AlfalfaGEDB | MS.gene76061

M. sativa cultivar XinJiangDaYe / MS.gene76061

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene76061.t1	RHN57146.1	91.7	254	21	0	74	327	1	254	3.70E-134	488

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene76061.t1	A0A396HUX2	91.7	254	21	0	74	327	1	254	2.6e-134	488.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052447	MS.gene76061	0.865925	4.15E-65	-1.69E-46
MS.gene05329	MS.gene76061	0.803823	2.90E-49	-1.69E-46
MS.gene054174	MS.gene76061	0.808292	3.33E-50	-1.69E-46
MS.gene054175	MS.gene76061	0.803285	3.75E-49	-1.69E-46
MS.gene055058	MS.gene76061	0.801646	8.16E-49	-1.69E-46
MS.gene055952	MS.gene76061	0.827527	1.49E-54	-1.69E-46
MS.gene058294	MS.gene76061	0.806649	7.43E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene76061	MS.gene032785	PPI
MS.gene76061	MS.gene97317	PPI
MS.gene76061	MS.gene27747	PPI
MS.gene76061	MS.gene42224	PPI
MS.gene76061	MS.gene27754	PPI
MS.gene42430	MS.gene76061	PPI
MS.gene76061	MS.gene73726	PPI
MS.gene76061	MS.gene035135	PPI
MS.gene76061	MS.gene27748	PPI
MS.gene27753	MS.gene76061	PPI
MS.gene76061	MS.gene27637	PPI
MS.gene99024	MS.gene76061	PPI
MS.gene023891	MS.gene76061	PPI
MS.gene76061	MS.gene023784	PPI
MS.gene76061	MS.gene52254	PPI
MS.gene035137	MS.gene76061	PPI
MS.gene76061	MS.gene023890	PPI
MS.gene76061	MS.gene023888	PPI
MS.gene032784	MS.gene76061	PPI
MS.gene76061	MS.gene99023	PPI
MS.gene76061	MS.gene52259	PPI
MS.gene041287	MS.gene76061	PPI
MS.gene27745	MS.gene76061	PPI
MS.gene76061	MS.gene035137	PPI
MS.gene76061	MS.gene44542	PPI
MS.gene027042	MS.gene76061	PPI
MS.gene76061	MS.gene73460	PPI
MS.gene76061	MS.gene43191	PPI
MS.gene76061	MS.gene49592	PPI
MS.gene76061	MS.gene94239	PPI
MS.gene76061	MS.gene023892	PPI
MS.gene76061	MS.gene73723	PPI
MS.gene29651	MS.gene76061	PPI
MS.gene76061	MS.gene023785	PPI
MS.gene76061	MS.gene032784	PPI
MS.gene76061	MS.gene95450	PPI
MS.gene86085	MS.gene76061	PPI
MS.gene76061	MS.gene52262	PPI
MS.gene76061	MS.gene49594	PPI
MS.gene29654	MS.gene76061	PPI
MS.gene76061	MS.gene29654	PPI
MS.gene023785	MS.gene76061	PPI
MS.gene032780	MS.gene76061	PPI
MS.gene066291	MS.gene76061	PPI
MS.gene022086	MS.gene76061	PPI
MS.gene76061	MS.gene52253	PPI
MS.gene76061	MS.gene52255	PPI
MS.gene76061	MS.gene42431	PPI
MS.gene76061	MS.gene86085	PPI
MS.gene27749	MS.gene76061	PPI
MS.gene76061	MS.gene27639	PPI
MS.gene76061	MS.gene22627	PPI
MS.gene76061	MS.gene031136	PPI
MS.gene76061	MS.gene46208	PPI
MS.gene76061	MS.gene023787	PPI
MS.gene52697	MS.gene76061	PPI
MS.gene023787	MS.gene76061	PPI
MS.gene76061	MS.gene027042	PPI
MS.gene76061	MS.gene42433	PPI
MS.gene76061	MS.gene023893	PPI
MS.gene76061	MS.gene42432	PPI
MS.gene76061	MS.gene49593	PPI
MS.gene76061	MS.gene27635	PPI
MS.gene066292	MS.gene76061	PPI
MS.gene023889	MS.gene76061	PPI
MS.gene029514	MS.gene76061	PPI
MS.gene066289	MS.gene76061	PPI
MS.gene76061	MS.gene42429	PPI
MS.gene76061	MS.gene52913	PPI
MS.gene76061	MS.gene52261	PPI
MS.gene52258	MS.gene76061	PPI
MS.gene76061	MS.gene031137	PPI
MS.gene76061	MS.gene99022	PPI
MS.gene76061	MS.gene27751	PPI
MS.gene76061	MS.gene42223	PPI
MS.gene52163	MS.gene76061	PPI
MS.gene76061	MS.gene42428	PPI
MS.gene42222	MS.gene76061	PPI
MS.gene99022	MS.gene76061	PPI
MS.gene76061	MS.gene42226	PPI
MS.gene023893	MS.gene76061	PPI
MS.gene76061	MS.gene94237	PPI
MS.gene76061	MS.gene52263	PPI
MS.gene76061	MS.gene76056	PPI
MS.gene76061	MS.gene52166	PPI
MS.gene76061	MS.gene52164	PPI
MS.gene76061	MS.gene85826	PPI
MS.gene76061	MS.gene023887	PPI
MS.gene27750	MS.gene76061	PPI
MS.gene52253	MS.gene76061	PPI
MS.gene76061	MS.gene76059	PPI
MS.gene76061	MS.gene27636	PPI
MS.gene76061	MS.gene85835	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene76061.t1	MTR_5g082780	90.909	231	21	0	98	328	1	231	2.74e-153	431
MS.gene76061.t1	MTR_5g082770	63.605	294	93	5	1	284	1	290	1.03e-119	348
MS.gene76061.t1	MTR_5g038260	45.953	383	179	10	1	359	3	381	2.10e-103	310
MS.gene76061.t1	MTR_1g064570	43.781	402	179	10	1	359	1	398	7.85e-101	303
MS.gene76061.t1	MTR_5g038230	46.257	374	165	10	1	359	1	353	2.78e-99	298
MS.gene76061.t1	MTR_1g108740	42.553	376	160	11	4	359	5	344	4.36e-84	259
MS.gene76061.t1	MTR_7g077620	41.162	396	167	14	2	359	3	370	6.98e-75	236
MS.gene76061.t1	MTR_7g077660	41.878	394	161	18	3	359	4	366	1.72e-73	232
MS.gene76061.t1	MTR_7g077650	40.299	402	160	17	2	358	3	369	9.95e-71	225
MS.gene76061.t1	MTR_1g016150	45.405	185	74	5	4	171	5	179	1.10e-40	143
MS.gene76061.t1	MTR_1g016150	47.436	78	32	1	219	296	168	236	4.68e-13	68.6
MS.gene76061.t1	MTR_7g076110	35.144	313	154	13	73	359	22	311	2.37e-36	134
MS.gene76061.t1	MTR_7g076100	39.676	247	111	10	133	359	70	298	2.92e-36	133
MS.gene76061.t1	MTR_1g108750	45.695	151	54	3	1	150	1	124	1.64e-27	105
MS.gene76061.t1	MTR_3g114990	25.980	408	232	16	1	357	20	408	1.86e-20	92.0
MS.gene76061.t1	MTR_3g114970	26.854	391	214	23	1	357	1	353	1.83e-16	80.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 71 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTAATCTCATTGGAAATT+TGG	0.118149	5.2:+70761639	None:intergenic
GGAACTAGATTGGGCAAATT+TGG	0.170985	5.2:-70762702	MS.gene76061:CDS
TAGCATTTGTTTAAAATTTC+CGG	0.173834	5.2:+70761920	None:intergenic
TAAGAATTTGGCAATTTAAA+TGG	0.183830	5.2:+70762479	None:intergenic
AGCGGCAGCCACCACCTTTC+TGG	0.185311	5.2:-70761668	MS.gene76061:CDS
TAATCATTTGGTCTTGTTAT+AGG	0.187600	5.2:+70762284	None:intergenic
TACAAACATCTTTCTGTTCT+TGG	0.199967	5.2:+70762527	None:intergenic
GAGCTGGAGTCATTCCTTTA+TGG	0.214315	5.2:-70762174	MS.gene76061:CDS
TTTATGGATGTTATGTTCTA+TGG	0.218295	5.2:-70762158	MS.gene76061:CDS
CAAATATGGTAATAAGAATT+TGG	0.251801	5.2:+70762467	None:intergenic
CAAATAGATCACATTTGTTT+TGG	0.278174	5.2:-70762638	MS.gene76061:CDS
GGCTAAATCCACAACAAATA+TGG	0.289458	5.2:+70762453	None:intergenic
AATCATTTGGTCTTGTTATA+GGG	0.294407	5.2:+70762285	None:intergenic
AACAAGACCAAATGATTATA+TGG	0.314220	5.2:-70762279	MS.gene76061:CDS
ACTTGTGGTCCATTTCATAT+AGG	0.341950	5.2:-70761753	MS.gene76061:CDS
GCTATGTCCTGAATTGGATT+TGG	0.346401	5.2:+70762065	None:intergenic
TTCTAAACCGCTGATCTTGA+TGG	0.357058	5.2:+70762576	None:intergenic
TGAAAAGCTATGTCCTGAAT+TGG	0.358033	5.2:+70762059	None:intergenic
GCGGCAGCCACCACCTTTCT+GGG	0.359418	5.2:-70761667	MS.gene76061:CDS
GATAACTCCAAATCCAATTC+AGG	0.366133	5.2:-70762072	MS.gene76061:CDS
TCGAGGGTTGGAAGACTAAT+AGG	0.372920	5.2:+70762362	None:intergenic
ACAAACATCTTTCTGTTCTT+GGG	0.381418	5.2:+70762528	None:intergenic
GCCGCAACCATATAATCATT+TGG	0.404338	5.2:+70762272	None:intergenic
GCAATTCACACTAGCATTCA+TGG	0.409604	5.2:-70762251	MS.gene76061:CDS
TGGTTAGAATGGAACTAGAT+TGG	0.415806	5.2:-70762712	None:intergenic
TGATTTAATTCTTGATAAGT+TGG	0.416195	5.2:-70762666	MS.gene76061:CDS
CTTGTGGTCCATTTCATATA+GGG	0.417934	5.2:-70761752	MS.gene76061:CDS
GGTTAGAATGGAACTAGATT+GGG	0.421888	5.2:-70762711	None:intergenic
TTATATATCCCTATATGAAA+TGG	0.424795	5.2:+70761744	None:intergenic
TTATCTTGTGAAATCATTAG+AGG	0.436221	5.2:-70762021	MS.gene76061:CDS
ATAGGAGCAACATTCTTAGA+AGG	0.444870	5.2:+70762380	None:intergenic
TGAATTCCAACTTGTACACT+TGG	0.447974	5.2:+70761952	None:intergenic
TTGGCGCCGTGTGCAAGAAT+TGG	0.448573	5.2:-70762619	MS.gene76061:CDS
ATAGAACATAACATCCATAA+AGG	0.458967	5.2:+70762160	None:intergenic
AGAAGGATGCAATAGTGTTA+TGG	0.460688	5.2:+70762397	None:intergenic
TGTTCTTGGGATCATTAGCA+TGG	0.462460	5.2:+70762541	None:intergenic
ATGCTAAAGCTTGAGAGTCT+TGG	0.465110	5.2:-70761903	MS.gene76061:CDS
TAAAAGCGGGCGAACCATGC+TGG	0.470666	5.2:-70762214	MS.gene76061:CDS
GTATCAGCTTCATACTTCTC+CGG	0.473456	5.2:-70761840	MS.gene76061:CDS
AACCATGCTGGACTTATGTA+TGG	0.481402	5.2:-70762202	MS.gene76061:CDS
TCTTATTACCATATTTGTTG+TGG	0.483010	5.2:-70762461	MS.gene76061:CDS
CTTATGTATGGAGCTTGAGC+TGG	0.493140	5.2:-70762190	MS.gene76061:CDS
TTTATCTGAGGTCGGGTACA+AGG	0.517119	5.2:-70762324	MS.gene76061:CDS
ACCAAATGATTATATGGTTG+CGG	0.517425	5.2:-70762273	MS.gene76061:CDS
TGATTTCCAAGTGTACAAGT+TGG	0.520656	5.2:-70761958	MS.gene76061:CDS
GTTGTGGATTTAGCCATGGT+TGG	0.523421	5.2:-70762445	MS.gene76061:CDS
GTGAAGATTATGATGATCAA+TGG	0.528142	5.2:+70761707	None:intergenic
ATACAAGTTTATCTGAGGTC+GGG	0.533775	5.2:-70762331	MS.gene76061:CDS
GGGATATATAATGTAAGAGA+TGG	0.535003	5.2:-70761732	MS.gene76061:CDS
TATACAAGTTTATCTGAGGT+CGG	0.543905	5.2:-70762332	MS.gene76061:CDS
ATTTGTTGTGGATTTAGCCA+TGG	0.546254	5.2:-70762449	MS.gene76061:CDS
ATGGATGTTATGTTCTATGG+AGG	0.548376	5.2:-70762155	MS.gene76061:CDS
AAATTTGGTAAAACCCAGAA+AGG	0.548520	5.2:+70761654	None:intergenic
GTTCTTGGGATCATTAGCAT+GGG	0.554796	5.2:+70762542	None:intergenic
TTGGAATTCAATGCTCAGAC+CGG	0.564684	5.2:-70761939	MS.gene76061:CDS
TATCTTGTGAAATCATTAGA+GGG	0.568311	5.2:-70762020	MS.gene76061:CDS
GGTAAAACCCAGAAAGGTGG+TGG	0.590899	5.2:+70761660	None:intergenic
ACAATCATTTCTTCAACAAG+CGG	0.597253	5.2:-70761686	MS.gene76061:CDS
TATGTTGCTAGTAAATATCA+CGG	0.603958	5.2:-70762125	MS.gene76061:CDS
CTATTGTTGCAAGCCAACCA+TGG	0.611822	5.2:+70762432	None:intergenic
AACTTGTATATGATCGATCG+AGG	0.611957	5.2:+70762345	None:intergenic
AAGTTAGATTGTGTAACTTG+TGG	0.613074	5.2:-70761768	MS.gene76061:CDS
ATCATATACAAGTTTATCTG+AGG	0.615631	5.2:-70762336	MS.gene76061:CDS
GTATATGATCGATCGAGGGT+TGG	0.616455	5.2:+70762350	None:intergenic
AGCTTAACCATCAAGATCAG+CGG	0.626714	5.2:-70762583	MS.gene76061:CDS
CTCCATACATAAGTCCAGCA+TGG	0.636983	5.2:+70762200	None:intergenic
AATCATTAGAGGGAGACTTG+TGG	0.640892	5.2:-70762010	MS.gene76061:CDS
TTTGGTAAAACCCAGAAAGG+TGG	0.643098	5.2:+70761657	None:intergenic
TAATCGCCAATTCTTGCACA+CGG	0.653587	5.2:+70762613	None:intergenic
ACTTGTATATGATCGATCGA+GGG	0.674359	5.2:+70762346	None:intergenic
ATTAGAGGGAGACTTGTGGA+TGG	0.690554	5.2:-70762006	MS.gene76061:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTAAATGGATACATTTTTT+TGG	+	chr5.2:70761861-70761880	None:intergenic	15.0%
!!	CAAATATGGTAATAAGAATT+TGG	+	chr5.2:70761887-70761906	None:intergenic	20.0%
!!	TAAGAATTTGGCAATTTAAA+TGG	+	chr5.2:70761875-70761894	None:intergenic	20.0%
!!	TGATTTAATTCTTGATAAGT+TGG	-	chr5.2:70761685-70761704	MS.gene76061:CDS	20.0%
!!	TTATATATCCCTATATGAAA+TGG	+	chr5.2:70762610-70762629	None:intergenic	20.0%
!!!	ATGTTTCGTTTTTATAAAAG+CGG	-	chr5.2:70762123-70762142	MS.gene76061:CDS	20.0%
!!!	TAGCATTTGTTTAAAATTTC+CGG	+	chr5.2:70762434-70762453	None:intergenic	20.0%
!	AACAAGACCAAATGATTATA+TGG	-	chr5.2:70762072-70762091	MS.gene76061:CDS	25.0%
!	ATAGAACATAACATCCATAA+AGG	+	chr5.2:70762194-70762213	None:intergenic	25.0%
!	ATCATATACAAGTTTATCTG+AGG	-	chr5.2:70762015-70762034	MS.gene76061:CDS	25.0%
!	TATCTTGTGAAATCATTAGA+GGG	-	chr5.2:70762331-70762350	MS.gene76061:CDS	25.0%
!	TATGTTGCTAGTAAATATCA+CGG	-	chr5.2:70762226-70762245	MS.gene76061:CDS	25.0%
!	TTATCTTGTGAAATCATTAG+AGG	-	chr5.2:70762330-70762349	MS.gene76061:CDS	25.0%
!	TTTATGGATGTTATGTTCTA+TGG	-	chr5.2:70762193-70762212	MS.gene76061:CDS	25.0%
!!	CAAATAGATCACATTTGTTT+TGG	-	chr5.2:70761713-70761732	MS.gene76061:CDS	25.0%
!!	GGTATAGTATCTTTTAATCT+TGG	-	chr5.2:70762247-70762266	MS.gene76061:CDS	25.0%
!!	TCTTATTACCATATTTGTTG+TGG	-	chr5.2:70761890-70761909	MS.gene76061:CDS	25.0%
!!!	AATCATTTGGTCTTGTTATA+GGG	+	chr5.2:70762069-70762088	None:intergenic	25.0%
!!!	TAATCATTTGGTCTTGTTAT+AGG	+	chr5.2:70762070-70762089	None:intergenic	25.0%
!!!	TGTTTCGTTTTTATAAAAGC+GGG	-	chr5.2:70762124-70762143	MS.gene76061:CDS	25.0%
	AAATTTGGTAAAACCCAGAA+AGG	+	chr5.2:70762700-70762719	None:intergenic	30.0%
	AAGTTAGATTGTGTAACTTG+TGG	-	chr5.2:70762583-70762602	MS.gene76061:CDS	30.0%
	ACAAACATCTTTCTGTTCTT+GGG	+	chr5.2:70761826-70761845	None:intergenic	30.0%
	ACAATCATTTCTTCAACAAG+CGG	-	chr5.2:70762665-70762684	MS.gene76061:CDS	30.0%
	ACCAAATGATTATATGGTTG+CGG	-	chr5.2:70762078-70762097	MS.gene76061:CDS	30.0%
	GGGATATATAATGTAAGAGA+TGG	-	chr5.2:70762619-70762638	MS.gene76061:CDS	30.0%
	GTGAAGATTATGATGATCAA+TGG	+	chr5.2:70762647-70762666	None:intergenic	30.0%
	TACAAACATCTTTCTGTTCT+TGG	+	chr5.2:70761827-70761846	None:intergenic	30.0%
!	CTTTTAATCTTGGTCATAAG+AGG	-	chr5.2:70762257-70762276	MS.gene76061:CDS	30.0%
!	TATACAAGTTTATCTGAGGT+CGG	-	chr5.2:70762019-70762038	MS.gene76061:CDS	30.0%
!!!	TGAATCTTTTTTCAGACAAC+CGG	+	chr5.2:70762533-70762552	None:intergenic	30.0%
	AACTTGTATATGATCGATCG+AGG	+	chr5.2:70762009-70762028	None:intergenic	35.0%
	ACTTGTATATGATCGATCGA+GGG	+	chr5.2:70762008-70762027	None:intergenic	35.0%
	ACTTGTGGTCCATTTCATAT+AGG	-	chr5.2:70762598-70762617	MS.gene76061:CDS	35.0%
	AGAAGGATGCAATAGTGTTA+TGG	+	chr5.2:70761957-70761976	None:intergenic	35.0%
	ATAGGAGCAACATTCTTAGA+AGG	+	chr5.2:70761974-70761993	None:intergenic	35.0%
	ATGGATGTTATGTTCTATGG+AGG	-	chr5.2:70762196-70762215	MS.gene76061:CDS	35.0%
	CTTGTGGTCCATTTCATATA+GGG	-	chr5.2:70762599-70762618	MS.gene76061:CDS	35.0%
	GATAACTCCAAATCCAATTC+AGG	-	chr5.2:70762279-70762298	MS.gene76061:CDS	35.0%
	GGCTAAATCCACAACAAATA+TGG	+	chr5.2:70761901-70761920	None:intergenic	35.0%
	TGAAAAGCTATGTCCTGAAT+TGG	+	chr5.2:70762295-70762314	None:intergenic	35.0%
	TGAATTCCAACTTGTACACT+TGG	+	chr5.2:70762402-70762421	None:intergenic	35.0%
	TGATTTCCAAGTGTACAAGT+TGG	-	chr5.2:70762393-70762412	MS.gene76061:CDS	35.0%
!	ATACAAGTTTATCTGAGGTC+GGG	-	chr5.2:70762020-70762039	MS.gene76061:CDS	35.0%
!	ATTCAGGACATAGCTTTTCA+TGG	-	chr5.2:70762295-70762314	MS.gene76061:CDS	35.0%
!	GCTTTTCATGGAAGGTTTAA+AGG	-	chr5.2:70762307-70762326	MS.gene76061:CDS	35.0%
!!	ATTTGTTGTGGATTTAGCCA+TGG	-	chr5.2:70761902-70761921	MS.gene76061:CDS	35.0%
!!	GGAGACAATGTTTTGTTCTT+AGG	-	chr5.2:70762469-70762488	MS.gene76061:CDS	35.0%
	AACCATGCTGGACTTATGTA+TGG	-	chr5.2:70762149-70762168	MS.gene76061:CDS	40.0%
	AATCATTAGAGGGAGACTTG+TGG	-	chr5.2:70762341-70762360	MS.gene76061:CDS	40.0%
	AGCTTAACCATCAAGATCAG+CGG	-	chr5.2:70761768-70761787	MS.gene76061:CDS	40.0%
	ATGCTAAAGCTTGAGAGTCT+TGG	-	chr5.2:70762448-70762467	MS.gene76061:CDS	40.0%
	GCAATTCACACTAGCATTCA+TGG	-	chr5.2:70762100-70762119	MS.gene76061:CDS	40.0%
	GCCGCAACCATATAATCATT+TGG	+	chr5.2:70762082-70762101	None:intergenic	40.0%
	GCTATGTCCTGAATTGGATT+TGG	+	chr5.2:70762289-70762308	None:intergenic	40.0%
	GGAACTAGATTGGGCAAATT+TGG	-	chr5.2:70761649-70761668	MS.gene76061:CDS	40.0%
	GTATCAGCTTCATACTTCTC+CGG	-	chr5.2:70762511-70762530	MS.gene76061:CDS	40.0%
	GTTCTTGGGATCATTAGCAT+GGG	+	chr5.2:70761812-70761831	None:intergenic	40.0%
	TAATCGCCAATTCTTGCACA+CGG	+	chr5.2:70761741-70761760	None:intergenic	40.0%
	TGTTCTTGGGATCATTAGCA+TGG	+	chr5.2:70761813-70761832	None:intergenic	40.0%
	TTCTAAACCGCTGATCTTGA+TGG	+	chr5.2:70761778-70761797	None:intergenic	40.0%
	TTGGAATTCAATGCTCAGAC+CGG	-	chr5.2:70762412-70762431	MS.gene76061:CDS	40.0%
	TTTGGTAAAACCCAGAAAGG+TGG	+	chr5.2:70762697-70762716	None:intergenic	40.0%
!	AGGACATAGCTTTTCATGGA+AGG	-	chr5.2:70762299-70762318	MS.gene76061:CDS	40.0%
	ATTAGAGGGAGACTTGTGGA+TGG	-	chr5.2:70762345-70762364	MS.gene76061:CDS	45.0%
	CTATTGTTGCAAGCCAACCA+TGG	+	chr5.2:70761922-70761941	None:intergenic	45.0%
	CTCCATACATAAGTCCAGCA+TGG	+	chr5.2:70762154-70762173	None:intergenic	45.0%
	CTTATGTATGGAGCTTGAGC+TGG	-	chr5.2:70762161-70762180	MS.gene76061:CDS	45.0%
	GAGCTGGAGTCATTCCTTTA+TGG	-	chr5.2:70762177-70762196	MS.gene76061:CDS	45.0%
	GTATATGATCGATCGAGGGT+TGG	+	chr5.2:70762004-70762023	None:intergenic	45.0%
	GTTGTGGATTTAGCCATGGT+TGG	-	chr5.2:70761906-70761925	MS.gene76061:CDS	45.0%
	TCGAGGGTTGGAAGACTAAT+AGG	+	chr5.2:70761992-70762011	None:intergenic	45.0%
!	TTTATCTGAGGTCGGGTACA+AGG	-	chr5.2:70762027-70762046	MS.gene76061:CDS	45.0%
	GGTAAAACCCAGAAAGGTGG+TGG	+	chr5.2:70762694-70762713	None:intergenic	50.0%
	TAAAAGCGGGCGAACCATGC+TGG	-	chr5.2:70762137-70762156	MS.gene76061:CDS	55.0%
	TTGGCGCCGTGTGCAAGAAT+TGG	-	chr5.2:70761732-70761751	MS.gene76061:CDS	55.0%
	AGCGGCAGCCACCACCTTTC+TGG	-	chr5.2:70762683-70762702	MS.gene76061:CDS	65.0%
	GCGGCAGCCACCACCTTTCT+GGG	-	chr5.2:70762684-70762703	MS.gene76061:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	70761647	70762726	70761647	ID=MS.gene76061
chr5.2	mRNA	70761647	70762726	70761647	ID=MS.gene76061.t1;Parent=MS.gene76061
chr5.2	exon	70761647	70762726	70761647	ID=MS.gene76061.t1.exon1;Parent=MS.gene76061.t1
chr5.2	CDS	70761647	70762726	70761647	ID=cds.MS.gene76061.t1;Parent=MS.gene76061.t1

Gene Sequence

>MS.gene76061

ATGGAACTAGATTGGGCAAATTTGGAAGCACTTGCACTTGATTTAATTCTTGATAAGTTGGAAGAACAAATAGATCACATTTGTTTTGGCGCCGTGTGCAAGAATTGGCGATTAATTGCAAAGCTTAACCATCAAGATCAGCGGTTTAGAACTCATGTACTACCCATGCTAATGATCCCAAGAACAGAAAGATGTTTGTATAGCATTTCAGCCAAAAAAATGTATCCATTTAAATTGCCAAATTCTTATTACCATATTTGTTGTGGATTTAGCCATGGTTGGCTTGCAACAATAGATAAAAGTCATGCCATAACACTATTGCATCCTTCTAAGAATGTTGCTCCTATTAGTCTTCCAACCCTCGATCGATCATATACAAGTTTATCTGAGGTCGGGTACAAGGTCACTCTTTCTGCTGACCCTATAACAAGACCAAATGATTATATGGTTGCGGCAATTCACACTAGCATTCATGGATGTTTCGTTTTTATAAAAGCGGGCGAACCATGCTGGACTTATGTATGGAGCTTGAGCTGGAGTCATTCCTTTATGGATGTTATGTTCTATGGAGGTTTAGTTTATGTTGCTAGTAAATATCACGGTATAGTATCTTTTAATCTTGGTCATAAGAGGATAACTCCAAATCCAATTCAGGACATAGCTTTTCATGGAAGGTTTAAAGGTTATCTTGTGAAATCATTAGAGGGAGACTTGTGGATGGTGAAAAGATTTTTTACTTTTAAGATTGATTTCCAAGTGTACAAGTTGGAATTCAATGCTCAGACCGGAAATTTTAAACAAATGCTAAAGCTTGAGAGTCTTGGAGACAATGTTTTGTTCTTAGGAGACACTGATTCAATTTCTGTATCAGCTTCATACTTCTCCGGTTGTCTGAAAAAAGATTCAATTTATTACACAGAAAGTATTAATGCAAACAAGTTAGATTGTGTAACTTGTGGTCCATTTCATATAGGGATATATAATGTAAGAGATGGAACCATTGATCATCATAATCTTCACAATCATTTCTTCAACAAGCGGCAGCCACCACCTTTCTGGGTTTTACCAAATTTCCAATGA

Protein sequence

>MS.gene76061.t1

MELDWANLEALALDLILDKLEEQIDHICFGAVCKNWRLIAKLNHQDQRFRTHVLPMLMIPRTERCLYSISAKKMYPFKLPNSYYHICCGFSHGWLATIDKSHAITLLHPSKNVAPISLPTLDRSYTSLSEVGYKVTLSADPITRPNDYMVAAIHTSIHGCFVFIKAGEPCWTYVWSLSWSHSFMDVMFYGGLVYVASKYHGIVSFNLGHKRITPNPIQDIAFHGRFKGYLVKSLEGDLWMVKRFFTFKIDFQVYKLEFNAQTGNFKQMLKLESLGDNVLFLGDTDSISVSASYFSGCLKKDSIYYTESINANKLDCVTCGPFHIGIYNVRDGTIDHHNLHNHFFNKRQPPPFWVLPNFQ