Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027042.t1 | XP_013468204.1 | 65.1 | 269 | 76 | 7 | 1 | 255 | 1 | 265 | 3.70E-88 | 334.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027042.t1 | A0A072VKT8 | 65.1 | 269 | 76 | 7 | 1 | 255 | 1 | 265 | 2.7e-88 | 334.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027042.t1 | MTR_1g064570 | 65.056 | 269 | 76 | 7 | 1 | 255 | 1 | 265 | 2.02e-113 | 332 |
| MS.gene027042.t1 | MTR_5g038260 | 50.379 | 264 | 112 | 9 | 1 | 255 | 3 | 256 | 1.01e-76 | 237 |
| MS.gene027042.t1 | MTR_5g038230 | 46.899 | 258 | 104 | 10 | 1 | 255 | 1 | 228 | 3.54e-64 | 204 |
| MS.gene027042.t1 | MTR_5g082770 | 47.308 | 260 | 112 | 9 | 1 | 255 | 1 | 240 | 1.13e-63 | 201 |
| MS.gene027042.t1 | MTR_1g108740 | 43.396 | 265 | 115 | 9 | 4 | 255 | 5 | 247 | 1.29e-55 | 182 |
| MS.gene027042.t1 | MTR_7g077650 | 39.929 | 283 | 119 | 12 | 2 | 255 | 3 | 263 | 1.26e-46 | 159 |
| MS.gene027042.t1 | MTR_7g077620 | 38.043 | 276 | 130 | 9 | 2 | 255 | 3 | 259 | 2.36e-46 | 159 |
| MS.gene027042.t1 | MTR_7g077660 | 39.416 | 274 | 124 | 12 | 4 | 255 | 5 | 258 | 1.66e-44 | 154 |
| MS.gene027042.t1 | MTR_1g016150 | 40.670 | 209 | 93 | 6 | 4 | 200 | 5 | 194 | 7.45e-38 | 133 |
| MS.gene027042.t1 | MTR_6g023955 | 70.652 | 92 | 25 | 1 | 134 | 225 | 63 | 152 | 3.31e-37 | 130 |
| MS.gene027042.t1 | MTR_1g108750 | 37.805 | 164 | 59 | 4 | 1 | 162 | 1 | 123 | 2.73e-24 | 94.4 |
| MS.gene027042.t1 | MTR_5g082780 | 40.411 | 146 | 75 | 5 | 113 | 255 | 7 | 143 | 7.01e-23 | 94.0 |
| MS.gene027042.t1 | MTR_7g076110 | 37.356 | 174 | 85 | 7 | 94 | 255 | 38 | 199 | 6.81e-20 | 87.4 |
| MS.gene027042.t1 | MTR_3g114970 | 26.636 | 214 | 133 | 8 | 1 | 208 | 1 | 196 | 1.59e-14 | 72.8 |
| MS.gene027042.t1 | MTR_7g076100 | 37.500 | 120 | 62 | 3 | 145 | 254 | 69 | 185 | 2.59e-12 | 65.9 |
| MS.gene027042.t1 | MTR_7g076100 | 55.102 | 49 | 22 | 0 | 4 | 52 | 6 | 54 | 5.41e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 54 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCACTTTACATTCATAAT+TGG | 0.230509 | 3.3:-43633062 | None:intergenic |
| TAAAATCTGGACAAAACTTT+TGG | 0.235612 | 3.3:+43633179 | MS.gene027042:CDS |
| TTGCAACTTATAAATTGTTT+TGG | 0.271302 | 3.3:-43632873 | None:intergenic |
| CTTTGTTCTACACTTTCTTT+TGG | 0.271432 | 3.3:-43632828 | None:intergenic |
| TCTACATGTCGGATATAATT+AGG | 0.288650 | 3.3:+43633032 | MS.gene027042:CDS |
| CCACAAAACCTCTTGTTATA+AGG | 0.323478 | 3.3:-43632905 | None:intergenic |
| TATAATTGTATTTGTAACTT+TGG | 0.337833 | 3.3:-43632963 | None:intergenic |
| AGAACAAAGAGAAGGTTATA+TGG | 0.364426 | 3.3:+43632842 | MS.gene027042:CDS |
| ACCGATGTTATATTCTATAA+AGG | 0.369663 | 3.3:+43633232 | MS.gene027042:CDS |
| CAAAGGTCAATTATCAAAAT+CGG | 0.402117 | 3.3:+43632765 | MS.gene027042:CDS |
| GGCTTATCTTGTGAAATCAT+TGG | 0.406267 | 3.3:+43633372 | MS.gene027042:CDS |
| CATTCCTAATGTTGTTTCTC+CGG | 0.418552 | 3.3:+43633327 | MS.gene027042:CDS |
| TCTGCTAAATCCTTTCAAAC+AGG | 0.421433 | 3.3:+43632988 | MS.gene027042:CDS |
| TCAGCGTGGTATGCAAGAAT+TGG | 0.424757 | 3.3:+43632732 | MS.gene027042:CDS |
| TAATCATGTGGCCTAGTTGT+AGG | 0.431478 | 3.3:-43633106 | None:intergenic |
| TAGTCTATGCTGTGGGTTGG+TGG | 0.434022 | 3.3:+43633257 | MS.gene027042:CDS |
| ATTATATCCGACATGTAGAT+AGG | 0.442904 | 3.3:-43633028 | None:intergenic |
| CTTTGCTAGCCAACCATGAC+TGG | 0.448989 | 3.3:-43632930 | None:intergenic |
| TGTCTCGCTTTCATAAAATC+TGG | 0.450132 | 3.3:+43633166 | MS.gene027042:CDS |
| TCTTCTCAATGGAGGCAGAT+TGG | 0.454302 | 3.3:+43632639 | None:intergenic |
| TTATGAATGTAAAGTGCATA+AGG | 0.479221 | 3.3:+43633066 | MS.gene027042:CDS |
| GAACAAAGAGAAGGTTATAT+GGG | 0.483307 | 3.3:+43632843 | MS.gene027042:CDS |
| TAATGTTGTTTCTCCGGAGG+GGG | 0.487050 | 3.3:+43633333 | MS.gene027042:CDS |
| ACATGTAGATAGGTGGTAAA+GGG | 0.494359 | 3.3:-43633018 | None:intergenic |
| CCCTCCGGAGAAACAACATT+AGG | 0.500061 | 3.3:-43633331 | None:intergenic |
| TTGATAATTGACCTTTGCAA+TGG | 0.519800 | 3.3:-43632759 | None:intergenic |
| GACATGTAGATAGGTGGTAA+AGG | 0.520441 | 3.3:-43633019 | None:intergenic |
| GGGATGGAAACCTGTTTGAA+AGG | 0.525110 | 3.3:-43632998 | None:intergenic |
| CCTAATGTTGTTTCTCCGGA+GGG | 0.527562 | 3.3:+43633331 | MS.gene027042:CDS |
| TTTGTGGCTCCAGTCATGGT+TGG | 0.527925 | 3.3:+43632921 | MS.gene027042:CDS |
| GCCTAGTCTATGCTGTGGGT+TGG | 0.537826 | 3.3:+43633254 | MS.gene027042:CDS |
| TTATCTTGTGAAATCATTGG+AGG | 0.548164 | 3.3:+43633375 | MS.gene027042:CDS |
| TCCTAATGTTGTTTCTCCGG+AGG | 0.554077 | 3.3:+43633330 | MS.gene027042:CDS |
| TTTGGTGGGAATCATTAGCA+TGG | 0.559241 | 3.3:-43632810 | None:intergenic |
| GAAAGTGTAGAACAAAGAGA+AGG | 0.562266 | 3.3:+43632834 | MS.gene027042:CDS |
| CTAATGTTGTTTCTCCGGAG+GGG | 0.563359 | 3.3:+43633332 | MS.gene027042:CDS |
| CAGTCATGGTTGGCTAGCAA+AGG | 0.570941 | 3.3:+43632931 | MS.gene027042:CDS |
| GTAGATAGGTGGTAAAGGGA+TGG | 0.572882 | 3.3:-43633014 | None:intergenic |
| TATCGGCTAATCCTACAACT+AGG | 0.572975 | 3.3:+43633095 | MS.gene027042:CDS |
| TTGATGTGCCTTATAACAAG+AGG | 0.579292 | 3.3:+43632897 | MS.gene027042:CDS |
| TTGGTGGGAATCATTAGCAT+GGG | 0.584462 | 3.3:-43632809 | None:intergenic |
| GTGTTACTCGAAGGATGAGA+AGG | 0.591492 | 3.3:+43633303 | MS.gene027042:CDS |
| TATCTTGTGAAATCATTGGA+GGG | 0.603454 | 3.3:+43633376 | MS.gene027042:CDS |
| TCATGGTTGGCTAGCAAAGG+CGG | 0.620668 | 3.3:+43632934 | MS.gene027042:CDS |
| GAATTGGTATTCCATTGCAA+AGG | 0.622427 | 3.3:+43632748 | MS.gene027042:CDS |
| AAAGGCCTAGTCTATGCTGT+GGG | 0.634832 | 3.3:+43633250 | MS.gene027042:CDS |
| AATCATTGGAGGGAGACTTG+TGG | 0.640759 | 3.3:+43633386 | MS.gene027042:CDS |
| TAAAGGCCTAGTCTATGCTG+TGG | 0.643845 | 3.3:+43633249 | MS.gene027042:CDS |
| TTTACCACCTATCTACATGT+CGG | 0.651760 | 3.3:+43633021 | MS.gene027042:CDS |
| ACCAACCCACAGCATAGACT+AGG | 0.655708 | 3.3:-43633255 | None:intergenic |
| ATATCCGACATGTAGATAGG+TGG | 0.675448 | 3.3:-43633025 | None:intergenic |
| GCCTTTATAGAATATAACAT+CGG | 0.679693 | 3.3:-43633233 | None:intergenic |
| GCTACAGCAACATAATCATG+TGG | 0.697559 | 3.3:-43633118 | None:intergenic |
| AGATCACATATATTTCAGCG+TGG | 0.757762 | 3.3:+43632718 | MS.gene027042:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATTGTATTTGTAACTT+TGG | - | chr3.3:43632966-43632985 | None:intergenic | 15.0% |
| !! | GGAATTTATAATGTAAAAGA+TGG | + | chr3.3:43633775-43633794 | MS.gene027042:intron | 20.0% |
| !! | TTATAAATTCCCATATCAAA+CGG | - | chr3.3:43633766-43633785 | None:intergenic | 20.0% |
| !!! | AATGTTAAAACTTGATAGTT+TGG | + | chr3.3:43633603-43633622 | MS.gene027042:intron | 20.0% |
| !!! | ATGTTAAAACTTGATAGTTT+GGG | + | chr3.3:43633604-43633623 | MS.gene027042:intron | 20.0% |
| !!! | TTGCAACTTATAAATTGTTT+TGG | - | chr3.3:43632876-43632895 | None:intergenic | 20.0% |
| ! | ACCGATGTTATATTCTATAA+AGG | + | chr3.3:43633232-43633251 | MS.gene027042:CDS | 25.0% |
| ! | ATGCACTTTACATTCATAAT+TGG | - | chr3.3:43633065-43633084 | None:intergenic | 25.0% |
| ! | CAAAGGTCAATTATCAAAAT+CGG | + | chr3.3:43632765-43632784 | MS.gene027042:CDS | 25.0% |
| ! | GCCTTTATAGAATATAACAT+CGG | - | chr3.3:43633236-43633255 | None:intergenic | 25.0% |
| ! | TTATGAATGTAAAGTGCATA+AGG | + | chr3.3:43633066-43633085 | MS.gene027042:CDS | 25.0% |
| !! | TAAAATCTGGACAAAACTTT+TGG | + | chr3.3:43633179-43633198 | MS.gene027042:CDS | 25.0% |
| !!! | AAGTTTGATTTTTGACAAGT+TGG | + | chr3.3:43632685-43632704 | MS.gene027042:CDS | 25.0% |
| !!! | AGTGCATAAGGTTATTTTAT+CGG | + | chr3.3:43633078-43633097 | MS.gene027042:CDS | 25.0% |
| !!! | TTTTAATTTGTGTTACTCGA+AGG | + | chr3.3:43633294-43633313 | MS.gene027042:CDS | 25.0% |
| AGAACAAAGAGAAGGTTATA+TGG | + | chr3.3:43632842-43632861 | MS.gene027042:CDS | 30.0% | |
| ATTATATCCGACATGTAGAT+AGG | - | chr3.3:43633031-43633050 | None:intergenic | 30.0% | |
| CAATGAATCTGTATCTATGT+CGG | + | chr3.3:43633651-43633670 | MS.gene027042:intron | 30.0% | |
| GAACAAAGAGAAGGTTATAT+GGG | + | chr3.3:43632843-43632862 | MS.gene027042:CDS | 30.0% | |
| TATCTTGTGAAATCATTGGA+GGG | + | chr3.3:43633376-43633395 | MS.gene027042:CDS | 30.0% | |
| TCTACATGTCGGATATAATT+AGG | + | chr3.3:43633032-43633051 | MS.gene027042:CDS | 30.0% | |
| TTATCTTGTGAAATCATTGG+AGG | + | chr3.3:43633375-43633394 | MS.gene027042:CDS | 30.0% | |
| TTGGAATTAGATCTTCAAAG+TGG | + | chr3.3:43633568-43633587 | MS.gene027042:intron | 30.0% | |
| ! | CATATTTGAAGTCTACAAGT+TGG | + | chr3.3:43633549-43633568 | MS.gene027042:intron | 30.0% |
| ! | CTTTGTTCTACACTTTCTTT+TGG | - | chr3.3:43632831-43632850 | None:intergenic | 30.0% |
| ! | TGGCTTGTAAGAAAATATGT+TGG | + | chr3.3:43633406-43633425 | MS.gene027042:intron | 30.0% |
| ! | TTGATAATTGACCTTTGCAA+TGG | - | chr3.3:43632762-43632781 | None:intergenic | 30.0% |
| AATATGCTAGTACCACTACT+AGG | - | chr3.3:43633535-43633554 | None:intergenic | 35.0% | |
| ACATGTAGATAGGTGGTAAA+GGG | - | chr3.3:43633021-43633040 | None:intergenic | 35.0% | |
| AGATCACATATATTTCAGCG+TGG | + | chr3.3:43632718-43632737 | MS.gene027042:CDS | 35.0% | |
| GAATTGGTATTCCATTGCAA+AGG | + | chr3.3:43632748-43632767 | MS.gene027042:CDS | 35.0% | |
| GGCTTATCTTGTGAAATCAT+TGG | + | chr3.3:43633372-43633391 | MS.gene027042:CDS | 35.0% | |
| TCTGCTAAATCCTTTCAAAC+AGG | + | chr3.3:43632988-43633007 | MS.gene027042:CDS | 35.0% | |
| TGTCTCGCTTTCATAAAATC+TGG | + | chr3.3:43633166-43633185 | MS.gene027042:CDS | 35.0% | |
| TTGATGTGCCTTATAACAAG+AGG | + | chr3.3:43632897-43632916 | MS.gene027042:CDS | 35.0% | |
| TTTACCACCTATCTACATGT+CGG | + | chr3.3:43633021-43633040 | MS.gene027042:CDS | 35.0% | |
| ! | AGATTTTATGAAAGCGAGAC+AGG | - | chr3.3:43633167-43633186 | None:intergenic | 35.0% |
| ! | CCACAAAACCTCTTGTTATA+AGG | - | chr3.3:43632908-43632927 | None:intergenic | 35.0% |
| ! | CCTTATAACAAGAGGTTTTG+TGG | + | chr3.3:43632905-43632924 | MS.gene027042:CDS | 35.0% |
| ! | GAAAGTGTAGAACAAAGAGA+AGG | + | chr3.3:43632834-43632853 | MS.gene027042:CDS | 35.0% |
| ! | GATGATGATGATGATGATGA+TGG | + | chr3.3:43633487-43633506 | MS.gene027042:intron | 35.0% |
| ! | GTTCTACACTTTCTTTTGGT+GGG | - | chr3.3:43632827-43632846 | None:intergenic | 35.0% |
| ! | TGTTCTACACTTTCTTTTGG+TGG | - | chr3.3:43632828-43632847 | None:intergenic | 35.0% |
| ! | TTTCTCGATGATGATGATGA+TGG | + | chr3.3:43633430-43633449 | MS.gene027042:intron | 35.0% |
| !! | CATTCCTAATGTTGTTTCTC+CGG | + | chr3.3:43633327-43633346 | MS.gene027042:CDS | 35.0% |
| !!! | GGAGACAACGTTTTATTTGT+GGG | + | chr3.3:43633625-43633644 | MS.gene027042:intron | 35.0% |
| ATATCCGACATGTAGATAGG+TGG | - | chr3.3:43633028-43633047 | None:intergenic | 40.0% | |
| CCATATCAAACGGTCCATTA+GGG | - | chr3.3:43633756-43633775 | None:intergenic | 40.0% | |
| GACATGTAGATAGGTGGTAA+AGG | - | chr3.3:43633022-43633041 | None:intergenic | 40.0% | |
| GCTACAGCAACATAATCATG+TGG | - | chr3.3:43633121-43633140 | None:intergenic | 40.0% | |
| GGAGGCAGATTGGAAAAATT+TGG | + | chr3.3:43632649-43632668 | MS.gene027042:CDS | 40.0% | |
| GTCAACATTGCCGTTATCAT+TGG | + | chr3.3:43633806-43633825 | MS.gene027042:intron | 40.0% | |
| TAATCATGTGGCCTAGTTGT+AGG | - | chr3.3:43633109-43633128 | None:intergenic | 40.0% | |
| TCCGTGTGAACCAATGATAA+CGG | - | chr3.3:43633819-43633838 | None:intergenic | 40.0% | |
| TTGGTGGGAATCATTAGCAT+GGG | - | chr3.3:43632812-43632831 | None:intergenic | 40.0% | |
| TTTGGTGGGAATCATTAGCA+TGG | - | chr3.3:43632813-43632832 | None:intergenic | 40.0% | |
| ! | CCTAATGGACCGTTTGATAT+GGG | + | chr3.3:43633754-43633773 | MS.gene027042:intron | 40.0% |
| ! | TATCGGCTAATCCTACAACT+AGG | + | chr3.3:43633095-43633114 | MS.gene027042:CDS | 40.0% |
| !! | GATGATGATGGTGATGATGA+TGG | + | chr3.3:43633442-43633461 | MS.gene027042:intron | 40.0% |
| !!! | GGGAGACAACGTTTTATTTG+TGG | + | chr3.3:43633624-43633643 | MS.gene027042:intron | 40.0% |
| AAAGGCCTAGTCTATGCTGT+GGG | + | chr3.3:43633250-43633269 | MS.gene027042:CDS | 45.0% | |
| AATCATTGGAGGGAGACTTG+TGG | + | chr3.3:43633386-43633405 | MS.gene027042:CDS | 45.0% | |
| AGGGGGATGATTATGCTCAT+CGG | + | chr3.3:43633350-43633369 | MS.gene027042:CDS | 45.0% | |
| CCCATATCAAACGGTCCATT+AGG | - | chr3.3:43633757-43633776 | None:intergenic | 45.0% | |
| GGGATGGAAACCTGTTTGAA+AGG | - | chr3.3:43633001-43633020 | None:intergenic | 45.0% | |
| GGTCCATTAGGGTAAGGAAT+CGG | - | chr3.3:43633745-43633764 | None:intergenic | 45.0% | |
| GTAGATAGGTGGTAAAGGGA+TGG | - | chr3.3:43633017-43633036 | None:intergenic | 45.0% | |
| TAAAGGCCTAGTCTATGCTG+TGG | + | chr3.3:43633249-43633268 | MS.gene027042:CDS | 45.0% | |
| TCAAACGGTCCATTAGGGTA+AGG | - | chr3.3:43633751-43633770 | None:intergenic | 45.0% | |
| TCAGCGTGGTATGCAAGAAT+TGG | + | chr3.3:43632732-43632751 | MS.gene027042:CDS | 45.0% | |
| ! | CCCTAATGGACCGTTTGATA+TGG | + | chr3.3:43633753-43633772 | MS.gene027042:intron | 45.0% |
| ! | GGTGGTGATGATGATGATGA+TGG | + | chr3.3:43633463-43633482 | MS.gene027042:intron | 45.0% |
| ! | GTGTTACTCGAAGGATGAGA+AGG | + | chr3.3:43633303-43633322 | MS.gene027042:CDS | 45.0% |
| !! | CCTAATGTTGTTTCTCCGGA+GGG | + | chr3.3:43633331-43633350 | MS.gene027042:CDS | 45.0% |
| !! | CTAATGTTGTTTCTCCGGAG+GGG | + | chr3.3:43633332-43633351 | MS.gene027042:CDS | 45.0% |
| !! | GATGATGGTGATGATGATGG+TGG | + | chr3.3:43633445-43633464 | MS.gene027042:intron | 45.0% |
| !! | GCCGTTATCATTGGTTCACA+CGG | + | chr3.3:43633815-43633834 | MS.gene027042:intron | 45.0% |
| !! | GGTGTTAACTTGCCTAGTAG+TGG | + | chr3.3:43633520-43633539 | MS.gene027042:intron | 45.0% |
| !! | TAATGTTGTTTCTCCGGAGG+GGG | + | chr3.3:43633333-43633352 | MS.gene027042:CDS | 45.0% |
| !! | TCCTAATGTTGTTTCTCCGG+AGG | + | chr3.3:43633330-43633349 | MS.gene027042:CDS | 45.0% |
| ACCAACCCACAGCATAGACT+AGG | - | chr3.3:43633258-43633277 | None:intergenic | 50.0% | |
| CCCTCCGGAGAAACAACATT+AGG | - | chr3.3:43633334-43633353 | None:intergenic | 50.0% | |
| CTTTGCTAGCCAACCATGAC+TGG | - | chr3.3:43632933-43632952 | None:intergenic | 50.0% | |
| GGGGGATGATTATGCTCATC+GGG | + | chr3.3:43633351-43633370 | MS.gene027042:CDS | 50.0% | |
| TGAGCATAATCATCCCCCTC+CGG | - | chr3.3:43633349-43633368 | None:intergenic | 50.0% | |
| TTTGTGGCTCCAGTCATGGT+TGG | + | chr3.3:43632921-43632940 | MS.gene027042:CDS | 50.0% | |
| ! | CAGTCATGGTTGGCTAGCAA+AGG | + | chr3.3:43632931-43632950 | MS.gene027042:CDS | 50.0% |
| ! | GGGTTCTTCCACCTTTTCAG+TGG | + | chr3.3:43633854-43633873 | MS.gene027042:intron | 50.0% |
| ! | TCATGGTTGGCTAGCAAAGG+CGG | + | chr3.3:43632934-43632953 | MS.gene027042:CDS | 50.0% |
| !! | AGGTTTTGTGGCTCCAGTCA+TGG | + | chr3.3:43632917-43632936 | MS.gene027042:CDS | 50.0% |
| !! | GCACCGATTCCTTACCCTAA+TGG | + | chr3.3:43633739-43633758 | MS.gene027042:intron | 50.0% |
| !! | TAGTCTATGCTGTGGGTTGG+TGG | + | chr3.3:43633257-43633276 | MS.gene027042:CDS | 50.0% |
| ACGGATGCCACCTGCACTAT+GGG | + | chr3.3:43633834-43633853 | MS.gene027042:intron | 55.0% | |
| GCCTAGTCTATGCTGTGGGT+TGG | + | chr3.3:43633254-43633273 | MS.gene027042:CDS | 55.0% | |
| GGAAGAACCCATAGTGCAGG+TGG | - | chr3.3:43633844-43633863 | None:intergenic | 55.0% | |
| GGTGGAAGAACCCATAGTGC+AGG | - | chr3.3:43633847-43633866 | None:intergenic | 55.0% | |
| CACGGATGCCACCTGCACTA+TGG | + | chr3.3:43633833-43633852 | MS.gene027042:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 43632647 | 43633882 | 43632647 | ID=MS.gene027042 |
| chr3.3 | mRNA | 43632647 | 43633882 | 43632647 | ID=MS.gene027042.t1;Parent=MS.gene027042 |
| chr3.3 | exon | 43632647 | 43633411 | 43632647 | ID=MS.gene027042.t1.exon1;Parent=MS.gene027042.t1 |
| chr3.3 | CDS | 43632647 | 43633411 | 43632647 | ID=cds.MS.gene027042.t1;Parent=MS.gene027042.t1 |
| chr3.3 | exon | 43633874 | 43633882 | 43633874 | ID=MS.gene027042.t1.exon2;Parent=MS.gene027042.t1 |
| chr3.3 | CDS | 43633874 | 43633882 | 43633874 | ID=cds.MS.gene027042.t1;Parent=MS.gene027042.t1 |
| Gene Sequence |
| Protein sequence |
