Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49594.t1 | XP_003613576.1 | 92.4 | 381 | 28 | 1 | 1 | 380 | 3 | 383 | 2.40E-216 | 761.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49594.t1 | G7K9R3 | 92.4 | 381 | 28 | 1 | 1 | 380 | 3 | 383 | 1.7e-216 | 761.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49594.t1 | MTR_5g038260 | 92.388 | 381 | 28 | 1 | 1 | 380 | 3 | 383 | 0.0 | 738 |
MS.gene49594.t1 | MTR_5g038230 | 84.474 | 380 | 34 | 2 | 1 | 380 | 1 | 355 | 0.0 | 658 |
MS.gene49594.t1 | MTR_1g064570 | 49.876 | 403 | 176 | 9 | 1 | 380 | 1 | 400 | 6.05e-131 | 381 |
MS.gene49594.t1 | MTR_1g108740 | 44.909 | 383 | 164 | 10 | 2 | 378 | 3 | 344 | 2.86e-98 | 296 |
MS.gene49594.t1 | MTR_5g082770 | 50.654 | 306 | 131 | 10 | 1 | 303 | 1 | 289 | 1.29e-86 | 264 |
MS.gene49594.t1 | MTR_7g077620 | 42.239 | 393 | 182 | 15 | 4 | 378 | 5 | 370 | 4.64e-78 | 246 |
MS.gene49594.t1 | MTR_7g077660 | 41.058 | 397 | 181 | 17 | 4 | 380 | 5 | 368 | 1.48e-73 | 233 |
MS.gene49594.t1 | MTR_7g077650 | 40.247 | 405 | 177 | 18 | 4 | 380 | 5 | 372 | 1.32e-72 | 231 |
MS.gene49594.t1 | MTR_5g082780 | 44.269 | 253 | 118 | 8 | 103 | 351 | 1 | 234 | 3.05e-54 | 179 |
MS.gene49594.t1 | MTR_7g076110 | 36.825 | 315 | 166 | 12 | 77 | 380 | 21 | 313 | 3.51e-45 | 158 |
MS.gene49594.t1 | MTR_1g016150 | 44.974 | 189 | 79 | 7 | 2 | 177 | 3 | 179 | 5.60e-45 | 155 |
MS.gene49594.t1 | MTR_1g016150 | 55.072 | 69 | 24 | 1 | 248 | 316 | 175 | 236 | 7.14e-14 | 70.9 |
MS.gene49594.t1 | MTR_7g076100 | 41.732 | 254 | 114 | 11 | 139 | 380 | 69 | 300 | 4.22e-39 | 141 |
MS.gene49594.t1 | MTR_7g076100 | 60.000 | 50 | 19 | 1 | 4 | 53 | 6 | 54 | 3.50e-11 | 63.9 |
MS.gene49594.t1 | MTR_1g108750 | 43.750 | 160 | 51 | 5 | 1 | 157 | 1 | 124 | 6.44e-26 | 101 |
MS.gene49594.t1 | MTR_6g023955 | 48.673 | 113 | 50 | 2 | 112 | 217 | 40 | 151 | 1.05e-24 | 100 |
MS.gene49594.t1 | MTR_6g023955 | 57.377 | 61 | 26 | 0 | 319 | 379 | 149 | 209 | 5.84e-18 | 82.0 |
MS.gene49594.t1 | MTR_3g114990 | 26.139 | 417 | 237 | 17 | 1 | 375 | 20 | 407 | 8.74e-20 | 90.5 |
MS.gene49594.t1 | MTR_3g114970 | 25.000 | 392 | 237 | 16 | 1 | 375 | 1 | 352 | 1.18e-17 | 84.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 73 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATTATATTGCTCCTAAAT+TGG | 0.217987 | 5.1:-28844120 | None:intergenic |
TAATCATTTGGACTTGTTAT+AGG | 0.239358 | 5.1:-28844418 | None:intergenic |
AATAGTAAATTGAATCCTTT+TGG | 0.242301 | 5.1:-28844930 | None:intergenic |
TGGTGAGAAGGTTTATAAAT+AGG | 0.247820 | 5.1:+28844734 | MS.gene49594:CDS |
ATACAAGACACTGACCATTT+TGG | 0.281472 | 5.1:+28844514 | MS.gene49594:CDS |
TAAAAGCAGGACAAGAGTTT+TGG | 0.281524 | 5.1:+28844485 | MS.gene49594:CDS |
CTTCTTTGTAACAAAACATT+TGG | 0.292647 | 5.1:-28844649 | None:intergenic |
TTAAGCATTGTCAATTCTAA+TGG | 0.313392 | 5.1:-28844217 | None:intergenic |
TTGTTATTCAAGTGACCCTT+GGG | 0.317511 | 5.1:+28844612 | MS.gene49594:CDS |
ATAGCAGCAACATCCTTAAA+AGG | 0.324907 | 5.1:-28844316 | None:intergenic |
TTGTCGAAACTTGAGAGTTT+AGG | 0.326449 | 5.1:+28844838 | MS.gene49594:CDS |
GCCACCCATCGATAATTATA+TGG | 0.327281 | 5.1:+28844345 | MS.gene49594:CDS |
ATCAACACGATCACCAATTT+AGG | 0.336169 | 5.1:+28844107 | MS.gene49594:CDS |
TTGAACCAATTGATCACATT+TGG | 0.344806 | 5.1:+28844038 | MS.gene49594:CDS |
CCAATTGATCACATTTGGTT+TGG | 0.352054 | 5.1:+28844043 | MS.gene49594:CDS |
TTCTTTACATGTATTTAAGT+TGG | 0.365055 | 5.1:+28844783 | MS.gene49594:CDS |
GCATAACCATGGAGCGAGAT+TGG | 0.373158 | 5.1:+28843969 | None:intergenic |
CCAAACCAAATGTGATCAAT+TGG | 0.396537 | 5.1:-28844043 | None:intergenic |
GGTGAGAAGGTTTATAAATA+GGG | 0.399787 | 5.1:+28844735 | MS.gene49594:CDS |
TACTTATTTAGTGAAATCAT+TGG | 0.416138 | 5.1:+28844696 | MS.gene49594:CDS |
CATTACATTCTACAATGGTT+TGG | 0.419262 | 5.1:+28844546 | MS.gene49594:CDS |
GCTGCAACCACATAATCATT+TGG | 0.420868 | 5.1:-28844430 | None:intergenic |
TAATGTCGATGAAACCAAAA+TGG | 0.420892 | 5.1:-28844528 | None:intergenic |
CGATAATTATATGGTATGTA+AGG | 0.424343 | 5.1:+28844354 | MS.gene49594:CDS |
AAAAGGTGGCACAACCCATA+TGG | 0.432547 | 5.1:-28845085 | None:intergenic |
AAGGTATGACACCTCCCATA+TGG | 0.446486 | 5.1:+28845070 | MS.gene49594:CDS |
CATAACCATGGAGCGAGATT+GGG | 0.451858 | 5.1:+28843970 | None:intergenic |
TCAAAAGGACCTCTAGGATA+AGG | 0.452966 | 5.1:-28844982 | None:intergenic |
CCTAATCAATTCCATTGAAA+AGG | 0.460995 | 5.1:-28845102 | None:intergenic |
GAGAGTTGTGGATGGTGAGA+AGG | 0.464771 | 5.1:+28844722 | MS.gene49594:CDS |
CGTTACAAATCTTACTTCAA+AGG | 0.467196 | 5.1:+28845051 | MS.gene49594:CDS |
TTTGTTATTCAAGTGACCCT+TGG | 0.473541 | 5.1:+28844611 | MS.gene49594:CDS |
TTTCTCAAGTTACCTCCAAA+AGG | 0.480419 | 5.1:+28844915 | MS.gene49594:CDS |
TGTGCATAAGGTTACATTGT+CGG | 0.510731 | 5.1:+28844390 | MS.gene49594:CDS |
TTCAAGTGACCCTTGGGGTG+AGG | 0.511989 | 5.1:+28844618 | MS.gene49594:CDS |
AACAAGTCCAAATGATTATG+TGG | 0.518480 | 5.1:+28844423 | MS.gene49594:CDS |
AGGTATGACACCTCCCATAT+GGG | 0.519021 | 5.1:+28845071 | MS.gene49594:CDS |
ACTTGAGCCACAACATCTCT+TGG | 0.521360 | 5.1:-28844242 | None:intergenic |
TTGTAGATTCCCATATCAAA+AGG | 0.521611 | 5.1:-28844997 | None:intergenic |
GTTGTGGCTCAAGTCATGGC+TGG | 0.535182 | 5.1:+28844251 | MS.gene49594:CDS |
GATTTCACTAAATAAGTAAG+TGG | 0.538843 | 5.1:-28844691 | None:intergenic |
AAAGGTGGCACAACCCATAT+GGG | 0.541900 | 5.1:-28845084 | None:intergenic |
TGTCTAGCTTTCATAAAAGC+AGG | 0.542520 | 5.1:+28844472 | MS.gene49594:CDS |
TTACGACTACAATGTGCATA+AGG | 0.543562 | 5.1:+28844378 | MS.gene49594:CDS |
CTTTGAAGTAAGATTTGTAA+CGG | 0.546410 | 5.1:-28845050 | None:intergenic |
TATTTAGTGAAATCATTGGA+GGG | 0.549492 | 5.1:+28844700 | MS.gene49594:CDS |
ACATACCATATAATTATCGA+TGG | 0.552414 | 5.1:-28844350 | None:intergenic |
GGACCTCTAGGATAAGGAAT+CGG | 0.552728 | 5.1:-28844976 | None:intergenic |
AAGTTGGAATTGAATGACAA+AGG | 0.553747 | 5.1:+28844799 | MS.gene49594:CDS |
GTTTGCCCAATCTCGCTCCA+TGG | 0.556567 | 5.1:-28843975 | None:intergenic |
CCCATATCAAAAGGACCTCT+AGG | 0.561580 | 5.1:-28844988 | None:intergenic |
TTATTTAGTGAAATCATTGG+AGG | 0.564804 | 5.1:+28844699 | MS.gene49594:CDS |
GGAATTCTTTCCTCACCCCA+AGG | 0.565481 | 5.1:-28844628 | None:intergenic |
ACGAAGAAGATGTCATCACT+TGG | 0.566470 | 5.1:+28844287 | MS.gene49594:CDS |
GGAATCTACAACGTAAAGCA+TGG | 0.570743 | 5.1:+28845009 | MS.gene49594:CDS |
AATCAATTCCATTGAAAAGG+TGG | 0.576430 | 5.1:-28845099 | None:intergenic |
TCTGAAGGGATCATTAGCAT+AGG | 0.577323 | 5.1:-28844142 | None:intergenic |
ATCGACATTACATTCTACAA+TGG | 0.582494 | 5.1:+28844541 | MS.gene49594:CDS |
GAATTCTTTCCTCACCCCAA+GGG | 0.583805 | 5.1:-28844627 | None:intergenic |
CTTAACACCAAGAGATGTTG+TGG | 0.590075 | 5.1:+28844235 | MS.gene49594:CDS |
GGTGATCGTGTTGATGACTA+AGG | 0.595842 | 5.1:-28844099 | None:intergenic |
AATCATTGGAGGGAGAGTTG+TGG | 0.606251 | 5.1:+28844710 | MS.gene49594:CDS |
TGGTGTATGCTGTAACTCGT+TGG | 0.616114 | 5.1:+28844566 | MS.gene49594:CDS |
CGAAGAAGATGTCATCACTT+GGG | 0.623448 | 5.1:+28844288 | MS.gene49594:CDS |
ACCATATAATTATCGATGGG+TGG | 0.627867 | 5.1:-28844346 | None:intergenic |
AGATGTTGTGGCTCAAGTCA+TGG | 0.635745 | 5.1:+28844247 | MS.gene49594:CDS |
TTATGAAAGCTAGACAGCCA+CGG | 0.638641 | 5.1:-28844465 | None:intergenic |
GAACCGATTCCTTATCCTAG+AGG | 0.645299 | 5.1:+28844973 | MS.gene49594:CDS |
CATACCATATAATTATCGAT+GGG | 0.648701 | 5.1:-28844349 | None:intergenic |
TGTTATTCAAGTGACCCTTG+GGG | 0.675329 | 5.1:+28844613 | MS.gene49594:CDS |
GCAGCAATTTACACTGACCG+TGG | 0.685734 | 5.1:+28844448 | MS.gene49594:CDS |
ATTGGAGGGAGAGTTGTGGA+TGG | 0.690403 | 5.1:+28844714 | MS.gene49594:CDS |
GGTGGCACAACCCATATGGG+AGG | 0.700789 | 5.1:-28845081 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACTTATTTAGTGAAATCAT+TGG | + | chr5.1:28844696-28844715 | MS.gene49594:CDS | 20.0% |
!! | TTCTTTACATGTATTTAAGT+TGG | + | chr5.1:28844783-28844802 | MS.gene49594:CDS | 20.0% |
!!! | AATAGTAAATTGAATCCTTT+TGG | - | chr5.1:28844933-28844952 | None:intergenic | 20.0% |
!!! | AATATTTTATTTGTAGGTGA+CGG | + | chr5.1:28844865-28844884 | MS.gene49594:CDS | 20.0% |
! | ACATACCATATAATTATCGA+TGG | - | chr5.1:28844353-28844372 | None:intergenic | 25.0% |
! | CATACCATATAATTATCGAT+GGG | - | chr5.1:28844352-28844371 | None:intergenic | 25.0% |
! | CGATAATTATATGGTATGTA+AGG | + | chr5.1:28844354-28844373 | MS.gene49594:CDS | 25.0% |
! | CTTCTTTGTAACAAAACATT+TGG | - | chr5.1:28844652-28844671 | None:intergenic | 25.0% |
! | GATTTCACTAAATAAGTAAG+TGG | - | chr5.1:28844694-28844713 | None:intergenic | 25.0% |
! | TATTTAGTGAAATCATTGGA+GGG | + | chr5.1:28844700-28844719 | MS.gene49594:CDS | 25.0% |
! | TTATTTAGTGAAATCATTGG+AGG | + | chr5.1:28844699-28844718 | MS.gene49594:CDS | 25.0% |
!! | TTAAGCATTGTCAATTCTAA+TGG | - | chr5.1:28844220-28844239 | None:intergenic | 25.0% |
!!! | CTTTGAAGTAAGATTTGTAA+CGG | - | chr5.1:28845053-28845072 | None:intergenic | 25.0% |
!!! | GGAGACAATATTTTATTTGT+AGG | + | chr5.1:28844859-28844878 | MS.gene49594:CDS | 25.0% |
!!! | TAATCATTTGGACTTGTTAT+AGG | - | chr5.1:28844421-28844440 | None:intergenic | 25.0% |
AACAAGTCCAAATGATTATG+TGG | + | chr5.1:28844423-28844442 | MS.gene49594:CDS | 30.0% | |
AAGTTGGAATTGAATGACAA+AGG | + | chr5.1:28844799-28844818 | MS.gene49594:CDS | 30.0% | |
AGGGTCAAAAATATCAACAA+AGG | + | chr5.1:28844754-28844773 | MS.gene49594:CDS | 30.0% | |
ATCGACATTACATTCTACAA+TGG | + | chr5.1:28844541-28844560 | MS.gene49594:CDS | 30.0% | |
CATTACATTCTACAATGGTT+TGG | + | chr5.1:28844546-28844565 | MS.gene49594:CDS | 30.0% | |
CGTTACAAATCTTACTTCAA+AGG | + | chr5.1:28845051-28845070 | MS.gene49594:CDS | 30.0% | |
GCATTATATTGCTCCTAAAT+TGG | - | chr5.1:28844123-28844142 | None:intergenic | 30.0% | |
GGTGAGAAGGTTTATAAATA+GGG | + | chr5.1:28844735-28844754 | MS.gene49594:CDS | 30.0% | |
TAATGTCGATGAAACCAAAA+TGG | - | chr5.1:28844531-28844550 | None:intergenic | 30.0% | |
TGGTGAGAAGGTTTATAAAT+AGG | + | chr5.1:28844734-28844753 | MS.gene49594:CDS | 30.0% | |
TTGAACCAATTGATCACATT+TGG | + | chr5.1:28844038-28844057 | MS.gene49594:CDS | 30.0% | |
TTGTAGATTCCCATATCAAA+AGG | - | chr5.1:28845000-28845019 | None:intergenic | 30.0% | |
! | AATGGATACACTCTATTTTC+AGG | - | chr5.1:28844202-28844221 | None:intergenic | 30.0% |
! | AGTAAATTGAATCCTTTTGG+AGG | - | chr5.1:28844930-28844949 | None:intergenic | 30.0% |
ACCATATAATTATCGATGGG+TGG | - | chr5.1:28844349-28844368 | None:intergenic | 35.0% | |
ATAGCAGCAACATCCTTAAA+AGG | - | chr5.1:28844319-28844338 | None:intergenic | 35.0% | |
ATCAACACGATCACCAATTT+AGG | + | chr5.1:28844107-28844126 | MS.gene49594:CDS | 35.0% | |
CCAAACCAAATGTGATCAAT+TGG | - | chr5.1:28844046-28844065 | None:intergenic | 35.0% | |
CCAATTGATCACATTTGGTT+TGG | + | chr5.1:28844043-28844062 | MS.gene49594:CDS | 35.0% | |
TGTGCATAAGGTTACATTGT+CGG | + | chr5.1:28844390-28844409 | MS.gene49594:CDS | 35.0% | |
TTACGACTACAATGTGCATA+AGG | + | chr5.1:28844378-28844397 | MS.gene49594:CDS | 35.0% | |
TTGTCGAAACTTGAGAGTTT+AGG | + | chr5.1:28844838-28844857 | MS.gene49594:CDS | 35.0% | |
TTTCTCAAGTTACCTCCAAA+AGG | + | chr5.1:28844915-28844934 | MS.gene49594:CDS | 35.0% | |
! | ATACAAGACACTGACCATTT+TGG | + | chr5.1:28844514-28844533 | MS.gene49594:CDS | 35.0% |
! | TAAAAGCAGGACAAGAGTTT+TGG | + | chr5.1:28844485-28844504 | MS.gene49594:CDS | 35.0% |
! | TTGTTATTCAAGTGACCCTT+GGG | + | chr5.1:28844612-28844631 | MS.gene49594:CDS | 35.0% |
! | TTTCTGGACTCTTTTCTGAA+GGG | - | chr5.1:28844159-28844178 | None:intergenic | 35.0% |
! | TTTTCTGGACTCTTTTCTGA+AGG | - | chr5.1:28844160-28844179 | None:intergenic | 35.0% |
!! | CTATACAAACATCGCTTTTC+TGG | - | chr5.1:28844175-28844194 | None:intergenic | 35.0% |
!! | TGTCTAGCTTTCATAAAAGC+AGG | + | chr5.1:28844472-28844491 | MS.gene49594:CDS | 35.0% |
!! | TTGGTTCTGTCTGCAAAAAT+TGG | + | chr5.1:28844062-28844081 | MS.gene49594:CDS | 35.0% |
!! | TTTGTTATTCAAGTGACCCT+TGG | + | chr5.1:28844611-28844630 | MS.gene49594:CDS | 35.0% |
ACGAAGAAGATGTCATCACT+TGG | + | chr5.1:28844287-28844306 | MS.gene49594:CDS | 40.0% | |
CGAAGAAGATGTCATCACTT+GGG | + | chr5.1:28844288-28844307 | MS.gene49594:CDS | 40.0% | |
CTTAACACCAAGAGATGTTG+TGG | + | chr5.1:28844235-28844254 | MS.gene49594:CDS | 40.0% | |
GCCACCCATCGATAATTATA+TGG | + | chr5.1:28844345-28844364 | MS.gene49594:CDS | 40.0% | |
GCTGCAACCACATAATCATT+TGG | - | chr5.1:28844433-28844452 | None:intergenic | 40.0% | |
GGAATCTACAACGTAAAGCA+TGG | + | chr5.1:28845009-28845028 | MS.gene49594:CDS | 40.0% | |
TCTGAAGGGATCATTAGCAT+AGG | - | chr5.1:28844145-28844164 | None:intergenic | 40.0% | |
TGTTATTCAAGTGACCCTTG+GGG | + | chr5.1:28844613-28844632 | MS.gene49594:CDS | 40.0% | |
TTATGAAAGCTAGACAGCCA+CGG | - | chr5.1:28844468-28844487 | None:intergenic | 40.0% | |
! | CACTTGGGAGAATCCTTTTA+AGG | + | chr5.1:28844303-28844322 | MS.gene49594:CDS | 40.0% |
! | CCTAGAGGTCCTTTTGATAT+GGG | + | chr5.1:28844988-28845007 | MS.gene49594:CDS | 40.0% |
! | TCCTAGAGGTCCTTTTGATA+TGG | + | chr5.1:28844987-28845006 | MS.gene49594:CDS | 40.0% |
!! | TCAAAAGGACCTCTAGGATA+AGG | - | chr5.1:28844985-28845004 | None:intergenic | 40.0% |
AAAAGGTGGCACAACCCATA+TGG | - | chr5.1:28845088-28845107 | None:intergenic | 45.0% | |
AAAGGTGGCACAACCCATAT+GGG | - | chr5.1:28845087-28845106 | None:intergenic | 45.0% | |
AAGGTATGACACCTCCCATA+TGG | + | chr5.1:28845070-28845089 | MS.gene49594:CDS | 45.0% | |
AATCATTGGAGGGAGAGTTG+TGG | + | chr5.1:28844710-28844729 | MS.gene49594:CDS | 45.0% | |
ACTTGAGCCACAACATCTCT+TGG | - | chr5.1:28844245-28844264 | None:intergenic | 45.0% | |
AGATGTTGTGGCTCAAGTCA+TGG | + | chr5.1:28844247-28844266 | MS.gene49594:CDS | 45.0% | |
AGGTATGACACCTCCCATAT+GGG | + | chr5.1:28845071-28845090 | MS.gene49594:CDS | 45.0% | |
CCCATATCAAAAGGACCTCT+AGG | - | chr5.1:28844991-28845010 | None:intergenic | 45.0% | |
GAATTCTTTCCTCACCCCAA+GGG | - | chr5.1:28844630-28844649 | None:intergenic | 45.0% | |
TGGTGTATGCTGTAACTCGT+TGG | + | chr5.1:28844566-28844585 | MS.gene49594:CDS | 45.0% | |
! | GAACCGATTCCTTATCCTAG+AGG | + | chr5.1:28844973-28844992 | MS.gene49594:CDS | 45.0% |
!! | GGACCTCTAGGATAAGGAAT+CGG | - | chr5.1:28844979-28844998 | None:intergenic | 45.0% |
!! | GGTGATCGTGTTGATGACTA+AGG | - | chr5.1:28844102-28844121 | None:intergenic | 45.0% |
ATTGGAGGGAGAGTTGTGGA+TGG | + | chr5.1:28844714-28844733 | MS.gene49594:CDS | 50.0% | |
GAGAGTTGTGGATGGTGAGA+AGG | + | chr5.1:28844722-28844741 | MS.gene49594:CDS | 50.0% | |
GCAGCAATTTACACTGACCG+TGG | + | chr5.1:28844448-28844467 | MS.gene49594:CDS | 50.0% | |
GGAATTCTTTCCTCACCCCA+AGG | - | chr5.1:28844631-28844650 | None:intergenic | 50.0% | |
! | GGGTTGTGCCACCTTTTCAA+TGG | + | chr5.1:28845091-28845110 | MS.gene49594:CDS | 50.0% |
GTTGTGGCTCAAGTCATGGC+TGG | + | chr5.1:28844251-28844270 | MS.gene49594:CDS | 55.0% | |
TTCAAGTGACCCTTGGGGTG+AGG | + | chr5.1:28844618-28844637 | MS.gene49594:CDS | 55.0% | |
GGTGGCACAACCCATATGGG+AGG | - | chr5.1:28845084-28845103 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 28843977 | 28845119 | 28843977 | ID=MS.gene49594 |
chr5.1 | mRNA | 28843977 | 28845119 | 28843977 | ID=MS.gene49594.t1;Parent=MS.gene49594 |
chr5.1 | exon | 28843977 | 28845119 | 28843977 | ID=MS.gene49594.t1.exon1;Parent=MS.gene49594.t1 |
chr5.1 | CDS | 28843977 | 28845119 | 28843977 | ID=cds.MS.gene49594.t1;Parent=MS.gene49594.t1 |
Gene Sequence |
Protein sequence |