Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244500 | AES82285.2 | 92.710 | 535 | 10 | 4 | 2 | 507 | 82 | 616 | 0.0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244500 | sp|Q9M1R2|SYPC_ARATH | 80.522 | 498 | 71 | 3 | 35 | 507 | 34 | 530 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244500 | G7KUM3 | 92.710 | 535 | 10 | 4 | 2 | 507 | 82 | 616 | 0.0 | 1003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1244500 | 0.802656 | 5.058467e-49 | -8.615850e-47 |
| Msa0011840 | Msa1244500 | 0.815237 | 1.024656e-51 | -8.615850e-47 |
| Msa0024400 | Msa1244500 | 0.801818 | 7.526278e-49 | -8.615850e-47 |
| Msa0027820 | Msa1244500 | 0.817405 | 3.353863e-52 | -8.615850e-47 |
| Msa0044000 | Msa1244500 | 0.814670 | 1.368668e-51 | -8.615850e-47 |
| Msa0051020 | Msa1244500 | 0.801730 | 7.843653e-49 | -8.615850e-47 |
| Msa0081020 | Msa1244500 | 0.800192 | 1.617681e-48 | -8.615850e-47 |
| Msa0101270 | Msa1244500 | 0.803359 | 3.620287e-49 | -8.615850e-47 |
| Msa0105410 | Msa1244500 | 0.826117 | 3.234843e-54 | -8.615850e-47 |
| Msa0106620 | Msa1244500 | 0.812339 | 4.456824e-51 | -8.615850e-47 |
| Msa0106710 | Msa1244500 | 0.811538 | 6.658444e-51 | -8.615850e-47 |
| Msa0611210 | Msa1244500 | 0.810061 | 1.389919e-50 | -8.615850e-47 |
| Msa0619050 | Msa1244500 | 0.804737 | 1.870959e-49 | -8.615850e-47 |
| Msa0626450 | Msa1244500 | 0.811533 | 6.675342e-51 | -8.615850e-47 |
| Msa0626490 | Msa1244500 | 0.808529 | 2.961099e-50 | -8.615850e-47 |
| Msa0629240 | Msa1244500 | 0.805226 | 1.478877e-49 | -8.615850e-47 |
| Msa0651550 | Msa1244500 | 0.803699 | 3.076874e-49 | -8.615850e-47 |
| Msa0664600 | Msa1244500 | 0.814765 | 1.304116e-51 | -8.615850e-47 |
| Msa0692980 | Msa1244500 | 0.819443 | 1.158377e-52 | -8.615850e-47 |
| Msa0695880 | Msa1244500 | 0.815365 | 9.595558e-52 | -8.615850e-47 |
| Msa0702720 | Msa1244500 | 0.803836 | 2.882109e-49 | -8.615850e-47 |
| Msa0706230 | Msa1244500 | 0.806336 | 8.643345e-50 | -8.615850e-47 |
| Msa0709270 | Msa1244500 | 0.800474 | 1.416880e-48 | -8.615850e-47 |
| Msa0755330 | Msa1244500 | 0.812820 | 3.497337e-51 | -8.615850e-47 |
| Msa0784480 | Msa1244500 | 0.809752 | 1.619913e-50 | -8.615850e-47 |
| Msa0818060 | Msa1244500 | 0.819077 | 1.403650e-52 | -8.615850e-47 |
| Msa0822500 | Msa1244500 | 0.815327 | 9.784033e-52 | -8.615850e-47 |
| Msa0832340 | Msa1244500 | 0.821485 | 3.938848e-53 | -8.615850e-47 |
| Msa0833530 | Msa1244500 | 0.817460 | 3.260482e-52 | -8.615850e-47 |
| Msa0127800 | Msa1244500 | 0.823361 | 1.443412e-53 | -8.615850e-47 |
| Msa0163510 | Msa1244500 | 0.810354 | 1.201670e-50 | -8.615850e-47 |
| Msa0200990 | Msa1244500 | 0.807372 | 5.221162e-50 | -8.615850e-47 |
| Msa0204960 | Msa1244500 | 0.821567 | 3.770521e-53 | -8.615850e-47 |
| Msa0211150 | Msa1244500 | 0.807918 | 3.997497e-50 | -8.615850e-47 |
| Msa0214550 | Msa1244500 | 0.875869 | 2.192548e-68 | -8.615850e-47 |
| Msa0234090 | Msa1244500 | 0.807987 | 3.864941e-50 | -8.615850e-47 |
| Msa0237420 | Msa1244500 | 0.852191 | 5.426340e-61 | -8.615850e-47 |
| Msa1226270 | Msa1244500 | 0.812589 | 3.929028e-51 | -8.615850e-47 |
| Msa1226460 | Msa1244500 | 0.803754 | 2.997952e-49 | -8.615850e-47 |
| Msa1228040 | Msa1244500 | 0.810221 | 1.283713e-50 | -8.615850e-47 |
| Msa1244500 | Msa1271130 | 0.847758 | 9.444080e-60 | -8.615850e-47 |
| Msa1244500 | Msa1285550 | 0.904160 | 1.639993e-79 | -8.615850e-47 |
| Msa1244500 | Msa1299400 | -0.822330 | 2.509248e-53 | -8.615850e-47 |
| Msa1244500 | Msa1325920 | 0.902637 | 7.908691e-79 | -8.615850e-47 |
| Msa1244500 | Msa1331050 | -0.830704 | 2.528548e-55 | -8.615850e-47 |
| Msa1244500 | Msa1341840 | 0.801135 | 1.038614e-48 | -8.615850e-47 |
| Msa1244500 | Msa1345100 | 0.863397 | 2.562416e-64 | -8.615850e-47 |
| Msa1244500 | Msa1419690 | 0.844307 | 8.198923e-59 | -8.615850e-47 |
| Msa1244500 | Msa1434740 | 0.817670 | 2.923841e-52 | -8.615850e-47 |
| Msa1244500 | Msa1449260 | 0.800401 | 1.466371e-48 | -8.615850e-47 |
| Msa1244500 | Msa1452710 | 0.802550 | 5.320804e-49 | -8.615850e-47 |
| Msa1244500 | Msa1454900 | 0.801248 | 9.849059e-49 | -8.615850e-47 |
| Msa1244500 | Msa1458770 | 0.803936 | 2.747412e-49 | -8.615850e-47 |
| Msa0432160 | Msa1244500 | 0.806255 | 8.989978e-50 | -8.615850e-47 |
| Msa0450400 | Msa1244500 | -0.816677 | 4.888119e-52 | -8.615850e-47 |
| Msa0458460 | Msa1244500 | 0.801559 | 8.504007e-49 | -8.615850e-47 |
| Msa0468250 | Msa1244500 | 0.807339 | 5.305010e-50 | -8.615850e-47 |
| Msa0468270 | Msa1244500 | 0.825762 | 3.927447e-54 | -8.615850e-47 |
| Msa0476650 | Msa1244500 | 0.803932 | 2.752701e-49 | -8.615850e-47 |
| Msa0476680 | Msa1244500 | 0.808186 | 3.504623e-50 | -8.615850e-47 |
| Msa0980140 | Msa1244500 | 0.813437 | 2.561446e-51 | -8.615850e-47 |
| Msa0992510 | Msa1244500 | 0.821686 | 3.539054e-53 | -8.615850e-47 |
| Msa1012800 | Msa1244500 | 0.822254 | 2.613395e-53 | -8.615850e-47 |
| Msa1023500 | Msa1244500 | 0.804106 | 2.533123e-49 | -8.615850e-47 |
| Msa1034500 | Msa1244500 | 0.808995 | 2.354132e-50 | -8.615850e-47 |
| Msa1044680 | Msa1244500 | 0.800787 | 1.223556e-48 | -8.615850e-47 |
| Msa1047760 | Msa1244500 | 0.801035 | 1.088703e-48 | -8.615850e-47 |
| Msa1089450 | Msa1244500 | 0.829597 | 4.709983e-55 | -8.615850e-47 |
| Msa1101090 | Msa1244500 | 0.826595 | 2.488177e-54 | -8.615850e-47 |
| Msa1104560 | Msa1244500 | 0.801070 | 1.070683e-48 | -8.615850e-47 |
| Msa0240900 | Msa1244500 | 0.821964 | 3.050787e-53 | -8.615850e-47 |
| Msa0244640 | Msa1244500 | 0.814804 | 1.278612e-51 | -8.615850e-47 |
| Msa0251710 | Msa1244500 | 0.814360 | 1.603237e-51 | -8.615850e-47 |
| Msa0257490 | Msa1244500 | 0.803599 | 3.227501e-49 | -8.615850e-47 |
| Msa0263920 | Msa1244500 | 0.817798 | 2.735534e-52 | -8.615850e-47 |
| Msa0277850 | Msa1244500 | 0.807661 | 4.533593e-50 | -8.615850e-47 |
| Msa0278570 | Msa1244500 | 0.810989 | 8.759190e-51 | -8.615850e-47 |
| Msa0279850 | Msa1244500 | 0.804773 | 1.838775e-49 | -8.615850e-47 |
| Msa0281530 | Msa1244500 | 0.813421 | 2.581222e-51 | -8.615850e-47 |
| Msa0290720 | Msa1244500 | 0.823053 | 1.703287e-53 | -8.615850e-47 |
| Msa0296790 | Msa1244500 | 0.804880 | 1.747053e-49 | -8.615850e-47 |
| Msa0317970 | Msa1244500 | 0.838837 | 2.267573e-57 | -8.615850e-47 |
| Msa0342310 | Msa1244500 | 0.808188 | 3.501291e-50 | -8.615850e-47 |
| Msa0358400 | Msa1244500 | 0.804186 | 2.438016e-49 | -8.615850e-47 |
| Msa1145810 | Msa1244500 | 0.801649 | 8.149769e-49 | -8.615850e-47 |
| Msa1155170 | Msa1244500 | -0.801094 | 1.058623e-48 | -8.615850e-47 |
| Msa1186020 | Msa1244500 | 0.803533 | 3.331685e-49 | -8.615850e-47 |
| Msa1190920 | Msa1244500 | 0.802748 | 4.841281e-49 | -8.615850e-47 |
| Msa1191180 | Msa1244500 | 0.988607 | 1.092699e-174 | -8.615850e-47 |
| Msa1211230 | Msa1244500 | -0.837295 | 5.655117e-57 | -8.615850e-47 |
| Msa1211420 | Msa1244500 | -0.821878 | 3.194130e-53 | -8.615850e-47 |
| Msa1213250 | Msa1244500 | 0.807128 | 5.880063e-50 | -8.615850e-47 |
| Msa1213890 | Msa1244500 | 0.811820 | 5.781387e-51 | -8.615850e-47 |
| Msa0521010 | Msa1244500 | 0.808660 | 2.777136e-50 | -8.615850e-47 |
| Msa0527190 | Msa1244500 | 0.800100 | 1.688248e-48 | -8.615850e-47 |
| Msa0530050 | Msa1244500 | 0.802580 | 5.243409e-49 | -8.615850e-47 |
| Msa0855870 | Msa1244500 | 0.824275 | 8.814201e-54 | -8.615850e-47 |
| Msa0876190 | Msa1244500 | 0.807093 | 5.980090e-50 | -8.615850e-47 |
| Msa0934140 | Msa1244500 | 0.807311 | 5.377616e-50 | -8.615850e-47 |
| Msa0936380 | Msa1244500 | 0.804142 | 2.489189e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244500 | MtrunA17_Chr7g0270811 | 92.628 | 529 | 10 | 4 | 8 | 507 | 1 | 529 | 0.0 | 985 |
| Msa1244500 | MtrunA17_Chr3g0143341 | 65.835 | 521 | 118 | 2 | 47 | 507 | 3 | 523 | 0.0 | 705 |
| Msa1244500 | MtrunA17_Chr3g0143331 | 54.967 | 453 | 83 | 6 | 69 | 455 | 7 | 404 | 2.34e-160 | 461 |
| Msa1244500 | MtrunA17_Chr3g0096421 | 71.383 | 311 | 73 | 1 | 213 | 507 | 9 | 319 | 1.74e-158 | 453 |
| Msa1244500 | MtrunA17_Chr3g0133261 | 38.095 | 483 | 261 | 8 | 55 | 507 | 68 | 542 | 1.26e-117 | 357 |
| Msa1244500 | MtrunA17_Chr3g0096431 | 68.027 | 147 | 47 | 0 | 42 | 188 | 4 | 150 | 3.78e-69 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1244500 | AT3G62120.3 | 80.522 | 498 | 71 | 3 | 35 | 507 | 21 | 517 | 0.0 | 826 |
| Msa1244500 | AT3G62120.2 | 80.522 | 498 | 71 | 3 | 35 | 507 | 34 | 530 | 0.0 | 825 |
| Msa1244500 | AT3G62120.1 | 80.522 | 498 | 71 | 3 | 35 | 507 | 34 | 530 | 0.0 | 825 |
| Msa1244500 | AT5G52520.1 | 37.917 | 509 | 276 | 8 | 30 | 507 | 44 | 543 | 2.91e-121 | 366 |
| Msa1244500 | AT5G10880.1 | 58.824 | 221 | 69 | 3 | 309 | 507 | 89 | 309 | 4.79e-80 | 252 |
Find 139 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCTTGGTCAATGGCTATT+TGG | 0.152091 | 8_2:+33006921 | Msa1244500:CDS |
| GTTTCAGGTTCTTGAGATTT+TGG | 0.162156 | 8_2:+33009056 | Msa1244500:intron |
| ATTGAGTACTATGATATTTC+TGG | 0.186757 | 8_2:+33006884 | Msa1244500:CDS |
| GAAGCTAGTTCACCATTTAA+TGG | 0.214540 | 8_2:+33011693 | Msa1244500:three_prime_UTR |
| CAGTATGACCACTTCTTTGC+AGG | 0.254878 | 8_2:-33011634 | None:intergenic |
| GTTTGTTTCTAATACTGTTC+TGG | 0.275959 | 8_2:+33007596 | Msa1244500:CDS |
| TAACCTGATTGTTGTGGTTT+TGG | 0.279807 | 8_2:-33006538 | None:intergenic |
| GCAGGAGTCGTGAGTTTCTT+TGG | 0.293371 | 8_2:+33008677 | Msa1244500:intron |
| AGGTGCAACTTCTCATTGTT+TGG | 0.296531 | 8_2:+33009311 | Msa1244500:CDS |
| CTTATACCTTCGGGGAGTTC+TGG | 0.310554 | 8_2:-33010855 | None:intergenic |
| TAAATCAGATTCTCCAGATT+TGG | 0.310695 | 8_2:-33007945 | None:intergenic |
| TGCCCTTTACCCAGGTTGCT+TGG | 0.318425 | 8_2:+33007918 | Msa1244500:intron |
| ACCTTGGTCAATGGCTATTT+GGG | 0.328192 | 8_2:+33006922 | Msa1244500:CDS |
| CGACATTGATAATGATGATT+TGG | 0.336778 | 8_2:+33009949 | Msa1244500:CDS |
| CTGCAAAGAAGTGGTCATAC+TGG | 0.344091 | 8_2:+33011635 | Msa1244500:CDS |
| GCCCTTTACCCAGGTTGCTT+GGG | 0.351835 | 8_2:+33007919 | Msa1244500:intron |
| ACTTGAACTGAAGCTACTTT+AGG | 0.353590 | 8_2:-33009569 | None:intergenic |
| TACATAACAGTTTCACTAGT+TGG | 0.356914 | 8_2:-33007989 | None:intergenic |
| GTGTATCTATGAAGAGTATT+TGG | 0.358094 | 8_2:+33009089 | Msa1244500:CDS |
| GTTGCTTGGGTGACCAAATC+TGG | 0.358966 | 8_2:+33007932 | Msa1244500:CDS |
| TCAGTGAAGGCACCATTAAA+TGG | 0.362787 | 8_2:-33011705 | None:intergenic |
| GGGGTGATGGTGATGGTTCA+TGG | 0.366349 | 8_2:+33009521 | Msa1244500:CDS |
| CTTACTACTCTAAGTGGATA+AGG | 0.369921 | 8_2:+33008014 | Msa1244500:CDS |
| TGGGTAATCTTCAGCTAGCT+AGG | 0.389152 | 8_2:-33006258 | None:intergenic |
| TTCTAATACTGTTCTGGAAA+AGG | 0.393006 | 8_2:+33007602 | Msa1244500:CDS |
| TGTATTCCACGACCAGTGTT+TGG | 0.394220 | 8_2:-33009288 | None:intergenic |
| GGTGCAACTTCTCATTGTTT+GGG | 0.396799 | 8_2:+33009312 | Msa1244500:CDS |
| TTACTACTCTAAGTGGATAA+GGG | 0.421374 | 8_2:+33008015 | Msa1244500:CDS |
| GCAAGGACAAAGGGTGAGAC+AGG | 0.427300 | 8_2:+33010798 | Msa1244500:CDS |
| GCTTACAGTTCGAGTACTAT+AGG | 0.427959 | 8_2:-33009415 | None:intergenic |
| CTCACTCTGTGTGTTGTGTT+GGG | 0.428089 | 8_2:-33006277 | None:intergenic |
| GGCATAGTATTCAATTGATC+AGG | 0.429044 | 8_2:-33011857 | None:intergenic |
| TGGTGCCTTCACTGAATTTG+TGG | 0.429607 | 8_2:+33011713 | Msa1244500:three_prime_UTR |
| TGTAGGTGGTGGAAAGAAGA+AGG | 0.433758 | 8_2:+33006629 | Msa1244500:intron |
| TTGTTCAATTTCCATTCCAT+TGG | 0.436683 | 8_2:-33011913 | None:intergenic |
| CGTGAGTTTCTTTGGCAAGA+AGG | 0.437042 | 8_2:+33008685 | Msa1244500:CDS |
| AGTGGTGCAATGTTGTTAGA+TGG | 0.437519 | 8_2:+33008068 | Msa1244500:CDS |
| GTTGCTACATTCTCAGACCT+TGG | 0.440376 | 8_2:+33006906 | Msa1244500:CDS |
| TTGGCAGTTCCTGTCGTAAA+GGG | 0.443422 | 8_2:+33009108 | Msa1244500:CDS |
| ACTCACTCTGTGTGTTGTGT+TGG | 0.444327 | 8_2:-33006278 | None:intergenic |
| ACCTTGTTGTGTTGGAAAGA+AGG | 0.446489 | 8_2:-33006346 | None:intergenic |
| CTAGTTGGACGAATAGCAAT+AGG | 0.448569 | 8_2:-33007974 | None:intergenic |
| AGTGAGCTTGAGAAGTTTGC+TGG | 0.448820 | 8_2:+33009138 | Msa1244500:CDS |
| CTGGAGCAAAACCCTTGATA+TGG | 0.451172 | 8_2:-33007632 | None:intergenic |
| TCGTCATCCTTCACAATGGC+GGG | 0.453103 | 8_2:+33006457 | Msa1244500:CDS |
| GGAAAGAAGGCGAGAGAGAA+TGG | 0.455751 | 8_2:-33006333 | None:intergenic |
| CGTGCTGTTCGTCGTGATAG+TGG | 0.458000 | 8_2:+33009917 | Msa1244500:CDS |
| CAATGGTCTGGCAGAACTCA+TGG | 0.460207 | 8_2:+33009391 | Msa1244500:CDS |
| TGAGTATCAGCATCTTTGTA+AGG | 0.463332 | 8_2:-33009608 | None:intergenic |
| CGCAACTGTGAATATGTTGT+TGG | 0.465083 | 8_2:+33009652 | Msa1244500:CDS |
| TTTGGTGCAAACCAGAGGAT+TGG | 0.465554 | 8_2:-33011937 | None:intergenic |
| CACCACTGATTAAGTTTCAA+AGG | 0.466130 | 8_2:-33008052 | None:intergenic |
| AAAAGATGATCTTAGCTCCT+TGG | 0.467478 | 8_2:+33010098 | Msa1244500:CDS |
| GCCAGAGACAACTATTCTCC+TGG | 0.468582 | 8_2:+33009701 | Msa1244500:CDS |
| CTTATCCACTTAGAGTAGTA+AGG | 0.470822 | 8_2:-33008013 | None:intergenic |
| TGCAAAGAAGTGGTCATACT+GGG | 0.472500 | 8_2:+33011636 | Msa1244500:CDS |
| CAACCAAAACCACAACAATC+AGG | 0.476529 | 8_2:+33006535 | Msa1244500:CDS |
| ATAAACAAGCTGTGGTCAAA+AGG | 0.481778 | 8_2:-33011878 | None:intergenic |
| AATTGAACAATCCAATCCTC+TGG | 0.482198 | 8_2:+33011926 | Msa1244500:three_prime_UTR |
| AGGGAGAGAAAGCAATGGTC+TGG | 0.482327 | 8_2:+33009379 | Msa1244500:CDS |
| CATATTCACAGTTGCGGTAC+AGG | 0.488743 | 8_2:-33009645 | None:intergenic |
| CACTGAGAATATTTCCATCC+AGG | 0.489221 | 8_2:-33009719 | None:intergenic |
| TTTACAGGTTGTTGTGAATG+GGG | 0.489475 | 8_2:+33006856 | Msa1244500:intron |
| ATTAGGTTTGACCAATAAGA+AGG | 0.491019 | 8_2:+33006671 | Msa1244500:CDS |
| GGGTAATCTTCAGCTAGCTA+GGG | 0.492326 | 8_2:-33006257 | None:intergenic |
| CATTCTCAGACCTTGGTCAA+TGG | 0.493545 | 8_2:+33006913 | Msa1244500:CDS |
| AGGCTGAAAACTTCGGAGAA+TGG | 0.496139 | 8_2:+33006691 | Msa1244500:CDS |
| GTCAAGAAAGAAACTAGATT+AGG | 0.497958 | 8_2:+33006654 | Msa1244500:CDS |
| GGGAGTTCTGGCTGATCAAA+GGG | 0.502508 | 8_2:-33010843 | None:intergenic |
| TTTATTCCAAACACTGGTCG+TGG | 0.504832 | 8_2:+33009282 | Msa1244500:CDS |
| TCCAGGAGAATAGTTGTCTC+TGG | 0.507302 | 8_2:-33009702 | None:intergenic |
| GTGAATATGTTGTTGGAAGC+AGG | 0.507911 | 8_2:+33009659 | Msa1244500:CDS |
| ACAGAGTGAGTCTCCTCTTA+CGG | 0.512884 | 8_2:+33006290 | Msa1244500:five_prime_UTR |
| CTCGTCATCCTTCACAATGG+CGG | 0.514201 | 8_2:+33006456 | Msa1244500:CDS |
| TGATAATGATGATTTGGTTG+AGG | 0.517380 | 8_2:+33009955 | Msa1244500:CDS |
| TTTGGCAGTTCCTGTCGTAA+AGG | 0.519122 | 8_2:+33009107 | Msa1244500:CDS |
| TATGTTAAAGCAAGGACAAA+GGG | 0.521676 | 8_2:+33010789 | Msa1244500:CDS |
| ATCGGTCCCCGCCATTGTGA+AGG | 0.522242 | 8_2:-33006464 | None:intergenic |
| AAAGGAGAAGGACCATATCA+AGG | 0.526120 | 8_2:+33007620 | Msa1244500:CDS |
| GGGGAGTTCTGGCTGATCAA+AGG | 0.526296 | 8_2:-33010844 | None:intergenic |
| AAGAGCGATGGTGCCGTAAG+AGG | 0.527177 | 8_2:-33006303 | None:intergenic |
| GCATTCAGATCATACATACA+TGG | 0.527313 | 8_2:+33010047 | Msa1244500:CDS |
| TTATGTCGATTGAAAGCCAA+TGG | 0.529524 | 8_2:+33011897 | Msa1244500:three_prime_UTR |
| GATAAACTATGAAAATGAGA+AGG | 0.535170 | 8_2:+33009359 | Msa1244500:CDS |
| AACACTGGTCGTGGAATACA+AGG | 0.537405 | 8_2:+33009291 | Msa1244500:CDS |
| TACTGTTCTGGAAAAGGAGA+AGG | 0.537973 | 8_2:+33007608 | Msa1244500:CDS |
| TCAGCATCTTTGTAAGGCAC+AGG | 0.554993 | 8_2:-33009602 | None:intergenic |
| TGTATCCTTACTACTCTAAG+TGG | 0.558724 | 8_2:+33008008 | Msa1244500:CDS |
| GTTGTCTCTGGCATCTGACT+CGG | 0.558998 | 8_2:-33009690 | None:intergenic |
| GTGAAATAACCTGATTGTTG+TGG | 0.560703 | 8_2:-33006544 | None:intergenic |
| AATAAGAAGGCTGAAAACTT+CGG | 0.562437 | 8_2:+33006684 | Msa1244500:CDS |
| ACGGTGTTACCTTGTTGTGT+TGG | 0.565907 | 8_2:-33006354 | None:intergenic |
| TCGATTGAAAGCCAATGGAA+TGG | 0.566873 | 8_2:+33011902 | Msa1244500:three_prime_UTR |
| TGAACTGAAGCTACTTTAGG+TGG | 0.574866 | 8_2:-33009566 | None:intergenic |
| ACAGATTGGGGTGATGGTGA+TGG | 0.576038 | 8_2:+33009514 | Msa1244500:intron |
| TGCCTTTGAAACTTAATCAG+TGG | 0.577853 | 8_2:+33008050 | Msa1244500:CDS |
| GCCTTCTTTCCAACACAACA+AGG | 0.579588 | 8_2:+33006345 | Msa1244500:five_prime_UTR |
| TAGGCATTTATTCCAAACAC+TGG | 0.579675 | 8_2:+33009276 | Msa1244500:intron |
| CTTAGCTCCTTGGTGTGACG+AGG | 0.580104 | 8_2:+33010108 | Msa1244500:CDS |
| GAGACAACTATTCTCCTGGA+TGG | 0.582790 | 8_2:+33009705 | Msa1244500:CDS |
| AATGGTCTGGCAGAACTCAT+GGG | 0.584270 | 8_2:+33009392 | Msa1244500:CDS |
| TACAAAGATGCTGATACTCA+AGG | 0.585962 | 8_2:+33009611 | Msa1244500:CDS |
| AAGGAGAAGGACCATATCAA+GGG | 0.586256 | 8_2:+33007621 | Msa1244500:CDS |
| TCATGGTGATGACAAGGGAT+TGG | 0.590460 | 8_2:+33009538 | Msa1244500:CDS |
| TATTCTCAGTGGGAAATGAA+AGG | 0.590826 | 8_2:+33009731 | Msa1244500:CDS |
| TGGATGGAAATATTCTCAGT+GGG | 0.591259 | 8_2:+33009721 | Msa1244500:CDS |
| AGCTCCTTGGTGTGACGAGG+AGG | 0.591730 | 8_2:+33010111 | Msa1244500:CDS |
| AAGTTACTAGATCTTGATTG+TGG | 0.596416 | 8_2:+33011663 | Msa1244500:exon |
| TACTACTCTAAGTGGATAAG+GGG | 0.599458 | 8_2:+33008016 | Msa1244500:CDS |
| ATAAACTATGAAAATGAGAA+GGG | 0.599751 | 8_2:+33009360 | Msa1244500:CDS |
| TAACATTTGGTGCAAACCAG+AGG | 0.603359 | 8_2:-33011942 | None:intergenic |
| CGTCATCCTTCACAATGGCG+GGG | 0.607064 | 8_2:+33006458 | Msa1244500:CDS |
| AATGGAACGTGCAAGAGCGA+TGG | 0.607251 | 8_2:-33006315 | None:intergenic |
| GTGGTGCAATGTTGTTAGAT+GGG | 0.608044 | 8_2:+33008069 | Msa1244500:CDS |
| GAGCTTGAGAAGTTTGCTGG+TGG | 0.612213 | 8_2:+33009141 | Msa1244500:CDS |
| CATTCAGATCATACATACAT+GGG | 0.613469 | 8_2:+33010048 | Msa1244500:CDS |
| ATATGTTAAAGCAAGGACAA+AGG | 0.615285 | 8_2:+33010788 | Msa1244500:CDS |
| CAACAACATATTCACAGTTG+CGG | 0.617944 | 8_2:-33009651 | None:intergenic |
| CAATCGACATAAACAAGCTG+TGG | 0.618202 | 8_2:-33011886 | None:intergenic |
| CAGGCAAGCCTGCAAAGAAG+TGG | 0.622850 | 8_2:+33011626 | Msa1244500:CDS |
| ACTTTACACTACCAGTGTTG+AGG | 0.626381 | 8_2:+33009164 | Msa1244500:CDS |
| AAAGGAGGAAGCAGATACAG+AGG | 0.626885 | 8_2:+33008726 | Msa1244500:CDS |
| CAGTATTAGAAACAAACAGA+GGG | 0.633054 | 8_2:-33007590 | None:intergenic |
| TCAGACACACACCTCAACAC+TGG | 0.635226 | 8_2:-33009175 | None:intergenic |
| CTTGCCTGACGAAAAGCACA+CGG | 0.649401 | 8_2:-33011611 | None:intergenic |
| CTGGATGGAAATATTCTCAG+TGG | 0.651227 | 8_2:+33009720 | Msa1244500:CDS |
| CACTATCACGACGAACAGCA+CGG | 0.655477 | 8_2:-33009916 | None:intergenic |
| GAACAATGCTTATACCTTCG+GGG | 0.657190 | 8_2:-33010863 | None:intergenic |
| GTAATCCACAAATTCAGTGA+AGG | 0.662680 | 8_2:-33011718 | None:intergenic |
| TCCCAAATAGCCATTGACCA+AGG | 0.672878 | 8_2:-33006923 | None:intergenic |
| GATGGTTCATGGTGATGACA+AGG | 0.675247 | 8_2:+33009532 | Msa1244500:CDS |
| TGAGAAGGGAGAGAAAGCAA+TGG | 0.680929 | 8_2:+33009374 | Msa1244500:CDS |
| CTTCGGAGAATGGTATTCCG+AGG | 0.682280 | 8_2:+33006701 | Msa1244500:CDS |
| GTGCTCGTCATCCTTCACAA+TGG | 0.693246 | 8_2:+33006453 | Msa1244500:CDS |
| GATCAGCCAGAACTCCCCGA+AGG | 0.697086 | 8_2:+33010849 | Msa1244500:CDS |
| CATACCTCCTCGTCACACCA+AGG | 0.697417 | 8_2:-33010115 | None:intergenic |
| ACAGTATTAGAAACAAACAG+AGG | 0.698430 | 8_2:-33007591 | None:intergenic |
| GCAAAGAAGTGGTCATACTG+GGG | 0.701004 | 8_2:+33011637 | Msa1244500:CDS |
| ATGGTTCATGGTGATGACAA+GGG | 0.721801 | 8_2:+33009533 | Msa1244500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAAATATAAAATATT+TGG | - | chr8_2:33008564-33008583 | None:intergenic | 0.0% |
| !! | ATGAATAAATAAATACATTT+GGG | - | chr8_2:33006999-33007018 | None:intergenic | 10.0% |
| !! | AATGAATAAATAAATACATT+TGG | - | chr8_2:33007000-33007019 | None:intergenic | 10.0% |
| !! | AAAATTAAATGAGATTTATT+CGG | - | chr8_2:33009888-33009907 | None:intergenic | 10.0% |
| !! | TTAAATAAGATATATAATTG+AGG | + | chr8_2:33010268-33010287 | Msa1244500:intron | 10.0% |
| !!! | TTGAAAATTTTCTTATATAT+AGG | + | chr8_2:33011406-33011425 | Msa1244500:intron | 10.0% |
| !! | AATATTCACAAAAATAACTA+TGG | - | chr8_2:33007468-33007487 | None:intergenic | 15.0% |
| !!! | CCATAAAACAAATATTTTTA+AGG | - | chr8_2:33007756-33007775 | None:intergenic | 15.0% |
| !!! | CCTTAAAAATATTTGTTTTA+TGG | + | chr8_2:33007753-33007772 | Msa1244500:intron | 15.0% |
| !! | CTAATTATAATAATATACAC+TGG | - | chr8_2:33010646-33010665 | None:intergenic | 15.0% |
| !! | TGGCTATATATTTAAATTTA+CGG | + | chr8_2:33010709-33010728 | Msa1244500:intron | 15.0% |
| !! | ATATATTTAAATTTACGGTT+TGG | + | chr8_2:33010714-33010733 | Msa1244500:intron | 15.0% |
| !!! | AGTTTTACTTTGATTTTATA+CGG | + | chr8_2:33011791-33011810 | Msa1244500:three_prime_UTR | 15.0% |
| !! | TTTATGAATGAATTGAGAAA+CGG | - | chr8_2:33006376-33006395 | None:intergenic | 20.0% |
| !!! | TTGATTTGGATTAATTTTAC+AGG | + | chr8_2:33006841-33006860 | Msa1244500:intron | 20.0% |
| !!! | TTTTACTATGTTATCTCAAT+TGG | + | chr8_2:33007236-33007255 | Msa1244500:intron | 20.0% |
| !!! | TATTTTAAAAACAAATGTGC+AGG | + | chr8_2:33007518-33007537 | Msa1244500:intron | 20.0% |
| !!! | ATCTTCATTTTCTTTATTTC+TGG | - | chr8_2:33007555-33007574 | None:intergenic | 20.0% |
| !!! | ATAATTTTAATATCAGTGCT+AGG | + | chr8_2:33008222-33008241 | Msa1244500:intron | 20.0% |
| !! | TTCATGAAATAACTATTTGA+TGG | - | chr8_2:33008756-33008775 | None:intergenic | 20.0% |
| !! | TTAGAAAAATGTACTTTCAA+AGG | - | chr8_2:33009018-33009037 | None:intergenic | 20.0% |
| !! | TTCTAAACTATAATTGTTTC+AGG | + | chr8_2:33009041-33009060 | Msa1244500:intron | 20.0% |
| !!! | TTGAGATTTTGGAATTATAT+CGG | + | chr8_2:33009067-33009086 | Msa1244500:CDS | 20.0% |
| !! | ATAAACTATGAAAATGAGAA+GGG | + | chr8_2:33009360-33009379 | Msa1244500:CDS | 20.0% |
| !! | ATGACTAAAAAAACAAAACT+TGG | - | chr8_2:33010196-33010215 | None:intergenic | 20.0% |
| !!! | TTTTAGTCATTTCATTGTTT+TGG | + | chr8_2:33010206-33010225 | Msa1244500:intron | 20.0% |
| !! | ATATCAAAATATTACGCATA+CGG | - | chr8_2:33010679-33010698 | None:intergenic | 20.0% |
| !!! | TGGTTTCTTTTCTTATATAA+AGG | - | chr8_2:33011180-33011199 | None:intergenic | 20.0% |
| !!! | TTGTGACTTTTTCTTATAAA+TGG | + | chr8_2:33011369-33011388 | Msa1244500:intron | 20.0% |
| !!! | TGTGACTTTTTCTTATAAAT+GGG | + | chr8_2:33011370-33011389 | Msa1244500:intron | 20.0% |
| !!! | AATTTTCTTATATATAGGAC+CGG | + | chr8_2:33011411-33011430 | Msa1244500:intron | 20.0% |
| ! | AATTCAATTGAATTGTACCT+CGG | - | chr8_2:33006721-33006740 | None:intergenic | 25.0% |
| !!! | TTTTCACCTGATTTGTTTTT+AGG | + | chr8_2:33006751-33006770 | Msa1244500:intron | 25.0% |
| !!! | TTTTCATTTTTGACTAGTGT+AGG | + | chr8_2:33006798-33006817 | Msa1244500:intron | 25.0% |
| ! | ATTGAGTACTATGATATTTC+TGG | + | chr8_2:33006884-33006903 | Msa1244500:CDS | 25.0% |
| ! | TTAGTTGTTGATCTATACTA+AGG | + | chr8_2:33007018-33007037 | Msa1244500:intron | 25.0% |
| ! | AGAAAAAATTGTGCTATAAC+TGG | - | chr8_2:33007112-33007131 | None:intergenic | 25.0% |
| !!! | TGGTTGTGTTTTTAGAATAA+AGG | + | chr8_2:33007693-33007712 | Msa1244500:intron | 25.0% |
| ! | AAAAAATAATGCCTGATGAA+TGG | - | chr8_2:33008112-33008131 | None:intergenic | 25.0% |
| !!! | AAATTTGCTATAACAGAGAA+AGG | - | chr8_2:33008153-33008172 | None:intergenic | 25.0% |
| ! | AAGAAATTGAGAGTTGAAAA+GGG | - | chr8_2:33008264-33008283 | None:intergenic | 25.0% |
| ! | TAAGAAATTGAGAGTTGAAA+AGG | - | chr8_2:33008265-33008284 | None:intergenic | 25.0% |
| ! | TTCAACTCTCAATTTCTTAT+TGG | + | chr8_2:33008266-33008285 | Msa1244500:intron | 25.0% |
| ! | TCAACTCTCAATTTCTTATT+GGG | + | chr8_2:33008267-33008286 | Msa1244500:intron | 25.0% |
| ! | TTATTGGGTGAAATTCATTT+GGG | - | chr8_2:33008352-33008371 | None:intergenic | 25.0% |
| !!! | CTTATACCAATTTTAATTGC+AGG | + | chr8_2:33008659-33008678 | Msa1244500:intron | 25.0% |
| !! | ACTGCATTAATTTTCATCTT+TGG | + | chr8_2:33008807-33008826 | Msa1244500:intron | 25.0% |
| !! | TTTTGATGTAAATTCTTCCT+AGG | + | chr8_2:33009257-33009276 | Msa1244500:intron | 25.0% |
| ! | GATAAACTATGAAAATGAGA+AGG | + | chr8_2:33009359-33009378 | Msa1244500:CDS | 25.0% |
| !!! | AATCTCATTTAATTTTGCAC+AGG | + | chr8_2:33009892-33009911 | Msa1244500:intron | 25.0% |
| ! | CTATCTTAAAATCTGGATTA+TGG | - | chr8_2:33010165-33010184 | None:intergenic | 25.0% |
| ! | AAGCATACTATCTTAAAATC+TGG | - | chr8_2:33010172-33010191 | None:intergenic | 25.0% |
| !!! | GCGTTGTTTTTTTATTTAAC+TGG | - | chr8_2:33010450-33010469 | None:intergenic | 25.0% |
| ! | CAAGTTCATAATAAAACTGA+AGG | + | chr8_2:33010558-33010577 | Msa1244500:intron | 25.0% |
| ! | AATAATATACACTGGACAAT+CGG | - | chr8_2:33010638-33010657 | None:intergenic | 25.0% |
| !! | TTTTCTTGGTAAACTGTTAT+TGG | + | chr8_2:33010739-33010758 | Msa1244500:intron | 25.0% |
| !!! | TTATTGGTTTATAATGCTTC+AGG | + | chr8_2:33010755-33010774 | Msa1244500:intron | 25.0% |
| ! | TGGAAAAATATGTTAAAGCA+AGG | + | chr8_2:33010781-33010800 | Msa1244500:CDS | 25.0% |
| !! | TCTTTTCTTATATAAAGGAC+CGG | - | chr8_2:33011175-33011194 | None:intergenic | 25.0% |
| !! | TTGTTGTGTTTTGTTGTCAT+CGG | - | chr8_2:33006485-33006504 | None:intergenic | 30.0% |
| !!! | TGGTTGTTTTGGTTGTTTTT+GGG | - | chr8_2:33006521-33006540 | None:intergenic | 30.0% |
| !!! | TTGGTTGTTTTGGTTGTTTT+TGG | - | chr8_2:33006522-33006541 | None:intergenic | 30.0% |
| CATTCCACGTTTCAATTTAA+CGG | + | chr8_2:33006594-33006613 | Msa1244500:intron | 30.0% | |
| GTCAAGAAAGAAACTAGATT+AGG | + | chr8_2:33006654-33006673 | Msa1244500:CDS | 30.0% | |
| ATTAGGTTTGACCAATAAGA+AGG | + | chr8_2:33006671-33006690 | Msa1244500:CDS | 30.0% | |
| AATAAGAAGGCTGAAAACTT+CGG | + | chr8_2:33006684-33006703 | Msa1244500:CDS | 30.0% | |
| GTTTGACCTAAAAACAAATC+AGG | - | chr8_2:33006760-33006779 | None:intergenic | 30.0% | |
| ! | TTAGGTCAAACTTGTTTATC+TGG | + | chr8_2:33006769-33006788 | Msa1244500:intron | 30.0% |
| ! | ATTTTACAGGTTGTTGTGAA+TGG | + | chr8_2:33006854-33006873 | Msa1244500:intron | 30.0% |
| ! | TTTTACAGGTTGTTGTGAAT+GGG | + | chr8_2:33006855-33006874 | Msa1244500:intron | 30.0% |
| TGTTGATCTATACTAAGGTT+CGG | + | chr8_2:33007023-33007042 | Msa1244500:intron | 30.0% | |
| !! | AAAACCAATTTTCGAGCTTA+CGG | + | chr8_2:33007052-33007071 | Msa1244500:intron | 30.0% |
| !!! | CTGGTCTATTTTAGTCATAA+GGG | - | chr8_2:33007093-33007112 | None:intergenic | 30.0% |
| !!! | ACTGGTCTATTTTAGTCATA+AGG | - | chr8_2:33007094-33007113 | None:intergenic | 30.0% |
| CAGTATTAGAAACAAACAGA+GGG | - | chr8_2:33007593-33007612 | None:intergenic | 30.0% | |
| ACAGTATTAGAAACAAACAG+AGG | - | chr8_2:33007594-33007613 | None:intergenic | 30.0% | |
| !! | GTTTGTTTCTAATACTGTTC+TGG | + | chr8_2:33007596-33007615 | Msa1244500:CDS | 30.0% |
| !! | TTCTAATACTGTTCTGGAAA+AGG | + | chr8_2:33007602-33007621 | Msa1244500:CDS | 30.0% |
| TAAATAGTCACAGCAAAATC+AGG | - | chr8_2:33007858-33007877 | None:intergenic | 30.0% | |
| TAAATCAGATTCTCCAGATT+TGG | - | chr8_2:33007948-33007967 | None:intergenic | 30.0% | |
| TACATAACAGTTTCACTAGT+TGG | - | chr8_2:33007992-33008011 | None:intergenic | 30.0% | |
| TTACTACTCTAAGTGGATAA+GGG | + | chr8_2:33008015-33008034 | Msa1244500:CDS | 30.0% | |
| CTCTGTTATAGCAAATTTGT+TGG | + | chr8_2:33008155-33008174 | Msa1244500:intron | 30.0% | |
| GAAATAGACACTACATAAAG+TGG | - | chr8_2:33008314-33008333 | None:intergenic | 30.0% | |
| TAGTGTCTATTTCGTGATTA+TGG | + | chr8_2:33008321-33008340 | Msa1244500:intron | 30.0% | |
| CTTATTGGGTGAAATTCATT+TGG | - | chr8_2:33008353-33008372 | None:intergenic | 30.0% | |
| ACAATGCTGAATGTTAAAAG+AGG | - | chr8_2:33008423-33008442 | None:intergenic | 30.0% | |
| ACTTGTGTATAATCCATTTC+AGG | + | chr8_2:33008633-33008652 | Msa1244500:intron | 30.0% | |
| CTTGTGTATAATCCATTTCA+GGG | + | chr8_2:33008634-33008653 | Msa1244500:intron | 30.0% | |
| !! | GTGTATCTATGAAGAGTATT+TGG | + | chr8_2:33009089-33009108 | Msa1244500:CDS | 30.0% |
| TGATACAGAAAACTTGACAA+TGG | - | chr8_2:33009214-33009233 | None:intergenic | 30.0% | |
| ! | TGCTTATTTGCTAAATCCTT+GGG | - | chr8_2:33009782-33009801 | None:intergenic | 30.0% |
| TTTCTGCAAATTAGTGCAAT+AGG | - | chr8_2:33009820-33009839 | None:intergenic | 30.0% | |
| !! | CGACATTGATAATGATGATT+TGG | + | chr8_2:33009949-33009968 | Msa1244500:CDS | 30.0% |
| !! | TGATAATGATGATTTGGTTG+AGG | + | chr8_2:33009955-33009974 | Msa1244500:CDS | 30.0% |
| CATTCAGATCATACATACAT+GGG | + | chr8_2:33010048-33010067 | Msa1244500:CDS | 30.0% | |
| AAAAAAACAACGCATGTGAT+TGG | + | chr8_2:33010457-33010476 | Msa1244500:intron | 30.0% | |
| TGGACTAATCGGATTTATAT+TGG | + | chr8_2:33010477-33010496 | Msa1244500:intron | 30.0% | |
| !! | ATTTTGATATGTCTGCTCAT+TGG | + | chr8_2:33010689-33010708 | Msa1244500:intron | 30.0% |
| ATATGTTAAAGCAAGGACAA+AGG | + | chr8_2:33010788-33010807 | Msa1244500:CDS | 30.0% | |
| TATGTTAAAGCAAGGACAAA+GGG | + | chr8_2:33010789-33010808 | Msa1244500:CDS | 30.0% | |
| TTGAACAATGCTTATACCTT+CGG | - | chr8_2:33010868-33010887 | None:intergenic | 30.0% | |
| ACACTCAAGTTATTAAGAGA+CGG | - | chr8_2:33010927-33010946 | None:intergenic | 30.0% | |
| !!! | GTCTTGGTTTTGATGATTTT+TGG | - | chr8_2:33011200-33011219 | None:intergenic | 30.0% |
| ATATACCCACTATTGTTGAA+AGG | + | chr8_2:33011290-33011309 | Msa1244500:intron | 30.0% | |
| AAAGGACCAACATTAAATGA+GGG | + | chr8_2:33011308-33011327 | Msa1244500:intron | 30.0% | |
| AATTAACCATAGTATAGAGC+AGG | - | chr8_2:33011499-33011518 | None:intergenic | 30.0% | |
| AAGTTACTAGATCTTGATTG+TGG | + | chr8_2:33011663-33011682 | Msa1244500:exon | 30.0% | |
| TTGTTCAATTTCCATTCCAT+TGG | - | chr8_2:33011916-33011935 | None:intergenic | 30.0% | |
| ! | CAGTTCTCTTTTGTAACATT+TGG | - | chr8_2:33011958-33011977 | None:intergenic | 30.0% |
| CTTCTTCTTCAATTCCTCAT+CGG | + | chr8_2:33006404-33006423 | Msa1244500:intron | 35.0% | |
| ! | GGTAACATTCTGTTTCTCAT+CGG | + | chr8_2:33006425-33006444 | Msa1244500:intron | 35.0% |
| !!! | GGTTGTTTTGGTTGTTTTTG+GGG | - | chr8_2:33006520-33006539 | None:intergenic | 35.0% |
| !!! | TGTTGTGGTTTTGGTTGTTT+TGG | - | chr8_2:33006532-33006551 | None:intergenic | 35.0% |
| ! | TAACCTGATTGTTGTGGTTT+TGG | - | chr8_2:33006541-33006560 | None:intergenic | 35.0% |
| GTGAAATAACCTGATTGTTG+TGG | - | chr8_2:33006547-33006566 | None:intergenic | 35.0% | |
| AAAGAACGTGTAGGAAGATT+GGG | - | chr8_2:33006573-33006592 | None:intergenic | 35.0% | |
| TAAAGAACGTGTAGGAAGAT+TGG | - | chr8_2:33006574-33006593 | None:intergenic | 35.0% | |
| !!! | AACGGCCAAAACTTTTTTGT+AGG | + | chr8_2:33006612-33006631 | Msa1244500:intron | 35.0% |
| ! | CACCACCTACAAAAAAGTTT+TGG | - | chr8_2:33006620-33006639 | None:intergenic | 35.0% |
| !!! | CAAAACTTTTTTGTAGGTGG+TGG | + | chr8_2:33006618-33006637 | Msa1244500:intron | 35.0% |
| ! | GAAGTTTTCAGCCTTCTTAT+TGG | - | chr8_2:33006685-33006704 | None:intergenic | 35.0% |
| !! | GCTGTGTTTGACTTTTGATT+TGG | + | chr8_2:33006827-33006846 | Msa1244500:intron | 35.0% |
| TTTACAGGTTGTTGTGAATG+GGG | + | chr8_2:33006856-33006875 | Msa1244500:intron | 35.0% | |
| ! | ATCTATACTAAGGTTCGGTT+TGG | + | chr8_2:33007028-33007047 | Msa1244500:intron | 35.0% |
| !! | TAAGAAGCGTTTGAGCTTAT+AGG | + | chr8_2:33007185-33007204 | Msa1244500:intron | 35.0% |
| CTAACTGATAGCAGATAAAC+CGG | - | chr8_2:33007378-33007397 | None:intergenic | 35.0% | |
| TGTAGATTGTTCAACGAGTT+TGG | + | chr8_2:33007673-33007692 | Msa1244500:intron | 35.0% | |
| TGTATCCTTACTACTCTAAG+TGG | + | chr8_2:33008008-33008027 | Msa1244500:CDS | 35.0% | |
| CTTATCCACTTAGAGTAGTA+AGG | - | chr8_2:33008016-33008035 | None:intergenic | 35.0% | |
| CTTACTACTCTAAGTGGATA+AGG | + | chr8_2:33008014-33008033 | Msa1244500:CDS | 35.0% | |
| TACTACTCTAAGTGGATAAG+GGG | + | chr8_2:33008016-33008035 | Msa1244500:CDS | 35.0% | |
| !! | TGCCTTTGAAACTTAATCAG+TGG | + | chr8_2:33008050-33008069 | Msa1244500:CDS | 35.0% |
| ! | CACCACTGATTAAGTTTCAA+AGG | - | chr8_2:33008055-33008074 | None:intergenic | 35.0% |
| ! | AGAAAGGAAAGCATGGTTAA+AGG | - | chr8_2:33008137-33008156 | None:intergenic | 35.0% |
| ATAACAGAGAAAGGAAAGCA+TGG | - | chr8_2:33008144-33008163 | None:intergenic | 35.0% | |
| !! | TATAGCAAATTTGTTGGCTG+TGG | + | chr8_2:33008161-33008180 | Msa1244500:intron | 35.0% |
| TCTTATTGGGTGAAATCATG+TGG | + | chr8_2:33008280-33008299 | Msa1244500:intron | 35.0% | |
| CATCACCAGATGATTCATAA+AGG | - | chr8_2:33008484-33008503 | None:intergenic | 35.0% | |
| TTGGTATAAGTACCCTGAAA+TGG | - | chr8_2:33008649-33008668 | None:intergenic | 35.0% | |
| ACGACTCCTGCAATTAAAAT+TGG | - | chr8_2:33008668-33008687 | None:intergenic | 35.0% | |
| GATAGAAAATCTGTGAGTGT+GGG | - | chr8_2:33008996-33009015 | None:intergenic | 35.0% | |
| !!! | GTTTCAGGTTCTTGAGATTT+TGG | + | chr8_2:33009056-33009075 | Msa1244500:intron | 35.0% |
| ! | AGTGTTTGGAATAAATGCCT+AGG | - | chr8_2:33009277-33009296 | None:intergenic | 35.0% |
| TAGGCATTTATTCCAAACAC+TGG | + | chr8_2:33009276-33009295 | Msa1244500:intron | 35.0% | |
| !!! | TTTGCGCTTTTTCAACAGAT+TGG | + | chr8_2:33009500-33009519 | Msa1244500:intron | 35.0% |
| !!! | TTGCGCTTTTTCAACAGATT+GGG | + | chr8_2:33009501-33009520 | Msa1244500:intron | 35.0% |
| ! | ACTTGAACTGAAGCTACTTT+AGG | - | chr8_2:33009572-33009591 | None:intergenic | 35.0% |
| TGAGTATCAGCATCTTTGTA+AGG | - | chr8_2:33009611-33009630 | None:intergenic | 35.0% | |
| TACAAAGATGCTGATACTCA+AGG | + | chr8_2:33009611-33009630 | Msa1244500:CDS | 35.0% | |
| CAACAACATATTCACAGTTG+CGG | - | chr8_2:33009654-33009673 | None:intergenic | 35.0% | |
| TGGATGGAAATATTCTCAGT+GGG | + | chr8_2:33009721-33009740 | Msa1244500:CDS | 35.0% | |
| TATTCTCAGTGGGAAATGAA+AGG | + | chr8_2:33009731-33009750 | Msa1244500:CDS | 35.0% | |
| !! | AAATGAAAGGTGTTCCTCTA+AGG | + | chr8_2:33009744-33009763 | Msa1244500:intron | 35.0% |
| ! | GTTCCTCTAAGGATTGAAAT+CGG | + | chr8_2:33009755-33009774 | Msa1244500:intron | 35.0% |
| ! | TTCCTCTAAGGATTGAAATC+GGG | + | chr8_2:33009756-33009775 | Msa1244500:intron | 35.0% |
| ! | CTGCTTATTTGCTAAATCCT+TGG | - | chr8_2:33009783-33009802 | None:intergenic | 35.0% |
| CAAGGATTTAGCAAATAAGC+AGG | + | chr8_2:33009781-33009800 | Msa1244500:intron | 35.0% | |
| GCATTCAGATCATACATACA+TGG | + | chr8_2:33010047-33010066 | Msa1244500:CDS | 35.0% | |
| AAAAGATGATCTTAGCTCCT+TGG | + | chr8_2:33010098-33010117 | Msa1244500:CDS | 35.0% | |
| ATTTAACCTCAATCAGAGTG+TGG | - | chr8_2:33010254-33010273 | None:intergenic | 35.0% | |
| AAAGGGTTTACTTACCAACT+GGG | - | chr8_2:33010372-33010391 | None:intergenic | 35.0% | |
| CAGGCGTTTAGAAATAGAAA+GGG | - | chr8_2:33010389-33010408 | None:intergenic | 35.0% | |
| ACAGGCGTTTAGAAATAGAA+AGG | - | chr8_2:33010390-33010409 | None:intergenic | 35.0% | |
| !!! | TTTACGGTTTGGTGTTTTCT+TGG | + | chr8_2:33010725-33010744 | Msa1244500:intron | 35.0% |
| TTGGTTTATAATGCTTCAGG+AGG | + | chr8_2:33010758-33010777 | Msa1244500:intron | 35.0% | |
| TGAACAATGCTTATACCTTC+GGG | - | chr8_2:33010867-33010886 | None:intergenic | 35.0% | |
| ! | AGGTATAAGCATTGTTCAAG+TGG | + | chr8_2:33010869-33010888 | Msa1244500:intron | 35.0% |
| ATACCAAACATGCGCTTAAT+AGG | + | chr8_2:33011126-33011145 | Msa1244500:intron | 35.0% | |
| TTCTTATATAAAGGACCGGA+GGG | - | chr8_2:33011171-33011190 | None:intergenic | 35.0% | |
| TTTCTTATATAAAGGACCGG+AGG | - | chr8_2:33011172-33011191 | None:intergenic | 35.0% | |
| GCAACAACTAATGATTGTCT+TGG | - | chr8_2:33011216-33011235 | None:intergenic | 35.0% | |
| TTGGTCCTTTCAACAATAGT+GGG | - | chr8_2:33011298-33011317 | None:intergenic | 35.0% | |
| GAAAGGACCAACATTAAATG+AGG | + | chr8_2:33011307-33011326 | Msa1244500:intron | 35.0% | |
| TTCTAGCCCTCATTTAATGT+TGG | - | chr8_2:33011317-33011336 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | + | chr8_2:33011414-33011433 | Msa1244500:intron | 35.0% | |
| TTCTTATATATAGGACCGGA+GGG | + | chr8_2:33011415-33011434 | Msa1244500:intron | 35.0% | |
| GAGTATATTCATGCATGTGA+CGG | + | chr8_2:33011437-33011456 | Msa1244500:intron | 35.0% | |
| TATGAACCTGCTCTATACTA+TGG | + | chr8_2:33011490-33011509 | Msa1244500:intron | 35.0% | |
| GAAGCTAGTTCACCATTTAA+TGG | + | chr8_2:33011693-33011712 | Msa1244500:three_prime_UTR | 35.0% | |
| GTAATCCACAAATTCAGTGA+AGG | - | chr8_2:33011721-33011740 | None:intergenic | 35.0% | |
| GGCATAGTATTCAATTGATC+AGG | - | chr8_2:33011860-33011879 | None:intergenic | 35.0% | |
| ATAAACAAGCTGTGGTCAAA+AGG | - | chr8_2:33011881-33011900 | None:intergenic | 35.0% | |
| ! | TTATGTCGATTGAAAGCCAA+TGG | + | chr8_2:33011897-33011916 | Msa1244500:three_prime_UTR | 35.0% |
| AATTGAACAATCCAATCCTC+TGG | + | chr8_2:33011926-33011945 | Msa1244500:three_prime_UTR | 35.0% | |
| ! | AGAACTGCGTCTTTTCTTTT+TGG | + | chr8_2:33011971-33011990 | Msa1244500:three_prime_UTR | 35.0% |
| ! | ACCTTGTTGTGTTGGAAAGA+AGG | - | chr8_2:33006349-33006368 | None:intergenic | 40.0% |
| GAAACAGAATGTTACCGATG+AGG | - | chr8_2:33006421-33006440 | None:intergenic | 40.0% | |
| !!! | TTGTTTTTGGGGTTTTGCAG+CGG | - | chr8_2:33006509-33006528 | None:intergenic | 40.0% |
| CAACCAAAACCACAACAATC+AGG | + | chr8_2:33006535-33006554 | Msa1244500:CDS | 40.0% | |
| GTGGAATGTAAAGAACGTGT+AGG | - | chr8_2:33006582-33006601 | None:intergenic | 40.0% | |
| TTGGCCGTTAAATTGAAACG+TGG | - | chr8_2:33006601-33006620 | None:intergenic | 40.0% | |
| !!! | GGCCAAAACTTTTTTGTAGG+TGG | + | chr8_2:33006615-33006634 | Msa1244500:intron | 40.0% |
| ACCTTGGTCAATGGCTATTT+GGG | + | chr8_2:33006922-33006941 | Msa1244500:CDS | 40.0% | |
| GATAAACCGGCTGATATTAG+CGG | - | chr8_2:33007365-33007384 | None:intergenic | 40.0% | |
| ATCCATGTCTGACTAAGCTT+AGG | - | chr8_2:33007436-33007455 | None:intergenic | 40.0% | |
| !! | TACTGTTCTGGAAAAGGAGA+AGG | + | chr8_2:33007608-33007627 | Msa1244500:CDS | 40.0% |
| AAAGGAGAAGGACCATATCA+AGG | + | chr8_2:33007620-33007639 | Msa1244500:CDS | 40.0% | |
| AAGGAGAAGGACCATATCAA+GGG | + | chr8_2:33007621-33007640 | Msa1244500:CDS | 40.0% | |
| ATTTAAGTGACTCTCACCTC+TGG | - | chr8_2:33007654-33007673 | None:intergenic | 40.0% | |
| ! | AAATGTTTTGCCCTTTACCC+AGG | + | chr8_2:33007910-33007929 | Msa1244500:intron | 40.0% |
| CTAGTTGGACGAATAGCAAT+AGG | - | chr8_2:33007977-33007996 | None:intergenic | 40.0% | |
| AGTGGTGCAATGTTGTTAGA+TGG | + | chr8_2:33008068-33008087 | Msa1244500:CDS | 40.0% | |
| GTGGTGCAATGTTGTTAGAT+GGG | + | chr8_2:33008069-33008088 | Msa1244500:CDS | 40.0% | |
| TAATGCCTGATGAATGGTGT+GGG | - | chr8_2:33008106-33008125 | None:intergenic | 40.0% | |
| ATAATGCCTGATGAATGGTG+TGG | - | chr8_2:33008107-33008126 | None:intergenic | 40.0% | |
| TCAACACTCGCACTCTTATT+GGG | - | chr8_2:33008367-33008386 | None:intergenic | 40.0% | |
| TTCAACACTCGCACTCTTAT+TGG | - | chr8_2:33008368-33008387 | None:intergenic | 40.0% | |
| CGCTTCCTTTATGAATCATC+TGG | + | chr8_2:33008476-33008495 | Msa1244500:intron | 40.0% | |
| ! | TGGTGATGATTCCAGTGAAT+TGG | + | chr8_2:33008496-33008515 | Msa1244500:intron | 40.0% |
| TTTCTTGCAAAGCAGCTTCA+CGG | - | chr8_2:33008525-33008544 | None:intergenic | 40.0% | |
| !! | ACACACTGCTTTTGCAACAA+AGG | + | chr8_2:33008708-33008727 | Msa1244500:CDS | 40.0% |
| CACTACAAAACCACAAGAGA+AGG | - | chr8_2:33008899-33008918 | None:intergenic | 40.0% | |
| GGATAGAAAATCTGTGAGTG+TGG | - | chr8_2:33008997-33009016 | None:intergenic | 40.0% | |
| ACTTTACACTACCAGTGTTG+AGG | + | chr8_2:33009164-33009183 | Msa1244500:CDS | 40.0% | |
| TTTATTCCAAACACTGGTCG+TGG | + | chr8_2:33009282-33009301 | Msa1244500:CDS | 40.0% | |
| AGGTGCAACTTCTCATTGTT+TGG | + | chr8_2:33009311-33009330 | Msa1244500:CDS | 40.0% | |
| GGTGCAACTTCTCATTGTTT+GGG | + | chr8_2:33009312-33009331 | Msa1244500:CDS | 40.0% | |
| GCTTACAGTTCGAGTACTAT+AGG | - | chr8_2:33009418-33009437 | None:intergenic | 40.0% | |
| !!! | TGCGCTTTTTCAACAGATTG+GGG | + | chr8_2:33009502-33009521 | Msa1244500:intron | 40.0% |
| ! | TTTTCAACAGATTGGGGTGA+TGG | + | chr8_2:33009508-33009527 | Msa1244500:intron | 40.0% |
| ! | ATGGTTCATGGTGATGACAA+GGG | + | chr8_2:33009533-33009552 | Msa1244500:CDS | 40.0% |
| ! | TGAACTGAAGCTACTTTAGG+TGG | - | chr8_2:33009569-33009588 | None:intergenic | 40.0% |
| CGCAACTGTGAATATGTTGT+TGG | + | chr8_2:33009652-33009671 | Msa1244500:CDS | 40.0% | |
| GTGAATATGTTGTTGGAAGC+AGG | + | chr8_2:33009659-33009678 | Msa1244500:CDS | 40.0% | |
| CACTGAGAATATTTCCATCC+AGG | - | chr8_2:33009722-33009741 | None:intergenic | 40.0% | |
| CTGGATGGAAATATTCTCAG+TGG | + | chr8_2:33009720-33009739 | Msa1244500:CDS | 40.0% | |
| GAAAGGGTTTACTTACCAAC+TGG | - | chr8_2:33010373-33010392 | None:intergenic | 40.0% | |
| !! | TGTCTGTTGGTTTCTGTATC+AGG | + | chr8_2:33010411-33010430 | Msa1244500:intron | 40.0% |
| ACGCATGTGATTGGACTAAT+CGG | + | chr8_2:33010466-33010485 | Msa1244500:intron | 40.0% | |
| CATTCAAAGTGCAAGATGGA+AGG | - | chr8_2:33010535-33010554 | None:intergenic | 40.0% | |
| ! | GTGTCATTCAAAGTGCAAGA+TGG | - | chr8_2:33010539-33010558 | None:intergenic | 40.0% |
| GTTTATAATGCTTCAGGAGG+TGG | + | chr8_2:33010761-33010780 | Msa1244500:intron | 40.0% | |
| GAACAATGCTTATACCTTCG+GGG | - | chr8_2:33010866-33010885 | None:intergenic | 40.0% | |
| AGTTATTAAGAGACGGAGGT+AGG | - | chr8_2:33010920-33010939 | None:intergenic | 40.0% | |
| CTCAAGTTATTAAGAGACGG+AGG | - | chr8_2:33010924-33010943 | None:intergenic | 40.0% | |
| !! | TGTCTCATTTGAGTTGTGCA+TGG | + | chr8_2:33010944-33010963 | Msa1244500:intron | 40.0% |
| TTTGTGCATGCTTGGTATCA+CGG | + | chr8_2:33011071-33011090 | Msa1244500:intron | 40.0% | |
| TCTCCTATTAAGCGCATGTT+TGG | - | chr8_2:33011132-33011151 | None:intergenic | 40.0% | |
| AACATGCGCTTAATAGGAGA+CGG | + | chr8_2:33011132-33011151 | Msa1244500:intron | 40.0% | |
| GTTGGTCCTTTCAACAATAG+TGG | - | chr8_2:33011299-33011318 | None:intergenic | 40.0% | |
| ATGCATGAATATACTCCCTC+CGG | - | chr8_2:33011433-33011452 | None:intergenic | 40.0% | |
| CCTAAAAGGTCAACAACACA+AGG | - | chr8_2:33011589-33011608 | None:intergenic | 40.0% | |
| !! | CCTTGTGTTGTTGACCTTTT+AGG | + | chr8_2:33011586-33011605 | Msa1244500:intron | 40.0% |
| TGCAAAGAAGTGGTCATACT+GGG | + | chr8_2:33011636-33011655 | Msa1244500:CDS | 40.0% | |
| !! | TCAGTGAAGGCACCATTAAA+TGG | - | chr8_2:33011708-33011727 | None:intergenic | 40.0% |
| CAATCGACATAAACAAGCTG+TGG | - | chr8_2:33011889-33011908 | None:intergenic | 40.0% | |
| TCGATTGAAAGCCAATGGAA+TGG | + | chr8_2:33011902-33011921 | Msa1244500:three_prime_UTR | 40.0% | |
| !! | TAACATTTGGTGCAAACCAG+AGG | - | chr8_2:33011945-33011964 | None:intergenic | 40.0% |
| GGGTAATCTTCAGCTAGCTA+GGG | - | chr8_2:33006260-33006279 | None:intergenic | 45.0% | |
| TGGGTAATCTTCAGCTAGCT+AGG | - | chr8_2:33006261-33006280 | None:intergenic | 45.0% | |
| CTCACTCTGTGTGTTGTGTT+GGG | - | chr8_2:33006280-33006299 | None:intergenic | 45.0% | |
| ACTCACTCTGTGTGTTGTGT+TGG | - | chr8_2:33006281-33006300 | None:intergenic | 45.0% | |
| ACAGAGTGAGTCTCCTCTTA+CGG | + | chr8_2:33006290-33006309 | Msa1244500:five_prime_UTR | 45.0% | |
| GCCTTCTTTCCAACACAACA+AGG | + | chr8_2:33006345-33006364 | Msa1244500:five_prime_UTR | 45.0% | |
| !! | ACGGTGTTACCTTGTTGTGT+TGG | - | chr8_2:33006357-33006376 | None:intergenic | 45.0% |
| !! | TGTAGGTGGTGGAAAGAAGA+AGG | + | chr8_2:33006629-33006648 | Msa1244500:intron | 45.0% |
| AGGCTGAAAACTTCGGAGAA+TGG | + | chr8_2:33006691-33006710 | Msa1244500:CDS | 45.0% | |
| GTTGCTACATTCTCAGACCT+TGG | + | chr8_2:33006906-33006925 | Msa1244500:CDS | 45.0% | |
| CATTCTCAGACCTTGGTCAA+TGG | + | chr8_2:33006913-33006932 | Msa1244500:CDS | 45.0% | |
| GACCTTGGTCAATGGCTATT+TGG | + | chr8_2:33006921-33006940 | Msa1244500:CDS | 45.0% | |
| TCCCAAATAGCCATTGACCA+AGG | - | chr8_2:33006926-33006945 | None:intergenic | 45.0% | |
| TGCACCGTAAGCTCGAAAAT+TGG | - | chr8_2:33007059-33007078 | None:intergenic | 45.0% | |
| GTTCAACCGCTAATATCAGC+CGG | + | chr8_2:33007356-33007375 | Msa1244500:intron | 45.0% | |
| AGCCTAAGCTTAGTCAGACA+TGG | + | chr8_2:33007431-33007450 | Msa1244500:intron | 45.0% | |
| CTGGAGCAAAACCCTTGATA+TGG | - | chr8_2:33007635-33007654 | None:intergenic | 45.0% | |
| ! | TATCAAGGGTTTTGCTCCAG+AGG | + | chr8_2:33007635-33007654 | Msa1244500:CDS | 45.0% |
| ACCAATCAGCATGACATGCA+GGG | - | chr8_2:33007728-33007747 | None:intergenic | 45.0% | |
| AACCAATCAGCATGACATGC+AGG | - | chr8_2:33007729-33007748 | None:intergenic | 45.0% | |
| ATGCTGCTGATAGAAGGACT+AGG | - | chr8_2:33007780-33007799 | None:intergenic | 45.0% | |
| CATAGCATGCTGCTGATAGA+AGG | - | chr8_2:33007786-33007805 | None:intergenic | 45.0% | |
| ! | AAGGAAGCGTGCAGAATTCA+AGG | - | chr8_2:33008465-33008484 | None:intergenic | 45.0% |
| CGTGAGTTTCTTTGGCAAGA+AGG | + | chr8_2:33008685-33008704 | Msa1244500:CDS | 45.0% | |
| !! | CACTGCTTTTGCAACAAAGG+AGG | + | chr8_2:33008711-33008730 | Msa1244500:CDS | 45.0% |
| AAAGGAGGAAGCAGATACAG+AGG | + | chr8_2:33008726-33008745 | Msa1244500:CDS | 45.0% | |
| TGTGTGTGTACCTTCTCTTG+TGG | + | chr8_2:33008886-33008905 | Msa1244500:intron | 45.0% | |
| AGAAAATCTGTGAGTGTGGG+TGG | - | chr8_2:33008993-33009012 | None:intergenic | 45.0% | |
| TTTGGCAGTTCCTGTCGTAA+AGG | + | chr8_2:33009107-33009126 | Msa1244500:CDS | 45.0% | |
| TTGGCAGTTCCTGTCGTAAA+GGG | + | chr8_2:33009108-33009127 | Msa1244500:CDS | 45.0% | |
| ! | CTTTTCTTGCCCTTTACGAC+AGG | - | chr8_2:33009120-33009139 | None:intergenic | 45.0% |
| AGTGAGCTTGAGAAGTTTGC+TGG | + | chr8_2:33009138-33009157 | Msa1244500:CDS | 45.0% | |
| TGTATTCCACGACCAGTGTT+TGG | - | chr8_2:33009291-33009310 | None:intergenic | 45.0% | |
| AACACTGGTCGTGGAATACA+AGG | + | chr8_2:33009291-33009310 | Msa1244500:CDS | 45.0% | |
| TGAGAAGGGAGAGAAAGCAA+TGG | + | chr8_2:33009374-33009393 | Msa1244500:CDS | 45.0% | |
| AATGGTCTGGCAGAACTCAT+GGG | + | chr8_2:33009392-33009411 | Msa1244500:CDS | 45.0% | |
| ! | GATGGTTCATGGTGATGACA+AGG | + | chr8_2:33009532-33009551 | Msa1244500:CDS | 45.0% |
| ! | TCATGGTGATGACAAGGGAT+TGG | + | chr8_2:33009538-33009557 | Msa1244500:CDS | 45.0% |
| TCAGCATCTTTGTAAGGCAC+AGG | - | chr8_2:33009605-33009624 | None:intergenic | 45.0% | |
| CATATTCACAGTTGCGGTAC+AGG | - | chr8_2:33009648-33009667 | None:intergenic | 45.0% | |
| TCCAGGAGAATAGTTGTCTC+TGG | - | chr8_2:33009705-33009724 | None:intergenic | 45.0% | |
| GAGACAACTATTCTCCTGGA+TGG | + | chr8_2:33009705-33009724 | Msa1244500:CDS | 45.0% | |
| AGAGTGTGGCACGATTATAC+AGG | - | chr8_2:33010240-33010259 | None:intergenic | 45.0% | |
| TCAAAACTGTCCTTCCCAGT+TGG | + | chr8_2:33010355-33010374 | Msa1244500:intron | 45.0% | |
| GGTTTACTTACCAACTGGGA+AGG | - | chr8_2:33010368-33010387 | None:intergenic | 45.0% | |
| ACAGAAACCAACAGACAGAC+AGG | - | chr8_2:33010408-33010427 | None:intergenic | 45.0% | |
| TGAGACACTTTGTGCATGCT+TGG | + | chr8_2:33011063-33011082 | Msa1244500:intron | 45.0% | |
| ! | AAAAGCACACGGTGCCTAAA+AGG | - | chr8_2:33011603-33011622 | None:intergenic | 45.0% |
| CAGTATGACCACTTCTTTGC+AGG | - | chr8_2:33011637-33011656 | None:intergenic | 45.0% | |
| CTGCAAAGAAGTGGTCATAC+TGG | + | chr8_2:33011635-33011654 | Msa1244500:CDS | 45.0% | |
| GCAAAGAAGTGGTCATACTG+GGG | + | chr8_2:33011637-33011656 | Msa1244500:CDS | 45.0% | |
| TGGTGCCTTCACTGAATTTG+TGG | + | chr8_2:33011713-33011732 | Msa1244500:three_prime_UTR | 45.0% | |
| ! | TTTGGTGCAAACCAGAGGAT+TGG | - | chr8_2:33011940-33011959 | None:intergenic | 45.0% |
| !!! | AAAATTTTCAAAAAAATTTT+TGG | - | chr8_2:33011397-33011416 | None:intergenic | 5.0% |
| AATGGAACGTGCAAGAGCGA+TGG | - | chr8_2:33006318-33006337 | None:intergenic | 50.0% | |
| GGAAAGAAGGCGAGAGAGAA+TGG | - | chr8_2:33006336-33006355 | None:intergenic | 50.0% | |
| GTGCTCGTCATCCTTCACAA+TGG | + | chr8_2:33006453-33006472 | Msa1244500:CDS | 50.0% | |
| CTCGTCATCCTTCACAATGG+CGG | + | chr8_2:33006456-33006475 | Msa1244500:CDS | 50.0% | |
| TCGTCATCCTTCACAATGGC+GGG | + | chr8_2:33006457-33006476 | Msa1244500:CDS | 50.0% | |
| CTTCGGAGAATGGTATTCCG+AGG | + | chr8_2:33006701-33006720 | Msa1244500:CDS | 50.0% | |
| TCCCTGCATGTCATGCTGAT+TGG | + | chr8_2:33007724-33007743 | Msa1244500:intron | 50.0% | |
| CTATCAGCAGCATGCTATGC+TGG | + | chr8_2:33007787-33007806 | Msa1244500:intron | 50.0% | |
| GCATGCTATGCTGGATGATC+TGG | + | chr8_2:33007796-33007815 | Msa1244500:intron | 50.0% | |
| ACCCAAGCAACCTGGGTAAA+GGG | - | chr8_2:33007923-33007942 | None:intergenic | 50.0% | |
| TTTGGTCACCCAAGCAACCT+GGG | - | chr8_2:33007930-33007949 | None:intergenic | 50.0% | |
| ATTTGGTCACCCAAGCAACC+TGG | - | chr8_2:33007931-33007950 | None:intergenic | 50.0% | |
| GTTGCTTGGGTGACCAAATC+TGG | + | chr8_2:33007932-33007951 | Msa1244500:CDS | 50.0% | |
| GCAATCCCACACCATTCATC+AGG | + | chr8_2:33008098-33008117 | Msa1244500:intron | 50.0% | |
| CTTCACGGAGACCAATTCAC+TGG | - | chr8_2:33008510-33008529 | None:intergenic | 50.0% | |
| GCAGGAGTCGTGAGTTTCTT+TGG | + | chr8_2:33008677-33008696 | Msa1244500:intron | 50.0% | |
| ACGCATGCACATGAAGCAGA+GGG | - | chr8_2:33008943-33008962 | None:intergenic | 50.0% | |
| AACGCATGCACATGAAGCAG+AGG | - | chr8_2:33008944-33008963 | None:intergenic | 50.0% | |
| !! | GAGCTTGAGAAGTTTGCTGG+TGG | + | chr8_2:33009141-33009160 | Msa1244500:CDS | 50.0% |
| TCAGACACACACCTCAACAC+TGG | - | chr8_2:33009178-33009197 | None:intergenic | 50.0% | |
| AGGGAGAGAAAGCAATGGTC+TGG | + | chr8_2:33009379-33009398 | Msa1244500:CDS | 50.0% | |
| CAATGGTCTGGCAGAACTCA+TGG | + | chr8_2:33009391-33009410 | Msa1244500:CDS | 50.0% | |
| ! | ACAGATTGGGGTGATGGTGA+TGG | + | chr8_2:33009514-33009533 | Msa1244500:intron | 50.0% |
| GTTGTCTCTGGCATCTGACT+CGG | - | chr8_2:33009693-33009712 | None:intergenic | 50.0% | |
| GCCAGAGACAACTATTCTCC+TGG | + | chr8_2:33009701-33009720 | Msa1244500:CDS | 50.0% | |
| GGCCCGATTTCAATCCTTAG+AGG | - | chr8_2:33009761-33009780 | None:intergenic | 50.0% | |
| AAGGATTGAAATCGGGCCCA+AGG | + | chr8_2:33009763-33009782 | Msa1244500:intron | 50.0% | |
| CACTATCACGACGAACAGCA+CGG | - | chr8_2:33009919-33009938 | None:intergenic | 50.0% | |
| ATCGTGCCACACTCTGATTG+AGG | + | chr8_2:33010245-33010264 | Msa1244500:intron | 50.0% | |
| CTAAACGCCTGTCTGTCTGT+TGG | + | chr8_2:33010398-33010417 | Msa1244500:intron | 50.0% | |
| ! | GGGAGTTCTGGCTGATCAAA+GGG | - | chr8_2:33010846-33010865 | None:intergenic | 50.0% |
| CTTATACCTTCGGGGAGTTC+TGG | - | chr8_2:33010858-33010877 | None:intergenic | 50.0% | |
| GGATACAGTAGTACTCCCTC+CGG | + | chr8_2:33011153-33011172 | Msa1244500:intron | 50.0% | |
| ! | CTTGCCTGACGAAAAGCACA+CGG | - | chr8_2:33011614-33011633 | None:intergenic | 50.0% |
| !! | AAGAGCGATGGTGCCGTAAG+AGG | - | chr8_2:33006306-33006325 | None:intergenic | 55.0% |
| CGTCATCCTTCACAATGGCG+GGG | + | chr8_2:33006458-33006477 | Msa1244500:CDS | 55.0% | |
| TGCCCTTTACCCAGGTTGCT+TGG | + | chr8_2:33007918-33007937 | Msa1244500:intron | 55.0% | |
| GCCCTTTACCCAGGTTGCTT+GGG | + | chr8_2:33007919-33007938 | Msa1244500:intron | 55.0% | |
| CACCCAAGCAACCTGGGTAA+AGG | - | chr8_2:33007924-33007943 | None:intergenic | 55.0% | |
| CGCATGCACATGAAGCAGAG+GGG | - | chr8_2:33008942-33008961 | None:intergenic | 55.0% | |
| !! | GGGGTGATGGTGATGGTTCA+TGG | + | chr8_2:33009521-33009540 | Msa1244500:CDS | 55.0% |
| ! | CGTGCTGTTCGTCGTGATAG+TGG | + | chr8_2:33009917-33009936 | Msa1244500:CDS | 55.0% |
| ! | CTTAGCTCCTTGGTGTGACG+AGG | + | chr8_2:33010108-33010127 | Msa1244500:CDS | 55.0% |
| CATACCTCCTCGTCACACCA+AGG | - | chr8_2:33010118-33010137 | None:intergenic | 55.0% | |
| GCAAGGACAAAGGGTGAGAC+AGG | + | chr8_2:33010798-33010817 | Msa1244500:CDS | 55.0% | |
| ! | GGGGAGTTCTGGCTGATCAA+AGG | - | chr8_2:33010847-33010866 | None:intergenic | 55.0% |
| GTGCATGCTTGGTATCACGG+TGG | + | chr8_2:33011074-33011093 | Msa1244500:intron | 55.0% | |
| CATGCTTGGTATCACGGTGG+AGG | + | chr8_2:33011077-33011096 | Msa1244500:intron | 55.0% | |
| CAGGCAAGCCTGCAAAGAAG+TGG | + | chr8_2:33011626-33011645 | Msa1244500:CDS | 55.0% | |
| ATCGGTCCCCGCCATTGTGA+AGG | - | chr8_2:33006467-33006486 | None:intergenic | 60.0% | |
| ! | AGCTCCTTGGTGTGACGAGG+AGG | + | chr8_2:33010111-33010130 | Msa1244500:CDS | 60.0% |
| GATCAGCCAGAACTCCCCGA+AGG | + | chr8_2:33010849-33010868 | Msa1244500:CDS | 60.0% | |
| ! | GGCACCGTGTGCTTTTCGTC+AGG | + | chr8_2:33011607-33011626 | Msa1244500:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 33006244 | 33012025 | 33006244 | ID=Msa1244500;Name=Msa1244500 |
| chr8_2 | mRNA | 33006244 | 33012025 | 33006244 | ID=Msa1244500-mRNA-1;Parent=Msa1244500;Name=Msa1244500-mRNA-1;_AED=0.14;_eAED=0.14;_QI=127|0.83|0.84|1|0.83|0.76|13|353|507 |
| chr8_2 | exon | 33006244 | 33006366 | 33006244 | ID=Msa1244500-mRNA-1:exon:10706;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33006447 | 33006556 | 33006447 | ID=Msa1244500-mRNA-1:exon:10707;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33006634 | 33006722 | 33006634 | ID=Msa1244500-mRNA-1:exon:10708;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33006863 | 33006955 | 33006863 | ID=Msa1244500-mRNA-1:exon:10709;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33007540 | 33007656 | 33007540 | ID=Msa1244500-mRNA-1:exon:10710;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33007932 | 33008092 | 33007932 | ID=Msa1244500-mRNA-1:exon:10711;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33008681 | 33008747 | 33008681 | ID=Msa1244500-mRNA-1:exon:10712;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33009063 | 33009185 | 33009063 | ID=Msa1244500-mRNA-1:exon:10713;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33009279 | 33009431 | 33009279 | ID=Msa1244500-mRNA-1:exon:10714;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33009518 | 33009754 | 33009518 | ID=Msa1244500-mRNA-1:exon:10715;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33009914 | 33010132 | 33009914 | ID=Msa1244500-mRNA-1:exon:10716;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33010777 | 33010870 | 33010777 | ID=Msa1244500-mRNA-1:exon:10717;Parent=Msa1244500-mRNA-1 |
| chr8_2 | exon | 33011608 | 33012025 | 33011608 | ID=Msa1244500-mRNA-1:exon:10718;Parent=Msa1244500-mRNA-1 |
| chr8_2 | five_prime_UTR | 33006244 | 33006366 | 33006244 | ID=Msa1244500-mRNA-1:five_prime_utr;Parent=Msa1244500-mRNA-1 |
| chr8_2 | five_prime_UTR | 33006447 | 33006450 | 33006447 | ID=Msa1244500-mRNA-1:five_prime_utr;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33006451 | 33006556 | 33006451 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33006634 | 33006722 | 33006634 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33006863 | 33006955 | 33006863 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33007540 | 33007656 | 33007540 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33007932 | 33008092 | 33007932 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33008681 | 33008747 | 33008681 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33009063 | 33009185 | 33009063 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33009279 | 33009431 | 33009279 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33009518 | 33009754 | 33009518 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33009914 | 33010132 | 33009914 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33010777 | 33010870 | 33010777 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | CDS | 33011608 | 33011672 | 33011608 | ID=Msa1244500-mRNA-1:cds;Parent=Msa1244500-mRNA-1 |
| chr8_2 | three_prime_UTR | 33011673 | 33012025 | 33011673 | ID=Msa1244500-mRNA-1:three_prime_utr;Parent=Msa1244500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
