Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415100 | XP_024635738.1 | 90.446 | 157 | 10 | 1 | 1 | 152 | 24 | 180 | 4.91e-99 | 292 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415100 | sp|F4KEV7|FHIT_ARATH | 61.333 | 150 | 53 | 1 | 6 | 150 | 28 | 177 | 1.71e-60 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415100 | A0A072UY82 | 88.820 | 161 | 9 | 2 | 1 | 152 | 1 | 161 | 5.30e-99 | 291 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0415100 | -0.813957 | 1.967438e-51 | -8.615850e-47 |
| Msa0004180 | Msa0415100 | -0.809314 | 2.012012e-50 | -8.615850e-47 |
| Msa0009640 | Msa0415100 | 0.815043 | 1.131584e-51 | -8.615850e-47 |
| Msa0011410 | Msa0415100 | -0.808917 | 2.447001e-50 | -8.615850e-47 |
| Msa0011440 | Msa0415100 | -0.815097 | 1.100843e-51 | -8.615850e-47 |
| Msa0011450 | Msa0415100 | -0.844906 | 5.655657e-59 | -8.615850e-47 |
| Msa0015960 | Msa0415100 | 0.800457 | 1.428521e-48 | -8.615850e-47 |
| Msa0027020 | Msa0415100 | -0.807444 | 5.039615e-50 | -8.615850e-47 |
| Msa0030700 | Msa0415100 | 0.811655 | 6.281233e-51 | -8.615850e-47 |
| Msa0047660 | Msa0415100 | -0.828666 | 7.919558e-55 | -8.615850e-47 |
| Msa0065670 | Msa0415100 | -0.814788 | 1.289036e-51 | -8.615850e-47 |
| Msa0070120 | Msa0415100 | 0.805828 | 1.105579e-49 | -8.615850e-47 |
| Msa0078120 | Msa0415100 | 0.800376 | 1.483411e-48 | -8.615850e-47 |
| Msa0090090 | Msa0415100 | 0.806895 | 6.587130e-50 | -8.615850e-47 |
| Msa0094170 | Msa0415100 | -0.800183 | 1.624412e-48 | -8.615850e-47 |
| Msa0095810 | Msa0415100 | -0.812838 | 3.466656e-51 | -8.615850e-47 |
| Msa0095940 | Msa0415100 | 0.812503 | 4.102356e-51 | -8.615850e-47 |
| Msa0105140 | Msa0415100 | -0.811438 | 7.000154e-51 | -8.615850e-47 |
| Msa0111110 | Msa0415100 | -0.814835 | 1.258578e-51 | -8.615850e-47 |
| Msa0112550 | Msa0415100 | -0.800758 | 1.240377e-48 | -8.615850e-47 |
| Msa0120100 | Msa0415100 | -0.805357 | 1.388027e-49 | -8.615850e-47 |
| Msa0120160 | Msa0415100 | -0.814270 | 1.677732e-51 | -8.615850e-47 |
| Msa0126000 | Msa0415100 | -0.808757 | 2.647030e-50 | -8.615850e-47 |
| Msa0137560 | Msa0415100 | 0.814028 | 1.897416e-51 | -8.615850e-47 |
| Msa0139680 | Msa0415100 | 0.822623 | 2.145786e-53 | -8.615850e-47 |
| Msa0150620 | Msa0415100 | 0.802706 | 4.940819e-49 | -8.615850e-47 |
| Msa0151380 | Msa0415100 | -0.821386 | 4.151632e-53 | -8.615850e-47 |
| Msa0151510 | Msa0415100 | -0.820006 | 8.612517e-53 | -8.615850e-47 |
| Msa0158890 | Msa0415100 | -0.809521 | 1.816168e-50 | -8.615850e-47 |
| Msa0162170 | Msa0415100 | -0.801258 | 9.802173e-49 | -8.615850e-47 |
| Msa0164490 | Msa0415100 | 0.968322 | 1.636938e-128 | -8.615850e-47 |
| Msa0167160 | Msa0415100 | -0.807848 | 4.136235e-50 | -8.615850e-47 |
| Msa0167570 | Msa0415100 | -0.831172 | 1.940881e-55 | -8.615850e-47 |
| Msa0168770 | Msa0415100 | -0.809843 | 1.548890e-50 | -8.615850e-47 |
| Msa0170630 | Msa0415100 | 0.825643 | 4.191241e-54 | -8.615850e-47 |
| Msa0171330 | Msa0415100 | 0.803102 | 4.092081e-49 | -8.615850e-47 |
| Msa0183390 | Msa0415100 | 0.809821 | 1.565179e-50 | -8.615850e-47 |
| Msa0204140 | Msa0415100 | 0.802572 | 5.263746e-49 | -8.615850e-47 |
| Msa0211590 | Msa0415100 | -0.810376 | 1.188884e-50 | -8.615850e-47 |
| Msa0217060 | Msa0415100 | 0.812044 | 5.167026e-51 | -8.615850e-47 |
| Msa0225190 | Msa0415100 | -0.841039 | 6.051661e-58 | -8.615850e-47 |
| Msa0225790 | Msa0415100 | -0.803364 | 3.611545e-49 | -8.615850e-47 |
| Msa0229100 | Msa0415100 | 0.827144 | 1.839896e-54 | -8.615850e-47 |
| Msa0386230 | Msa0415100 | -0.802251 | 6.131200e-49 | -8.615850e-47 |
| Msa0388070 | Msa0415100 | 0.809653 | 1.701627e-50 | -8.615850e-47 |
| Msa0397420 | Msa0415100 | -0.808428 | 3.112245e-50 | -8.615850e-47 |
| Msa0415100 | Msa0415640 | 0.807311 | 5.376973e-50 | -8.615850e-47 |
| Msa0415100 | Msa0419150 | -0.800260 | 1.566675e-48 | -8.615850e-47 |
| Msa0415100 | Msa0436660 | -0.800029 | 1.745240e-48 | -8.615850e-47 |
| Msa0415100 | Msa0444770 | -0.814313 | 1.641923e-51 | -8.615850e-47 |
| Msa0415100 | Msa0474660 | -0.808874 | 2.499456e-50 | -8.615850e-47 |
| Msa0415100 | Msa0476890 | -0.822047 | 2.918428e-53 | -8.615850e-47 |
| Msa0415100 | Msa0506700 | -0.801312 | 9.553792e-49 | -8.615850e-47 |
| Msa0415100 | Msa0531050 | 0.803184 | 3.934057e-49 | -8.615850e-47 |
| Msa0415100 | Msa0534610 | 0.800560 | 1.361070e-48 | -8.615850e-47 |
| Msa0415100 | Msa0535400 | 0.817738 | 2.821461e-52 | -8.615850e-47 |
| Msa0415100 | Msa0548410 | 0.802023 | 6.829163e-49 | -8.615850e-47 |
| Msa0415100 | Msa0550990 | -0.823502 | 1.338412e-53 | -8.615850e-47 |
| Msa0415100 | Msa0557440 | -0.801272 | 9.738033e-49 | -8.615850e-47 |
| Msa0415100 | Msa0561450 | -0.802028 | 6.813842e-49 | -8.615850e-47 |
| Msa0415100 | Msa0566280 | 0.802506 | 5.431424e-49 | -8.615850e-47 |
| Msa0415100 | Msa0577490 | 0.834192 | 3.454110e-56 | -8.615850e-47 |
| Msa0415100 | Msa0580890 | -0.805396 | 1.362392e-49 | -8.615850e-47 |
| Msa0415100 | Msa0590620 | -0.806793 | 6.921602e-50 | -8.615850e-47 |
| Msa0415100 | Msa0590810 | 0.818456 | 1.941577e-52 | -8.615850e-47 |
| Msa0415100 | Msa0597180 | 0.824761 | 6.774754e-54 | -8.615850e-47 |
| Msa0415100 | Msa0597370 | -0.805170 | 1.519333e-49 | -8.615850e-47 |
| Msa0415100 | Msa0603310 | 0.800962 | 1.126856e-48 | -8.615850e-47 |
| Msa0415100 | Msa0606340 | -0.811358 | 7.285026e-51 | -8.615850e-47 |
| Msa0415100 | Msa0606350 | -0.806745 | 7.085558e-50 | -8.615850e-47 |
| Msa0415100 | Msa0611060 | 0.819833 | 9.434404e-53 | -8.615850e-47 |
| Msa0415100 | Msa0619030 | -0.805085 | 1.582738e-49 | -8.615850e-47 |
| Msa0415100 | Msa0631130 | 0.819422 | 1.171279e-52 | -8.615850e-47 |
| Msa0415100 | Msa0637590 | 0.805297 | 1.429151e-49 | -8.615850e-47 |
| Msa0415100 | Msa0649160 | -0.811482 | 6.850095e-51 | -8.615850e-47 |
| Msa0415100 | Msa0654850 | -0.808518 | 2.977734e-50 | -8.615850e-47 |
| Msa0415100 | Msa0657720 | 0.808409 | 3.141490e-50 | -8.615850e-47 |
| Msa0415100 | Msa0658190 | 0.813450 | 2.544638e-51 | -8.615850e-47 |
| Msa0415100 | Msa0666640 | 0.810721 | 1.001456e-50 | -8.615850e-47 |
| Msa0415100 | Msa0666950 | 0.803384 | 3.576970e-49 | -8.615850e-47 |
| Msa0415100 | Msa0669350 | 0.806157 | 9.427454e-50 | -8.615850e-47 |
| Msa0415100 | Msa0684130 | 0.814324 | 1.633002e-51 | -8.615850e-47 |
| Msa0415100 | Msa0691320 | -0.817242 | 3.650155e-52 | -8.615850e-47 |
| Msa0415100 | Msa0695250 | -0.818399 | 1.999942e-52 | -8.615850e-47 |
| Msa0415100 | Msa0709140 | 0.824124 | 9.566211e-54 | -8.615850e-47 |
| Msa0415100 | Msa0712880 | 0.808760 | 2.643427e-50 | -8.615850e-47 |
| Msa0415100 | Msa0725580 | 0.830076 | 3.600115e-55 | -8.615850e-47 |
| Msa0415100 | Msa0729740 | -0.801509 | 8.708982e-49 | -8.615850e-47 |
| Msa0415100 | Msa0744640 | 0.806521 | 7.900549e-50 | -8.615850e-47 |
| Msa0415100 | Msa0753590 | -0.812537 | 4.032598e-51 | -8.615850e-47 |
| Msa0415100 | Msa0766170 | 0.803617 | 3.200209e-49 | -8.615850e-47 |
| Msa0415100 | Msa0778570 | 0.802552 | 5.314774e-49 | -8.615850e-47 |
| Msa0415100 | Msa0788450 | -0.815592 | 8.543290e-52 | -8.615850e-47 |
| Msa0415100 | Msa0800150 | 0.817358 | 3.436941e-52 | -8.615850e-47 |
| Msa0415100 | Msa0800180 | 0.809512 | 1.823919e-50 | -8.615850e-47 |
| Msa0415100 | Msa0810330 | 0.809892 | 1.511379e-50 | -8.615850e-47 |
| Msa0415100 | Msa0820130 | -0.804968 | 1.674056e-49 | -8.615850e-47 |
| Msa0415100 | Msa0825570 | -0.814940 | 1.192815e-51 | -8.615850e-47 |
| Msa0415100 | Msa0826540 | -0.821208 | 4.561558e-53 | -8.615850e-47 |
| Msa0415100 | Msa0828950 | 0.800325 | 1.519348e-48 | -8.615850e-47 |
| Msa0415100 | Msa0829210 | -0.816792 | 4.607630e-52 | -8.615850e-47 |
| Msa0415100 | Msa0829250 | -0.816996 | 4.145087e-52 | -8.615850e-47 |
| Msa0415100 | Msa0833270 | 0.819097 | 1.388688e-52 | -8.615850e-47 |
| Msa0415100 | Msa0841730 | 0.806786 | 6.947356e-50 | -8.615850e-47 |
| Msa0415100 | Msa0845670 | 0.800030 | 1.744508e-48 | -8.615850e-47 |
| Msa0415100 | Msa0850640 | 0.807058 | 6.084392e-50 | -8.615850e-47 |
| Msa0415100 | Msa0853200 | -0.804868 | 1.756660e-49 | -8.615850e-47 |
| Msa0415100 | Msa0864820 | -0.812568 | 3.971365e-51 | -8.615850e-47 |
| Msa0415100 | Msa0868500 | -0.813994 | 1.931090e-51 | -8.615850e-47 |
| Msa0415100 | Msa0868510 | -0.812102 | 5.019950e-51 | -8.615850e-47 |
| Msa0415100 | Msa0869420 | -0.808992 | 2.358527e-50 | -8.615850e-47 |
| Msa0415100 | Msa0879930 | 0.816928 | 4.294277e-52 | -8.615850e-47 |
| Msa0415100 | Msa0882480 | -0.835137 | 1.998415e-56 | -8.615850e-47 |
| Msa0415100 | Msa0896930 | 0.828638 | 8.045889e-55 | -8.615850e-47 |
| Msa0415100 | Msa0905570 | 0.812891 | 3.374917e-51 | -8.615850e-47 |
| Msa0415100 | Msa0907880 | 0.805435 | 1.336616e-49 | -8.615850e-47 |
| Msa0415100 | Msa0919120 | -0.825782 | 3.884209e-54 | -8.615850e-47 |
| Msa0415100 | Msa0925940 | 0.819448 | 1.155173e-52 | -8.615850e-47 |
| Msa0415100 | Msa0930270 | 0.805447 | 1.329329e-49 | -8.615850e-47 |
| Msa0415100 | Msa0945160 | -0.819012 | 1.451763e-52 | -8.615850e-47 |
| Msa0415100 | Msa0958960 | -0.801668 | 8.076974e-49 | -8.615850e-47 |
| Msa0415100 | Msa0966580 | 0.857256 | 1.847553e-62 | -8.615850e-47 |
| Msa0415100 | Msa0971690 | -0.814737 | 1.322762e-51 | -8.615850e-47 |
| Msa0415100 | Msa0978540 | -0.805916 | 1.059693e-49 | -8.615850e-47 |
| Msa0415100 | Msa0978550 | -0.813434 | 2.564731e-51 | -8.615850e-47 |
| Msa0415100 | Msa1001120 | 0.810029 | 1.412067e-50 | -8.615850e-47 |
| Msa0415100 | Msa1002550 | -0.825150 | 5.482123e-54 | -8.615850e-47 |
| Msa0415100 | Msa1007900 | 0.810782 | 9.715119e-51 | -8.615850e-47 |
| Msa0415100 | Msa1031190 | -0.812884 | 3.385690e-51 | -8.615850e-47 |
| Msa0415100 | Msa1035050 | 0.827205 | 1.779483e-54 | -8.615850e-47 |
| Msa0415100 | Msa1058550 | -0.817459 | 3.261073e-52 | -8.615850e-47 |
| Msa0415100 | Msa1070370 | -0.812164 | 4.865935e-51 | -8.615850e-47 |
| Msa0415100 | Msa1075090 | 0.823420 | 1.398615e-53 | -8.615850e-47 |
| Msa0415100 | Msa1080610 | -0.801283 | 9.685864e-49 | -8.615850e-47 |
| Msa0415100 | Msa1080680 | -0.801075 | 1.068133e-48 | -8.615850e-47 |
| Msa0415100 | Msa1086490 | -0.800165 | 1.637956e-48 | -8.615850e-47 |
| Msa0415100 | Msa1086670 | -0.810500 | 1.117888e-50 | -8.615850e-47 |
| Msa0415100 | Msa1092310 | 0.869822 | 2.321521e-66 | -8.615850e-47 |
| Msa0415100 | Msa1107220 | 0.834152 | 3.534938e-56 | -8.615850e-47 |
| Msa0415100 | Msa1114670 | 0.830037 | 3.680527e-55 | -8.615850e-47 |
| Msa0415100 | Msa1115980 | 0.814697 | 1.350107e-51 | -8.615850e-47 |
| Msa0415100 | Msa1116840 | 0.828556 | 8.418772e-55 | -8.615850e-47 |
| Msa0415100 | Msa1119420 | -0.810390 | 1.180682e-50 | -8.615850e-47 |
| Msa0415100 | Msa1120580 | 0.809301 | 2.024582e-50 | -8.615850e-47 |
| Msa0415100 | Msa1126320 | -0.816470 | 5.440878e-52 | -8.615850e-47 |
| Msa0415100 | Msa1128520 | -0.800233 | 1.586319e-48 | -8.615850e-47 |
| Msa0415100 | Msa1130150 | -0.835209 | 1.916715e-56 | -8.615850e-47 |
| Msa0415100 | Msa1136760 | 0.847811 | 9.133071e-60 | -8.615850e-47 |
| Msa0415100 | Msa1150760 | 0.812848 | 3.448412e-51 | -8.615850e-47 |
| Msa0415100 | Msa1156100 | -0.820063 | 8.361979e-53 | -8.615850e-47 |
| Msa0415100 | Msa1157110 | 0.812987 | 3.214380e-51 | -8.615850e-47 |
| Msa0415100 | Msa1158180 | -0.810686 | 1.018866e-50 | -8.615850e-47 |
| Msa0415100 | Msa1159170 | 0.838305 | 3.111410e-57 | -8.615850e-47 |
| Msa0415100 | Msa1167150 | -0.801240 | 9.884410e-49 | -8.615850e-47 |
| Msa0415100 | Msa1197740 | -0.822972 | 1.779036e-53 | -8.615850e-47 |
| Msa0415100 | Msa1202110 | 0.811027 | 8.598089e-51 | -8.615850e-47 |
| Msa0415100 | Msa1202800 | 0.805431 | 1.339512e-49 | -8.615850e-47 |
| Msa0415100 | Msa1212150 | -0.800333 | 1.513660e-48 | -8.615850e-47 |
| Msa0415100 | Msa1235620 | -0.805272 | 1.446022e-49 | -8.615850e-47 |
| Msa0415100 | Msa1239210 | 0.800097 | 1.691054e-48 | -8.615850e-47 |
| Msa0415100 | Msa1251440 | -0.820983 | 5.140935e-53 | -8.615850e-47 |
| Msa0415100 | Msa1254870 | 0.809243 | 2.083519e-50 | -8.615850e-47 |
| Msa0415100 | Msa1255210 | 0.804955 | 1.684916e-49 | -8.615850e-47 |
| Msa0415100 | Msa1256060 | 0.800912 | 1.153385e-48 | -8.615850e-47 |
| Msa0415100 | Msa1268360 | 0.801088 | 1.061951e-48 | -8.615850e-47 |
| Msa0415100 | Msa1268390 | 0.810610 | 1.058061e-50 | -8.615850e-47 |
| Msa0415100 | Msa1268420 | 0.802662 | 5.044371e-49 | -8.615850e-47 |
| Msa0415100 | Msa1269200 | 0.812109 | 5.000958e-51 | -8.615850e-47 |
| Msa0415100 | Msa1276960 | 0.821250 | 4.461936e-53 | -8.615850e-47 |
| Msa0415100 | Msa1281690 | 0.802543 | 5.336829e-49 | -8.615850e-47 |
| Msa0415100 | Msa1287100 | -0.810677 | 1.023362e-50 | -8.615850e-47 |
| Msa0415100 | Msa1295650 | 0.803652 | 3.147505e-49 | -8.615850e-47 |
| Msa0415100 | Msa1303690 | -0.805954 | 1.040239e-49 | -8.615850e-47 |
| Msa0415100 | Msa1306830 | 0.817961 | 2.512756e-52 | -8.615850e-47 |
| Msa0415100 | Msa1307530 | 0.826646 | 2.420236e-54 | -8.615850e-47 |
| Msa0415100 | Msa1328430 | 0.811512 | 6.746181e-51 | -8.615850e-47 |
| Msa0415100 | Msa1341710 | -0.804810 | 1.806583e-49 | -8.615850e-47 |
| Msa0415100 | Msa1361230 | 0.802420 | 5.659123e-49 | -8.615850e-47 |
| Msa0415100 | Msa1362850 | 0.806669 | 7.351748e-50 | -8.615850e-47 |
| Msa0415100 | Msa1363170 | -0.804762 | 1.848650e-49 | -8.615850e-47 |
| Msa0415100 | Msa1367790 | 0.807236 | 5.577309e-50 | -8.615850e-47 |
| Msa0415100 | Msa1386910 | -0.804569 | 2.028075e-49 | -8.615850e-47 |
| Msa0415100 | Msa1398140 | 0.831944 | 1.252152e-55 | -8.615850e-47 |
| Msa0415100 | Msa1404050 | 0.807614 | 4.637666e-50 | -8.615850e-47 |
| Msa0415100 | Msa1405040 | -0.803211 | 3.884120e-49 | -8.615850e-47 |
| Msa0415100 | Msa1405530 | 0.815607 | 8.479514e-52 | -8.615850e-47 |
| Msa0415100 | Msa1408230 | -0.805463 | 1.318965e-49 | -8.615850e-47 |
| Msa0415100 | Msa1415510 | -0.812408 | 4.303416e-51 | -8.615850e-47 |
| Msa0415100 | Msa1433360 | 0.803234 | 3.842862e-49 | -8.615850e-47 |
| Msa0415100 | Msa1444770 | -0.814998 | 1.157774e-51 | -8.615850e-47 |
| Msa0415100 | Msa1447870 | 0.805309 | 1.420555e-49 | -8.615850e-47 |
| Msa0415100 | Msa1455200 | 0.826847 | 2.167340e-54 | -8.615850e-47 |
| Msa0415100 | Msa1462700 | -0.806539 | 7.833476e-50 | -8.615850e-47 |
| Msa0241750 | Msa0415100 | 0.807416 | 5.108698e-50 | -8.615850e-47 |
| Msa0260580 | Msa0415100 | -0.805638 | 1.211821e-49 | -8.615850e-47 |
| Msa0261350 | Msa0415100 | -0.815668 | 8.216761e-52 | -8.615850e-47 |
| Msa0262350 | Msa0415100 | -0.838840 | 2.263863e-57 | -8.615850e-47 |
| Msa0266330 | Msa0415100 | -0.801059 | 1.076443e-48 | -8.615850e-47 |
| Msa0268660 | Msa0415100 | -0.802055 | 6.725781e-49 | -8.615850e-47 |
| Msa0285890 | Msa0415100 | 0.832618 | 8.528361e-56 | -8.615850e-47 |
| Msa0287480 | Msa0415100 | 0.805132 | 1.546933e-49 | -8.615850e-47 |
| Msa0293060 | Msa0415100 | -0.803320 | 3.688701e-49 | -8.615850e-47 |
| Msa0298820 | Msa0415100 | -0.800675 | 1.289284e-48 | -8.615850e-47 |
| Msa0299130 | Msa0415100 | -0.812151 | 4.896982e-51 | -8.615850e-47 |
| Msa0300130 | Msa0415100 | -0.826388 | 2.787530e-54 | -8.615850e-47 |
| Msa0308470 | Msa0415100 | 0.803314 | 3.698412e-49 | -8.615850e-47 |
| Msa0320170 | Msa0415100 | 0.800567 | 1.356584e-48 | -8.615850e-47 |
| Msa0335080 | Msa0415100 | 0.809067 | 2.272107e-50 | -8.615850e-47 |
| Msa0340700 | Msa0415100 | -0.816326 | 5.857240e-52 | -8.615850e-47 |
| Msa0345890 | Msa0415100 | 0.802702 | 4.949892e-49 | -8.615850e-47 |
| Msa0349950 | Msa0415100 | 0.802385 | 5.752643e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415100 | MtrunA17_Chr3g0108841 | 84.375 | 128 | 20 | 0 | 25 | 152 | 25 | 152 | 3.43e-78 | 228 |
| Msa0415100 | MtrunA17_Chr3g0108711 | 85.088 | 114 | 12 | 2 | 40 | 152 | 40 | 149 | 1.61e-64 | 194 |
| Msa0415100 | MtrunA17_Chr3g0108701 | 68.293 | 82 | 26 | 0 | 71 | 152 | 42 | 123 | 1.95e-26 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415100 | AT5G58240.2 | 61.333 | 150 | 53 | 1 | 6 | 150 | 8 | 157 | 1.41e-61 | 187 |
| Msa0415100 | AT5G58240.1 | 61.333 | 150 | 53 | 1 | 6 | 150 | 28 | 177 | 1.74e-61 | 187 |
| Msa0415100 | AT5G58240.3 | 66.667 | 111 | 37 | 0 | 40 | 150 | 15 | 125 | 2.04e-50 | 157 |
Find 35 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTTGTTTATTTACCTTAA+TGG | 0.217298 | 3_2:-61140238 | None:intergenic |
| CTCCTCTACTCACTCCATTA+AGG | 0.247889 | 3_2:+61140224 | Msa0415100:five_prime_UTR |
| ATGATGAGAACATTGATTTA+TGG | 0.249450 | 3_2:+61141513 | Msa0415100:CDS |
| GGTTCCTATTATATGGAAAT+TGG | 0.256727 | 3_2:+61142158 | Msa0415100:three_prime_UTR |
| GTTACGAGGTTCCTATTATA+TGG | 0.260592 | 3_2:+61142151 | Msa0415100:three_prime_UTR |
| CCTCTTGTGCCATTTCTTCA+AGG | 0.271826 | 3_2:-61142030 | None:intergenic |
| ACTTCCAATTTCCATATAAT+AGG | 0.283567 | 3_2:-61142162 | None:intergenic |
| GCTGTAGAATACTATGATTT+TGG | 0.298663 | 3_2:+61140347 | Msa0415100:CDS |
| CAATGATGACATTTATGATT+TGG | 0.306333 | 3_2:+61141840 | Msa0415100:CDS |
| AATGAAAATATTGATAATAA+AGG | 0.348812 | 3_2:+61142102 | Msa0415100:three_prime_UTR |
| TGGATTTAGAGAGGAAAGAT+AGG | 0.366670 | 3_2:+61142005 | Msa0415100:CDS |
| AGATAGGAGCCTTGAAGAAA+TGG | 0.398545 | 3_2:+61142021 | Msa0415100:CDS |
| ATATTGATAATAAAGGAATA+AGG | 0.418866 | 3_2:+61142109 | Msa0415100:three_prime_UTR |
| TATGTTTCTTACGGTAGCTT+TGG | 0.426990 | 3_2:+61142185 | Msa0415100:three_prime_UTR |
| ATGTAAGTGATGATGCATTA+TGG | 0.441950 | 3_2:-61141574 | None:intergenic |
| ATTGGAAGTTATGTTTCTTA+CGG | 0.470193 | 3_2:+61142176 | Msa0415100:three_prime_UTR |
| TTGTATGAAACACTGAACTA+TGG | 0.490397 | 3_2:-61140385 | None:intergenic |
| AGAGATTTAGTAACTTTCAA+AGG | 0.503513 | 3_2:-61142075 | None:intergenic |
| AACCAGGATGGACCTCAAGC+TGG | 0.511868 | 3_2:+61141757 | Msa0415100:intron |
| AACCTGCGTCCTGCTGTCAC+TGG | 0.527066 | 3_2:+61140431 | Msa0415100:CDS |
| TTGTTCTTGTATACACATCA+AGG | 0.538035 | 3_2:+61140190 | Msa0415100:five_prime_UTR |
| TTCATATCCATATACTTCCT+CGG | 0.540594 | 3_2:+61141797 | Msa0415100:CDS |
| CCTTGAAGAAATGGCACAAG+AGG | 0.544026 | 3_2:+61142030 | Msa0415100:CDS |
| TGGCGCATAGCACATAAACT+TGG | 0.555803 | 3_2:+61141533 | Msa0415100:CDS |
| GACAAAGGCAAAAGAAAGAT+CGG | 0.560339 | 3_2:-61140408 | None:intergenic |
| TACCTTAATGGAGTGAGTAG+AGG | 0.565031 | 3_2:-61140226 | None:intergenic |
| AGCAAGATACCAGTGACAGC+AGG | 0.566014 | 3_2:-61140440 | None:intergenic |
| GGAACTGATTGTCCAGCTTG+AGG | 0.613109 | 3_2:-61141769 | None:intergenic |
| GTTGAAAAGTAAGCTAGCTG+TGG | 0.621405 | 3_2:+61141985 | Msa0415100:CDS |
| AGCTAGCTGTGGATTTAGAG+AGG | 0.624532 | 3_2:+61141996 | Msa0415100:CDS |
| AGCAGGACGCAGGTTGACAA+AGG | 0.629553 | 3_2:-61140423 | None:intergenic |
| TACCAGTGACAGCAGGACGC+AGG | 0.636751 | 3_2:-61140433 | None:intergenic |
| AGTATATGGATATGAACATG+AGG | 0.648556 | 3_2:-61141790 | None:intergenic |
| TGAAAACTTGTATAGTTACG+AGG | 0.671860 | 3_2:+61142137 | Msa0415100:three_prime_UTR |
| TATGAAACACTGAACTATGG+TGG | 0.696537 | 3_2:-61140382 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTCCTAAAATATTT+AGG | - | chr3_2:61140749-61140768 | None:intergenic | 10.0% |
| !!! | AATGAAAATATTGATAATAA+AGG | + | chr3_2:61142102-61142121 | Msa0415100:three_prime_UTR | 10.0% |
| !! | AAAAAATTCCTAAAATATTT+AGG | - | chr3_2:61140749-61140768 | None:intergenic | 10.0% |
| !!! | AATGAAAATATTGATAATAA+AGG | + | chr3_2:61142102-61142121 | Msa0415100:three_prime_UTR | 10.0% |
| !!! | AGATTAATGTTACTTTTATT+GGG | + | chr3_2:61140308-61140327 | Msa0415100:intron | 15.0% |
| !!! | AAAAAATGCCTAAATATTTT+AGG | + | chr3_2:61140738-61140757 | Msa0415100:intron | 15.0% |
| !! | AAAGAAAAAAATTATTGTGA+GGG | + | chr3_2:61141079-61141098 | Msa0415100:intron | 15.0% |
| !!! | TATTGTTATTTGAGTATATA+AGG | + | chr3_2:61141626-61141645 | Msa0415100:intron | 15.0% |
| !!! | CATTTGTGTTTTTAATAATT+TGG | + | chr3_2:61141873-61141892 | Msa0415100:intron | 15.0% |
| !! | CTAAAAATCAAGTAAAAATT+TGG | + | chr3_2:61141913-61141932 | Msa0415100:intron | 15.0% |
| !!! | ATATTGATAATAAAGGAATA+AGG | + | chr3_2:61142109-61142128 | Msa0415100:three_prime_UTR | 15.0% |
| !!! | AGATTAATGTTACTTTTATT+GGG | + | chr3_2:61140308-61140327 | Msa0415100:intron | 15.0% |
| !!! | AAAAAATGCCTAAATATTTT+AGG | + | chr3_2:61140738-61140757 | Msa0415100:intron | 15.0% |
| !! | AAAGAAAAAAATTATTGTGA+GGG | + | chr3_2:61141079-61141098 | Msa0415100:intron | 15.0% |
| !!! | TATTGTTATTTGAGTATATA+AGG | + | chr3_2:61141626-61141645 | Msa0415100:intron | 15.0% |
| !!! | CATTTGTGTTTTTAATAATT+TGG | + | chr3_2:61141873-61141892 | Msa0415100:intron | 15.0% |
| !! | CTAAAAATCAAGTAAAAATT+TGG | + | chr3_2:61141913-61141932 | Msa0415100:intron | 15.0% |
| !!! | ATATTGATAATAAAGGAATA+AGG | + | chr3_2:61142109-61142128 | Msa0415100:three_prime_UTR | 15.0% |
| !! | TAGTTGTTTATTTACCTTAA+TGG | - | chr3_2:61140241-61140260 | None:intergenic | 20.0% |
| !!! | AAGTTAACATTTGATGATTA+TGG | - | chr3_2:61140265-61140284 | None:intergenic | 20.0% |
| !! | AGTAACATTAATCTCATATA+TGG | - | chr3_2:61140302-61140321 | None:intergenic | 20.0% |
| !!! | GAGATTAATGTTACTTTTAT+TGG | + | chr3_2:61140307-61140326 | Msa0415100:intron | 20.0% |
| !!! | GATTAATGTTACTTTTATTG+GGG | + | chr3_2:61140309-61140328 | Msa0415100:intron | 20.0% |
| !!! | ATTAATGTTACTTTTATTGG+GGG | + | chr3_2:61140310-61140329 | Msa0415100:intron | 20.0% |
| !! | TTATTAACATCACACTAATA+AGG | - | chr3_2:61140558-61140577 | None:intergenic | 20.0% |
| !! | GTTAATCTATCGTTATAATA+TGG | + | chr3_2:61140823-61140842 | Msa0415100:intron | 20.0% |
| !! | TTTCTTTCTTTATAAACTAG+AGG | - | chr3_2:61141066-61141085 | None:intergenic | 20.0% |
| !! | GAAAGAAAAAAATTATTGTG+AGG | + | chr3_2:61141078-61141097 | Msa0415100:intron | 20.0% |
| !!! | ATTTTGTTAGAAATTTGTCT+GGG | + | chr3_2:61141245-61141264 | Msa0415100:intron | 20.0% |
| !!! | CTTTTAATGTAGAGTATATA+AGG | + | chr3_2:61141654-61141673 | Msa0415100:intron | 20.0% |
| !! | TAGTTGTTTATTTACCTTAA+TGG | - | chr3_2:61140241-61140260 | None:intergenic | 20.0% |
| !!! | AAGTTAACATTTGATGATTA+TGG | - | chr3_2:61140265-61140284 | None:intergenic | 20.0% |
| !! | AGTAACATTAATCTCATATA+TGG | - | chr3_2:61140302-61140321 | None:intergenic | 20.0% |
| !!! | GAGATTAATGTTACTTTTAT+TGG | + | chr3_2:61140307-61140326 | Msa0415100:intron | 20.0% |
| !!! | GATTAATGTTACTTTTATTG+GGG | + | chr3_2:61140309-61140328 | Msa0415100:intron | 20.0% |
| !!! | ATTAATGTTACTTTTATTGG+GGG | + | chr3_2:61140310-61140329 | Msa0415100:intron | 20.0% |
| !! | TTATTAACATCACACTAATA+AGG | - | chr3_2:61140558-61140577 | None:intergenic | 20.0% |
| !! | GTTAATCTATCGTTATAATA+TGG | + | chr3_2:61140823-61140842 | Msa0415100:intron | 20.0% |
| !! | TTTCTTTCTTTATAAACTAG+AGG | - | chr3_2:61141066-61141085 | None:intergenic | 20.0% |
| !! | GAAAGAAAAAAATTATTGTG+AGG | + | chr3_2:61141078-61141097 | Msa0415100:intron | 20.0% |
| !!! | ATTTTGTTAGAAATTTGTCT+GGG | + | chr3_2:61141245-61141264 | Msa0415100:intron | 20.0% |
| !!! | CTTTTAATGTAGAGTATATA+AGG | + | chr3_2:61141654-61141673 | Msa0415100:intron | 20.0% |
| !! | TTACAATTTGCATTTTGCTA+TGG | - | chr3_2:61140154-61140173 | None:intergenic | 25.0% |
| ! | GAGATTTAGATTTAGAGATA+TGG | + | chr3_2:61140773-61140792 | Msa0415100:intron | 25.0% |
| ! | TATGGAACATAGTAATACAT+AGG | + | chr3_2:61140791-61140810 | Msa0415100:intron | 25.0% |
| ! | ATGGAACATAGTAATACATA+GGG | + | chr3_2:61140792-61140811 | Msa0415100:intron | 25.0% |
| ! | AAAAGATAGCATCTCAATAT+AGG | + | chr3_2:61141151-61141170 | Msa0415100:intron | 25.0% |
| !! | CATTTTGTTAGAAATTTGTC+TGG | + | chr3_2:61141244-61141263 | Msa0415100:intron | 25.0% |
| ! | TCAAAACCTTAATATCATCA+CGG | + | chr3_2:61141342-61141361 | Msa0415100:intron | 25.0% |
| ! | AATGTAAACATGAATCTACT+TGG | + | chr3_2:61141394-61141413 | Msa0415100:intron | 25.0% |
| !!! | ATGATGAGAACATTGATTTA+TGG | + | chr3_2:61141513-61141532 | Msa0415100:CDS | 25.0% |
| ! | ATTCTTCAAATTGTCTTACT+TGG | - | chr3_2:61141607-61141626 | None:intergenic | 25.0% |
| ! | CAATGATGACATTTATGATT+TGG | + | chr3_2:61141840-61141859 | Msa0415100:CDS | 25.0% |
| ! | AGAGATTTAGTAACTTTCAA+AGG | - | chr3_2:61142078-61142097 | None:intergenic | 25.0% |
| ! | ACTTCCAATTTCCATATAAT+AGG | - | chr3_2:61142165-61142184 | None:intergenic | 25.0% |
| ! | ATTGGAAGTTATGTTTCTTA+CGG | + | chr3_2:61142176-61142195 | Msa0415100:three_prime_UTR | 25.0% |
| !! | TTACAATTTGCATTTTGCTA+TGG | - | chr3_2:61140154-61140173 | None:intergenic | 25.0% |
| ! | GAGATTTAGATTTAGAGATA+TGG | + | chr3_2:61140773-61140792 | Msa0415100:intron | 25.0% |
| ! | TATGGAACATAGTAATACAT+AGG | + | chr3_2:61140791-61140810 | Msa0415100:intron | 25.0% |
| ! | ATGGAACATAGTAATACATA+GGG | + | chr3_2:61140792-61140811 | Msa0415100:intron | 25.0% |
| ! | AAAAGATAGCATCTCAATAT+AGG | + | chr3_2:61141151-61141170 | Msa0415100:intron | 25.0% |
| !! | CATTTTGTTAGAAATTTGTC+TGG | + | chr3_2:61141244-61141263 | Msa0415100:intron | 25.0% |
| ! | TCAAAACCTTAATATCATCA+CGG | + | chr3_2:61141342-61141361 | Msa0415100:intron | 25.0% |
| ! | AATGTAAACATGAATCTACT+TGG | + | chr3_2:61141394-61141413 | Msa0415100:intron | 25.0% |
| !!! | ATGATGAGAACATTGATTTA+TGG | + | chr3_2:61141513-61141532 | Msa0415100:CDS | 25.0% |
| ! | ATTCTTCAAATTGTCTTACT+TGG | - | chr3_2:61141607-61141626 | None:intergenic | 25.0% |
| ! | CAATGATGACATTTATGATT+TGG | + | chr3_2:61141840-61141859 | Msa0415100:CDS | 25.0% |
| ! | AGAGATTTAGTAACTTTCAA+AGG | - | chr3_2:61142078-61142097 | None:intergenic | 25.0% |
| ! | ACTTCCAATTTCCATATAAT+AGG | - | chr3_2:61142165-61142184 | None:intergenic | 25.0% |
| ! | ATTGGAAGTTATGTTTCTTA+CGG | + | chr3_2:61142176-61142195 | Msa0415100:three_prime_UTR | 25.0% |
| TTGTTCTTGTATACACATCA+AGG | + | chr3_2:61140190-61140209 | Msa0415100:five_prime_UTR | 30.0% | |
| ! | GCTGTAGAATACTATGATTT+TGG | + | chr3_2:61140347-61140366 | Msa0415100:CDS | 30.0% |
| TTGTATGAAACACTGAACTA+TGG | - | chr3_2:61140388-61140407 | None:intergenic | 30.0% | |
| ATATGAGCAATAGATCAAAG+AGG | - | chr3_2:61140472-61140491 | None:intergenic | 30.0% | |
| ! | CTTTCCTTTTTATCTTTTGC+AGG | + | chr3_2:61140526-61140545 | Msa0415100:intron | 30.0% |
| ATGACCTGCAAAAGATAAAA+AGG | - | chr3_2:61140533-61140552 | None:intergenic | 30.0% | |
| AGTAATACATAGGGTAGTAA+TGG | + | chr3_2:61140801-61140820 | Msa0415100:intron | 30.0% | |
| ACAACAACATTTGATATGTC+CGG | + | chr3_2:61140888-61140907 | Msa0415100:intron | 30.0% | |
| ACAAAACAAGTGCTTAAAAG+TGG | - | chr3_2:61141035-61141054 | None:intergenic | 30.0% | |
| !!! | TTTTAAGCACTTGTTTTGTG+AGG | + | chr3_2:61141036-61141055 | Msa0415100:intron | 30.0% |
| ! | AATTGACACACTCTTTTGTT+AGG | + | chr3_2:61141105-61141124 | Msa0415100:intron | 30.0% |
| !!! | AGATGCTATCTTTTGAGTTT+GGG | - | chr3_2:61141145-61141164 | None:intergenic | 30.0% |
| GCTGTATTTGTAATCACATA+AGG | + | chr3_2:61141307-61141326 | Msa0415100:intron | 30.0% | |
| TTTGTAATCACATAAGGCTA+TGG | + | chr3_2:61141313-61141332 | Msa0415100:intron | 30.0% | |
| ! | ATGTAAGTGATGATGCATTA+TGG | - | chr3_2:61141577-61141596 | None:intergenic | 30.0% |
| ATTGTATAGCCATATAGCAT+TGG | - | chr3_2:61141708-61141727 | None:intergenic | 30.0% | |
| AGTATATGGATATGAACATG+AGG | - | chr3_2:61141793-61141812 | None:intergenic | 30.0% | |
| TTCATATCCATATACTTCCT+CGG | + | chr3_2:61141797-61141816 | Msa0415100:CDS | 30.0% | |
| !! | GATGACATTTATGATTTGGT+AGG | + | chr3_2:61141844-61141863 | Msa0415100:intron | 30.0% |
| !! | ACATTTATGATTTGGTAGGA+TGG | + | chr3_2:61141848-61141867 | Msa0415100:intron | 30.0% |
| GCAGATAAATGAAAAAGAGA+AGG | + | chr3_2:61141961-61141980 | Msa0415100:intron | 30.0% | |
| TGAAAACTTGTATAGTTACG+AGG | + | chr3_2:61142137-61142156 | Msa0415100:three_prime_UTR | 30.0% | |
| GGTTCCTATTATATGGAAAT+TGG | + | chr3_2:61142158-61142177 | Msa0415100:three_prime_UTR | 30.0% | |
| TTGTTCTTGTATACACATCA+AGG | + | chr3_2:61140190-61140209 | Msa0415100:five_prime_UTR | 30.0% | |
| ! | GCTGTAGAATACTATGATTT+TGG | + | chr3_2:61140347-61140366 | Msa0415100:CDS | 30.0% |
| TTGTATGAAACACTGAACTA+TGG | - | chr3_2:61140388-61140407 | None:intergenic | 30.0% | |
| ATATGAGCAATAGATCAAAG+AGG | - | chr3_2:61140472-61140491 | None:intergenic | 30.0% | |
| ! | CTTTCCTTTTTATCTTTTGC+AGG | + | chr3_2:61140526-61140545 | Msa0415100:intron | 30.0% |
| ATGACCTGCAAAAGATAAAA+AGG | - | chr3_2:61140533-61140552 | None:intergenic | 30.0% | |
| AGTAATACATAGGGTAGTAA+TGG | + | chr3_2:61140801-61140820 | Msa0415100:intron | 30.0% | |
| ACAACAACATTTGATATGTC+CGG | + | chr3_2:61140888-61140907 | Msa0415100:intron | 30.0% | |
| ACAAAACAAGTGCTTAAAAG+TGG | - | chr3_2:61141035-61141054 | None:intergenic | 30.0% | |
| !!! | TTTTAAGCACTTGTTTTGTG+AGG | + | chr3_2:61141036-61141055 | Msa0415100:intron | 30.0% |
| ! | AATTGACACACTCTTTTGTT+AGG | + | chr3_2:61141105-61141124 | Msa0415100:intron | 30.0% |
| !!! | AGATGCTATCTTTTGAGTTT+GGG | - | chr3_2:61141145-61141164 | None:intergenic | 30.0% |
| GCTGTATTTGTAATCACATA+AGG | + | chr3_2:61141307-61141326 | Msa0415100:intron | 30.0% | |
| TTTGTAATCACATAAGGCTA+TGG | + | chr3_2:61141313-61141332 | Msa0415100:intron | 30.0% | |
| ! | ATGTAAGTGATGATGCATTA+TGG | - | chr3_2:61141577-61141596 | None:intergenic | 30.0% |
| ATTGTATAGCCATATAGCAT+TGG | - | chr3_2:61141708-61141727 | None:intergenic | 30.0% | |
| AGTATATGGATATGAACATG+AGG | - | chr3_2:61141793-61141812 | None:intergenic | 30.0% | |
| TTCATATCCATATACTTCCT+CGG | + | chr3_2:61141797-61141816 | Msa0415100:CDS | 30.0% | |
| !! | GATGACATTTATGATTTGGT+AGG | + | chr3_2:61141844-61141863 | Msa0415100:intron | 30.0% |
| !! | ACATTTATGATTTGGTAGGA+TGG | + | chr3_2:61141848-61141867 | Msa0415100:intron | 30.0% |
| GCAGATAAATGAAAAAGAGA+AGG | + | chr3_2:61141961-61141980 | Msa0415100:intron | 30.0% | |
| TGAAAACTTGTATAGTTACG+AGG | + | chr3_2:61142137-61142156 | Msa0415100:three_prime_UTR | 30.0% | |
| GGTTCCTATTATATGGAAAT+TGG | + | chr3_2:61142158-61142177 | Msa0415100:three_prime_UTR | 30.0% | |
| ! | ATTGGGGGTGTAAATAAAGA+TGG | + | chr3_2:61140325-61140344 | Msa0415100:intron | 35.0% |
| TATGAAACACTGAACTATGG+TGG | - | chr3_2:61140385-61140404 | None:intergenic | 35.0% | |
| GACAAAGGCAAAAGAAAGAT+CGG | - | chr3_2:61140411-61140430 | None:intergenic | 35.0% | |
| ATGGTAAATGTATGTCTCGT+AGG | + | chr3_2:61140842-61140861 | Msa0415100:intron | 35.0% | |
| AGCATGTTCAAATCAACAAC+CGG | - | chr3_2:61140910-61140929 | None:intergenic | 35.0% | |
| ACACAACAAGTGCTTAAAAG+AGG | - | chr3_2:61140938-61140957 | None:intergenic | 35.0% | |
| !!! | TTTTAAGCACTTGTTGTGTG+AGG | + | chr3_2:61140939-61140958 | Msa0415100:intron | 35.0% |
| !!! | GAGATGCTATCTTTTGAGTT+TGG | - | chr3_2:61141146-61141165 | None:intergenic | 35.0% |
| GCTTCATCATATAACCACAT+TGG | + | chr3_2:61141204-61141223 | Msa0415100:intron | 35.0% | |
| ACAGTAATCACTAACCAATG+TGG | - | chr3_2:61141221-61141240 | None:intergenic | 35.0% | |
| TTGTAGCCGTGATGATATTA+AGG | - | chr3_2:61141351-61141370 | None:intergenic | 35.0% | |
| CTGGTTCAGAAAGATTGATT+TGG | - | chr3_2:61141743-61141762 | None:intergenic | 35.0% | |
| CAAATCAATCTTTCTGAACC+AGG | + | chr3_2:61141741-61141760 | Msa0415100:intron | 35.0% | |
| CATATACTTCCTCGGAAAAA+CGG | + | chr3_2:61141805-61141824 | Msa0415100:CDS | 35.0% | |
| TGGATTTAGAGAGGAAAGAT+AGG | + | chr3_2:61142005-61142024 | Msa0415100:CDS | 35.0% | |
| GTTACGAGGTTCCTATTATA+TGG | + | chr3_2:61142151-61142170 | Msa0415100:three_prime_UTR | 35.0% | |
| TATGTTTCTTACGGTAGCTT+TGG | + | chr3_2:61142185-61142204 | Msa0415100:three_prime_UTR | 35.0% | |
| ! | ATTGGGGGTGTAAATAAAGA+TGG | + | chr3_2:61140325-61140344 | Msa0415100:intron | 35.0% |
| TATGAAACACTGAACTATGG+TGG | - | chr3_2:61140385-61140404 | None:intergenic | 35.0% | |
| GACAAAGGCAAAAGAAAGAT+CGG | - | chr3_2:61140411-61140430 | None:intergenic | 35.0% | |
| ATGGTAAATGTATGTCTCGT+AGG | + | chr3_2:61140842-61140861 | Msa0415100:intron | 35.0% | |
| AGCATGTTCAAATCAACAAC+CGG | - | chr3_2:61140910-61140929 | None:intergenic | 35.0% | |
| ACACAACAAGTGCTTAAAAG+AGG | - | chr3_2:61140938-61140957 | None:intergenic | 35.0% | |
| !!! | TTTTAAGCACTTGTTGTGTG+AGG | + | chr3_2:61140939-61140958 | Msa0415100:intron | 35.0% |
| !!! | GAGATGCTATCTTTTGAGTT+TGG | - | chr3_2:61141146-61141165 | None:intergenic | 35.0% |
| GCTTCATCATATAACCACAT+TGG | + | chr3_2:61141204-61141223 | Msa0415100:intron | 35.0% | |
| ACAGTAATCACTAACCAATG+TGG | - | chr3_2:61141221-61141240 | None:intergenic | 35.0% | |
| TTGTAGCCGTGATGATATTA+AGG | - | chr3_2:61141351-61141370 | None:intergenic | 35.0% | |
| CTGGTTCAGAAAGATTGATT+TGG | - | chr3_2:61141743-61141762 | None:intergenic | 35.0% | |
| CAAATCAATCTTTCTGAACC+AGG | + | chr3_2:61141741-61141760 | Msa0415100:intron | 35.0% | |
| CATATACTTCCTCGGAAAAA+CGG | + | chr3_2:61141805-61141824 | Msa0415100:CDS | 35.0% | |
| TGGATTTAGAGAGGAAAGAT+AGG | + | chr3_2:61142005-61142024 | Msa0415100:CDS | 35.0% | |
| GTTACGAGGTTCCTATTATA+TGG | + | chr3_2:61142151-61142170 | Msa0415100:three_prime_UTR | 35.0% | |
| TATGTTTCTTACGGTAGCTT+TGG | + | chr3_2:61142185-61142204 | Msa0415100:three_prime_UTR | 35.0% | |
| TACCTTAATGGAGTGAGTAG+AGG | - | chr3_2:61140229-61140248 | None:intergenic | 40.0% | |
| GCAATAGATCAAAGAGGTGA+GGG | - | chr3_2:61140466-61140485 | None:intergenic | 40.0% | |
| AGCAATAGATCAAAGAGGTG+AGG | - | chr3_2:61140467-61140486 | None:intergenic | 40.0% | |
| GCTTAAAAGTGGAGAATAGC+AGG | - | chr3_2:61141024-61141043 | None:intergenic | 40.0% | |
| TGCCTAAGACCAATGCTATA+TGG | + | chr3_2:61141696-61141715 | Msa0415100:intron | 40.0% | |
| !! | AGCCATATAGCATTGGTCTT+AGG | - | chr3_2:61141701-61141720 | None:intergenic | 40.0% |
| TCAATCTTTCTGAACCAGGA+TGG | + | chr3_2:61141745-61141764 | Msa0415100:intron | 40.0% | |
| !! | CGTTTTTCCGAGGAAGTATA+TGG | - | chr3_2:61141807-61141826 | None:intergenic | 40.0% |
| GTTGAAAAGTAAGCTAGCTG+TGG | + | chr3_2:61141985-61142004 | Msa0415100:CDS | 40.0% | |
| AGATAGGAGCCTTGAAGAAA+TGG | + | chr3_2:61142021-61142040 | Msa0415100:CDS | 40.0% | |
| TACCTTAATGGAGTGAGTAG+AGG | - | chr3_2:61140229-61140248 | None:intergenic | 40.0% | |
| GCAATAGATCAAAGAGGTGA+GGG | - | chr3_2:61140466-61140485 | None:intergenic | 40.0% | |
| AGCAATAGATCAAAGAGGTG+AGG | - | chr3_2:61140467-61140486 | None:intergenic | 40.0% | |
| GCTTAAAAGTGGAGAATAGC+AGG | - | chr3_2:61141024-61141043 | None:intergenic | 40.0% | |
| TGCCTAAGACCAATGCTATA+TGG | + | chr3_2:61141696-61141715 | Msa0415100:intron | 40.0% | |
| !! | AGCCATATAGCATTGGTCTT+AGG | - | chr3_2:61141701-61141720 | None:intergenic | 40.0% |
| TCAATCTTTCTGAACCAGGA+TGG | + | chr3_2:61141745-61141764 | Msa0415100:intron | 40.0% | |
| !! | CGTTTTTCCGAGGAAGTATA+TGG | - | chr3_2:61141807-61141826 | None:intergenic | 40.0% |
| GTTGAAAAGTAAGCTAGCTG+TGG | + | chr3_2:61141985-61142004 | Msa0415100:CDS | 40.0% | |
| AGATAGGAGCCTTGAAGAAA+TGG | + | chr3_2:61142021-61142040 | Msa0415100:CDS | 40.0% | |
| CTCCTCTACTCACTCCATTA+AGG | + | chr3_2:61140224-61140243 | Msa0415100:five_prime_UTR | 45.0% | |
| TGGCGCATAGCACATAAACT+TGG | + | chr3_2:61141533-61141552 | Msa0415100:CDS | 45.0% | |
| !! | TCGAAATCACCGTTTTTCCG+AGG | - | chr3_2:61141817-61141836 | None:intergenic | 45.0% |
| AGCTAGCTGTGGATTTAGAG+AGG | + | chr3_2:61141996-61142015 | Msa0415100:CDS | 45.0% | |
| !! | CCTCTTGTGCCATTTCTTCA+AGG | - | chr3_2:61142033-61142052 | None:intergenic | 45.0% |
| CCTTGAAGAAATGGCACAAG+AGG | + | chr3_2:61142030-61142049 | Msa0415100:CDS | 45.0% | |
| CTCCTCTACTCACTCCATTA+AGG | + | chr3_2:61140224-61140243 | Msa0415100:five_prime_UTR | 45.0% | |
| TGGCGCATAGCACATAAACT+TGG | + | chr3_2:61141533-61141552 | Msa0415100:CDS | 45.0% | |
| !! | TCGAAATCACCGTTTTTCCG+AGG | - | chr3_2:61141817-61141836 | None:intergenic | 45.0% |
| AGCTAGCTGTGGATTTAGAG+AGG | + | chr3_2:61141996-61142015 | Msa0415100:CDS | 45.0% | |
| !! | CCTCTTGTGCCATTTCTTCA+AGG | - | chr3_2:61142033-61142052 | None:intergenic | 45.0% |
| CCTTGAAGAAATGGCACAAG+AGG | + | chr3_2:61142030-61142049 | Msa0415100:CDS | 45.0% | |
| AGCAAGATACCAGTGACAGC+AGG | - | chr3_2:61140443-61140462 | None:intergenic | 50.0% | |
| GGAACTGATTGTCCAGCTTG+AGG | - | chr3_2:61141772-61141791 | None:intergenic | 50.0% | |
| AGCAAGATACCAGTGACAGC+AGG | - | chr3_2:61140443-61140462 | None:intergenic | 50.0% | |
| GGAACTGATTGTCCAGCTTG+AGG | - | chr3_2:61141772-61141791 | None:intergenic | 50.0% | |
| ! | AGCAGGACGCAGGTTGACAA+AGG | - | chr3_2:61140426-61140445 | None:intergenic | 55.0% |
| ACACGCTTCACTTCGCGCTT+CGG | - | chr3_2:61141479-61141498 | None:intergenic | 55.0% | |
| AACCAGGATGGACCTCAAGC+TGG | + | chr3_2:61141757-61141776 | Msa0415100:intron | 55.0% | |
| ! | AGCAGGACGCAGGTTGACAA+AGG | - | chr3_2:61140426-61140445 | None:intergenic | 55.0% |
| ACACGCTTCACTTCGCGCTT+CGG | - | chr3_2:61141479-61141498 | None:intergenic | 55.0% | |
| AACCAGGATGGACCTCAAGC+TGG | + | chr3_2:61141757-61141776 | Msa0415100:intron | 55.0% | |
| AACCTGCGTCCTGCTGTCAC+TGG | + | chr3_2:61140431-61140450 | Msa0415100:CDS | 60.0% | |
| TACCAGTGACAGCAGGACGC+AGG | - | chr3_2:61140436-61140455 | None:intergenic | 60.0% | |
| GTCCAGCTTGAGGTCCATCC+TGG | - | chr3_2:61141762-61141781 | None:intergenic | 60.0% | |
| AACCTGCGTCCTGCTGTCAC+TGG | + | chr3_2:61140431-61140450 | Msa0415100:CDS | 60.0% | |
| TACCAGTGACAGCAGGACGC+AGG | - | chr3_2:61140436-61140455 | None:intergenic | 60.0% | |
| GTCCAGCTTGAGGTCCATCC+TGG | - | chr3_2:61141762-61141781 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 61140083 | 61142232 | 61140083 | ID=Msa0415100;Name=Msa0415100 |
| chr3_2 | mRNA | 61140083 | 61142232 | 61140083 | ID=Msa0415100-mRNA-1;Parent=Msa0415100;Name=Msa0415100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=163|0.6|0.66|0.83|0.8|0.83|6|151|152 |
| chr3_2 | exon | 61140083 | 61140245 | 61140083 | ID=Msa0415100-mRNA-1:exon:12830;Parent=Msa0415100-mRNA-1 |
| chr3_2 | exon | 61140344 | 61140452 | 61140344 | ID=Msa0415100-mRNA-1:exon:12831;Parent=Msa0415100-mRNA-1 |
| chr3_2 | exon | 61141308 | 61141315 | 61141308 | ID=Msa0415100-mRNA-1:exon:12832;Parent=Msa0415100-mRNA-1 |
| chr3_2 | exon | 61141482 | 61141607 | 61141482 | ID=Msa0415100-mRNA-1:exon:12833;Parent=Msa0415100-mRNA-1 |
| chr3_2 | exon | 61141763 | 61141861 | 61141763 | ID=Msa0415100-mRNA-1:exon:12834;Parent=Msa0415100-mRNA-1 |
| chr3_2 | exon | 61141965 | 61142232 | 61141965 | ID=Msa0415100-mRNA-1:exon:12835;Parent=Msa0415100-mRNA-1 |
| chr3_2 | five_prime_UTR | 61140083 | 61140245 | 61140083 | ID=Msa0415100-mRNA-1:five_prime_utr;Parent=Msa0415100-mRNA-1 |
| chr3_2 | CDS | 61140344 | 61140452 | 61140344 | ID=Msa0415100-mRNA-1:cds;Parent=Msa0415100-mRNA-1 |
| chr3_2 | CDS | 61141308 | 61141315 | 61141308 | ID=Msa0415100-mRNA-1:cds;Parent=Msa0415100-mRNA-1 |
| chr3_2 | CDS | 61141482 | 61141607 | 61141482 | ID=Msa0415100-mRNA-1:cds;Parent=Msa0415100-mRNA-1 |
| chr3_2 | CDS | 61141763 | 61141861 | 61141763 | ID=Msa0415100-mRNA-1:cds;Parent=Msa0415100-mRNA-1 |
| chr3_2 | CDS | 61141965 | 61142081 | 61141965 | ID=Msa0415100-mRNA-1:cds;Parent=Msa0415100-mRNA-1 |
| chr3_2 | three_prime_UTR | 61142082 | 61142232 | 61142082 | ID=Msa0415100-mRNA-1:three_prime_utr;Parent=Msa0415100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
