Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295160 | XP_003629389.1 | 99.096 | 332 | 3 | 0 | 1 | 332 | 1 | 332 | 0.0 | 684 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295160 | sp|Q9FJZ9|PER72_ARATH | 76.276 | 333 | 76 | 2 | 1 | 330 | 1 | 333 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295160 | G7LDV0 | 99.096 | 332 | 3 | 0 | 1 | 332 | 1 | 332 | 0.0 | 684 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011040 | Msa1295160 | 0.810264 | 1.256971e-50 | -8.615850e-47 |
| Msa0012380 | Msa1295160 | -0.804543 | 2.053597e-49 | -8.615850e-47 |
| Msa0013270 | Msa1295160 | 0.822153 | 2.758061e-53 | -8.615850e-47 |
| Msa0024650 | Msa1295160 | 0.809447 | 1.883887e-50 | -8.615850e-47 |
| Msa0045810 | Msa1295160 | 0.801994 | 6.924042e-49 | -8.615850e-47 |
| Msa0049310 | Msa1295160 | 0.982715 | 8.240510e-156 | -8.615850e-47 |
| Msa0054050 | Msa1295160 | 0.806787 | 6.941176e-50 | -8.615850e-47 |
| Msa0062190 | Msa1295160 | 0.801954 | 7.057526e-49 | -8.615850e-47 |
| Msa0063540 | Msa1295160 | 0.806142 | 9.494724e-50 | -8.615850e-47 |
| Msa0081120 | Msa1295160 | -0.805870 | 1.083398e-49 | -8.615850e-47 |
| Msa0106540 | Msa1295160 | 0.813326 | 2.709253e-51 | -8.615850e-47 |
| Msa0608780 | Msa1295160 | -0.800476 | 1.416026e-48 | -8.615850e-47 |
| Msa0716700 | Msa1295160 | 0.818499 | 1.898838e-52 | -8.615850e-47 |
| Msa0733560 | Msa1295160 | 0.816054 | 6.739344e-52 | -8.615850e-47 |
| Msa0739720 | Msa1295160 | 0.810827 | 9.499967e-51 | -8.615850e-47 |
| Msa0742090 | Msa1295160 | -0.802246 | 6.145349e-49 | -8.615850e-47 |
| Msa0772420 | Msa1295160 | 0.812604 | 3.899540e-51 | -8.615850e-47 |
| Msa0774660 | Msa1295160 | 0.850091 | 2.123942e-60 | -8.615850e-47 |
| Msa0799170 | Msa1295160 | 0.819326 | 1.231961e-52 | -8.615850e-47 |
| Msa0804170 | Msa1295160 | 0.813611 | 2.344643e-51 | -8.615850e-47 |
| Msa0812220 | Msa1295160 | 0.829816 | 4.166230e-55 | -8.615850e-47 |
| Msa0823310 | Msa1295160 | -0.840591 | 7.927487e-58 | -8.615850e-47 |
| Msa0837610 | Msa1295160 | 0.809702 | 1.660526e-50 | -8.615850e-47 |
| Msa0125600 | Msa1295160 | 0.816656 | 4.941839e-52 | -8.615850e-47 |
| Msa0136090 | Msa1295160 | 0.806169 | 9.371204e-50 | -8.615850e-47 |
| Msa0148670 | Msa1295160 | 0.809177 | 2.152326e-50 | -8.615850e-47 |
| Msa0163690 | Msa1295160 | 0.807573 | 4.732518e-50 | -8.615850e-47 |
| Msa0206370 | Msa1295160 | 0.828018 | 1.134940e-54 | -8.615850e-47 |
| Msa0220090 | Msa1295160 | 0.817462 | 3.257304e-52 | -8.615850e-47 |
| Msa1242490 | Msa1295160 | 0.823260 | 1.524029e-53 | -8.615850e-47 |
| Msa1255710 | Msa1295160 | 0.834752 | 2.498741e-56 | -8.615850e-47 |
| Msa1273320 | Msa1295160 | 0.811945 | 5.429965e-51 | -8.615850e-47 |
| Msa1281780 | Msa1295160 | 0.835246 | 1.876241e-56 | -8.615850e-47 |
| Msa1295160 | Msa1295470 | -0.800109 | 1.681398e-48 | -8.615850e-47 |
| Msa1295160 | Msa1317240 | -0.802248 | 6.139598e-49 | -8.615850e-47 |
| Msa1295160 | Msa1321010 | 0.814094 | 1.835537e-51 | -8.615850e-47 |
| Msa1295160 | Msa1359890 | -0.818231 | 2.183060e-52 | -8.615850e-47 |
| Msa1295160 | Msa1364190 | 0.823321 | 1.475404e-53 | -8.615850e-47 |
| Msa1295160 | Msa1368420 | 0.830197 | 3.362413e-55 | -8.615850e-47 |
| Msa1295160 | Msa1378950 | 0.800488 | 1.407670e-48 | -8.615850e-47 |
| Msa1295160 | Msa1379270 | -0.800628 | 1.318421e-48 | -8.615850e-47 |
| Msa1295160 | Msa1383220 | 0.830251 | 3.262821e-55 | -8.615850e-47 |
| Msa1295160 | Msa1387480 | 0.827037 | 1.951158e-54 | -8.615850e-47 |
| Msa1295160 | Msa1405830 | 0.815343 | 9.705971e-52 | -8.615850e-47 |
| Msa1295160 | Msa1407810 | 0.811972 | 5.357937e-51 | -8.615850e-47 |
| Msa1295160 | Msa1413020 | 0.809265 | 2.060912e-50 | -8.615850e-47 |
| Msa1295160 | Msa1417220 | 0.826248 | 3.010986e-54 | -8.615850e-47 |
| Msa1295160 | Msa1437780 | 0.813923 | 2.001847e-51 | -8.615850e-47 |
| Msa1295160 | Msa1441450 | 0.825163 | 5.446423e-54 | -8.615850e-47 |
| Msa1295160 | Msa1452560 | -0.807514 | 4.869469e-50 | -8.615850e-47 |
| Msa1295160 | Msa1455940 | 0.984743 | 1.861795e-161 | -8.615850e-47 |
| Msa1295160 | Msa1461660 | 0.816088 | 6.623257e-52 | -8.615850e-47 |
| Msa0379480 | Msa1295160 | 0.802173 | 6.361500e-49 | -8.615850e-47 |
| Msa0386910 | Msa1295160 | 0.829799 | 4.205876e-55 | -8.615850e-47 |
| Msa0396860 | Msa1295160 | 0.816037 | 6.797662e-52 | -8.615850e-47 |
| Msa0471130 | Msa1295160 | -0.800871 | 1.176109e-48 | -8.615850e-47 |
| Msa1029820 | Msa1295160 | 0.807554 | 4.776701e-50 | -8.615850e-47 |
| Msa1029860 | Msa1295160 | 0.824386 | 8.300158e-54 | -8.615850e-47 |
| Msa1066150 | Msa1295160 | 0.812278 | 4.594662e-51 | -8.615850e-47 |
| Msa1068730 | Msa1295160 | 0.840862 | 6.732697e-58 | -8.615850e-47 |
| Msa1068940 | Msa1295160 | 0.804584 | 2.013568e-49 | -8.615850e-47 |
| Msa1076280 | Msa1295160 | 0.802505 | 5.434979e-49 | -8.615850e-47 |
| Msa1088470 | Msa1295160 | 0.813103 | 3.032638e-51 | -8.615850e-47 |
| Msa1089300 | Msa1295160 | 0.820063 | 8.361098e-53 | -8.615850e-47 |
| Msa1103450 | Msa1295160 | 0.800545 | 1.370539e-48 | -8.615850e-47 |
| Msa0244310 | Msa1295160 | 0.802945 | 4.409852e-49 | -8.615850e-47 |
| Msa0261400 | Msa1295160 | 0.808410 | 3.140119e-50 | -8.615850e-47 |
| Msa0269240 | Msa1295160 | 0.824227 | 9.046038e-54 | -8.615850e-47 |
| Msa0282830 | Msa1295160 | 0.805777 | 1.133371e-49 | -8.615850e-47 |
| Msa0299030 | Msa1295160 | 0.827381 | 1.614535e-54 | -8.615850e-47 |
| Msa0336460 | Msa1295160 | 0.812352 | 4.425947e-51 | -8.615850e-47 |
| Msa0336520 | Msa1295160 | 0.806689 | 7.282798e-50 | -8.615850e-47 |
| Msa0354600 | Msa1295160 | 0.809919 | 1.491434e-50 | -8.615850e-47 |
| Msa0354840 | Msa1295160 | 0.801679 | 8.037225e-49 | -8.615850e-47 |
| Msa1108560 | Msa1295160 | 0.803293 | 3.736392e-49 | -8.615850e-47 |
| Msa1111510 | Msa1295160 | 0.821162 | 4.673771e-53 | -8.615850e-47 |
| Msa1120960 | Msa1295160 | 0.825284 | 5.099032e-54 | -8.615850e-47 |
| Msa1147010 | Msa1295160 | 0.800714 | 1.266148e-48 | -8.615850e-47 |
| Msa1156710 | Msa1295160 | 0.804277 | 2.333326e-49 | -8.615850e-47 |
| Msa1156740 | Msa1295160 | 0.802116 | 6.534940e-49 | -8.615850e-47 |
| Msa0523720 | Msa1295160 | 0.847627 | 1.026123e-59 | -8.615850e-47 |
| Msa0565700 | Msa1295160 | 0.809379 | 1.948460e-50 | -8.615850e-47 |
| Msa0567330 | Msa1295160 | 0.807354 | 5.267488e-50 | -8.615850e-47 |
| Msa0567570 | Msa1295160 | 0.811875 | 5.624987e-51 | -8.615850e-47 |
| Msa0576320 | Msa1295160 | 0.806283 | 8.868655e-50 | -8.615850e-47 |
| Msa0583390 | Msa1295160 | 0.800908 | 1.155956e-48 | -8.615850e-47 |
| Msa0880910 | Msa1295160 | 0.808826 | 2.559470e-50 | -8.615850e-47 |
| Msa0967780 | Msa1295160 | 0.808663 | 2.772716e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295160 | MtrunA17_Chr8g0372601 | 99.096 | 332 | 3 | 0 | 1 | 332 | 1 | 332 | 0.0 | 684 |
| Msa1295160 | MtrunA17_Chr5g0404721 | 81.515 | 330 | 61 | 0 | 1 | 330 | 1 | 330 | 0.0 | 554 |
| Msa1295160 | MtrunA17_Chr1g0155611 | 62.914 | 302 | 111 | 1 | 30 | 330 | 46 | 347 | 1.92e-133 | 383 |
| Msa1295160 | MtrunA17_Chr5g0400331 | 55.660 | 318 | 127 | 5 | 23 | 330 | 18 | 331 | 6.58e-117 | 341 |
| Msa1295160 | MtrunA17_Chr3g0114451 | 56.146 | 301 | 124 | 2 | 30 | 330 | 26 | 318 | 2.86e-110 | 323 |
| Msa1295160 | MtrunA17_Chr7g0258811 | 48.936 | 329 | 162 | 3 | 4 | 330 | 47 | 371 | 6.65e-109 | 322 |
| Msa1295160 | MtrunA17_Chr2g0320071 | 48.788 | 330 | 156 | 3 | 1 | 330 | 1 | 317 | 6.75e-109 | 320 |
| Msa1295160 | MtrunA17_Chr4g0013171 | 51.205 | 332 | 149 | 5 | 1 | 330 | 1 | 321 | 9.38e-109 | 320 |
| Msa1295160 | MtrunA17_Chr2g0320031 | 47.576 | 330 | 162 | 2 | 1 | 330 | 1 | 319 | 1.74e-108 | 319 |
| Msa1295160 | MtrunA17_Chr2g0299691 | 52.564 | 312 | 142 | 2 | 24 | 331 | 50 | 359 | 2.05e-108 | 320 |
| Msa1295160 | MtrunA17_Chr2g0292241 | 49.836 | 305 | 152 | 1 | 28 | 331 | 27 | 331 | 2.95e-107 | 317 |
| Msa1295160 | MtrunA17_Chr2g0320061 | 48.428 | 318 | 157 | 1 | 13 | 330 | 8 | 318 | 3.30e-107 | 315 |
| Msa1295160 | MtrunA17_Chr2g0292181 | 49.835 | 303 | 151 | 1 | 30 | 331 | 38 | 340 | 4.76e-107 | 317 |
| Msa1295160 | MtrunA17_Chr2g0292251 | 50.165 | 303 | 150 | 1 | 30 | 331 | 28 | 330 | 7.36e-107 | 316 |
| Msa1295160 | MtrunA17_Chr4g0068621 | 50.164 | 305 | 148 | 2 | 27 | 330 | 35 | 336 | 1.34e-106 | 315 |
| Msa1295160 | MtrunA17_Chr2g0292091 | 48.137 | 322 | 165 | 2 | 11 | 330 | 4 | 325 | 2.26e-106 | 314 |
| Msa1295160 | MtrunA17_Chr3g0106921 | 51.316 | 304 | 137 | 4 | 30 | 330 | 25 | 320 | 3.48e-106 | 313 |
| Msa1295160 | MtrunA17_Chr2g0320051 | 50.166 | 301 | 143 | 1 | 30 | 330 | 25 | 318 | 9.27e-106 | 312 |
| Msa1295160 | MtrunA17_Chr7g0244461 | 49.363 | 314 | 150 | 3 | 18 | 330 | 7 | 312 | 9.87e-106 | 311 |
| Msa1295160 | MtrunA17_Chr4g0013181 | 54.515 | 299 | 126 | 4 | 34 | 330 | 63 | 353 | 1.17e-105 | 313 |
| Msa1295160 | MtrunA17_Chr2g0291751 | 48.466 | 326 | 163 | 3 | 6 | 330 | 9 | 330 | 1.27e-105 | 313 |
| Msa1295160 | MtrunA17_Chr2g0292211 | 46.526 | 331 | 171 | 2 | 2 | 331 | 17 | 342 | 1.46e-105 | 313 |
| Msa1295160 | MtrunA17_Chr2g0320101 | 49.057 | 318 | 154 | 2 | 13 | 330 | 8 | 317 | 1.69e-105 | 311 |
| Msa1295160 | MtrunA17_Chr5g0438021 | 52.145 | 303 | 135 | 3 | 30 | 330 | 31 | 325 | 2.27e-105 | 311 |
| Msa1295160 | MtrunA17_Chr1g0175561 | 50.645 | 310 | 144 | 3 | 30 | 330 | 17 | 326 | 4.13e-105 | 310 |
| Msa1295160 | MtrunA17_Chr2g0292101 | 47.812 | 320 | 165 | 2 | 13 | 330 | 7 | 326 | 6.12e-105 | 311 |
| Msa1295160 | MtrunA17_Chr4g0043391 | 47.416 | 329 | 156 | 4 | 5 | 330 | 10 | 324 | 1.31e-104 | 309 |
| Msa1295160 | MtrunA17_Chr2g0292111 | 49.342 | 304 | 153 | 1 | 28 | 330 | 27 | 330 | 2.71e-104 | 310 |
| Msa1295160 | MtrunA17_Chr2g0292291 | 48.318 | 327 | 160 | 3 | 14 | 331 | 7 | 333 | 1.17e-103 | 308 |
| Msa1295160 | MtrunA17_Chr3g0129051 | 48.589 | 319 | 154 | 3 | 11 | 327 | 9 | 319 | 4.46e-103 | 305 |
| Msa1295160 | MtrunA17_Chr2g0292151 | 47.706 | 327 | 164 | 2 | 11 | 330 | 4 | 330 | 5.23e-103 | 306 |
| Msa1295160 | MtrunA17_Chr4g0038171 | 47.273 | 330 | 157 | 4 | 4 | 330 | 6 | 321 | 6.67e-103 | 305 |
| Msa1295160 | MtrunA17_Chr2g0292271 | 49.669 | 302 | 151 | 1 | 30 | 330 | 29 | 330 | 1.29e-102 | 305 |
| Msa1295160 | MtrunA17_Chr4g0070951 | 50.318 | 314 | 151 | 2 | 21 | 331 | 19 | 330 | 1.40e-102 | 304 |
| Msa1295160 | MtrunA17_Chr2g0320091 | 50.000 | 302 | 142 | 3 | 30 | 330 | 25 | 318 | 8.71e-102 | 302 |
| Msa1295160 | MtrunA17_Chr5g0432351 | 51.803 | 305 | 135 | 5 | 30 | 330 | 25 | 321 | 2.10e-101 | 301 |
| Msa1295160 | MtrunA17_Chr5g0432441 | 51.140 | 307 | 138 | 4 | 28 | 330 | 28 | 326 | 1.21e-100 | 299 |
| Msa1295160 | MtrunA17_Chr4g0038151 | 46.951 | 328 | 157 | 5 | 6 | 330 | 8 | 321 | 1.61e-100 | 298 |
| Msa1295160 | MtrunA17_Chr3g0129061 | 50.000 | 322 | 151 | 3 | 11 | 330 | 9 | 322 | 2.93e-100 | 298 |
| Msa1295160 | MtrunA17_Chr2g0292261 | 50.336 | 298 | 147 | 1 | 34 | 330 | 33 | 330 | 3.69e-100 | 299 |
| Msa1295160 | MtrunA17_Chr5g0432341 | 51.475 | 305 | 136 | 5 | 30 | 330 | 25 | 321 | 4.20e-100 | 298 |
| Msa1295160 | MtrunA17_Chr3g0129041 | 50.311 | 322 | 150 | 3 | 11 | 330 | 9 | 322 | 7.03e-99 | 295 |
| Msa1295160 | MtrunA17_Chr4g0038161 | 46.951 | 328 | 156 | 5 | 6 | 330 | 8 | 320 | 1.04e-98 | 294 |
| Msa1295160 | MtrunA17_Chr4g0013821 | 47.508 | 301 | 154 | 3 | 30 | 330 | 28 | 324 | 3.30e-98 | 293 |
| Msa1295160 | MtrunA17_Chr5g0402571 | 47.734 | 331 | 164 | 5 | 1 | 330 | 4 | 326 | 6.18e-98 | 292 |
| Msa1295160 | MtrunA17_Chr5g0432331 | 50.820 | 305 | 138 | 5 | 30 | 330 | 56 | 352 | 9.71e-98 | 293 |
| Msa1295160 | MtrunA17_Chr7g0224371 | 48.852 | 305 | 147 | 3 | 26 | 330 | 27 | 322 | 2.60e-97 | 290 |
| Msa1295160 | MtrunA17_Chr5g0402581 | 46.526 | 331 | 168 | 4 | 1 | 330 | 4 | 326 | 1.23e-96 | 289 |
| Msa1295160 | MtrunA17_Chr7g0244451 | 47.923 | 313 | 152 | 5 | 19 | 330 | 14 | 316 | 2.10e-96 | 288 |
| Msa1295160 | MtrunA17_Chr4g0013721 | 48.185 | 303 | 153 | 3 | 28 | 330 | 98 | 396 | 4.67e-96 | 290 |
| Msa1295160 | MtrunA17_Chr4g0013191 | 48.693 | 306 | 146 | 4 | 28 | 330 | 43 | 340 | 1.85e-95 | 286 |
| Msa1295160 | MtrunA17_Chr3g0106901 | 47.531 | 324 | 153 | 3 | 7 | 330 | 17 | 323 | 7.51e-95 | 284 |
| Msa1295160 | MtrunA17_Chr4g0013201 | 46.535 | 303 | 154 | 2 | 28 | 330 | 44 | 338 | 5.15e-94 | 283 |
| Msa1295160 | MtrunA17_Chr1g0213061 | 45.048 | 313 | 162 | 3 | 20 | 330 | 17 | 321 | 2.53e-91 | 275 |
| Msa1295160 | MtrunA17_Chr3g0107881 | 45.342 | 322 | 163 | 5 | 13 | 330 | 12 | 324 | 3.13e-91 | 275 |
| Msa1295160 | MtrunA17_Chr5g0421411 | 47.350 | 283 | 145 | 3 | 53 | 331 | 4 | 286 | 3.17e-91 | 274 |
| Msa1295160 | MtrunA17_Chr3g0128061 | 47.213 | 305 | 159 | 2 | 28 | 331 | 24 | 327 | 1.93e-89 | 271 |
| Msa1295160 | MtrunA17_Chr2g0322861 | 45.687 | 313 | 167 | 3 | 19 | 330 | 76 | 386 | 1.07e-88 | 271 |
| Msa1295160 | MtrunA17_Chr4g0076211 | 45.791 | 297 | 151 | 6 | 35 | 330 | 46 | 333 | 2.55e-86 | 263 |
| Msa1295160 | MtrunA17_Chr4g0024121 | 45.033 | 302 | 163 | 3 | 30 | 330 | 27 | 326 | 1.66e-84 | 258 |
| Msa1295160 | MtrunA17_Chr7g0268501 | 43.865 | 326 | 175 | 5 | 5 | 330 | 3 | 320 | 1.63e-83 | 255 |
| Msa1295160 | MtrunA17_Chr7g0268521 | 43.865 | 326 | 175 | 5 | 5 | 330 | 3 | 320 | 1.63e-83 | 255 |
| Msa1295160 | MtrunA17_Chr1g0204011 | 42.121 | 330 | 174 | 9 | 3 | 330 | 8 | 322 | 2.98e-80 | 247 |
| Msa1295160 | MtrunA17_Chr1g0164891 | 44.518 | 301 | 162 | 5 | 34 | 330 | 93 | 392 | 6.06e-80 | 248 |
| Msa1295160 | MtrunA17_Chr2g0279041 | 44.518 | 301 | 157 | 5 | 34 | 330 | 31 | 325 | 1.02e-79 | 246 |
| Msa1295160 | MtrunA17_Chr5g0432401 | 41.641 | 329 | 134 | 6 | 5 | 329 | 11 | 285 | 3.24e-78 | 240 |
| Msa1295160 | MtrunA17_Chr5g0405991 | 41.515 | 330 | 179 | 6 | 1 | 330 | 1 | 316 | 4.78e-78 | 241 |
| Msa1295160 | MtrunA17_Chr2g0296621 | 43.667 | 300 | 158 | 7 | 34 | 332 | 54 | 343 | 1.65e-77 | 241 |
| Msa1295160 | MtrunA17_Chr8g0371381 | 41.118 | 304 | 172 | 5 | 27 | 330 | 23 | 319 | 5.50e-76 | 236 |
| Msa1295160 | MtrunA17_Chr6g0477071 | 40.000 | 330 | 183 | 7 | 1 | 330 | 28 | 342 | 1.10e-75 | 236 |
| Msa1295160 | MtrunA17_Chr1g0194271 | 42.532 | 308 | 165 | 4 | 34 | 330 | 34 | 340 | 1.63e-75 | 235 |
| Msa1295160 | MtrunA17_Chr1g0194151 | 42.193 | 301 | 169 | 3 | 34 | 330 | 34 | 333 | 4.29e-75 | 234 |
| Msa1295160 | MtrunA17_Chr4g0063671 | 41.791 | 335 | 175 | 7 | 1 | 330 | 1 | 320 | 2.75e-74 | 231 |
| Msa1295160 | MtrunA17_Chr7g0254201 | 40.741 | 297 | 168 | 6 | 34 | 330 | 24 | 312 | 1.12e-73 | 230 |
| Msa1295160 | MtrunA17_Chr7g0254231 | 39.933 | 298 | 168 | 5 | 34 | 331 | 26 | 312 | 2.14e-73 | 229 |
| Msa1295160 | MtrunA17_Chr1g0188431 | 38.788 | 330 | 186 | 6 | 1 | 330 | 14 | 327 | 2.56e-73 | 229 |
| Msa1295160 | MtrunA17_Chr6g0460711 | 39.450 | 327 | 184 | 7 | 5 | 330 | 1 | 314 | 2.70e-73 | 229 |
| Msa1295160 | MtrunA17_Chr1g0157051 | 39.514 | 329 | 187 | 5 | 1 | 329 | 1 | 317 | 2.82e-73 | 229 |
| Msa1295160 | MtrunA17_Chr5g0401431 | 39.692 | 325 | 191 | 4 | 8 | 329 | 6 | 328 | 1.82e-71 | 224 |
| Msa1295160 | MtrunA17_Chr8g0364291 | 39.319 | 323 | 189 | 4 | 10 | 330 | 7 | 324 | 1.09e-70 | 223 |
| Msa1295160 | MtrunA17_Chr1g0181511 | 39.739 | 307 | 173 | 5 | 28 | 330 | 25 | 323 | 1.81e-70 | 222 |
| Msa1295160 | MtrunA17_Chr6g0467161 | 38.710 | 310 | 179 | 6 | 23 | 331 | 38 | 337 | 2.86e-69 | 219 |
| Msa1295160 | MtrunA17_Chr1g0181431 | 39.216 | 306 | 176 | 4 | 28 | 330 | 25 | 323 | 2.09e-67 | 214 |
| Msa1295160 | MtrunA17_Chr4g0046131 | 40.940 | 298 | 170 | 6 | 34 | 326 | 46 | 342 | 2.48e-67 | 214 |
| Msa1295160 | MtrunA17_Chr7g0225221 | 39.735 | 302 | 175 | 4 | 30 | 330 | 25 | 320 | 7.49e-67 | 213 |
| Msa1295160 | MtrunA17_Chr1g0148021 | 38.973 | 331 | 193 | 6 | 4 | 330 | 3 | 328 | 8.12e-67 | 213 |
| Msa1295160 | MtrunA17_Chr6g0467121 | 39.130 | 299 | 167 | 6 | 34 | 330 | 78 | 363 | 3.89e-66 | 213 |
| Msa1295160 | MtrunA17_Chr2g0316791 | 37.425 | 334 | 171 | 7 | 27 | 326 | 73 | 402 | 7.98e-66 | 213 |
| Msa1295160 | MtrunA17_Chr2g0316481 | 36.747 | 332 | 176 | 6 | 27 | 326 | 73 | 402 | 1.02e-65 | 212 |
| Msa1295160 | MtrunA17_Chr1g0197411 | 36.036 | 333 | 201 | 6 | 1 | 330 | 7 | 330 | 2.77e-65 | 209 |
| Msa1295160 | MtrunA17_Chr1g0181481 | 38.562 | 306 | 178 | 4 | 28 | 330 | 25 | 323 | 7.31e-65 | 207 |
| Msa1295160 | MtrunA17_Chr4g0075241 | 36.111 | 324 | 203 | 3 | 8 | 330 | 7 | 327 | 9.39e-65 | 207 |
| Msa1295160 | MtrunA17_Chr2g0316831 | 36.446 | 332 | 177 | 6 | 27 | 326 | 109 | 438 | 9.71e-65 | 211 |
| Msa1295160 | MtrunA17_Chr2g0278671 | 41.424 | 309 | 168 | 7 | 28 | 330 | 22 | 323 | 1.29e-64 | 207 |
| Msa1295160 | MtrunA17_Chr3g0136751 | 40.000 | 300 | 171 | 4 | 34 | 330 | 29 | 322 | 1.38e-64 | 207 |
| Msa1295160 | MtrunA17_Chr2g0316191 | 36.336 | 333 | 177 | 6 | 27 | 326 | 73 | 403 | 2.68e-64 | 209 |
| Msa1295160 | MtrunA17_Chr4g0072091 | 38.721 | 297 | 173 | 4 | 34 | 326 | 28 | 319 | 3.32e-64 | 206 |
| Msa1295160 | MtrunA17_Chr2g0329641 | 36.152 | 343 | 191 | 8 | 5 | 330 | 4 | 335 | 6.08e-64 | 206 |
| Msa1295160 | MtrunA17_Chr4g0053871 | 38.535 | 314 | 184 | 4 | 19 | 329 | 16 | 323 | 6.27e-64 | 205 |
| Msa1295160 | MtrunA17_Chr6g0467251 | 38.514 | 296 | 168 | 6 | 34 | 326 | 40 | 324 | 9.50e-63 | 203 |
| Msa1295160 | MtrunA17_Chr2g0311251 | 36.095 | 338 | 180 | 8 | 27 | 331 | 8 | 342 | 2.24e-61 | 199 |
| Msa1295160 | MtrunA17_Chr2g0279061 | 42.912 | 261 | 139 | 5 | 74 | 330 | 12 | 266 | 3.84e-60 | 193 |
| Msa1295160 | MtrunA17_Chr3g0114461 | 50.769 | 195 | 89 | 1 | 136 | 330 | 5 | 192 | 7.65e-60 | 190 |
| Msa1295160 | MtrunA17_Chr6g0451571 | 36.928 | 306 | 187 | 5 | 28 | 330 | 32 | 334 | 1.51e-59 | 194 |
| Msa1295160 | MtrunA17_Chr4g0074851 | 34.615 | 338 | 203 | 7 | 1 | 330 | 1 | 328 | 7.27e-59 | 192 |
| Msa1295160 | MtrunA17_Chr2g0311241 | 33.245 | 379 | 176 | 8 | 27 | 331 | 57 | 432 | 1.11e-58 | 195 |
| Msa1295160 | MtrunA17_Chr5g0413051 | 35.922 | 309 | 188 | 5 | 29 | 330 | 72 | 377 | 4.11e-55 | 184 |
| Msa1295160 | MtrunA17_Chr2g0292281 | 45.498 | 211 | 102 | 3 | 123 | 331 | 18 | 217 | 1.51e-52 | 173 |
| Msa1295160 | MtrunA17_Chr2g0316811 | 39.035 | 228 | 121 | 3 | 27 | 237 | 47 | 273 | 2.44e-46 | 160 |
| Msa1295160 | MtrunA17_Chr3g0114491 | 64.220 | 109 | 39 | 0 | 30 | 138 | 18 | 126 | 2.09e-42 | 143 |
| Msa1295160 | MtrunA17_Chr4g0004591 | 30.351 | 313 | 157 | 3 | 34 | 326 | 81 | 352 | 3.36e-39 | 142 |
| Msa1295160 | MtrunA17_Chr2g0316141 | 31.379 | 290 | 145 | 9 | 76 | 331 | 11 | 280 | 9.76e-37 | 133 |
| Msa1295160 | MtrunA17_Chr2g0316181 | 31.379 | 290 | 145 | 9 | 76 | 331 | 11 | 280 | 9.76e-37 | 133 |
| Msa1295160 | MtrunA17_Chr1g0181501 | 35.233 | 193 | 115 | 4 | 141 | 330 | 4 | 189 | 4.55e-31 | 115 |
| Msa1295160 | MtrunA17_Chr5g0432321 | 46.774 | 124 | 58 | 2 | 151 | 274 | 17 | 132 | 3.35e-28 | 106 |
| Msa1295160 | MtrunA17_Chr3g0104101 | 40.278 | 144 | 78 | 5 | 194 | 331 | 9 | 150 | 6.88e-24 | 95.5 |
| Msa1295160 | MtrunA17_Chr6g0468731 | 60.563 | 71 | 24 | 2 | 69 | 139 | 22 | 88 | 2.58e-21 | 87.0 |
| Msa1295160 | MtrunA17_Chr1g0181491 | 42.478 | 113 | 63 | 2 | 28 | 140 | 10 | 120 | 5.78e-21 | 87.8 |
| Msa1295160 | MtrunA17_Chr4g0013811 | 54.667 | 75 | 34 | 0 | 140 | 214 | 5 | 79 | 3.42e-20 | 83.6 |
| Msa1295160 | MtrunA17_Chr5g0432361 | 46.667 | 90 | 46 | 2 | 241 | 329 | 20 | 108 | 1.64e-18 | 79.7 |
| Msa1295160 | MtrunA17_Chr7g0254181 | 41.905 | 105 | 57 | 2 | 92 | 196 | 22 | 122 | 2.61e-18 | 80.9 |
| Msa1295160 | MtrunA17_Chr2g0316771 | 27.119 | 177 | 98 | 3 | 180 | 326 | 7 | 182 | 2.58e-17 | 79.0 |
| Msa1295160 | MtrunA17_Chr3g0137751 | 28.090 | 267 | 117 | 9 | 61 | 311 | 105 | 312 | 6.89e-16 | 77.4 |
| Msa1295160 | MtrunA17_Chr7g0254171 | 45.946 | 74 | 39 | 1 | 75 | 148 | 3 | 75 | 1.35e-14 | 70.1 |
| Msa1295160 | MtrunA17_Chr7g0268491 | 48.052 | 77 | 38 | 2 | 254 | 330 | 23 | 97 | 1.84e-13 | 65.5 |
| Msa1295160 | MtrunA17_Chr1g0196191 | 50.769 | 65 | 31 | 1 | 72 | 136 | 27 | 90 | 2.12e-13 | 67.0 |
| Msa1295160 | MtrunA17_Chr3g0124821 | 28.713 | 202 | 105 | 9 | 123 | 312 | 180 | 354 | 1.29e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295160 | AT5G66390.1 | 76.276 | 333 | 76 | 2 | 1 | 330 | 1 | 333 | 0.0 | 533 |
| Msa1295160 | AT4G36430.1 | 68.580 | 331 | 104 | 0 | 1 | 331 | 1 | 331 | 1.05e-165 | 465 |
| Msa1295160 | AT2G18150.1 | 66.667 | 336 | 106 | 1 | 1 | 330 | 1 | 336 | 2.60e-165 | 464 |
| Msa1295160 | AT3G50990.1 | 65.549 | 328 | 108 | 1 | 8 | 330 | 14 | 341 | 2.06e-155 | 439 |
| Msa1295160 | AT2G18140.1 | 61.493 | 335 | 124 | 1 | 1 | 330 | 1 | 335 | 1.40e-149 | 424 |
| Msa1295160 | AT1G44970.1 | 64.803 | 304 | 106 | 1 | 28 | 330 | 43 | 346 | 4.37e-139 | 398 |
| Msa1295160 | AT2G35380.1 | 54.984 | 311 | 131 | 3 | 27 | 330 | 27 | 335 | 2.66e-113 | 332 |
| Msa1295160 | AT4G08780.1 | 53.770 | 305 | 138 | 2 | 30 | 331 | 24 | 328 | 2.66e-111 | 327 |
| Msa1295160 | AT4G08770.1 | 53.770 | 305 | 138 | 2 | 30 | 331 | 24 | 328 | 1.09e-110 | 326 |
| Msa1295160 | AT5G06720.1 | 52.649 | 302 | 142 | 1 | 30 | 330 | 32 | 333 | 2.26e-110 | 325 |
| Msa1295160 | AT3G49110.1 | 50.621 | 322 | 156 | 2 | 13 | 331 | 16 | 337 | 2.52e-107 | 317 |
| Msa1295160 | AT3G32980.1 | 51.429 | 315 | 149 | 3 | 21 | 331 | 21 | 335 | 6.37e-107 | 317 |
| Msa1295160 | AT3G49120.1 | 51.948 | 308 | 145 | 2 | 27 | 331 | 29 | 336 | 2.84e-105 | 312 |
| Msa1295160 | AT2G38390.1 | 51.155 | 303 | 146 | 2 | 30 | 330 | 31 | 333 | 5.40e-105 | 311 |
| Msa1295160 | AT5G06730.1 | 50.000 | 302 | 150 | 1 | 30 | 330 | 33 | 334 | 7.23e-105 | 311 |
| Msa1295160 | AT5G05340.1 | 50.495 | 303 | 140 | 3 | 30 | 330 | 30 | 324 | 1.26e-103 | 307 |
| Msa1295160 | AT5G19890.1 | 50.779 | 321 | 149 | 4 | 13 | 330 | 13 | 327 | 1.71e-102 | 304 |
| Msa1295160 | AT1G14550.1 | 46.809 | 329 | 161 | 4 | 4 | 330 | 5 | 321 | 2.70e-100 | 298 |
| Msa1295160 | AT2G38380.1 | 50.165 | 303 | 149 | 2 | 30 | 330 | 31 | 333 | 1.31e-99 | 298 |
| Msa1295160 | AT4G16270.1 | 50.000 | 298 | 145 | 3 | 34 | 330 | 54 | 348 | 2.61e-99 | 297 |
| Msa1295160 | AT2G22420.1 | 48.684 | 304 | 152 | 3 | 27 | 330 | 20 | 319 | 6.20e-99 | 295 |
| Msa1295160 | AT1G49570.1 | 52.189 | 297 | 138 | 3 | 33 | 326 | 51 | 346 | 9.18e-99 | 295 |
| Msa1295160 | AT5G58400.1 | 49.671 | 304 | 142 | 4 | 30 | 330 | 30 | 325 | 1.06e-98 | 295 |
| Msa1295160 | AT5G58390.1 | 47.706 | 327 | 152 | 5 | 7 | 330 | 6 | 316 | 6.61e-97 | 290 |
| Msa1295160 | AT1G68850.1 | 44.884 | 303 | 162 | 3 | 34 | 331 | 34 | 336 | 1.16e-91 | 277 |
| Msa1295160 | AT1G14540.1 | 42.593 | 324 | 171 | 2 | 7 | 330 | 7 | 315 | 2.17e-91 | 275 |
| Msa1295160 | AT3G03670.1 | 43.465 | 329 | 170 | 5 | 6 | 330 | 5 | 321 | 1.88e-89 | 271 |
| Msa1295160 | AT1G05260.1 | 45.545 | 303 | 162 | 3 | 30 | 331 | 26 | 326 | 4.84e-87 | 265 |
| Msa1295160 | AT4G11290.1 | 43.293 | 328 | 177 | 4 | 5 | 330 | 6 | 326 | 8.79e-87 | 264 |
| Msa1295160 | AT5G19880.1 | 42.813 | 327 | 177 | 4 | 8 | 330 | 9 | 329 | 2.76e-85 | 260 |
| Msa1295160 | AT2G35380.2 | 53.414 | 249 | 107 | 3 | 89 | 330 | 1 | 247 | 1.53e-84 | 256 |
| Msa1295160 | AT5G15180.1 | 43.711 | 318 | 170 | 4 | 13 | 330 | 21 | 329 | 2.23e-83 | 256 |
| Msa1295160 | AT3G21770.1 | 44.667 | 300 | 163 | 3 | 30 | 328 | 29 | 326 | 9.06e-82 | 251 |
| Msa1295160 | AT5G64120.1 | 43.434 | 297 | 161 | 5 | 34 | 330 | 39 | 328 | 2.18e-81 | 250 |
| Msa1295160 | AT1G71695.1 | 41.716 | 338 | 179 | 7 | 5 | 331 | 10 | 340 | 3.02e-81 | 251 |
| Msa1295160 | AT5G17820.1 | 39.394 | 330 | 183 | 6 | 1 | 330 | 1 | 313 | 2.52e-79 | 244 |
| Msa1295160 | AT5G42180.1 | 44.333 | 300 | 161 | 4 | 30 | 329 | 23 | 316 | 1.19e-78 | 243 |
| Msa1295160 | AT5G17820.2 | 39.394 | 330 | 183 | 6 | 1 | 330 | 54 | 366 | 2.65e-78 | 244 |
| Msa1295160 | AT5G51890.1 | 39.759 | 332 | 186 | 7 | 1 | 330 | 3 | 322 | 4.02e-77 | 239 |
| Msa1295160 | AT2G41480.1 | 43.046 | 302 | 161 | 5 | 34 | 330 | 33 | 328 | 1.82e-76 | 238 |
| Msa1295160 | AT3G01190.1 | 43.098 | 297 | 164 | 4 | 34 | 330 | 30 | 321 | 2.25e-76 | 237 |
| Msa1295160 | AT2G39040.1 | 44.408 | 304 | 159 | 7 | 34 | 330 | 50 | 350 | 8.34e-76 | 237 |
| Msa1295160 | AT5G39580.1 | 42.000 | 300 | 162 | 7 | 34 | 330 | 29 | 319 | 3.61e-74 | 231 |
| Msa1295160 | AT4G26010.1 | 39.936 | 313 | 173 | 6 | 19 | 330 | 11 | 309 | 2.55e-73 | 229 |
| Msa1295160 | AT1G05240.1 | 41.254 | 303 | 165 | 6 | 34 | 330 | 30 | 325 | 3.83e-73 | 229 |
| Msa1295160 | AT1G05250.1 | 41.254 | 303 | 165 | 6 | 34 | 330 | 30 | 325 | 3.83e-73 | 229 |
| Msa1295160 | AT4G26010.2 | 39.936 | 313 | 173 | 6 | 19 | 330 | 39 | 337 | 4.58e-73 | 229 |
| Msa1295160 | AT5G64100.1 | 41.806 | 299 | 164 | 5 | 34 | 330 | 41 | 331 | 7.72e-71 | 223 |
| Msa1295160 | AT4G33870.1 | 37.313 | 335 | 171 | 5 | 28 | 326 | 66 | 397 | 1.39e-69 | 223 |
| Msa1295160 | AT4G33420.1 | 40.426 | 329 | 178 | 8 | 2 | 330 | 15 | 325 | 2.56e-69 | 219 |
| Msa1295160 | AT4G33420.2 | 40.426 | 329 | 178 | 8 | 2 | 330 | 62 | 372 | 1.17e-68 | 219 |
| Msa1295160 | AT4G37520.1 | 37.908 | 306 | 186 | 3 | 28 | 330 | 25 | 329 | 3.55e-68 | 216 |
| Msa1295160 | AT2G37130.2 | 39.867 | 301 | 170 | 5 | 34 | 330 | 3 | 296 | 1.59e-67 | 214 |
| Msa1295160 | AT1G34510.1 | 38.924 | 316 | 178 | 6 | 16 | 330 | 8 | 309 | 3.71e-67 | 213 |
| Msa1295160 | AT5G64110.1 | 41.667 | 300 | 165 | 6 | 34 | 330 | 38 | 330 | 4.31e-67 | 214 |
| Msa1295160 | AT5G47000.1 | 37.730 | 326 | 193 | 5 | 7 | 330 | 13 | 330 | 4.44e-67 | 214 |
| Msa1295160 | AT2G37130.1 | 39.867 | 301 | 170 | 5 | 34 | 330 | 34 | 327 | 4.60e-67 | 214 |
| Msa1295160 | AT5G40150.1 | 39.344 | 305 | 177 | 4 | 28 | 330 | 30 | 328 | 5.21e-67 | 213 |
| Msa1295160 | AT4G37530.1 | 38.487 | 304 | 183 | 3 | 30 | 330 | 27 | 329 | 5.54e-67 | 213 |
| Msa1295160 | AT4G25980.1 | 38.742 | 302 | 175 | 5 | 34 | 330 | 30 | 326 | 7.66e-67 | 213 |
| Msa1295160 | AT2G34060.1 | 40.132 | 304 | 176 | 5 | 30 | 328 | 42 | 344 | 1.37e-66 | 213 |
| Msa1295160 | AT1G30870.1 | 40.864 | 301 | 166 | 6 | 34 | 331 | 55 | 346 | 1.47e-66 | 213 |
| Msa1295160 | AT4G37520.2 | 37.582 | 306 | 184 | 4 | 28 | 330 | 25 | 326 | 1.54e-66 | 212 |
| Msa1295160 | AT3G28200.1 | 38.689 | 305 | 178 | 4 | 28 | 330 | 19 | 316 | 2.00e-66 | 212 |
| Msa1295160 | AT2G18980.1 | 37.237 | 333 | 196 | 5 | 1 | 330 | 1 | 323 | 4.88e-66 | 211 |
| Msa1295160 | AT1G24110.1 | 37.879 | 330 | 194 | 7 | 6 | 332 | 3 | 324 | 5.93e-66 | 211 |
| Msa1295160 | AT4G17690.1 | 38.944 | 303 | 177 | 4 | 30 | 330 | 26 | 322 | 2.23e-65 | 209 |
| Msa1295160 | AT1G77100.1 | 40.000 | 335 | 175 | 11 | 5 | 330 | 2 | 319 | 2.77e-65 | 209 |
| Msa1295160 | AT5G14130.1 | 35.604 | 323 | 203 | 5 | 9 | 330 | 12 | 330 | 3.27e-65 | 209 |
| Msa1295160 | AT4G31760.1 | 38.700 | 323 | 188 | 5 | 10 | 330 | 12 | 326 | 4.30e-65 | 209 |
| Msa1295160 | AT5G14130.2 | 35.604 | 323 | 203 | 5 | 9 | 330 | 53 | 371 | 8.14e-65 | 209 |
| Msa1295160 | AT5G22410.1 | 36.810 | 326 | 187 | 9 | 7 | 327 | 11 | 322 | 1.47e-63 | 205 |
| Msa1295160 | AT5G67400.1 | 38.235 | 306 | 185 | 3 | 28 | 330 | 25 | 329 | 1.51e-63 | 204 |
| Msa1295160 | AT2G24800.1 | 38.667 | 300 | 176 | 5 | 34 | 330 | 35 | 329 | 2.32e-63 | 204 |
| Msa1295160 | AT3G49960.1 | 37.667 | 300 | 183 | 3 | 34 | 330 | 31 | 329 | 4.62e-63 | 203 |
| Msa1295160 | AT2G43480.1 | 37.338 | 308 | 180 | 7 | 28 | 330 | 36 | 335 | 4.56e-61 | 198 |
| Msa1295160 | AT4G30170.1 | 35.922 | 309 | 188 | 5 | 26 | 330 | 23 | 325 | 7.98e-61 | 197 |
| Msa1295160 | AT4G21960.1 | 37.000 | 300 | 179 | 4 | 34 | 330 | 35 | 327 | 2.13e-59 | 194 |
| Msa1295160 | AT5G24070.1 | 37.248 | 298 | 175 | 6 | 38 | 330 | 45 | 335 | 2.33e-59 | 194 |
| Msa1295160 | AT4G37530.2 | 37.945 | 253 | 154 | 2 | 30 | 279 | 27 | 279 | 1.68e-54 | 180 |
| Msa1295160 | AT3G17070.1 | 33.993 | 303 | 189 | 6 | 34 | 330 | 42 | 339 | 1.84e-50 | 171 |
| Msa1295160 | AT4G25980.2 | 46.341 | 164 | 84 | 3 | 34 | 197 | 75 | 234 | 1.47e-44 | 154 |
| Msa1295160 | AT5G39580.2 | 45.614 | 171 | 88 | 3 | 34 | 204 | 29 | 194 | 5.02e-44 | 151 |
| Msa1295160 | AT2G24800.2 | 40.933 | 193 | 108 | 2 | 34 | 224 | 35 | 223 | 2.81e-38 | 136 |
| Msa1295160 | AT3G17070.2 | 31.900 | 279 | 178 | 7 | 58 | 330 | 4 | 276 | 7.47e-37 | 134 |
| Msa1295160 | AT3G42570.1 | 39.560 | 91 | 54 | 1 | 106 | 195 | 57 | 147 | 1.51e-13 | 67.8 |
| Msa1295160 | AT4G08390.3 | 29.327 | 208 | 108 | 8 | 117 | 312 | 179 | 359 | 1.49e-12 | 68.2 |
| Msa1295160 | AT4G08390.2 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.59e-12 | 68.2 |
| Msa1295160 | AT4G08390.5 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.59e-12 | 68.2 |
| Msa1295160 | AT4G08390.1 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.59e-12 | 68.2 |
Find 66 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATCTTGTTGCTCTTTC+TGG | 0.030538 | 8_3:+53198111 | Msa1295160:CDS |
| TCTCATGCTTCTTTCTTTAC+TGG | 0.153490 | 8_3:+53197122 | Msa1295160:CDS |
| TTGCCTCTGTCATAAGAAAA+TGG | 0.161924 | 8_3:+53197158 | Msa1295160:CDS |
| TTCTTATGACAGAGGCAAAA+AGG | 0.315188 | 8_3:-53197153 | None:intergenic |
| AGTCTAGGAAGAACAGATTT+TGG | 0.315899 | 8_3:-53198754 | None:intergenic |
| CTTGCTTGCCATTTCCAGTT+TGG | 0.325339 | 8_3:-53198667 | None:intergenic |
| TTGTCTGGAATGTGTTGTTT+GGG | 0.331686 | 8_3:-53198053 | None:intergenic |
| CCTAGAGGCACTTCCCAGTT+TGG | 0.335817 | 8_3:-53197976 | None:intergenic |
| CAATTACTTCAAGAACCTAT+TGG | 0.348212 | 8_3:+53198802 | Msa1295160:CDS |
| ATTGTCTGGAATGTGTTGTT+TGG | 0.359012 | 8_3:-53198054 | None:intergenic |
| AGTCATAAAACTGTGGATAA+AGG | 0.363575 | 8_3:-53197188 | None:intergenic |
| CGCACTCAATGTCCAAAATC+TGG | 0.374881 | 8_3:+53198725 | Msa1295160:CDS |
| CTCTACAACCAAACTGGAAA+TGG | 0.376548 | 8_3:+53198659 | Msa1295160:CDS |
| AGTCAAGGTGCACCAGCTTT+AGG | 0.378431 | 8_3:+53198630 | Msa1295160:CDS |
| AGTGTCTTGTGCTGACATTC+TGG | 0.388994 | 8_3:+53197684 | Msa1295160:CDS |
| CTGACTAAATTCAAACTTCA+AGG | 0.398099 | 8_3:+53198078 | Msa1295160:CDS |
| TGAATTTAGTCAGGATTGTC+TGG | 0.402260 | 8_3:-53198068 | None:intergenic |
| CAAAGACTCTACAACCAAAC+TGG | 0.405912 | 8_3:+53198653 | Msa1295160:CDS |
| CAAGAACCTATTGGCTTACA+AGG | 0.407095 | 8_3:+53198811 | Msa1295160:CDS |
| CTTGAAGTTTGAATTTAGTC+AGG | 0.409451 | 8_3:-53198077 | None:intergenic |
| TGGAATGTGTTGTTTGGGGC+TGG | 0.416065 | 8_3:-53198048 | None:intergenic |
| TGCCTCTGTCATAAGAAAAT+GGG | 0.416344 | 8_3:+53197159 | Msa1295160:CDS |
| TGTAGGCTGGTGGACCAAAC+TGG | 0.428965 | 8_3:+53197962 | Msa1295160:intron |
| TGGGGCTGGAATGTTGTTGT+TGG | 0.431670 | 8_3:-53198034 | None:intergenic |
| CCTCTAGCTGAATTACGGTT+AGG | 0.445893 | 8_3:-53197607 | None:intergenic |
| GAAACATTAGAACAAATTGC+AGG | 0.446729 | 8_3:+53198987 | Msa1295160:CDS |
| CAAATCCTCTAGCTGAATTA+CGG | 0.449179 | 8_3:-53197612 | None:intergenic |
| ATAGTCCCTTGTAAGCCAAT+AGG | 0.450211 | 8_3:-53198817 | None:intergenic |
| TATCTCCTTTGACAGGTTCA+AGG | 0.463087 | 8_3:+53198963 | Msa1295160:CDS |
| GTAGAGTCTTTGCCTAAAGC+TGG | 0.469738 | 8_3:-53198642 | None:intergenic |
| TGTAAAGGGAGCCACACTAT+AGG | 0.470026 | 8_3:+53198605 | Msa1295160:intron |
| TGCAACAGCGTTGGCAAGGA+TGG | 0.479112 | 8_3:-53197244 | None:intergenic |
| TAATTCAGCTAGAGGATTTG+AGG | 0.484271 | 8_3:+53197615 | Msa1295160:CDS |
| GAATCAAGAATCAGCTGAGT+TGG | 0.487866 | 8_3:+53198868 | Msa1295160:CDS |
| GGAAATATATCTCCTTTGAC+AGG | 0.492948 | 8_3:+53198956 | Msa1295160:CDS |
| TCACTAGGTGCAAGCTTAAG+TGG | 0.493970 | 8_3:+53198009 | Msa1295160:CDS |
| CGCGAAGTCTATGATCAAGA+TGG | 0.511590 | 8_3:+53198934 | Msa1295160:CDS |
| TTAACAATATTCTGAGCTTG+TGG | 0.514680 | 8_3:-53197219 | None:intergenic |
| ATCTCCTTTGACAGGTTCAA+GGG | 0.516893 | 8_3:+53198964 | Msa1295160:CDS |
| ATTGCAGGGTGATTAATACT+TGG | 0.516904 | 8_3:+53199002 | Msa1295160:CDS |
| CCTTTGCAACAGCGTTGGCA+AGG | 0.536581 | 8_3:-53197248 | None:intergenic |
| TGGAAGCATTATTAGTGAGA+AGG | 0.547651 | 8_3:+53197576 | Msa1295160:CDS |
| TCAGCACAAGACACTGTATG+AGG | 0.547706 | 8_3:-53197676 | None:intergenic |
| GGAAGCATTATTAGTGAGAA+GGG | 0.552053 | 8_3:+53197577 | Msa1295160:CDS |
| AAAGAAAAGATCATTTCTCT+CGG | 0.552769 | 8_3:-53198903 | None:intergenic |
| TTGTTGGTGTGACATAGTCT+AGG | 0.552976 | 8_3:-53198769 | None:intergenic |
| CCTTGCCAACGCTGTTGCAA+AGG | 0.555903 | 8_3:+53197248 | Msa1295160:CDS |
| TTTCCCCTTGAACCTGTCAA+AGG | 0.564091 | 8_3:-53198968 | None:intergenic |
| CCAAACTGGGAAGTGCCTCT+AGG | 0.565559 | 8_3:+53197976 | Msa1295160:CDS |
| GCGAAGTCTATGATCAAGAT+GGG | 0.567884 | 8_3:+53198935 | Msa1295160:CDS |
| ACCTTGACTTTCCTATAGTG+TGG | 0.568848 | 8_3:-53198616 | None:intergenic |
| CCTAACCGTAATTCAGCTAG+AGG | 0.578401 | 8_3:+53197607 | Msa1295160:CDS |
| AGGTTCCTTTGCAACAGCGT+TGG | 0.595415 | 8_3:-53197253 | None:intergenic |
| ATACCTTGACAAAACAGTCA+TGG | 0.595491 | 8_3:-53197308 | None:intergenic |
| TCAATATTGTTAGATAACAG+TGG | 0.609885 | 8_3:+53197556 | Msa1295160:CDS |
| TGTCTGGAATGTGTTGTTTG+GGG | 0.613894 | 8_3:-53198052 | None:intergenic |
| CTAGGCAGAAGAGACTCACT+AGG | 0.615944 | 8_3:+53197994 | Msa1295160:CDS |
| AAACATTAGAACAAATTGCA+GGG | 0.636631 | 8_3:+53198988 | Msa1295160:CDS |
| TCTCCTTTGACAGGTTCAAG+GGG | 0.642331 | 8_3:+53198965 | Msa1295160:CDS |
| AGTGAGTCTCTTCTGCCTAG+AGG | 0.647836 | 8_3:-53197991 | None:intergenic |
| AAGAACCTATTGGCTTACAA+GGG | 0.648661 | 8_3:+53198812 | Msa1295160:CDS |
| ACTCAATGTCCAAAATCTGG+TGG | 0.654856 | 8_3:+53198728 | Msa1295160:CDS |
| GTAGGCTGGTGGACCAAACT+GGG | 0.661267 | 8_3:+53197963 | Msa1295160:intron |
| CATGAATAGTCATAAAACTG+TGG | 0.664730 | 8_3:-53197195 | None:intergenic |
| GCCACACTATAGGAAAGTCA+AGG | 0.668868 | 8_3:+53198615 | Msa1295160:CDS |
| AAAAGTGAAGCAGCTATACG+AGG | 0.700714 | 8_3:-53197273 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACAAAAGATAAAATAG+AGG | - | chr8_3:53197842-53197861 | None:intergenic | 15.0% |
| !!! | TCTGATTTTAAATAGATATA+GGG | - | chr8_3:53198223-53198242 | None:intergenic | 15.0% |
| !! | CATATATAAATTTGAATTTG+AGG | - | chr8_3:53198269-53198288 | None:intergenic | 15.0% |
| !! | TAATATTATATTATTCTCCA+TGG | + | chr8_3:53198373-53198392 | Msa1295160:intron | 15.0% |
| !! | TATAACAAAAGATAAAATAG+AGG | - | chr8_3:53197842-53197861 | None:intergenic | 15.0% |
| !!! | TCTGATTTTAAATAGATATA+GGG | - | chr8_3:53198223-53198242 | None:intergenic | 15.0% |
| !! | CATATATAAATTTGAATTTG+AGG | - | chr8_3:53198269-53198288 | None:intergenic | 15.0% |
| !! | TAATATTATATTATTCTCCA+TGG | + | chr8_3:53198373-53198392 | Msa1295160:intron | 15.0% |
| !! | TTGAATGTAATCATATATGT+TGG | - | chr8_3:53197483-53197502 | None:intergenic | 20.0% |
| !! | AGTAGTAATGTAAGAATATA+AGG | - | chr8_3:53197932-53197951 | None:intergenic | 20.0% |
| !!! | GTCTGATTTTAAATAGATAT+AGG | - | chr8_3:53198224-53198243 | None:intergenic | 20.0% |
| !! | TTGAATGTAATCATATATGT+TGG | - | chr8_3:53197483-53197502 | None:intergenic | 20.0% |
| !! | AGTAGTAATGTAAGAATATA+AGG | - | chr8_3:53197932-53197951 | None:intergenic | 20.0% |
| !!! | GTCTGATTTTAAATAGATAT+AGG | - | chr8_3:53198224-53198243 | None:intergenic | 20.0% |
| ! | TATTGCAAAAACAACAACAA+TGG | + | chr8_3:53197083-53197102 | Msa1295160:exon | 25.0% |
| ! | TCAATATTGTTAGATAACAG+TGG | + | chr8_3:53197556-53197575 | Msa1295160:CDS | 25.0% |
| ! | AATAGACGAAACACAATTTA+TGG | - | chr8_3:53197812-53197831 | None:intergenic | 25.0% |
| ! | AATGTAAGAATATAAGGCTT+CGG | - | chr8_3:53197926-53197945 | None:intergenic | 25.0% |
| ! | AAATTTATGTGACAAGTTCA+AGG | - | chr8_3:53198143-53198162 | None:intergenic | 25.0% |
| !! | TGTGTTAACTTTTATCACAT+TGG | - | chr8_3:53198410-53198429 | None:intergenic | 25.0% |
| ! | AATGACTATTTACTTAGCTA+CGG | - | chr8_3:53198495-53198514 | None:intergenic | 25.0% |
| ! | AAATTTCGTGCAATTGTAAA+GGG | + | chr8_3:53198591-53198610 | Msa1295160:intron | 25.0% |
| !! | TAATTGTTGTCGAATTTTGT+TGG | - | chr8_3:53198788-53198807 | None:intergenic | 25.0% |
| ! | AAAGAAAAGATCATTTCTCT+CGG | - | chr8_3:53198906-53198925 | None:intergenic | 25.0% |
| ! | AAACATTAGAACAAATTGCA+GGG | + | chr8_3:53198988-53199007 | Msa1295160:CDS | 25.0% |
| ! | TATTGCAAAAACAACAACAA+TGG | + | chr8_3:53197083-53197102 | Msa1295160:exon | 25.0% |
| ! | TCAATATTGTTAGATAACAG+TGG | + | chr8_3:53197556-53197575 | Msa1295160:CDS | 25.0% |
| ! | AATAGACGAAACACAATTTA+TGG | - | chr8_3:53197812-53197831 | None:intergenic | 25.0% |
| ! | AATGTAAGAATATAAGGCTT+CGG | - | chr8_3:53197926-53197945 | None:intergenic | 25.0% |
| ! | AAATTTATGTGACAAGTTCA+AGG | - | chr8_3:53198143-53198162 | None:intergenic | 25.0% |
| !! | TGTGTTAACTTTTATCACAT+TGG | - | chr8_3:53198410-53198429 | None:intergenic | 25.0% |
| ! | AATGACTATTTACTTAGCTA+CGG | - | chr8_3:53198495-53198514 | None:intergenic | 25.0% |
| ! | AAATTTCGTGCAATTGTAAA+GGG | + | chr8_3:53198591-53198610 | Msa1295160:intron | 25.0% |
| !! | TAATTGTTGTCGAATTTTGT+TGG | - | chr8_3:53198788-53198807 | None:intergenic | 25.0% |
| ! | AAAGAAAAGATCATTTCTCT+CGG | - | chr8_3:53198906-53198925 | None:intergenic | 25.0% |
| ! | AAACATTAGAACAAATTGCA+GGG | + | chr8_3:53198988-53199007 | Msa1295160:CDS | 25.0% |
| AGTCATAAAACTGTGGATAA+AGG | - | chr8_3:53197191-53197210 | None:intergenic | 30.0% | |
| CATGAATAGTCATAAAACTG+TGG | - | chr8_3:53197198-53197217 | None:intergenic | 30.0% | |
| TTAACAATATTCTGAGCTTG+TGG | - | chr8_3:53197222-53197241 | None:intergenic | 30.0% | |
| !!! | CAACATCAAAGTTTTTGGTA+CGG | - | chr8_3:53197379-53197398 | None:intergenic | 30.0% |
| TACCAAAAACTTTGATGTTG+CGG | + | chr8_3:53197379-53197398 | Msa1295160:intron | 30.0% | |
| CTTGAAGTTTGAATTTAGTC+AGG | - | chr8_3:53198080-53198099 | None:intergenic | 30.0% | |
| CTGACTAAATTCAAACTTCA+AGG | + | chr8_3:53198078-53198097 | Msa1295160:CDS | 30.0% | |
| CAAATTTCGTGCAATTGTAA+AGG | + | chr8_3:53198590-53198609 | Msa1295160:intron | 30.0% | |
| CAATTACTTCAAGAACCTAT+TGG | + | chr8_3:53198802-53198821 | Msa1295160:CDS | 30.0% | |
| GAAACATTAGAACAAATTGC+AGG | + | chr8_3:53198987-53199006 | Msa1295160:CDS | 30.0% | |
| AGTCATAAAACTGTGGATAA+AGG | - | chr8_3:53197191-53197210 | None:intergenic | 30.0% | |
| CATGAATAGTCATAAAACTG+TGG | - | chr8_3:53197198-53197217 | None:intergenic | 30.0% | |
| TTAACAATATTCTGAGCTTG+TGG | - | chr8_3:53197222-53197241 | None:intergenic | 30.0% | |
| !!! | CAACATCAAAGTTTTTGGTA+CGG | - | chr8_3:53197379-53197398 | None:intergenic | 30.0% |
| TACCAAAAACTTTGATGTTG+CGG | + | chr8_3:53197379-53197398 | Msa1295160:intron | 30.0% | |
| CTTGAAGTTTGAATTTAGTC+AGG | - | chr8_3:53198080-53198099 | None:intergenic | 30.0% | |
| CTGACTAAATTCAAACTTCA+AGG | + | chr8_3:53198078-53198097 | Msa1295160:CDS | 30.0% | |
| CAAATTTCGTGCAATTGTAA+AGG | + | chr8_3:53198590-53198609 | Msa1295160:intron | 30.0% | |
| CAATTACTTCAAGAACCTAT+TGG | + | chr8_3:53198802-53198821 | Msa1295160:CDS | 30.0% | |
| GAAACATTAGAACAAATTGC+AGG | + | chr8_3:53198987-53199006 | Msa1295160:CDS | 30.0% | |
| TCTCATGCTTCTTTCTTTAC+TGG | + | chr8_3:53197122-53197141 | Msa1295160:CDS | 35.0% | |
| TTCTTATGACAGAGGCAAAA+AGG | - | chr8_3:53197156-53197175 | None:intergenic | 35.0% | |
| TTGCCTCTGTCATAAGAAAA+TGG | + | chr8_3:53197158-53197177 | Msa1295160:CDS | 35.0% | |
| TGCCTCTGTCATAAGAAAAT+GGG | + | chr8_3:53197159-53197178 | Msa1295160:CDS | 35.0% | |
| ! | AACCCATTTTCTTATGACAG+AGG | - | chr8_3:53197164-53197183 | None:intergenic | 35.0% |
| ! | TTTCCATGACTGTTTTGTCA+AGG | + | chr8_3:53197305-53197324 | Msa1295160:CDS | 35.0% |
| ATACCTTGACAAAACAGTCA+TGG | - | chr8_3:53197311-53197330 | None:intergenic | 35.0% | |
| ! | TAAGAAGTTGATCATGTTGC+AGG | + | chr8_3:53197522-53197541 | Msa1295160:intron | 35.0% |
| ! | AAGAAGTTGATCATGTTGCA+GGG | + | chr8_3:53197523-53197542 | Msa1295160:intron | 35.0% |
| !! | TGGAAGCATTATTAGTGAGA+AGG | + | chr8_3:53197576-53197595 | Msa1295160:CDS | 35.0% |
| !! | GGAAGCATTATTAGTGAGAA+GGG | + | chr8_3:53197577-53197596 | Msa1295160:CDS | 35.0% |
| CAAATCCTCTAGCTGAATTA+CGG | - | chr8_3:53197615-53197634 | None:intergenic | 35.0% | |
| TAATTCAGCTAGAGGATTTG+AGG | + | chr8_3:53197615-53197634 | Msa1295160:CDS | 35.0% | |
| ! | TACTACTCCCTTTTATGTGT+AGG | + | chr8_3:53197945-53197964 | Msa1295160:intron | 35.0% |
| !! | TTGTCTGGAATGTGTTGTTT+GGG | - | chr8_3:53198056-53198075 | None:intergenic | 35.0% |
| ! | ATTGTCTGGAATGTGTTGTT+TGG | - | chr8_3:53198057-53198076 | None:intergenic | 35.0% |
| TGAATTTAGTCAGGATTGTC+TGG | - | chr8_3:53198071-53198090 | None:intergenic | 35.0% | |
| ! | GAATTTGAGGCACATGTATT+AGG | - | chr8_3:53198256-53198275 | None:intergenic | 35.0% |
| AATACCACCTAAATGTGATG+TGG | + | chr8_3:53198335-53198354 | Msa1295160:intron | 35.0% | |
| ATACCACCTAAATGTGATGT+GGG | + | chr8_3:53198336-53198355 | Msa1295160:intron | 35.0% | |
| CTATTACCCACATCACATTT+AGG | - | chr8_3:53198345-53198364 | None:intergenic | 35.0% | |
| GCAACTGATGCTTAAACTTT+AGG | - | chr8_3:53198449-53198468 | None:intergenic | 35.0% | |
| ! | AGTCTAGGAAGAACAGATTT+TGG | - | chr8_3:53198757-53198776 | None:intergenic | 35.0% |
| !! | AAGAACCTATTGGCTTACAA+GGG | + | chr8_3:53198812-53198831 | Msa1295160:CDS | 35.0% |
| GGAAATATATCTCCTTTGAC+AGG | + | chr8_3:53198956-53198975 | Msa1295160:CDS | 35.0% | |
| ATTGCAGGGTGATTAATACT+TGG | + | chr8_3:53199002-53199021 | Msa1295160:CDS | 35.0% | |
| TCTCATGCTTCTTTCTTTAC+TGG | + | chr8_3:53197122-53197141 | Msa1295160:CDS | 35.0% | |
| TTCTTATGACAGAGGCAAAA+AGG | - | chr8_3:53197156-53197175 | None:intergenic | 35.0% | |
| TTGCCTCTGTCATAAGAAAA+TGG | + | chr8_3:53197158-53197177 | Msa1295160:CDS | 35.0% | |
| TGCCTCTGTCATAAGAAAAT+GGG | + | chr8_3:53197159-53197178 | Msa1295160:CDS | 35.0% | |
| ! | AACCCATTTTCTTATGACAG+AGG | - | chr8_3:53197164-53197183 | None:intergenic | 35.0% |
| ! | TTTCCATGACTGTTTTGTCA+AGG | + | chr8_3:53197305-53197324 | Msa1295160:CDS | 35.0% |
| ATACCTTGACAAAACAGTCA+TGG | - | chr8_3:53197311-53197330 | None:intergenic | 35.0% | |
| ! | TAAGAAGTTGATCATGTTGC+AGG | + | chr8_3:53197522-53197541 | Msa1295160:intron | 35.0% |
| ! | AAGAAGTTGATCATGTTGCA+GGG | + | chr8_3:53197523-53197542 | Msa1295160:intron | 35.0% |
| !! | TGGAAGCATTATTAGTGAGA+AGG | + | chr8_3:53197576-53197595 | Msa1295160:CDS | 35.0% |
| !! | GGAAGCATTATTAGTGAGAA+GGG | + | chr8_3:53197577-53197596 | Msa1295160:CDS | 35.0% |
| CAAATCCTCTAGCTGAATTA+CGG | - | chr8_3:53197615-53197634 | None:intergenic | 35.0% | |
| TAATTCAGCTAGAGGATTTG+AGG | + | chr8_3:53197615-53197634 | Msa1295160:CDS | 35.0% | |
| ! | TACTACTCCCTTTTATGTGT+AGG | + | chr8_3:53197945-53197964 | Msa1295160:intron | 35.0% |
| !! | TTGTCTGGAATGTGTTGTTT+GGG | - | chr8_3:53198056-53198075 | None:intergenic | 35.0% |
| ! | ATTGTCTGGAATGTGTTGTT+TGG | - | chr8_3:53198057-53198076 | None:intergenic | 35.0% |
| TGAATTTAGTCAGGATTGTC+TGG | - | chr8_3:53198071-53198090 | None:intergenic | 35.0% | |
| ! | GAATTTGAGGCACATGTATT+AGG | - | chr8_3:53198256-53198275 | None:intergenic | 35.0% |
| AATACCACCTAAATGTGATG+TGG | + | chr8_3:53198335-53198354 | Msa1295160:intron | 35.0% | |
| ATACCACCTAAATGTGATGT+GGG | + | chr8_3:53198336-53198355 | Msa1295160:intron | 35.0% | |
| CTATTACCCACATCACATTT+AGG | - | chr8_3:53198345-53198364 | None:intergenic | 35.0% | |
| GCAACTGATGCTTAAACTTT+AGG | - | chr8_3:53198449-53198468 | None:intergenic | 35.0% | |
| ! | AGTCTAGGAAGAACAGATTT+TGG | - | chr8_3:53198757-53198776 | None:intergenic | 35.0% |
| !! | AAGAACCTATTGGCTTACAA+GGG | + | chr8_3:53198812-53198831 | Msa1295160:CDS | 35.0% |
| GGAAATATATCTCCTTTGAC+AGG | + | chr8_3:53198956-53198975 | Msa1295160:CDS | 35.0% | |
| ATTGCAGGGTGATTAATACT+TGG | + | chr8_3:53199002-53199021 | Msa1295160:CDS | 35.0% | |
| AAAAGTGAAGCAGCTATACG+AGG | - | chr8_3:53197276-53197295 | None:intergenic | 40.0% | |
| GACCATGTGATATTAAGTCG+TGG | + | chr8_3:53197353-53197372 | Msa1295160:intron | 40.0% | |
| ! | CACCGCAACATCAAAGTTTT+TGG | - | chr8_3:53197384-53197403 | None:intergenic | 40.0% |
| !! | GTCTTCAATTTGAAGTGTCG+AGG | - | chr8_3:53197433-53197452 | None:intergenic | 40.0% |
| !! | TGTCTGGAATGTGTTGTTTG+GGG | - | chr8_3:53198055-53198074 | None:intergenic | 40.0% |
| GTTGATCTTGTTGCTCTTTC+TGG | + | chr8_3:53198111-53198130 | Msa1295160:CDS | 40.0% | |
| TTACCCACATCACATTTAGG+TGG | - | chr8_3:53198342-53198361 | None:intergenic | 40.0% | |
| ACCTTGACTTTCCTATAGTG+TGG | - | chr8_3:53198619-53198638 | None:intergenic | 40.0% | |
| CAAAGACTCTACAACCAAAC+TGG | + | chr8_3:53198653-53198672 | Msa1295160:CDS | 40.0% | |
| CTCTACAACCAAACTGGAAA+TGG | + | chr8_3:53198659-53198678 | Msa1295160:CDS | 40.0% | |
| ACTCAATGTCCAAAATCTGG+TGG | + | chr8_3:53198728-53198747 | Msa1295160:CDS | 40.0% | |
| ! | TTTTGGTCACCACCAGATTT+TGG | - | chr8_3:53198740-53198759 | None:intergenic | 40.0% |
| TTGTTGGTGTGACATAGTCT+AGG | - | chr8_3:53198772-53198791 | None:intergenic | 40.0% | |
| !! | CAAGAACCTATTGGCTTACA+AGG | + | chr8_3:53198811-53198830 | Msa1295160:CDS | 40.0% |
| ATAGTCCCTTGTAAGCCAAT+AGG | - | chr8_3:53198820-53198839 | None:intergenic | 40.0% | |
| GAATCAAGAATCAGCTGAGT+TGG | + | chr8_3:53198868-53198887 | Msa1295160:CDS | 40.0% | |
| GCGAAGTCTATGATCAAGAT+GGG | + | chr8_3:53198935-53198954 | Msa1295160:CDS | 40.0% | |
| TATCTCCTTTGACAGGTTCA+AGG | + | chr8_3:53198963-53198982 | Msa1295160:CDS | 40.0% | |
| ATCTCCTTTGACAGGTTCAA+GGG | + | chr8_3:53198964-53198983 | Msa1295160:CDS | 40.0% | |
| AAAAGTGAAGCAGCTATACG+AGG | - | chr8_3:53197276-53197295 | None:intergenic | 40.0% | |
| GACCATGTGATATTAAGTCG+TGG | + | chr8_3:53197353-53197372 | Msa1295160:intron | 40.0% | |
| ! | CACCGCAACATCAAAGTTTT+TGG | - | chr8_3:53197384-53197403 | None:intergenic | 40.0% |
| !! | GTCTTCAATTTGAAGTGTCG+AGG | - | chr8_3:53197433-53197452 | None:intergenic | 40.0% |
| !! | TGTCTGGAATGTGTTGTTTG+GGG | - | chr8_3:53198055-53198074 | None:intergenic | 40.0% |
| GTTGATCTTGTTGCTCTTTC+TGG | + | chr8_3:53198111-53198130 | Msa1295160:CDS | 40.0% | |
| TTACCCACATCACATTTAGG+TGG | - | chr8_3:53198342-53198361 | None:intergenic | 40.0% | |
| ACCTTGACTTTCCTATAGTG+TGG | - | chr8_3:53198619-53198638 | None:intergenic | 40.0% | |
| CAAAGACTCTACAACCAAAC+TGG | + | chr8_3:53198653-53198672 | Msa1295160:CDS | 40.0% | |
| CTCTACAACCAAACTGGAAA+TGG | + | chr8_3:53198659-53198678 | Msa1295160:CDS | 40.0% | |
| ACTCAATGTCCAAAATCTGG+TGG | + | chr8_3:53198728-53198747 | Msa1295160:CDS | 40.0% | |
| ! | TTTTGGTCACCACCAGATTT+TGG | - | chr8_3:53198740-53198759 | None:intergenic | 40.0% |
| TTGTTGGTGTGACATAGTCT+AGG | - | chr8_3:53198772-53198791 | None:intergenic | 40.0% | |
| !! | CAAGAACCTATTGGCTTACA+AGG | + | chr8_3:53198811-53198830 | Msa1295160:CDS | 40.0% |
| ATAGTCCCTTGTAAGCCAAT+AGG | - | chr8_3:53198820-53198839 | None:intergenic | 40.0% | |
| GAATCAAGAATCAGCTGAGT+TGG | + | chr8_3:53198868-53198887 | Msa1295160:CDS | 40.0% | |
| GCGAAGTCTATGATCAAGAT+GGG | + | chr8_3:53198935-53198954 | Msa1295160:CDS | 40.0% | |
| TATCTCCTTTGACAGGTTCA+AGG | + | chr8_3:53198963-53198982 | Msa1295160:CDS | 40.0% | |
| ATCTCCTTTGACAGGTTCAA+GGG | + | chr8_3:53198964-53198983 | Msa1295160:CDS | 40.0% | |
| GGCCACGACTTAATATCACA+TGG | - | chr8_3:53197358-53197377 | None:intergenic | 45.0% | |
| AAGACGTGTCCAACATGTGT+CGG | + | chr8_3:53197448-53197467 | Msa1295160:intron | 45.0% | |
| TATCTGACACCGACACATGT+TGG | - | chr8_3:53197460-53197479 | None:intergenic | 45.0% | |
| CCTCTAGCTGAATTACGGTT+AGG | - | chr8_3:53197610-53197629 | None:intergenic | 45.0% | |
| CCTAACCGTAATTCAGCTAG+AGG | + | chr8_3:53197607-53197626 | Msa1295160:CDS | 45.0% | |
| TCAGCACAAGACACTGTATG+AGG | - | chr8_3:53197679-53197698 | None:intergenic | 45.0% | |
| ! | AGTGTCTTGTGCTGACATTC+TGG | + | chr8_3:53197684-53197703 | Msa1295160:CDS | 45.0% |
| ! | ACTCCCTTTTATGTGTAGGC+TGG | + | chr8_3:53197949-53197968 | Msa1295160:intron | 45.0% |
| CCACCAGCCTACACATAAAA+GGG | - | chr8_3:53197955-53197974 | None:intergenic | 45.0% | |
| TCCACCAGCCTACACATAAA+AGG | - | chr8_3:53197956-53197975 | None:intergenic | 45.0% | |
| TCACTAGGTGCAAGCTTAAG+TGG | + | chr8_3:53198009-53198028 | Msa1295160:CDS | 45.0% | |
| CATTGGTGTATGTCAGTCCA+TGG | - | chr8_3:53198393-53198412 | None:intergenic | 45.0% | |
| TGTAAAGGGAGCCACACTAT+AGG | + | chr8_3:53198605-53198624 | Msa1295160:intron | 45.0% | |
| GCCACACTATAGGAAAGTCA+AGG | + | chr8_3:53198615-53198634 | Msa1295160:CDS | 45.0% | |
| GTAGAGTCTTTGCCTAAAGC+TGG | - | chr8_3:53198645-53198664 | None:intergenic | 45.0% | |
| ! | CTTGCTTGCCATTTCCAGTT+TGG | - | chr8_3:53198670-53198689 | None:intergenic | 45.0% |
| CGCACTCAATGTCCAAAATC+TGG | + | chr8_3:53198725-53198744 | Msa1295160:CDS | 45.0% | |
| CGCGAAGTCTATGATCAAGA+TGG | + | chr8_3:53198934-53198953 | Msa1295160:CDS | 45.0% | |
| TCTCCTTTGACAGGTTCAAG+GGG | + | chr8_3:53198965-53198984 | Msa1295160:CDS | 45.0% | |
| TTTCCCCTTGAACCTGTCAA+AGG | - | chr8_3:53198971-53198990 | None:intergenic | 45.0% | |
| GGCCACGACTTAATATCACA+TGG | - | chr8_3:53197358-53197377 | None:intergenic | 45.0% | |
| AAGACGTGTCCAACATGTGT+CGG | + | chr8_3:53197448-53197467 | Msa1295160:intron | 45.0% | |
| TATCTGACACCGACACATGT+TGG | - | chr8_3:53197460-53197479 | None:intergenic | 45.0% | |
| CCTCTAGCTGAATTACGGTT+AGG | - | chr8_3:53197610-53197629 | None:intergenic | 45.0% | |
| CCTAACCGTAATTCAGCTAG+AGG | + | chr8_3:53197607-53197626 | Msa1295160:CDS | 45.0% | |
| TCAGCACAAGACACTGTATG+AGG | - | chr8_3:53197679-53197698 | None:intergenic | 45.0% | |
| ! | AGTGTCTTGTGCTGACATTC+TGG | + | chr8_3:53197684-53197703 | Msa1295160:CDS | 45.0% |
| ! | ACTCCCTTTTATGTGTAGGC+TGG | + | chr8_3:53197949-53197968 | Msa1295160:intron | 45.0% |
| CCACCAGCCTACACATAAAA+GGG | - | chr8_3:53197955-53197974 | None:intergenic | 45.0% | |
| TCCACCAGCCTACACATAAA+AGG | - | chr8_3:53197956-53197975 | None:intergenic | 45.0% | |
| TCACTAGGTGCAAGCTTAAG+TGG | + | chr8_3:53198009-53198028 | Msa1295160:CDS | 45.0% | |
| CATTGGTGTATGTCAGTCCA+TGG | - | chr8_3:53198393-53198412 | None:intergenic | 45.0% | |
| TGTAAAGGGAGCCACACTAT+AGG | + | chr8_3:53198605-53198624 | Msa1295160:intron | 45.0% | |
| GCCACACTATAGGAAAGTCA+AGG | + | chr8_3:53198615-53198634 | Msa1295160:CDS | 45.0% | |
| GTAGAGTCTTTGCCTAAAGC+TGG | - | chr8_3:53198645-53198664 | None:intergenic | 45.0% | |
| ! | CTTGCTTGCCATTTCCAGTT+TGG | - | chr8_3:53198670-53198689 | None:intergenic | 45.0% |
| CGCACTCAATGTCCAAAATC+TGG | + | chr8_3:53198725-53198744 | Msa1295160:CDS | 45.0% | |
| CGCGAAGTCTATGATCAAGA+TGG | + | chr8_3:53198934-53198953 | Msa1295160:CDS | 45.0% | |
| TCTCCTTTGACAGGTTCAAG+GGG | + | chr8_3:53198965-53198984 | Msa1295160:CDS | 45.0% | |
| TTTCCCCTTGAACCTGTCAA+AGG | - | chr8_3:53198971-53198990 | None:intergenic | 45.0% | |
| AGGTTCCTTTGCAACAGCGT+TGG | - | chr8_3:53197256-53197275 | None:intergenic | 50.0% | |
| ! | CCCTTTTATGTGTAGGCTGG+TGG | + | chr8_3:53197952-53197971 | Msa1295160:intron | 50.0% |
| AGTGAGTCTCTTCTGCCTAG+AGG | - | chr8_3:53197994-53198013 | None:intergenic | 50.0% | |
| CTAGGCAGAAGAGACTCACT+AGG | + | chr8_3:53197994-53198013 | Msa1295160:CDS | 50.0% | |
| TGGGGCTGGAATGTTGTTGT+TGG | - | chr8_3:53198037-53198056 | None:intergenic | 50.0% | |
| !! | TGGAATGTGTTGTTTGGGGC+TGG | - | chr8_3:53198051-53198070 | None:intergenic | 50.0% |
| AGTCAAGGTGCACCAGCTTT+AGG | + | chr8_3:53198630-53198649 | Msa1295160:CDS | 50.0% | |
| AGGTTCCTTTGCAACAGCGT+TGG | - | chr8_3:53197256-53197275 | None:intergenic | 50.0% | |
| ! | CCCTTTTATGTGTAGGCTGG+TGG | + | chr8_3:53197952-53197971 | Msa1295160:intron | 50.0% |
| AGTGAGTCTCTTCTGCCTAG+AGG | - | chr8_3:53197994-53198013 | None:intergenic | 50.0% | |
| CTAGGCAGAAGAGACTCACT+AGG | + | chr8_3:53197994-53198013 | Msa1295160:CDS | 50.0% | |
| TGGGGCTGGAATGTTGTTGT+TGG | - | chr8_3:53198037-53198056 | None:intergenic | 50.0% | |
| !! | TGGAATGTGTTGTTTGGGGC+TGG | - | chr8_3:53198051-53198070 | None:intergenic | 50.0% |
| AGTCAAGGTGCACCAGCTTT+AGG | + | chr8_3:53198630-53198649 | Msa1295160:CDS | 50.0% | |
| !! | TGCAACAGCGTTGGCAAGGA+TGG | - | chr8_3:53197247-53197266 | None:intergenic | 55.0% |
| !! | CCTTTGCAACAGCGTTGGCA+AGG | - | chr8_3:53197251-53197270 | None:intergenic | 55.0% |
| CCTTGCCAACGCTGTTGCAA+AGG | + | chr8_3:53197248-53197267 | Msa1295160:CDS | 55.0% | |
| ! | TGTAGGCTGGTGGACCAAAC+TGG | + | chr8_3:53197962-53197981 | Msa1295160:intron | 55.0% |
| ! | GTAGGCTGGTGGACCAAACT+GGG | + | chr8_3:53197963-53197982 | Msa1295160:intron | 55.0% |
| !! | CCTAGAGGCACTTCCCAGTT+TGG | - | chr8_3:53197979-53197998 | None:intergenic | 55.0% |
| !! | CCAAACTGGGAAGTGCCTCT+AGG | + | chr8_3:53197976-53197995 | Msa1295160:CDS | 55.0% |
| !! | TGCAACAGCGTTGGCAAGGA+TGG | - | chr8_3:53197247-53197266 | None:intergenic | 55.0% |
| !! | CCTTTGCAACAGCGTTGGCA+AGG | - | chr8_3:53197251-53197270 | None:intergenic | 55.0% |
| CCTTGCCAACGCTGTTGCAA+AGG | + | chr8_3:53197248-53197267 | Msa1295160:CDS | 55.0% | |
| ! | TGTAGGCTGGTGGACCAAAC+TGG | + | chr8_3:53197962-53197981 | Msa1295160:intron | 55.0% |
| ! | GTAGGCTGGTGGACCAAACT+GGG | + | chr8_3:53197963-53197982 | Msa1295160:intron | 55.0% |
| !! | CCTAGAGGCACTTCCCAGTT+TGG | - | chr8_3:53197979-53197998 | None:intergenic | 55.0% |
| !! | CCAAACTGGGAAGTGCCTCT+AGG | + | chr8_3:53197976-53197995 | Msa1295160:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 53197023 | 53199089 | 53197023 | ID=Msa1295160;Name=Msa1295160 |
| chr8_3 | mRNA | 53197023 | 53199089 | 53197023 | ID=Msa1295160-mRNA-1;Parent=Msa1295160;Name=Msa1295160-mRNA-1;_AED=0.05;_eAED=0.05;_QI=79|1|1|1|1|1|4|62|332 |
| chr8_3 | exon | 53197023 | 53197326 | 53197023 | ID=Msa1295160-mRNA-1:exon:15221;Parent=Msa1295160-mRNA-1 |
| chr8_3 | exon | 53197544 | 53197735 | 53197544 | ID=Msa1295160-mRNA-1:exon:15222;Parent=Msa1295160-mRNA-1 |
| chr8_3 | exon | 53197967 | 53198132 | 53197967 | ID=Msa1295160-mRNA-1:exon:15223;Parent=Msa1295160-mRNA-1 |
| chr8_3 | exon | 53198612 | 53199089 | 53198612 | ID=Msa1295160-mRNA-1:exon:15224;Parent=Msa1295160-mRNA-1 |
| chr8_3 | five_prime_UTR | 53197023 | 53197101 | 53197023 | ID=Msa1295160-mRNA-1:five_prime_utr;Parent=Msa1295160-mRNA-1 |
| chr8_3 | CDS | 53197102 | 53197326 | 53197102 | ID=Msa1295160-mRNA-1:cds;Parent=Msa1295160-mRNA-1 |
| chr8_3 | CDS | 53197544 | 53197735 | 53197544 | ID=Msa1295160-mRNA-1:cds;Parent=Msa1295160-mRNA-1 |
| chr8_3 | CDS | 53197967 | 53198132 | 53197967 | ID=Msa1295160-mRNA-1:cds;Parent=Msa1295160-mRNA-1 |
| chr8_3 | CDS | 53198612 | 53199027 | 53198612 | ID=Msa1295160-mRNA-1:cds;Parent=Msa1295160-mRNA-1 |
| chr8_3 | three_prime_UTR | 53199028 | 53199089 | 53199028 | ID=Msa1295160-mRNA-1:three_prime_utr;Parent=Msa1295160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
