Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27636.t1 | ABN08821.1 | 92.7 | 315 | 23 | 0 | 56 | 370 | 6 | 320 | 4.10E-165 | 590.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27636.t1 | A2Q5C1 | 92.7 | 315 | 23 | 0 | 56 | 370 | 6 | 320 | 3.0e-165 | 590.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27636.t1 | MTR_7g076110 | 94.888 | 313 | 16 | 0 | 58 | 370 | 1 | 313 | 0.0 | 586 |
| MS.gene27636.t1 | MTR_7g077620 | 56.464 | 379 | 145 | 8 | 1 | 368 | 1 | 370 | 7.82e-134 | 388 |
| MS.gene27636.t1 | MTR_7g077650 | 53.886 | 386 | 148 | 12 | 1 | 370 | 1 | 372 | 2.70e-122 | 358 |
| MS.gene27636.t1 | MTR_7g077660 | 53.457 | 376 | 154 | 9 | 5 | 370 | 4 | 368 | 6.49e-119 | 349 |
| MS.gene27636.t1 | MTR_7g076100 | 60.504 | 238 | 90 | 4 | 134 | 370 | 66 | 300 | 1.76e-91 | 276 |
| MS.gene27636.t1 | MTR_7g076100 | 83.333 | 54 | 9 | 0 | 1 | 54 | 1 | 54 | 1.91e-24 | 102 |
| MS.gene27636.t1 | MTR_5g038260 | 39.175 | 388 | 203 | 14 | 6 | 370 | 6 | 383 | 6.58e-74 | 234 |
| MS.gene27636.t1 | MTR_1g108740 | 42.627 | 373 | 177 | 14 | 3 | 368 | 2 | 344 | 2.26e-73 | 232 |
| MS.gene27636.t1 | MTR_5g082770 | 44.737 | 304 | 142 | 9 | 6 | 302 | 4 | 288 | 6.59e-73 | 229 |
| MS.gene27636.t1 | MTR_5g038230 | 36.693 | 387 | 184 | 13 | 6 | 368 | 4 | 353 | 1.26e-66 | 214 |
| MS.gene27636.t1 | MTR_1g064570 | 38.592 | 412 | 193 | 16 | 5 | 370 | 3 | 400 | 1.04e-65 | 214 |
| MS.gene27636.t1 | MTR_1g016150 | 45.550 | 191 | 74 | 7 | 3 | 175 | 2 | 180 | 9.47e-42 | 146 |
| MS.gene27636.t1 | MTR_7g076130 | 56.349 | 126 | 53 | 2 | 163 | 287 | 24 | 148 | 6.86e-39 | 136 |
| MS.gene27636.t1 | MTR_5g082780 | 38.667 | 225 | 108 | 8 | 109 | 325 | 6 | 208 | 6.70e-33 | 123 |
| MS.gene27636.t1 | MTR_1g108750 | 44.000 | 150 | 53 | 4 | 6 | 154 | 4 | 123 | 1.91e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 83 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCAAACCAACCATTT+TGG | 0.209572 | 7.2:-29686762 | MS.gene27636:CDS |
| GACAGTGTTCCAGAAGATTT+AGG | 0.219883 | 7.2:-29686280 | MS.gene27636:CDS |
| TTCTCATAGTAGGTAAAATT+AGG | 0.225887 | 7.2:+29686604 | None:intergenic |
| ACCATCAAAACCATCAATTT+AGG | 0.249142 | 7.2:-29687128 | MS.gene27636:CDS |
| ACCTGTCATGGCTCTTCATT+TGG | 0.288626 | 7.2:-29686988 | MS.gene27636:CDS |
| ATCCCAAACCCTAAATCTTC+TGG | 0.300792 | 7.2:+29686271 | None:intergenic |
| GGAATAATACCATACTTAAA+AGG | 0.315387 | 7.2:+29686919 | None:intergenic |
| CGACGTTTACAAATTGAAAC+TGG | 0.332871 | 7.2:-29686449 | MS.gene27636:CDS |
| GTTCCAGAAGATTTAGGGTT+TGG | 0.341176 | 7.2:-29686274 | MS.gene27636:CDS |
| AATGAACAGACTTAAGAGTT+TGG | 0.348149 | 7.2:-29686401 | MS.gene27636:CDS |
| AGAAGAACTTCCTCTTAGTT+TGG | 0.350191 | 7.2:-29687232 | MS.gene27636:CDS |
| TTCCAGAAGATTTAGGGTTT+GGG | 0.356926 | 7.2:-29686273 | MS.gene27636:CDS |
| AGTACTCTTTGTGGCTTAGA+AGG | 0.357548 | 7.2:+29687040 | None:intergenic |
| GTCATGGCTCTTCATTTGGT+TGG | 0.362670 | 7.2:-29686984 | MS.gene27636:CDS |
| GTAACTATAGGAATCCAAAA+TGG | 0.366794 | 7.2:+29686748 | None:intergenic |
| TGTAATAAATTTGTAACTAT+AGG | 0.375568 | 7.2:+29686736 | None:intergenic |
| ACAGTGTTCCAGAAGATTTA+GGG | 0.377757 | 7.2:-29686279 | MS.gene27636:CDS |
| ACACTCCGGAGATATCTTAA+AGG | 0.378694 | 7.2:+29686865 | None:intergenic |
| AAGTTTGTCCAGCATAATCT+TGG | 0.388756 | 7.2:+29686551 | None:intergenic |
| AAAAGGATTGAGTAGAGTTA+TGG | 0.390478 | 7.2:+29686936 | None:intergenic |
| GGGCTCTACCTCAATTTCAA+TGG | 0.397463 | 7.2:-29686177 | MS.gene27636:CDS |
| CACATAGATCATCTTAGATT+CGG | 0.408172 | 7.2:-29687189 | MS.gene27636:CDS |
| ATGAACAGACTTAAGAGTTT+GGG | 0.410853 | 7.2:-29686400 | MS.gene27636:CDS |
| GGCTCTACCTCAATTTCAAT+GGG | 0.416041 | 7.2:-29686176 | MS.gene27636:CDS |
| TCTCATAGTAGGTAAAATTA+GGG | 0.423599 | 7.2:+29686605 | None:intergenic |
| GCTAGTTATCTTCTCATAGT+AGG | 0.423741 | 7.2:+29686594 | None:intergenic |
| TACTGCTCTTGGATTCGATT+GGG | 0.430675 | 7.2:+29687076 | None:intergenic |
| ATTGAATGGAGTACTCTTTG+TGG | 0.430687 | 7.2:+29687031 | None:intergenic |
| ACGACAGCAACATAATCATC+TGG | 0.430984 | 7.2:+29686814 | None:intergenic |
| TTCGAGAGGTGGCAGACTAA+TGG | 0.431252 | 7.2:+29686894 | None:intergenic |
| TTAGGGTCATTTGAGCGATC+AGG | 0.435005 | 7.2:+29686622 | None:intergenic |
| TCGAGAGGTGGCAGACTAAT+GGG | 0.436341 | 7.2:+29686895 | None:intergenic |
| GACATCGAAAAGCTTTCATA+TGG | 0.441021 | 7.2:-29686475 | MS.gene27636:CDS |
| GTATAGTATTCCTAAATTGA+TGG | 0.447518 | 7.2:+29687118 | None:intergenic |
| CGATGAGGAAGGTGGTAGAC+TGG | 0.455468 | 7.2:-29687263 | MS.gene27636:CDS |
| TATCTTGTGAAATCATTGAA+TGG | 0.459383 | 7.2:-29686529 | MS.gene27636:CDS |
| GATTGGGACGCTCATGATCA+TGG | 0.463327 | 7.2:+29687092 | None:intergenic |
| AATCAATCCCATTGAAATTG+AGG | 0.474667 | 7.2:+29686169 | None:intergenic |
| GCTGTCGTCATTTACAACTT+TGG | 0.475418 | 7.2:-29686799 | MS.gene27636:CDS |
| TAATCATCTGGGCTTATGAT+GGG | 0.479866 | 7.2:+29686826 | None:intergenic |
| ATACAAGGATCTACTGCTCT+TGG | 0.483271 | 7.2:+29687065 | None:intergenic |
| ATAATCATCTGGGCTTATGA+TGG | 0.483695 | 7.2:+29686825 | None:intergenic |
| CTACTGCTCTTGGATTCGAT+TGG | 0.489995 | 7.2:+29687075 | None:intergenic |
| TAGGGTCATTTGAGCGATCA+GGG | 0.500420 | 7.2:+29686623 | None:intergenic |
| AATCATTGAATGGAGACATA+TGG | 0.507395 | 7.2:-29686519 | MS.gene27636:CDS |
| AGTTTGTCCAGCATAATCTT+GGG | 0.508944 | 7.2:+29686552 | None:intergenic |
| TTGTCAAGAACCAAACTAAG+AGG | 0.509205 | 7.2:+29687222 | None:intergenic |
| TCGGTTTCGTGTGCAAGACT+TGG | 0.511651 | 7.2:-29687170 | MS.gene27636:CDS |
| AGGAGGAGTGTTGAACTTGA+AGG | 0.513586 | 7.2:+29686648 | None:intergenic |
| ACAAGAGGCAGACACAGAAA+AGG | 0.516829 | 7.2:+29686342 | None:intergenic |
| TGTGATGGATGAAAATTGAA+TGG | 0.520449 | 7.2:+29687017 | None:intergenic |
| CTATAGGAATCCAAAATGGT+TGG | 0.542954 | 7.2:+29686752 | None:intergenic |
| CACCACCTTTAAGATATCTC+CGG | 0.544228 | 7.2:-29686870 | MS.gene27636:CDS |
| GGGATCTATAATGTGAAGGA+TGG | 0.545871 | 7.2:-29686253 | MS.gene27636:CDS |
| ATTGGGACGCTCATGATCAT+GGG | 0.549814 | 7.2:+29687093 | None:intergenic |
| ACCAAATGAAGAGCCATGAC+AGG | 0.552193 | 7.2:+29686987 | None:intergenic |
| GCTAGAGCCCAAGATTATGC+TGG | 0.553236 | 7.2:-29686559 | MS.gene27636:CDS |
| TGCGTCTGCTCGAAGGAAAG+TGG | 0.572553 | 7.2:+29686208 | None:intergenic |
| GTGGCTTAGAAGGCTATACA+AGG | 0.574812 | 7.2:+29687050 | None:intergenic |
| ATCACATTTATAACCTGTCA+TGG | 0.576549 | 7.2:-29687000 | MS.gene27636:CDS |
| ATCTGGGCTTATGATGGGGT+CGG | 0.585200 | 7.2:+29686831 | None:intergenic |
| GATGAGGAAGGTGGTAGACT+GGG | 0.589322 | 7.2:-29687262 | MS.gene27636:CDS |
| CTTTCATTAGTCCACAGTAA+CGG | 0.591490 | 7.2:-29686961 | MS.gene27636:CDS |
| CGACAGCAACATAATCATCT+GGG | 0.592571 | 7.2:+29686815 | None:intergenic |
| TTTGAACTTGGAGAAACAAG+AGG | 0.593858 | 7.2:+29686327 | None:intergenic |
| ATGACAGGTTATAAATGTGA+TGG | 0.594341 | 7.2:+29687002 | None:intergenic |
| GGGTCATTTGAGCGATCAGG+GGG | 0.608939 | 7.2:+29686625 | None:intergenic |
| AAGTTTCTTAACGATGAGGA+AGG | 0.609754 | 7.2:-29687274 | None:intergenic |
| AAAGGTGGTGATTCGAGAGG+TGG | 0.610801 | 7.2:+29686883 | None:intergenic |
| GTTTGGGATCTATAATGTGA+AGG | 0.626362 | 7.2:-29686257 | MS.gene27636:CDS |
| TTTCTTAACGATGAGGAAGG+TGG | 0.631528 | 7.2:-29687271 | None:intergenic |
| AATCATCTGGGCTTATGATG+GGG | 0.632274 | 7.2:+29686827 | None:intergenic |
| AGGGTCATTTGAGCGATCAG+GGG | 0.648257 | 7.2:+29686624 | None:intergenic |
| CTCCGGAGATATCTTAAAGG+TGG | 0.652726 | 7.2:+29686868 | None:intergenic |
| CGGCAGACAATGTAACACTC+CGG | 0.665324 | 7.2:+29686851 | None:intergenic |
| GAGTTATGGAACCGTTACTG+TGG | 0.666466 | 7.2:+29686950 | None:intergenic |
| GGGACGCTCATGATCATGGG+TGG | 0.671811 | 7.2:+29687096 | None:intergenic |
| CTTAAAGGTGGTGATTCGAG+AGG | 0.674686 | 7.2:+29686880 | None:intergenic |
| ATTGAATGGAGACATATGGA+TGG | 0.693585 | 7.2:-29686515 | MS.gene27636:CDS |
| TTGAAACTGGACACCCAGAG+TGG | 0.696035 | 7.2:-29686436 | MS.gene27636:CDS |
| GGATTGAATAGTGTCTGAGT+GGG | 0.704793 | 7.2:+29686669 | None:intergenic |
| AGGATTGAATAGTGTCTGAG+TGG | 0.717909 | 7.2:+29686668 | None:intergenic |
| AGAGGTGGCAGACTAATGGG+AGG | 0.718242 | 7.2:+29686898 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAATAAATTTGTAACTAT+AGG | + | chr7.2:29686699-29686718 | None:intergenic | 15.0% |
| !!! | AATGATGTTGTATTTTATAA+AGG | - | chr7.2:29686723-29686742 | MS.gene27636:CDS | 15.0% |
| !!! | ATTTTATTTATCGGATATTG+TGG | - | chr7.2:29687062-29687081 | MS.gene27636:CDS | 20.0% |
| ! | GGAATAATACCATACTTAAA+AGG | + | chr7.2:29686516-29686535 | None:intergenic | 25.0% |
| ! | GTATAGTATTCCTAAATTGA+TGG | + | chr7.2:29686317-29686336 | None:intergenic | 25.0% |
| ! | TATCTTGTGAAATCATTGAA+TGG | - | chr7.2:29686903-29686922 | MS.gene27636:CDS | 25.0% |
| ! | TCTCATAGTAGGTAAAATTA+GGG | + | chr7.2:29686830-29686849 | None:intergenic | 25.0% |
| ! | TTCTCATAGTAGGTAAAATT+AGG | + | chr7.2:29686831-29686850 | None:intergenic | 25.0% |
| !!! | AACTGAATCTTTTTTGAACT+TGG | + | chr7.2:29687120-29687139 | None:intergenic | 25.0% |
| !!! | GGAGACAACATTTTATTTAT+CGG | - | chr7.2:29687053-29687072 | MS.gene27636:CDS | 25.0% |
| AAAAGGATTGAGTAGAGTTA+TGG | + | chr7.2:29686499-29686518 | None:intergenic | 30.0% | |
| AATCATTGAATGGAGACATA+TGG | - | chr7.2:29686913-29686932 | MS.gene27636:CDS | 30.0% | |
| AATGAACAGACTTAAGAGTT+TGG | - | chr7.2:29687031-29687050 | MS.gene27636:CDS | 30.0% | |
| ACCATCAAAACCATCAATTT+AGG | - | chr7.2:29686304-29686323 | MS.gene27636:CDS | 30.0% | |
| ATCACATTTATAACCTGTCA+TGG | - | chr7.2:29686432-29686451 | MS.gene27636:CDS | 30.0% | |
| ATGAACAGACTTAAGAGTTT+GGG | - | chr7.2:29687032-29687051 | MS.gene27636:CDS | 30.0% | |
| ATGACAGGTTATAAATGTGA+TGG | + | chr7.2:29686433-29686452 | None:intergenic | 30.0% | |
| CACATAGATCATCTTAGATT+CGG | - | chr7.2:29686243-29686262 | MS.gene27636:CDS | 30.0% | |
| GTAACTATAGGAATCCAAAA+TGG | + | chr7.2:29686687-29686706 | None:intergenic | 30.0% | |
| ! | TTGCTCTTTTGAATGCAATA+CGG | + | chr7.2:29686659-29686678 | None:intergenic | 30.0% |
| !! | CTACTCAATCCTTTTAAGTA+TGG | - | chr7.2:29686504-29686523 | MS.gene27636:CDS | 30.0% |
| !! | TGTGATGGATGAAAATTGAA+TGG | + | chr7.2:29686418-29686437 | None:intergenic | 30.0% |
| !!! | TCCTAAATTGATGGTTTTGA+TGG | + | chr7.2:29686308-29686327 | None:intergenic | 30.0% |
| AAGTTTGTCCAGCATAATCT+TGG | + | chr7.2:29686884-29686903 | None:intergenic | 35.0% | |
| ACAGTGTTCCAGAAGATTTA+GGG | - | chr7.2:29687153-29687172 | MS.gene27636:CDS | 35.0% | |
| AGAAGAACTTCCTCTTAGTT+TGG | - | chr7.2:29686200-29686219 | MS.gene27636:CDS | 35.0% | |
| AGTTTGTCCAGCATAATCTT+GGG | + | chr7.2:29686883-29686902 | None:intergenic | 35.0% | |
| ATAATCATCTGGGCTTATGA+TGG | + | chr7.2:29686610-29686629 | None:intergenic | 35.0% | |
| ATTGAATGGAGACATATGGA+TGG | - | chr7.2:29686917-29686936 | MS.gene27636:CDS | 35.0% | |
| CGACGTTTACAAATTGAAAC+TGG | - | chr7.2:29686983-29687002 | MS.gene27636:CDS | 35.0% | |
| CTATAGGAATCCAAAATGGT+TGG | + | chr7.2:29686683-29686702 | None:intergenic | 35.0% | |
| CTTTCATTAGTCCACAGTAA+CGG | - | chr7.2:29686471-29686490 | MS.gene27636:CDS | 35.0% | |
| GACATCGAAAAGCTTTCATA+TGG | - | chr7.2:29686957-29686976 | MS.gene27636:CDS | 35.0% | |
| GCTAGTTATCTTCTCATAGT+AGG | + | chr7.2:29686841-29686860 | None:intergenic | 35.0% | |
| TAATCATCTGGGCTTATGAT+GGG | + | chr7.2:29686609-29686628 | None:intergenic | 35.0% | |
| TTGTCAAGAACCAAACTAAG+AGG | + | chr7.2:29686213-29686232 | None:intergenic | 35.0% | |
| TTTGAACTTGGAGAAACAAG+AGG | + | chr7.2:29687108-29687127 | None:intergenic | 35.0% | |
| ! | AAAGAGCAAACCAACCATTT+TGG | - | chr7.2:29686670-29686689 | MS.gene27636:CDS | 35.0% |
| ! | ATTGAATGGAGTACTCTTTG+TGG | + | chr7.2:29686404-29686423 | None:intergenic | 35.0% |
| ! | GTTTGGGATCTATAATGTGA+AGG | - | chr7.2:29687175-29687194 | MS.gene27636:CDS | 35.0% |
| ! | TTCCAGAAGATTTAGGGTTT+GGG | - | chr7.2:29687159-29687178 | MS.gene27636:CDS | 35.0% |
| ! | TTGTACAAGTTTTCCACTCT+GGG | + | chr7.2:29687012-29687031 | None:intergenic | 35.0% |
| ! | TTTGTACAAGTTTTCCACTC+TGG | + | chr7.2:29687013-29687032 | None:intergenic | 35.0% |
| AAAAAATTGCGTCTGCTCGA+AGG | + | chr7.2:29687234-29687253 | None:intergenic | 40.0% | |
| AATCATCTGGGCTTATGATG+GGG | + | chr7.2:29686608-29686627 | None:intergenic | 40.0% | |
| ACACTCCGGAGATATCTTAA+AGG | + | chr7.2:29686570-29686589 | None:intergenic | 40.0% | |
| ACGACAGCAACATAATCATC+TGG | + | chr7.2:29686621-29686640 | None:intergenic | 40.0% | |
| AGGATTGAATAGTGTCTGAG+TGG | + | chr7.2:29686767-29686786 | None:intergenic | 40.0% | |
| AGTACTCTTTGTGGCTTAGA+AGG | + | chr7.2:29686395-29686414 | None:intergenic | 40.0% | |
| ATACAAGGATCTACTGCTCT+TGG | + | chr7.2:29686370-29686389 | None:intergenic | 40.0% | |
| ATCCCAAACCCTAAATCTTC+TGG | + | chr7.2:29687164-29687183 | None:intergenic | 40.0% | |
| CGACAGCAACATAATCATCT+GGG | + | chr7.2:29686620-29686639 | None:intergenic | 40.0% | |
| GACAGTGTTCCAGAAGATTT+AGG | - | chr7.2:29687152-29687171 | MS.gene27636:CDS | 40.0% | |
| GCTGTCGTCATTTACAACTT+TGG | - | chr7.2:29686633-29686652 | MS.gene27636:CDS | 40.0% | |
| GGATTGAATAGTGTCTGAGT+GGG | + | chr7.2:29686766-29686785 | None:intergenic | 40.0% | |
| GGCTCTACCTCAATTTCAAT+GGG | - | chr7.2:29687256-29687275 | MS.gene27636:CDS | 40.0% | |
| GGGATCTATAATGTGAAGGA+TGG | - | chr7.2:29687179-29687198 | MS.gene27636:CDS | 40.0% | |
| TACTGCTCTTGGATTCGATT+GGG | + | chr7.2:29686359-29686378 | None:intergenic | 40.0% | |
| ! | GTTCCAGAAGATTTAGGGTT+TGG | - | chr7.2:29687158-29687177 | MS.gene27636:CDS | 40.0% |
| !! | CACCACCTTTAAGATATCTC+CGG | - | chr7.2:29686562-29686581 | MS.gene27636:CDS | 40.0% |
| !!! | CGAGCAGACGCAATTTTTTT+GGG | - | chr7.2:29687235-29687254 | MS.gene27636:CDS | 40.0% |
| !!! | TCGAGCAGACGCAATTTTTT+TGG | - | chr7.2:29687234-29687253 | MS.gene27636:CDS | 40.0% |
| ACAAGAGGCAGACACAGAAA+AGG | + | chr7.2:29687093-29687112 | None:intergenic | 45.0% | |
| ACCAAATGAAGAGCCATGAC+AGG | + | chr7.2:29686448-29686467 | None:intergenic | 45.0% | |
| ACCTGTCATGGCTCTTCATT+TGG | - | chr7.2:29686444-29686463 | MS.gene27636:CDS | 45.0% | |
| ATTGGGACGCTCATGATCAT+GGG | + | chr7.2:29686342-29686361 | None:intergenic | 45.0% | |
| CTACTGCTCTTGGATTCGAT+TGG | + | chr7.2:29686360-29686379 | None:intergenic | 45.0% | |
| CTCCGGAGATATCTTAAAGG+TGG | + | chr7.2:29686567-29686586 | None:intergenic | 45.0% | |
| CTTAAAGGTGGTGATTCGAG+AGG | + | chr7.2:29686555-29686574 | None:intergenic | 45.0% | |
| GAGTTATGGAACCGTTACTG+TGG | + | chr7.2:29686485-29686504 | None:intergenic | 45.0% | |
| GGGCTCTACCTCAATTTCAA+TGG | - | chr7.2:29687255-29687274 | MS.gene27636:CDS | 45.0% | |
| GTCATGGCTCTTCATTTGGT+TGG | - | chr7.2:29686448-29686467 | MS.gene27636:CDS | 45.0% | |
| GTGGCTTAGAAGGCTATACA+AGG | + | chr7.2:29686385-29686404 | None:intergenic | 45.0% | |
| TAGGGTCATTTGAGCGATCA+GGG | + | chr7.2:29686812-29686831 | None:intergenic | 45.0% | |
| TTAGGGTCATTTGAGCGATC+AGG | + | chr7.2:29686813-29686832 | None:intergenic | 45.0% | |
| !! | AGGAGGAGTGTTGAACTTGA+AGG | + | chr7.2:29686787-29686806 | None:intergenic | 45.0% |
| AAAGGTGGTGATTCGAGAGG+TGG | + | chr7.2:29686552-29686571 | None:intergenic | 50.0% | |
| AGGGTCATTTGAGCGATCAG+GGG | + | chr7.2:29686811-29686830 | None:intergenic | 50.0% | |
| CGGCAGACAATGTAACACTC+CGG | + | chr7.2:29686584-29686603 | None:intergenic | 50.0% | |
| GATTGGGACGCTCATGATCA+TGG | + | chr7.2:29686343-29686362 | None:intergenic | 50.0% | |
| GCTAGAGCCCAAGATTATGC+TGG | - | chr7.2:29686873-29686892 | MS.gene27636:CDS | 50.0% | |
| TCGAGAGGTGGCAGACTAAT+GGG | + | chr7.2:29686540-29686559 | None:intergenic | 50.0% | |
| TCGGTTTCGTGTGCAAGACT+TGG | - | chr7.2:29686262-29686281 | MS.gene27636:CDS | 50.0% | |
| TTCGAGAGGTGGCAGACTAA+TGG | + | chr7.2:29686541-29686560 | None:intergenic | 50.0% | |
| TTGAAACTGGACACCCAGAG+TGG | - | chr7.2:29686996-29687015 | MS.gene27636:CDS | 50.0% | |
| ! | ATCTGGGCTTATGATGGGGT+CGG | + | chr7.2:29686604-29686623 | None:intergenic | 50.0% |
| AGAGGTGGCAGACTAATGGG+AGG | + | chr7.2:29686537-29686556 | None:intergenic | 55.0% | |
| GGGTCATTTGAGCGATCAGG+GGG | + | chr7.2:29686810-29686829 | None:intergenic | 55.0% | |
| TCATTTGAGCGATCAGGGGG+AGG | + | chr7.2:29686807-29686826 | None:intergenic | 55.0% | |
| TGCGTCTGCTCGAAGGAAAG+TGG | + | chr7.2:29687227-29687246 | None:intergenic | 55.0% | |
| GGGACGCTCATGATCATGGG+TGG | + | chr7.2:29686339-29686358 | None:intergenic | 60.0% | |
| TTTGAGCGATCAGGGGGAGG+AGG | + | chr7.2:29686804-29686823 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 29686171 | 29687283 | 29686171 | ID=MS.gene27636 |
| chr7.2 | mRNA | 29686171 | 29687283 | 29686171 | ID=MS.gene27636.t1;Parent=MS.gene27636 |
| chr7.2 | exon | 29686171 | 29687283 | 29686171 | ID=MS.gene27636.t1.exon1;Parent=MS.gene27636.t1 |
| chr7.2 | CDS | 29686171 | 29687283 | 29686171 | ID=cds.MS.gene27636.t1;Parent=MS.gene27636.t1 |
| Gene Sequence |
| Protein sequence |