Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023785.t1 | ABN08821.1 | 92.4 | 315 | 24 | 0 | 56 | 370 | 6 | 320 | 1.20E-164 | 589.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023785.t1 | A2Q5C1 | 92.4 | 315 | 24 | 0 | 56 | 370 | 6 | 320 | 8.7e-165 | 589.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023785.t1 | MTR_7g076110 | 94.569 | 313 | 17 | 0 | 58 | 370 | 1 | 313 | 0.0 | 584 |
MS.gene023785.t1 | MTR_7g077620 | 56.201 | 379 | 146 | 8 | 1 | 368 | 1 | 370 | 3.88e-133 | 386 |
MS.gene023785.t1 | MTR_7g077650 | 53.627 | 386 | 149 | 12 | 1 | 370 | 1 | 372 | 1.17e-121 | 356 |
MS.gene023785.t1 | MTR_7g077660 | 53.191 | 376 | 155 | 9 | 5 | 370 | 4 | 368 | 2.85e-118 | 347 |
MS.gene023785.t1 | MTR_7g076100 | 60.504 | 238 | 90 | 4 | 134 | 370 | 66 | 300 | 3.57e-91 | 276 |
MS.gene023785.t1 | MTR_7g076100 | 83.333 | 54 | 9 | 0 | 1 | 54 | 1 | 54 | 1.97e-24 | 102 |
MS.gene023785.t1 | MTR_5g038260 | 39.433 | 388 | 202 | 14 | 6 | 370 | 6 | 383 | 1.51e-74 | 236 |
MS.gene023785.t1 | MTR_1g108740 | 42.627 | 373 | 177 | 14 | 3 | 368 | 2 | 344 | 2.63e-73 | 231 |
MS.gene023785.t1 | MTR_5g082770 | 44.408 | 304 | 143 | 9 | 6 | 302 | 4 | 288 | 2.83e-72 | 227 |
MS.gene023785.t1 | MTR_5g038230 | 36.951 | 387 | 183 | 13 | 6 | 368 | 4 | 353 | 2.58e-67 | 216 |
MS.gene023785.t1 | MTR_1g064570 | 38.592 | 412 | 193 | 16 | 5 | 370 | 3 | 400 | 1.82e-65 | 213 |
MS.gene023785.t1 | MTR_1g016150 | 44.898 | 196 | 78 | 7 | 3 | 180 | 2 | 185 | 5.76e-42 | 147 |
MS.gene023785.t1 | MTR_7g076130 | 56.349 | 126 | 53 | 2 | 163 | 287 | 24 | 148 | 1.32e-38 | 135 |
MS.gene023785.t1 | MTR_5g082780 | 38.667 | 225 | 108 | 8 | 109 | 325 | 6 | 208 | 9.16e-33 | 122 |
MS.gene023785.t1 | MTR_1g108750 | 44.000 | 150 | 53 | 4 | 6 | 154 | 4 | 123 | 1.93e-25 | 99.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 83 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGAGCAAACCAACCATTT+TGG | 0.209572 | 7.1:-27125816 | MS.gene023785:CDS |
GACAGTGTTCCAGAAGATTT+AGG | 0.219883 | 7.1:-27125334 | MS.gene023785:CDS |
TTCTCATAGTAGGTAAAATT+AGG | 0.225887 | 7.1:+27125658 | None:intergenic |
ACCATCAAAACCATCAATTT+AGG | 0.249142 | 7.1:-27126182 | MS.gene023785:CDS |
ACCTGTCATGGCTCTTCATT+TGG | 0.288626 | 7.1:-27126042 | MS.gene023785:CDS |
ATCCCAAACCCTAAATCTTC+TGG | 0.300792 | 7.1:+27125325 | None:intergenic |
GGAATAATACCATACTTAAA+AGG | 0.315387 | 7.1:+27125973 | None:intergenic |
CGACGTTTACAAATTGAAAC+TGG | 0.332871 | 7.1:-27125503 | MS.gene023785:CDS |
GTTCCAGAAGATTTAGGGTT+TGG | 0.341176 | 7.1:-27125328 | MS.gene023785:CDS |
AATGAACAGACTTAAGAGTT+TGG | 0.348149 | 7.1:-27125455 | MS.gene023785:CDS |
AGAAGAACTTCCTCTTAGTT+TGG | 0.350191 | 7.1:-27126286 | MS.gene023785:CDS |
TGTAATAAATCTGTAACTAT+AGG | 0.354481 | 7.1:+27125790 | None:intergenic |
TTCCAGAAGATTTAGGGTTT+GGG | 0.356926 | 7.1:-27125327 | MS.gene023785:CDS |
AGTACTCTTTGTGGCTTAGA+AGG | 0.357548 | 7.1:+27126094 | None:intergenic |
GTCATGGCTCTTCATTTGGT+TGG | 0.362670 | 7.1:-27126038 | MS.gene023785:CDS |
ACAGTGTTCCAGAAGATTTA+GGG | 0.377757 | 7.1:-27125333 | MS.gene023785:CDS |
ACACTCCGGAGATATCTTAA+AGG | 0.378694 | 7.1:+27125919 | None:intergenic |
AAGTTTGTCCAGCATAATCT+TGG | 0.388756 | 7.1:+27125605 | None:intergenic |
AAAAGGATTGAGTAGAGTTA+TGG | 0.390478 | 7.1:+27125990 | None:intergenic |
GGGCTCTACCTCAATTTCAA+TGG | 0.397463 | 7.1:-27125231 | MS.gene023785:CDS |
GTAACTATAGGAATCCAAAA+TGG | 0.407448 | 7.1:+27125802 | None:intergenic |
CACATAGATCATCTTAGATT+CGG | 0.408172 | 7.1:-27126243 | MS.gene023785:CDS |
ATGAACAGACTTAAGAGTTT+GGG | 0.410853 | 7.1:-27125454 | MS.gene023785:CDS |
GGCTCTACCTCAATTTCAAT+GGG | 0.416041 | 7.1:-27125230 | MS.gene023785:CDS |
TCTCATAGTAGGTAAAATTA+GGG | 0.423599 | 7.1:+27125659 | None:intergenic |
GCTAGTTATCTTCTCATAGT+AGG | 0.423741 | 7.1:+27125648 | None:intergenic |
TACTGCTCTTGGATTCGATT+GGG | 0.430675 | 7.1:+27126130 | None:intergenic |
ATTGAATGGAGTACTCTTTG+TGG | 0.430687 | 7.1:+27126085 | None:intergenic |
ACGACAGCAACATAATCATC+TGG | 0.430984 | 7.1:+27125868 | None:intergenic |
TTCGAGAGGTGGCAGACTAA+TGG | 0.431252 | 7.1:+27125948 | None:intergenic |
TTAGGGTCATTTGAGCGATC+AGG | 0.435005 | 7.1:+27125676 | None:intergenic |
TCGAGAGGTGGCAGACTAAT+GGG | 0.436341 | 7.1:+27125949 | None:intergenic |
GACATCGAAAAGCTTTCATA+TGG | 0.441021 | 7.1:-27125529 | MS.gene023785:CDS |
GTATAGTATTCCTAAATTGA+TGG | 0.447518 | 7.1:+27126172 | None:intergenic |
CGATGAGGAAGGTGGTAGAC+TGG | 0.455468 | 7.1:-27126317 | MS.gene023785:CDS |
TATCTTGTGAAATCATTGAA+TGG | 0.459383 | 7.1:-27125583 | MS.gene023785:CDS |
GATTGGGACGCTCATGATCA+TGG | 0.463327 | 7.1:+27126146 | None:intergenic |
AATCAATCCCATTGAAATTG+AGG | 0.474667 | 7.1:+27125223 | None:intergenic |
GCTGTCGTCATTTACAACTT+TGG | 0.475418 | 7.1:-27125853 | MS.gene023785:CDS |
TAATCATCTGGGCTTATGAT+GGG | 0.479866 | 7.1:+27125880 | None:intergenic |
ATACAAGGATCTACTGCTCT+TGG | 0.483271 | 7.1:+27126119 | None:intergenic |
ATAATCATCTGGGCTTATGA+TGG | 0.483695 | 7.1:+27125879 | None:intergenic |
CTACTGCTCTTGGATTCGAT+TGG | 0.489995 | 7.1:+27126129 | None:intergenic |
TAGGGTCATTTGAGCGATCA+GGG | 0.500420 | 7.1:+27125677 | None:intergenic |
AATCATTGAATGGAGACATA+TGG | 0.507395 | 7.1:-27125573 | MS.gene023785:CDS |
AGTTTGTCCAGCATAATCTT+GGG | 0.508944 | 7.1:+27125606 | None:intergenic |
TTGTCAAGAACCAAACTAAG+AGG | 0.509205 | 7.1:+27126276 | None:intergenic |
TCGGTTTCGTGTGCAAGACT+TGG | 0.511651 | 7.1:-27126224 | MS.gene023785:CDS |
AGGAGGAGTGTTGAACTTGA+AGG | 0.513586 | 7.1:+27125702 | None:intergenic |
ACAAGAGGCAGACACAGAAA+AGG | 0.516829 | 7.1:+27125396 | None:intergenic |
TGTGATGGATGAAAATTGAA+TGG | 0.520449 | 7.1:+27126071 | None:intergenic |
CTATAGGAATCCAAAATGGT+TGG | 0.542954 | 7.1:+27125806 | None:intergenic |
CACCACCTTTAAGATATCTC+CGG | 0.544228 | 7.1:-27125924 | MS.gene023785:CDS |
GGGATCTATAATGTGAAGGA+TGG | 0.545871 | 7.1:-27125307 | MS.gene023785:CDS |
ATTGGGACGCTCATGATCAT+GGG | 0.549814 | 7.1:+27126147 | None:intergenic |
ACCAAATGAAGAGCCATGAC+AGG | 0.552193 | 7.1:+27126041 | None:intergenic |
GCTAGAGCCCAAGATTATGC+TGG | 0.553236 | 7.1:-27125613 | MS.gene023785:CDS |
TGCGTCTGCTCGAAGGAAAG+TGG | 0.572553 | 7.1:+27125262 | None:intergenic |
GTGGCTTAGAAGGCTATACA+AGG | 0.574812 | 7.1:+27126104 | None:intergenic |
ATCACATTTATAACCTGTCA+TGG | 0.576549 | 7.1:-27126054 | MS.gene023785:CDS |
ATCTGGGCTTATGATGGGGT+CGG | 0.585200 | 7.1:+27125885 | None:intergenic |
GATGAGGAAGGTGGTAGACT+GGG | 0.589322 | 7.1:-27126316 | MS.gene023785:CDS |
CTTTCATTAGTCCACAGTAA+CGG | 0.591490 | 7.1:-27126015 | MS.gene023785:CDS |
CGACAGCAACATAATCATCT+GGG | 0.592571 | 7.1:+27125869 | None:intergenic |
TTTGAACTTGGAGAAACAAG+AGG | 0.593858 | 7.1:+27125381 | None:intergenic |
ATGACAGGTTATAAATGTGA+TGG | 0.594341 | 7.1:+27126056 | None:intergenic |
GGGTCATTTGAGCGATCAGG+GGG | 0.608939 | 7.1:+27125679 | None:intergenic |
AAAGGTGGTGATTCGAGAGG+TGG | 0.610801 | 7.1:+27125937 | None:intergenic |
GTTTGGGATCTATAATGTGA+AGG | 0.626362 | 7.1:-27125311 | MS.gene023785:CDS |
AATCATCTGGGCTTATGATG+GGG | 0.632274 | 7.1:+27125881 | None:intergenic |
AAGTCTCTTAACGATGAGGA+AGG | 0.637834 | 7.1:-27126328 | None:intergenic |
AGGGTCATTTGAGCGATCAG+GGG | 0.648257 | 7.1:+27125678 | None:intergenic |
CTCCGGAGATATCTTAAAGG+TGG | 0.652726 | 7.1:+27125922 | None:intergenic |
TCTCTTAACGATGAGGAAGG+TGG | 0.661904 | 7.1:-27126325 | None:intergenic |
CGGCAGACAATGTAACACTC+CGG | 0.665324 | 7.1:+27125905 | None:intergenic |
GAGTTATGGAACCGTTACTG+TGG | 0.666466 | 7.1:+27126004 | None:intergenic |
GGGACGCTCATGATCATGGG+TGG | 0.671811 | 7.1:+27126150 | None:intergenic |
CTTAAAGGTGGTGATTCGAG+AGG | 0.674686 | 7.1:+27125934 | None:intergenic |
ATTGAATGGAGACATATGGA+TGG | 0.693585 | 7.1:-27125569 | MS.gene023785:CDS |
TTGAAACTGGACACCCAGAG+TGG | 0.696035 | 7.1:-27125490 | MS.gene023785:CDS |
GGATTGAATAGTGTCTGAGT+GGG | 0.704793 | 7.1:+27125723 | None:intergenic |
AGGATTGAATAGTGTCTGAG+TGG | 0.717909 | 7.1:+27125722 | None:intergenic |
AGAGGTGGCAGACTAATGGG+AGG | 0.718242 | 7.1:+27125952 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATGATGTTGTATTTTATAA+AGG | - | chr7.1:27125777-27125796 | MS.gene023785:CDS | 15.0% |
!! | TGTAATAAATCTGTAACTAT+AGG | + | chr7.1:27125753-27125772 | None:intergenic | 20.0% |
!!! | ATTTTATTTATCGGATATTG+TGG | - | chr7.1:27126116-27126135 | MS.gene023785:CDS | 20.0% |
! | GGAATAATACCATACTTAAA+AGG | + | chr7.1:27125570-27125589 | None:intergenic | 25.0% |
! | GTATAGTATTCCTAAATTGA+TGG | + | chr7.1:27125371-27125390 | None:intergenic | 25.0% |
! | TATCTTGTGAAATCATTGAA+TGG | - | chr7.1:27125957-27125976 | MS.gene023785:CDS | 25.0% |
! | TCTCATAGTAGGTAAAATTA+GGG | + | chr7.1:27125884-27125903 | None:intergenic | 25.0% |
! | TTCTCATAGTAGGTAAAATT+AGG | + | chr7.1:27125885-27125904 | None:intergenic | 25.0% |
!!! | AACTGAATCTTTTTTGAACT+TGG | + | chr7.1:27126174-27126193 | None:intergenic | 25.0% |
!!! | GGAGACAACATTTTATTTAT+CGG | - | chr7.1:27126107-27126126 | MS.gene023785:CDS | 25.0% |
AAAAGGATTGAGTAGAGTTA+TGG | + | chr7.1:27125553-27125572 | None:intergenic | 30.0% | |
AATCATTGAATGGAGACATA+TGG | - | chr7.1:27125967-27125986 | MS.gene023785:CDS | 30.0% | |
AATGAACAGACTTAAGAGTT+TGG | - | chr7.1:27126085-27126104 | MS.gene023785:CDS | 30.0% | |
ACCATCAAAACCATCAATTT+AGG | - | chr7.1:27125358-27125377 | MS.gene023785:CDS | 30.0% | |
ATCACATTTATAACCTGTCA+TGG | - | chr7.1:27125486-27125505 | MS.gene023785:CDS | 30.0% | |
ATGAACAGACTTAAGAGTTT+GGG | - | chr7.1:27126086-27126105 | MS.gene023785:CDS | 30.0% | |
ATGACAGGTTATAAATGTGA+TGG | + | chr7.1:27125487-27125506 | None:intergenic | 30.0% | |
CACATAGATCATCTTAGATT+CGG | - | chr7.1:27125297-27125316 | MS.gene023785:CDS | 30.0% | |
GTAACTATAGGAATCCAAAA+TGG | + | chr7.1:27125741-27125760 | None:intergenic | 30.0% | |
! | TTGCTCTTTTGAATGCAATA+CGG | + | chr7.1:27125713-27125732 | None:intergenic | 30.0% |
!! | CTACTCAATCCTTTTAAGTA+TGG | - | chr7.1:27125558-27125577 | MS.gene023785:CDS | 30.0% |
!! | TGTGATGGATGAAAATTGAA+TGG | + | chr7.1:27125472-27125491 | None:intergenic | 30.0% |
!!! | TCCTAAATTGATGGTTTTGA+TGG | + | chr7.1:27125362-27125381 | None:intergenic | 30.0% |
AAGTTTGTCCAGCATAATCT+TGG | + | chr7.1:27125938-27125957 | None:intergenic | 35.0% | |
ACAGTGTTCCAGAAGATTTA+GGG | - | chr7.1:27126207-27126226 | MS.gene023785:CDS | 35.0% | |
AGAAGAACTTCCTCTTAGTT+TGG | - | chr7.1:27125254-27125273 | MS.gene023785:CDS | 35.0% | |
AGTTTGTCCAGCATAATCTT+GGG | + | chr7.1:27125937-27125956 | None:intergenic | 35.0% | |
ATAATCATCTGGGCTTATGA+TGG | + | chr7.1:27125664-27125683 | None:intergenic | 35.0% | |
ATTGAATGGAGACATATGGA+TGG | - | chr7.1:27125971-27125990 | MS.gene023785:CDS | 35.0% | |
CGACGTTTACAAATTGAAAC+TGG | - | chr7.1:27126037-27126056 | MS.gene023785:CDS | 35.0% | |
CTATAGGAATCCAAAATGGT+TGG | + | chr7.1:27125737-27125756 | None:intergenic | 35.0% | |
CTTTCATTAGTCCACAGTAA+CGG | - | chr7.1:27125525-27125544 | MS.gene023785:CDS | 35.0% | |
GACATCGAAAAGCTTTCATA+TGG | - | chr7.1:27126011-27126030 | MS.gene023785:CDS | 35.0% | |
GCTAGTTATCTTCTCATAGT+AGG | + | chr7.1:27125895-27125914 | None:intergenic | 35.0% | |
TAATCATCTGGGCTTATGAT+GGG | + | chr7.1:27125663-27125682 | None:intergenic | 35.0% | |
TTGTCAAGAACCAAACTAAG+AGG | + | chr7.1:27125267-27125286 | None:intergenic | 35.0% | |
TTTGAACTTGGAGAAACAAG+AGG | + | chr7.1:27126162-27126181 | None:intergenic | 35.0% | |
! | AAAGAGCAAACCAACCATTT+TGG | - | chr7.1:27125724-27125743 | MS.gene023785:CDS | 35.0% |
! | ATTGAATGGAGTACTCTTTG+TGG | + | chr7.1:27125458-27125477 | None:intergenic | 35.0% |
! | GTTTGGGATCTATAATGTGA+AGG | - | chr7.1:27126229-27126248 | MS.gene023785:CDS | 35.0% |
! | TTCCAGAAGATTTAGGGTTT+GGG | - | chr7.1:27126213-27126232 | MS.gene023785:CDS | 35.0% |
! | TTGTACAAGTTTTCCACTCT+GGG | + | chr7.1:27126066-27126085 | None:intergenic | 35.0% |
! | TTTGTACAAGTTTTCCACTC+TGG | + | chr7.1:27126067-27126086 | None:intergenic | 35.0% |
AAAAAATTGCGTCTGCTCGA+AGG | + | chr7.1:27126288-27126307 | None:intergenic | 40.0% | |
AATCATCTGGGCTTATGATG+GGG | + | chr7.1:27125662-27125681 | None:intergenic | 40.0% | |
ACACTCCGGAGATATCTTAA+AGG | + | chr7.1:27125624-27125643 | None:intergenic | 40.0% | |
ACGACAGCAACATAATCATC+TGG | + | chr7.1:27125675-27125694 | None:intergenic | 40.0% | |
AGGATTGAATAGTGTCTGAG+TGG | + | chr7.1:27125821-27125840 | None:intergenic | 40.0% | |
AGTACTCTTTGTGGCTTAGA+AGG | + | chr7.1:27125449-27125468 | None:intergenic | 40.0% | |
ATACAAGGATCTACTGCTCT+TGG | + | chr7.1:27125424-27125443 | None:intergenic | 40.0% | |
ATCCCAAACCCTAAATCTTC+TGG | + | chr7.1:27126218-27126237 | None:intergenic | 40.0% | |
CGACAGCAACATAATCATCT+GGG | + | chr7.1:27125674-27125693 | None:intergenic | 40.0% | |
GACAGTGTTCCAGAAGATTT+AGG | - | chr7.1:27126206-27126225 | MS.gene023785:CDS | 40.0% | |
GCTGTCGTCATTTACAACTT+TGG | - | chr7.1:27125687-27125706 | MS.gene023785:CDS | 40.0% | |
GGATTGAATAGTGTCTGAGT+GGG | + | chr7.1:27125820-27125839 | None:intergenic | 40.0% | |
GGCTCTACCTCAATTTCAAT+GGG | - | chr7.1:27126310-27126329 | MS.gene023785:CDS | 40.0% | |
GGGATCTATAATGTGAAGGA+TGG | - | chr7.1:27126233-27126252 | MS.gene023785:CDS | 40.0% | |
TACTGCTCTTGGATTCGATT+GGG | + | chr7.1:27125413-27125432 | None:intergenic | 40.0% | |
! | GTTCCAGAAGATTTAGGGTT+TGG | - | chr7.1:27126212-27126231 | MS.gene023785:CDS | 40.0% |
!! | CACCACCTTTAAGATATCTC+CGG | - | chr7.1:27125616-27125635 | MS.gene023785:CDS | 40.0% |
!!! | CGAGCAGACGCAATTTTTTT+GGG | - | chr7.1:27126289-27126308 | MS.gene023785:CDS | 40.0% |
!!! | TCGAGCAGACGCAATTTTTT+TGG | - | chr7.1:27126288-27126307 | MS.gene023785:CDS | 40.0% |
ACAAGAGGCAGACACAGAAA+AGG | + | chr7.1:27126147-27126166 | None:intergenic | 45.0% | |
ACCAAATGAAGAGCCATGAC+AGG | + | chr7.1:27125502-27125521 | None:intergenic | 45.0% | |
ACCTGTCATGGCTCTTCATT+TGG | - | chr7.1:27125498-27125517 | MS.gene023785:CDS | 45.0% | |
ATTGGGACGCTCATGATCAT+GGG | + | chr7.1:27125396-27125415 | None:intergenic | 45.0% | |
CTACTGCTCTTGGATTCGAT+TGG | + | chr7.1:27125414-27125433 | None:intergenic | 45.0% | |
CTCCGGAGATATCTTAAAGG+TGG | + | chr7.1:27125621-27125640 | None:intergenic | 45.0% | |
CTTAAAGGTGGTGATTCGAG+AGG | + | chr7.1:27125609-27125628 | None:intergenic | 45.0% | |
GAGTTATGGAACCGTTACTG+TGG | + | chr7.1:27125539-27125558 | None:intergenic | 45.0% | |
GGGCTCTACCTCAATTTCAA+TGG | - | chr7.1:27126309-27126328 | MS.gene023785:CDS | 45.0% | |
GTCATGGCTCTTCATTTGGT+TGG | - | chr7.1:27125502-27125521 | MS.gene023785:CDS | 45.0% | |
GTGGCTTAGAAGGCTATACA+AGG | + | chr7.1:27125439-27125458 | None:intergenic | 45.0% | |
TAGGGTCATTTGAGCGATCA+GGG | + | chr7.1:27125866-27125885 | None:intergenic | 45.0% | |
TTAGGGTCATTTGAGCGATC+AGG | + | chr7.1:27125867-27125886 | None:intergenic | 45.0% | |
!! | AGGAGGAGTGTTGAACTTGA+AGG | + | chr7.1:27125841-27125860 | None:intergenic | 45.0% |
AAAGGTGGTGATTCGAGAGG+TGG | + | chr7.1:27125606-27125625 | None:intergenic | 50.0% | |
AGGGTCATTTGAGCGATCAG+GGG | + | chr7.1:27125865-27125884 | None:intergenic | 50.0% | |
CGGCAGACAATGTAACACTC+CGG | + | chr7.1:27125638-27125657 | None:intergenic | 50.0% | |
GATTGGGACGCTCATGATCA+TGG | + | chr7.1:27125397-27125416 | None:intergenic | 50.0% | |
GCTAGAGCCCAAGATTATGC+TGG | - | chr7.1:27125927-27125946 | MS.gene023785:CDS | 50.0% | |
TCGAGAGGTGGCAGACTAAT+GGG | + | chr7.1:27125594-27125613 | None:intergenic | 50.0% | |
TCGGTTTCGTGTGCAAGACT+TGG | - | chr7.1:27125316-27125335 | MS.gene023785:CDS | 50.0% | |
TTCGAGAGGTGGCAGACTAA+TGG | + | chr7.1:27125595-27125614 | None:intergenic | 50.0% | |
TTGAAACTGGACACCCAGAG+TGG | - | chr7.1:27126050-27126069 | MS.gene023785:CDS | 50.0% | |
! | ATCTGGGCTTATGATGGGGT+CGG | + | chr7.1:27125658-27125677 | None:intergenic | 50.0% |
AGAGGTGGCAGACTAATGGG+AGG | + | chr7.1:27125591-27125610 | None:intergenic | 55.0% | |
GGGTCATTTGAGCGATCAGG+GGG | + | chr7.1:27125864-27125883 | None:intergenic | 55.0% | |
TCATTTGAGCGATCAGGGGG+AGG | + | chr7.1:27125861-27125880 | None:intergenic | 55.0% | |
TGCGTCTGCTCGAAGGAAAG+TGG | + | chr7.1:27126281-27126300 | None:intergenic | 55.0% | |
GGGACGCTCATGATCATGGG+TGG | + | chr7.1:27125393-27125412 | None:intergenic | 60.0% | |
TTTGAGCGATCAGGGGGAGG+AGG | + | chr7.1:27125858-27125877 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 27125225 | 27126337 | 27125225 | ID=MS.gene023785 |
chr7.1 | mRNA | 27125225 | 27126337 | 27125225 | ID=MS.gene023785.t1;Parent=MS.gene023785 |
chr7.1 | exon | 27125225 | 27126337 | 27125225 | ID=MS.gene023785.t1.exon1;Parent=MS.gene023785.t1 |
chr7.1 | CDS | 27125225 | 27126337 | 27125225 | ID=cds.MS.gene023785.t1;Parent=MS.gene023785.t1 |
Gene Sequence |
Protein sequence |