !!! | ATAAACCAGGGTTTTAAAAA+AGG | + | chr2_3:10677022-10677041 | None:intergenic | 25.0% |
| !! | TCTAGGATATATATAAACCA+GGG | + | chr2_3:10677034-10677053 | None:intergenic | 25.0% |
| !! | ATCTAGGATATATATAAACC+AGG | + | chr2_3:10677035-10677054 | None:intergenic | 25.0% |
| ! | AAATGTTATTATCTTGGACT+TGG | - | chr2_3:10677056-10677075 | Msa0277850:intron | 25.0% |
| ! | AATAGTCAGAATTTACATTG+GGG | + | chr2_3:10677123-10677142 | None:intergenic | 25.0% |
| ! | CAATAGTCAGAATTTACATT+GGG | + | chr2_3:10677124-10677143 | None:intergenic | 25.0% |
| ! | TCAATAGTCAGAATTTACAT+TGG | + | chr2_3:10677125-10677144 | None:intergenic | 25.0% |
| ! | TTTCTATTGCTACACTAATT+TGG | + | chr2_3:10677170-10677189 | None:intergenic | 25.0% |
| ! | TGTAGCAATAGAAATTAAGT+AGG | - | chr2_3:10677176-10677195 | Msa0277850:intron | 25.0% |
| ! | TTCCTAATAGAATTTAAGGA+TGG | - | chr2_3:10677241-10677260 | Msa0277850:intron | 25.0% |
| ! | TTCCATCCTTAAATTCTATT+AGG | + | chr2_3:10677246-10677265 | None:intergenic | 25.0% |
| ! | ATTTAAGGATGGAAATAGTA+AGG | - | chr2_3:10677252-10677271 | Msa0277850:intron | 25.0% |
| !! | AGGTTTGACTAAATTTTACT+CGG | - | chr2_3:10677272-10677291 | Msa0277850:intron | 25.0% |
| ! | GTATGAAGAAACAAAAATAG+AGG | + | chr2_3:10677336-10677355 | None:intergenic | 25.0% |
| ! | TTGAACAAAAAGTTGTTGAA+GGG | - | chr2_3:10677789-10677808 | Msa0277850:CDS | 25.0% |
| !!! | AGATAGGCTATAATTTGTTA+GGG | + | chr2_3:10678073-10678092 | None:intergenic | 25.0% |
| !!! | AAGATAGGCTATAATTTGTT+AGG | + | chr2_3:10678074-10678093 | None:intergenic | 25.0% |
| ! | TAAGCCAAAATAAAAGAAGT+GGG | + | chr2_3:10678111-10678130 | None:intergenic | 25.0% |
| ! | ATAAGCCAAAATAAAAGAAG+TGG | + | chr2_3:10678112-10678131 | None:intergenic | 25.0% |
| ! | ATGTTTAGATCTTCACTTTA+TGG | - | chr2_3:10678142-10678161 | Msa0277850:CDS | 25.0% |
| ! | CTACTTAAACATTGTTGATA+AGG | - | chr2_3:10678241-10678260 | Msa0277850:exon | 25.0% |
| !! | ACTTAAACATTGTTGATAAG+GGG | - | chr2_3:10678243-10678262 | Msa0277850:five_prime_UTR | 25.0% |
| !!! | TGATCATGTTGTTTTTGTGT+TGG | + | chr2_3:10675706-10675725 | None:intergenic | 30.0% |
| AAAATTCTCTTTGTTGGAGA+GGG | - | chr2_3:10675844-10675863 | Msa0277850:CDS | 30.0% | |
| ! | TTTCTCTCTTTGTTTAGCTA+GGG | - | chr2_3:10675876-10675895 | Msa0277850:CDS | 30.0% |
| TAATGGAATGAGTAATGCAA+GGG | - | chr2_3:10676054-10676073 | Msa0277850:CDS | 30.0% | |
| AAAGGAAACATTACTGAATC+TGG | + | chr2_3:10676225-10676244 | None:intergenic | 30.0% | |
| ! | TTGCCCAATAAATTTTGGAT+AGG | + | chr2_3:10676407-10676426 | None:intergenic | 30.0% |
| ! | TTGACGTCTCAATTTAACTT+GGG | + | chr2_3:10676519-10676538 | None:intergenic | 30.0% |
| ATTGACGTCTCAATTTAACT+TGG | + | chr2_3:10676520-10676539 | None:intergenic | 30.0% | |
| ! | CTCTCAATAAATAGCCATTT+TGG | + | chr2_3:10676723-10676742 | None:intergenic | 30.0% |
| AAATGTATATGACCACAACT+TGG | + | chr2_3:10676899-10676918 | None:intergenic | 30.0% | |
| AGTATATTTGACCTTAATCG+TGG | - | chr2_3:10676937-10676956 | Msa0277850:intron | 30.0% | |
| TCTGTCTATGTTTAACATCA+AGG | + | chr2_3:10676986-10677005 | None:intergenic | 30.0% | |
| GTAGTTGAATGACTCAAAAA+TGG | + | chr2_3:10677091-10677110 | None:intergenic | 30.0% | |
| !! | ACACTAATTTGGCTTGATTT+AGG | + | chr2_3:10677159-10677178 | None:intergenic | 30.0% |
| GCAATAGAAATTAAGTAGGT+AGG | - | chr2_3:10677180-10677199 | Msa0277850:intron | 30.0% | |
| GTGCTTCCTAATAGAATTTA+AGG | - | chr2_3:10677237-10677256 | Msa0277850:intron | 30.0% | |
| ! | GGTTTGACTAAATTTTACTC+GGG | - | chr2_3:10677273-10677292 | Msa0277850:intron | 30.0% |
| CAAATATTGTCAACTAGTAG+CGG | + | chr2_3:10677586-10677605 | None:intergenic | 30.0% | |
| GGTACATAAATACTGTATAG+CGG | - | chr2_3:10677605-10677624 | Msa0277850:intron | 30.0% | |
| TGTCTCAAGAATAGTTTGAA+AGG | + | chr2_3:10677725-10677744 | None:intergenic | 30.0% | |
| GTTGAACAAAAAGTTGTTGA+AGG | - | chr2_3:10677788-10677807 | Msa0277850:CDS | 30.0% | |
| TGAACAAAAAGTTGTTGAAG+GGG | - | chr2_3:10677790-10677809 | Msa0277850:CDS | 30.0% | |
| ATTCATGTAACTCACAAAGA+GGG | - | chr2_3:10677858-10677877 | Msa0277850:CDS | 30.0% | |
| GTAAGAAAAGCAGAAAAAAG+AGG | - | chr2_3:10677906-10677925 | Msa0277850:intron | 30.0% | |
| !! | TAGTCCCACTTCTTTTATTT+TGG | - | chr2_3:10678104-10678123 | Msa0277850:CDS | 30.0% |
| ATCATCATTGCAGATGAATA+TGG | + | chr2_3:10678358-10678377 | None:intergenic | 30.0% | |
| ! | TATTGATTGGTCATTAGGGT+CGG | - | chr2_3:10675621-10675640 | Msa0277850:three_prime_UTR | 35.0% |
| CAAAATTCTCTTTGTTGGAG+AGG | - | chr2_3:10675843-10675862 | Msa0277850:CDS | 35.0% | |
| ! | CTTTCTCTCTTTGTTTAGCT+AGG | - | chr2_3:10675875-10675894 | Msa0277850:CDS | 35.0% |
| ! | GTAATGGAATGAGTAATGCA+AGG | - | chr2_3:10676053-10676072 | Msa0277850:CDS | 35.0% |
| ATTTCTTTCTCAAGACTCAG+AGG | - | chr2_3:10676137-10676156 | Msa0277850:intron | 35.0% | |
| AGTAACTATTCTCAGGGTAA+AGG | + | chr2_3:10676201-10676220 | None:intergenic | 35.0% | |
| ! | GCTCTTTGCCCAATAAATTT+TGG | + | chr2_3:10676412-10676431 | None:intergenic | 35.0% |
| ! | TATTGGGCAAAGAGCAATTT+TGG | - | chr2_3:10676417-10676436 | Msa0277850:intron | 35.0% |
| TTATGACTACTATGACATCG+AGG | + | chr2_3:10676457-10676476 | None:intergenic | 35.0% | |
| ATGGGGAATACTATGACTAA+CGG | - | chr2_3:10676623-10676642 | Msa0277850:intron | 35.0% | |
| ! | TGATAGTGAGGTAAACATAC+AGG | - | chr2_3:10676695-10676714 | Msa0277850:intron | 35.0% |
| GATAGTGAGGTAAACATACA+GGG | - | chr2_3:10676696-10676715 | Msa0277850:intron | 35.0% | |
| TAAACATACAGGGACCAAAA+TGG | - | chr2_3:10676706-10676725 | Msa0277850:intron | 35.0% | |
| CATCAAAAACCTTGATGTCA+TGG | - | chr2_3:10676872-10676891 | Msa0277850:intron | 35.0% | |
| TGGCTTGATTTAGGAAATAG+AGG | + | chr2_3:10677150-10677169 | None:intergenic | 35.0% | |
| TCGTGGTTTCCTTTCAATAA+GGG | - | chr2_3:10677382-10677401 | Msa0277850:intron | 35.0% | |
| AAAGTTGCACAACAACTTCA+TGG | + | chr2_3:10677432-10677451 | None:intergenic | 35.0% | |
| TCCATCAATGTCGTTAATTG+TGG | - | chr2_3:10677493-10677512 | Msa0277850:intron | 35.0% | |
| CCATCAATGTCGTTAATTGT+GGG | - | chr2_3:10677494-10677513 | Msa0277850:intron | 35.0% | |
| CGCTACTAGTTGACAATATT+TGG | - | chr2_3:10677584-10677603 | Msa0277850:intron | 35.0% | |
| CTGATCCATGTATTCTTGTT+TGG | - | chr2_3:10677659-10677678 | Msa0277850:intron | 35.0% | |
| ATGCACCAAACAAGAATACA+TGG | + | chr2_3:10677667-10677686 | None:intergenic | 35.0% | |
| !! | TATTCTTGTTTGGTGCATTG+TGG | - | chr2_3:10677669-10677688 | Msa0277850:intron | 35.0% |
| ACTATTCTTGAGACAGTGTA+TGG | - | chr2_3:10677730-10677749 | Msa0277850:CDS | 35.0% | |
| ! | AACTTTTTGTTCAACCTGCT+TGG | + | chr2_3:10677783-10677802 | None:intergenic | 35.0% |
| AAAGTTGTTGAAGGGGTTTA+TGG | - | chr2_3:10677797-10677816 | Msa0277850:CDS | 35.0% | |
| !! | AAAGGCACTAGTAAAGAAAG+AGG | - | chr2_3:10677827-10677846 | Msa0277850:CDS | 35.0% |
| ! | AAGGCACTAGTAAAGAAAGA+GGG | - | chr2_3:10677828-10677847 | Msa0277850:CDS | 35.0% |
| GATTCATGTAACTCACAAAG+AGG | - | chr2_3:10677857-10677876 | Msa0277850:CDS | 35.0% | |
| !! | ACAAGATCCCATTTGTTGTA+TGG | + | chr2_3:10677888-10677907 | None:intergenic | 35.0% |
| ! | GGATAGTCATCTTTGAAGAA+TGG | + | chr2_3:10677954-10677973 | None:intergenic | 35.0% |
| TTCTTCAAAGATGACTATCC+TGG | - | chr2_3:10677954-10677973 | Msa0277850:intron | 35.0% | |
| TCAGATTTATCTTTCCCTGT+TGG | - | chr2_3:10678008-10678027 | Msa0277850:CDS | 35.0% | |
| CAGATTTATCTTTCCCTGTT+GGG | - | chr2_3:10678009-10678028 | Msa0277850:CDS | 35.0% | |
| AGATTTATCTTTCCCTGTTG+GGG | - | chr2_3:10678010-10678029 | Msa0277850:CDS | 35.0% | |
| AAGGGGTTTGTAATGAATGA+TGG | - | chr2_3:10678260-10678279 | Msa0277850:five_prime_UTR | 35.0% | |
| CATTTCCAGAGTTTAGACTT+TGG | + | chr2_3:10678334-10678353 | None:intergenic | 35.0% | |
| ! | TCAGTGACAGTGTTAAGTTG+AGG | + | chr2_3:10675730-10675749 | None:intergenic | 40.0% |
| CATCATCGAACACAGCAAAA+TGG | - | chr2_3:10675797-10675816 | Msa0277850:three_prime_UTR | 40.0% | |
| !! | CTTTGTTTAGCTAGGGCTTT+TGG | - | chr2_3:10675883-10675902 | Msa0277850:CDS | 40.0% |
| AATCAAGGGAAGTGGCTATA+AGG | + | chr2_3:10675921-10675940 | None:intergenic | 40.0% | |
| TGCATTACCCTGAGAATCAA+GGG | + | chr2_3:10675935-10675954 | None:intergenic | 40.0% | |
| TTGCATTACCCTGAGAATCA+AGG | + | chr2_3:10675936-10675955 | None:intergenic | 40.0% | |
| TCTGGCAGTAACTATTCTCA+GGG | + | chr2_3:10676207-10676226 | None:intergenic | 40.0% | |
| ATCTGGCAGTAACTATTCTC+AGG | + | chr2_3:10676208-10676227 | None:intergenic | 40.0% | |
| TAACAGACTGCAAAGTGAGT+GGG | + | chr2_3:10676483-10676502 | None:intergenic | 40.0% | |
| !!! | TTTTCAGCTGATTTGGCAAG+TGG | + | chr2_3:10676576-10676595 | None:intergenic | 40.0% |
| ! | TATGACTAACGGATGCAGAT+TGG | - | chr2_3:10676634-10676653 | Msa0277850:intron | 40.0% |
| ! | ATGACTAACGGATGCAGATT+GGG | - | chr2_3:10676635-10676654 | Msa0277850:intron | 40.0% |
| !! | GGGGGGTTATTTTGTGTTTT+TGG | - | chr2_3:10676655-10676674 | Msa0277850:intron | 40.0% |
| ! | TCACGACTACTATGATAGTG+AGG | - | chr2_3:10676683-10676702 | Msa0277850:intron | 40.0% |
| CACAGTTACATTGTGATCCA+TGG | - | chr2_3:10676791-10676810 | Msa0277850:intron | 40.0% | |
| TGTGATCCATGGTATTACAG+AGG | - | chr2_3:10676802-10676821 | Msa0277850:intron | 40.0% | |
| CACAAACCTCTGTAATACCA+TGG | + | chr2_3:10676811-10676830 | None:intergenic | 40.0% | |
| CATGGTATTACAGAGGTTTG+TGG | - | chr2_3:10676809-10676828 | Msa0277850:intron | 40.0% | |
| !!! | GCAGACCTTTTTTAAAACCC+TGG | - | chr2_3:10677014-10677033 | Msa0277850:intron | 40.0% |
| CTCGTGGTTTCCTTTCAATA+AGG | - | chr2_3:10677381-10677400 | Msa0277850:intron | 40.0% | |
| CGTGGTTTCCTTTCAATAAG+GGG | - | chr2_3:10677383-10677402 | Msa0277850:intron | 40.0% | |
| TCCTTTCAATAAGGGGTTCT+TGG | - | chr2_3:10677390-10677409 | Msa0277850:intron | 40.0% | |
| TCCAAGAACCCCTTATTGAA+AGG | + | chr2_3:10677394-10677413 | None:intergenic | 40.0% | |
| CCCACAATTAACGACATTGA+TGG | + | chr2_3:10677497-10677516 | None:intergenic | 40.0% | |
| ATGTCGTTAATTGTGGGTAG+CGG | - | chr2_3:10677500-10677519 | Msa0277850:intron | 40.0% | |
| TCAACTAGTAGCGGCTATAA+TGG | + | chr2_3:10677577-10677596 | None:intergenic | 40.0% | |
| TGAATTTGTGACAACCAAGC+AGG | - | chr2_3:10677766-10677785 | Msa0277850:CDS | 40.0% | |
| CACTAGTAAAGAAAGAGGGA+GGG | - | chr2_3:10677832-10677851 | Msa0277850:CDS | 40.0% | |
| ACTAGTAAAGAAAGAGGGAG+GGG | - | chr2_3:10677833-10677852 | Msa0277850:CDS | 40.0% | |
| AGGGTGATCCATACAACAAA+TGG | - | chr2_3:10677877-10677896 | Msa0277850:intron | 40.0% | |
| GGGTGATCCATACAACAAAT+GGG | - | chr2_3:10677878-10677897 | Msa0277850:intron | 40.0% | |
| ! | CTTTGAAGAATGGAACAGCT+TGG | + | chr2_3:10677944-10677963 | None:intergenic | 40.0% |
| TATGACAACAAGAGAGCTCA+TGG | - | chr2_3:10677978-10677997 | Msa0277850:CDS | 40.0% | |
| GAGCTTGAACTTGTAAGTAC+TGG | + | chr2_3:10678039-10678058 | None:intergenic | 40.0% | |
| !! | ATTTGTTAGGGAGAGGTGTT+TGG | + | chr2_3:10678061-10678080 | None:intergenic | 40.0% |
| !! | GGCTATAATTTGTTAGGGAG+AGG | + | chr2_3:10678068-10678087 | None:intergenic | 40.0% |
| GACTAGAAGTTGGCAAAGAT+AGG | + | chr2_3:10678089-10678108 | None:intergenic | 40.0% | |
| AAAGAAGTGGGACTAGAAGT+TGG | + | chr2_3:10678099-10678118 | None:intergenic | 40.0% | |
| GTAGTCCAAAGTCTAAACTC+TGG | - | chr2_3:10678326-10678345 | Msa0277850:five_prime_UTR | 40.0% | |
| GCAAGGGAACTTGAAGAAAG+AGG | - | chr2_3:10676070-10676089 | Msa0277850:CDS | 45.0% | |
| GGGTAAAGGAATCCAACATG+AGG | + | chr2_3:10676187-10676206 | None:intergenic | 45.0% | |
| AACAGACTGCAAAGTGAGTG+GGG | + | chr2_3:10676482-10676501 | None:intergenic | 45.0% | |
| CTAACAGACTGCAAAGTGAG+TGG | + | chr2_3:10676484-10676503 | None:intergenic | 45.0% | |
| ! | TGACTAACGGATGCAGATTG+GGG | - | chr2_3:10676636-10676655 | Msa0277850:intron | 45.0% |
| TGCGATCTTAATCTCAGTCG+CGG | - | chr2_3:10676846-10676865 | Msa0277850:intron | 45.0% | |
| CAACTTGGACCATGACATCA+AGG | + | chr2_3:10676884-10676903 | None:intergenic | 45.0% | |
| TGATGTCATGGTCCAAGTTG+TGG | - | chr2_3:10676884-10676903 | Msa0277850:intron | 45.0% | |
| CAATAAGGGGTTCTTGGAAC+TGG | - | chr2_3:10677396-10677415 | Msa0277850:intron | 45.0% | |
| !! | GTTTGGTGCATTGTGGACTA+CGG | - | chr2_3:10677676-10677695 | Msa0277850:intron | 45.0% |
| GGGGTTTATGGCAAATGCAA+AGG | - | chr2_3:10677809-10677828 | Msa0277850:CDS | 45.0% | |
| GCACTAGTAAAGAAAGAGGG+AGG | - | chr2_3:10677831-10677850 | Msa0277850:CDS | 45.0% | |
| ! | GCTCTCTTGTTGTCATAACC+AGG | + | chr2_3:10677975-10677994 | None:intergenic | 45.0% |
| AGCCACTTCCCTTGATTCTC+AGG | - | chr2_3:10675924-10675943 | Msa0277850:CDS | 50.0% | |
| GCCACTTCCCTTGATTCTCA+GGG | - | chr2_3:10675925-10675944 | Msa0277850:CDS | 50.0% | |
| ACCCTGAGAATCAAGGGAAG+TGG | + | chr2_3:10675929-10675948 | None:intergenic | 50.0% | |
| GACATCGAGGTGCACATTCA+AGG | + | chr2_3:10676444-10676463 | None:intergenic | 50.0% | |
| ACAGACTGCAAAGTGAGTGG+GGG | + | chr2_3:10676481-10676500 | None:intergenic | 50.0% | |
| !! | AGCTGATTTGGCAAGTGGAG+AGG | + | chr2_3:10676571-10676590 | None:intergenic | 50.0% |
| ! | GACTAACGGATGCAGATTGG+GGG | - | chr2_3:10676637-10676656 | Msa0277850:intron | 50.0% |
| ! | ACTAACGGATGCAGATTGGG+GGG | - | chr2_3:10676638-10676657 | Msa0277850:intron | 50.0% |
| TCGCAACGCAACCACGATTA+AGG | + | chr2_3:10676951-10676970 | None:intergenic | 50.0% | |
| ! | ATCAGCCAAGTTAGCTCTCG+TGG | - | chr2_3:10677365-10677384 | Msa0277850:intron | 50.0% |
| GGAAACCACGAGAGCTAACT+TGG | + | chr2_3:10677373-10677392 | None:intergenic | 50.0% | |
| !! | AAGTACTGGCTTCCCCAACA+GGG | + | chr2_3:10678025-10678044 | None:intergenic | 50.0% |
| !! | TAAGTACTGGCTTCCCCAAC+AGG | + | chr2_3:10678026-10678045 | None:intergenic | 50.0% |
| CAGACTGCAAAGTGAGTGGG+GGG | + | chr2_3:10676480-10676499 | None:intergenic | 55.0% | |
| TGGCAAGTGGAGAGGCAAGT+GGG | + | chr2_3:10676563-10676582 | None:intergenic | 55.0% | |
| TTGGCAAGTGGAGAGGCAAG+TGG | + | chr2_3:10676564-10676583 | None:intergenic | 55.0% | |
| !! | GGGTAGCGGAGAATAGCAAG+CGG | - | chr2_3:10677514-10677533 | Msa0277850:intron | 55.0% |
| ATGGCGCTGTAGCACTGCTG+CGG | + | chr2_3:10677558-10677577 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 10675498 | 10678416 | 10675498 | ID=Msa0277850;Name=Msa0277850 |
| chr2_3 | mRNA | 10675498 | 10678416 | 10675498 | ID=Msa0277850-mRNA-1;Parent=Msa0277850;Name=Msa0277850-mRNA-1;_AED=0.27;_eAED=0.27;_QI=175|1|1|1|1|1|3|331|256 |
| chr2_3 | exon | 10675498 | 10676126 | 10675498 | ID=Msa0277850-mRNA-1:exon:4722;Parent=Msa0277850-mRNA-1 |
| chr2_3 | exon | 10677684 | 10677882 | 10677684 | ID=Msa0277850-mRNA-1:exon:4721;Parent=Msa0277850-mRNA-1 |
| chr2_3 | exon | 10677968 | 10678416 | 10677968 | ID=Msa0277850-mRNA-1:exon:4720;Parent=Msa0277850-mRNA-1 |
| chr2_3 | five_prime_UTR | 10678242 | 10678416 | 10678242 | ID=Msa0277850-mRNA-1:five_prime_utr;Parent=Msa0277850-mRNA-1 |
| chr2_3 | CDS | 10677968 | 10678241 | 10677968 | ID=Msa0277850-mRNA-1:cds;Parent=Msa0277850-mRNA-1 |
| chr2_3 | CDS | 10677684 | 10677882 | 10677684 | ID=Msa0277850-mRNA-1:cds;Parent=Msa0277850-mRNA-1 |
| chr2_3 | CDS | 10675829 | 10676126 | 10675829 | ID=Msa0277850-mRNA-1:cds;Parent=Msa0277850-mRNA-1 |
| chr2_3 | three_prime_UTR | 10675498 | 10675828 | 10675498 | ID=Msa0277850-mRNA-1:three_prime_utr;Parent=Msa0277850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
