AlfalfaGEDB | MS.gene031136

M. sativa cultivar XinJiangDaYe / MS.gene031136

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene031136.t1	XP_013468204.1	74.6	248	58	3	33	278	156	400	1.20E-105	392.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene031136.t1	Q9FLP7	23.4	231	147	8	45	273	153	355	2.5e-06	54.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene031136.t1	A0A072VKT8	74.6	248	58	3	33	278	156	400	9.0e-106	392.9
MS.gene031136.t1	A0A072VKT8	93.3	30	2	0	4	33	3	32	1.2e-04	57.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene023887	MS.gene031136	PPI
MS.gene27749	MS.gene031136	PPI
MS.gene52258	MS.gene031136	PPI
MS.gene031136	MS.gene27635	PPI
MS.gene76056	MS.gene031136	PPI
MS.gene85826	MS.gene031136	PPI
MS.gene42222	MS.gene031136	PPI
MS.gene99022	MS.gene031136	PPI
MS.gene52164	MS.gene031136	PPI
MS.gene023893	MS.gene031136	PPI
MS.gene27636	MS.gene031136	PPI
MS.gene031136	MS.gene42428	PPI
MS.gene27750	MS.gene031136	PPI
MS.gene52697	MS.gene031136	PPI
MS.gene27747	MS.gene031136	PPI
MS.gene27639	MS.gene031136	PPI
MS.gene95450	MS.gene031136	PPI
MS.gene031136	MS.gene023890	PPI
MS.gene49592	MS.gene031136	PPI
MS.gene85835	MS.gene031136	PPI
MS.gene52261	MS.gene031136	PPI
MS.gene52262	MS.gene031136	PPI
MS.gene73726	MS.gene031136	PPI
MS.gene27637	MS.gene031136	PPI
MS.gene42430	MS.gene031136	PPI
MS.gene023888	MS.gene031136	PPI
MS.gene031136	MS.gene97317	PPI
MS.gene73723	MS.gene031136	PPI
MS.gene066289	MS.gene031136	PPI
MS.gene023784	MS.gene031136	PPI
MS.gene42226	MS.gene031136	PPI
MS.gene27753	MS.gene031136	PPI
MS.gene22627	MS.gene031136	PPI
MS.gene031136	MS.gene49592	PPI
MS.gene99024	MS.gene031136	PPI
MS.gene52163	MS.gene031136	PPI
MS.gene52913	MS.gene031136	PPI
MS.gene42431	MS.gene031136	PPI
MS.gene94239	MS.gene031136	PPI
MS.gene42429	MS.gene031136	PPI
MS.gene99023	MS.gene031136	PPI
MS.gene035137	MS.gene031136	PPI
MS.gene031136	MS.gene95450	PPI
MS.gene97317	MS.gene031136	PPI
MS.gene52253	MS.gene031136	PPI
MS.gene44542	MS.gene031136	PPI
MS.gene023892	MS.gene031136	PPI
MS.gene27745	MS.gene031136	PPI
MS.gene27748	MS.gene031136	PPI
MS.gene52166	MS.gene031136	PPI
MS.gene027042	MS.gene031136	PPI
MS.gene52259	MS.gene031136	PPI
MS.gene035135	MS.gene031136	PPI
MS.gene52255	MS.gene031136	PPI
MS.gene52263	MS.gene031136	PPI
MS.gene94237	MS.gene031136	PPI
MS.gene73460	MS.gene031136	PPI
MS.gene031136	MS.gene27639	PPI
MS.gene29651	MS.gene031136	PPI
MS.gene76061	MS.gene031136	PPI
MS.gene49594	MS.gene031136	PPI
MS.gene023891	MS.gene031136	PPI
MS.gene42224	MS.gene031136	PPI
MS.gene86085	MS.gene031136	PPI
MS.gene032784	MS.gene031136	PPI
MS.gene42223	MS.gene031136	PPI
MS.gene29654	MS.gene031136	PPI
MS.gene023785	MS.gene031136	PPI
MS.gene032780	MS.gene031136	PPI
MS.gene066291	MS.gene031136	PPI
MS.gene041287	MS.gene031136	PPI
MS.gene42432	MS.gene031136	PPI
MS.gene42433	MS.gene031136	PPI
MS.gene43191	MS.gene031136	PPI
MS.gene031136	MS.gene42432	PPI
MS.gene27635	MS.gene031136	PPI
MS.gene031136	MS.gene52913	PPI
MS.gene023890	MS.gene031136	PPI
MS.gene76059	MS.gene031136	PPI
MS.gene46208	MS.gene031136	PPI
MS.gene42428	MS.gene031136	PPI
MS.gene023787	MS.gene031136	PPI
MS.gene032785	MS.gene031136	PPI
MS.gene27751	MS.gene031136	PPI
MS.gene031137	MS.gene031136	PPI
MS.gene52254	MS.gene031136	PPI
MS.gene031136	MS.gene76059	PPI
MS.gene49593	MS.gene031136	PPI
MS.gene066292	MS.gene031136	PPI
MS.gene023889	MS.gene031136	PPI
MS.gene029514	MS.gene031136	PPI
MS.gene022086	MS.gene031136	PPI
MS.gene27754	MS.gene031136	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene031136.t1	MTR_1g064570	74.597	248	58	3	33	278	156	400	1.09e-132	381
MS.gene031136.t1	MTR_5g038260	55.020	249	100	4	33	278	144	383	5.16e-90	272
MS.gene031136.t1	MTR_5g038230	48.980	245	91	5	33	276	142	353	6.35e-71	222
MS.gene031136.t1	MTR_5g082780	41.772	237	110	6	13	245	18	230	9.05e-50	164
MS.gene031136.t1	MTR_7g076100	39.441	322	126	11	2	278	3	300	9.37e-50	166
MS.gene031136.t1	MTR_1g108740	41.463	246	105	7	33	276	136	344	3.36e-43	150
MS.gene031136.t1	MTR_6g023955	92.105	76	6	0	33	108	77	152	1.57e-42	145
MS.gene031136.t1	MTR_6g023955	83.871	62	10	0	217	278	149	210	1.54e-32	119
MS.gene031136.t1	MTR_7g077660	40.684	263	101	10	33	278	144	368	1.20e-39	142
MS.gene031136.t1	MTR_7g077620	39.764	254	116	11	33	276	144	370	6.01e-38	137
MS.gene031136.t1	MTR_7g077650	38.290	269	104	12	33	278	143	372	1.39e-35	131
MS.gene031136.t1	MTR_7g076110	37.786	262	124	11	29	278	79	313	3.80e-35	129
MS.gene031136.t1	MTR_5g082770	47.059	170	75	4	33	202	136	290	2.44e-33	123
MS.gene031136.t1	MTR_7g076130	36.552	145	73	4	48	185	16	148	2.01e-16	75.1
MS.gene031136.t1	MTR_3g114990	27.434	226	142	9	29	250	173	380	2.13e-12	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 50 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTATGTCGGCTTCGTATTT+TGG	0.208690	6.2:+8814551	MS.gene031136:CDS
AATGTTAAAGCTTGATAGTT+TGG	0.240213	6.2:+8814490	MS.gene031136:CDS
TAAAAGCTGGACAAAAGTTT+TGG	0.255927	6.2:+8814117	MS.gene031136:CDS
TATGTTGTAGTTGCAATTTA+TGG	0.256703	6.2:+8814071	MS.gene031136:CDS
TGGCTTGTAAGGAAATTTAT+TGG	0.269879	6.2:+8814356	MS.gene031136:CDS
TTCATATCAAATGGTCCATT+AGG	0.289459	6.2:-8814641	None:intergenic
TCATATCAAATGGTCCATTA+GGG	0.347171	6.2:-8814640	None:intergenic
GTCAATGGAGGCAGTAGATT+GGG	0.349372	6.2:+8813584	None:intergenic
CGAAGTGTATAAGTTGGAAT+TGG	0.356208	6.2:+8814442	MS.gene031136:CDS
ATGTTAAAGCTTGATAGTTT+GGG	0.391733	6.2:+8814491	MS.gene031136:CDS
TCCTAATGTTGTTTCACCAT+GGG	0.397638	6.2:+8814280	MS.gene031136:CDS
AGGGAGACTTGTGGCTTGTA+AGG	0.407147	6.2:+8814345	MS.gene031136:CDS
AGCTATTATTCCCACTGAAA+TGG	0.434392	6.2:-8814755	None:intergenic
TGTCAATGGAGGCAGTAGAT+TGG	0.445882	6.2:+8813583	None:intergenic
TGTCTTGCTTTCATAAAAGC+TGG	0.450654	6.2:+8814104	MS.gene031136:CDS
AAAATCTATAATGTAAAAGA+TGG	0.455567	6.2:+8814662	MS.gene031136:CDS
TATCGGCAAATCCTACAATC+AGG	0.460348	6.2:+8814039	MS.gene031136:CDS
GTTCACACGGATGCCACCTT+CGG	0.463341	6.2:+8814718	MS.gene031136:CDS
AAGATTCGAAGTGTATAAGT+TGG	0.476468	6.2:+8814436	MS.gene031136:CDS
GCACCGGATCCTTACCCTAA+TGG	0.478062	6.2:+8814626	MS.gene031136:CDS
TAATCGTGAGGCCTGATTGT+AGG	0.479756	6.2:-8814050	None:intergenic
CCCCATGGTGAAACAACATT+AGG	0.481080	6.2:-8814281	None:intergenic
AGCATTGCAATTTCGAACAT+TGG	0.498979	6.2:+8814696	MS.gene031136:CDS
TCATCATCAGTGTCATCATC+GGG	0.504068	6.2:-8814383	None:intergenic
TTCATCATCAGTGTCATCAT+CGG	0.513248	6.2:-8814384	None:intergenic
GGTTCTTCCACCATTTCAGT+GGG	0.514018	6.2:+8814745	MS.gene031136:CDS
GGGTTCTTCCACCATTTCAG+TGG	0.530111	6.2:+8814744	MS.gene031136:CDS
TAATGTTGTTTCACCATGGG+GGG	0.533333	6.2:+8814283	MS.gene031136:CDS
CACGGATGCCACCTTCGGTG+TGG	0.534966	6.2:+8814723	MS.gene031136:CDS
TAGTCTATGCTGCGGGACGA+TGG	0.540068	6.2:+8814195	MS.gene031136:CDS
TCAAATGGTCCATTAGGGTA+AGG	0.543154	6.2:-8814635	None:intergenic
TTCCTAATGTTGTTTCACCA+TGG	0.544368	6.2:+8814279	MS.gene031136:CDS
ACGGATGCCACCTTCGGTGT+GGG	0.551054	6.2:+8814724	MS.gene031136:CDS
TGATTATTTCGAAGAAGCAC+CGG	0.565311	6.2:+8814610	MS.gene031136:CDS
GGTCCATTAGGGTAAGGATC+CGG	0.584997	6.2:-8814629	None:intergenic
GGAAGAACCCACACCGAAGG+TGG	0.585668	6.2:-8814731	None:intergenic
AAAGGGTTAGTCTATGCTGC+GGG	0.586027	6.2:+8814188	MS.gene031136:CDS
TAGTGATTCTGTATCTATGT+CGG	0.590343	6.2:+8814538	MS.gene031136:CDS
CCTAATGTTGTTTCACCATG+GGG	0.597547	6.2:+8814281	MS.gene031136:CDS
ATTTCGAACATTGGTTCACA+CGG	0.602276	6.2:+8814705	MS.gene031136:CDS
GATAGTAACTTGCCTAGTAG+TGG	0.603948	6.2:+8814407	MS.gene031136:CDS
TATTATTCCCACTGAAATGG+TGG	0.613749	6.2:-8814752	None:intergenic
TCAATGGAGGCAGTAGATTG+GGG	0.615269	6.2:+8813585	None:intergenic
TAAAGGGTTAGTCTATGCTG+CGG	0.625231	6.2:+8814187	MS.gene031136:CDS
AATCATTGGAGGGAGACTTG+TGG	0.640759	6.2:+8814336	MS.gene031136:CDS
GGTGGAAGAACCCACACCGA+AGG	0.641630	6.2:-8814734	None:intergenic
TTGGAATTGGATCTTCAAAG+TGG	0.643699	6.2:+8814455	MS.gene031136:CDS
CTAATGTTGTTTCACCATGG+GGG	0.657132	6.2:+8814282	MS.gene031136:CDS
CGATCACATTTATTTCAGCG+TGG	0.681214	6.2:+8813662	MS.gene031136:CDS
GCAACTACAACATAATCGTG+AGG	0.708433	6.2:-8814062	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATCTATAATGTAAAAGA+TGG	+	chr6.2:8814662-8814681	MS.gene031136:CDS	15.0%
!!!	TTATAGATTTTCATATCAAA+TGG	-	chr6.2:8814653-8814672	None:intergenic	15.0%
!!	TTGTTAAAAATCAAACTAAG+AGG	-	chr6.2:8813627-8813646	None:intergenic	20.0%
!!!	AGCGATGTTATATTTTATAA+AGG	+	chr6.2:8814170-8814189	MS.gene031136:CDS	20.0%
!!!	GCGATGTTATATTTTATAAA+GGG	+	chr6.2:8814171-8814190	MS.gene031136:CDS	20.0%
!!!	GTAATACATTGTTTTTGATT+TGG	-	chr6.2:8813734-8813753	None:intergenic	20.0%
!!!	TTTTGGTAATTATCTACAAA+AGG	+	chr6.2:8814568-8814587	MS.gene031136:CDS	20.0%
!	AGAACAAAGAGATGTTTATA+TGG	+	chr6.2:8813786-8813805	MS.gene031136:intron	25.0%
!	CTAACTCTTCTATATATATC+TGG	-	chr6.2:8813987-8814006	None:intergenic	25.0%
!	GAACAAAGAGATGTTTATAT+GGG	+	chr6.2:8813787-8813806	MS.gene031136:intron	25.0%
!	TAGGGTTATTATTGTAAGTT+TGG	-	chr6.2:8813913-8813932	None:intergenic	25.0%
!	TATGTTGTAGTTGCAATTTA+TGG	+	chr6.2:8814071-8814090	MS.gene031136:CDS	25.0%
!	TTATGAATGTAACGTTCATA+AGG	+	chr6.2:8814010-8814029	MS.gene031136:intron	25.0%
!!	AATGTTAAAGCTTGATAGTT+TGG	+	chr6.2:8814490-8814509	MS.gene031136:CDS	25.0%
!!	AGCATATTTTGTGAAATCAT+TGG	+	chr6.2:8814322-8814341	MS.gene031136:CDS	25.0%
!!	ATATTTTGTGAAATCATTGG+AGG	+	chr6.2:8814325-8814344	MS.gene031136:CDS	25.0%
!!	ATGGAAACTAGATTTTTGAA+GGG	-	chr6.2:8813942-8813961	None:intergenic	25.0%
!!	ATGTTAAAGCTTGATAGTTT+GGG	+	chr6.2:8814491-8814510	MS.gene031136:CDS	25.0%
!!	TATTTTGTGAAATCATTGGA+GGG	+	chr6.2:8814326-8814345	MS.gene031136:CDS	25.0%
!!	TTGATAACTAAACTTTGCAA+TGG	-	chr6.2:8813706-8813725	None:intergenic	25.0%
!!	TTTTGATATTTGTAACTCGA+AGG	+	chr6.2:8814232-8814251	MS.gene031136:CDS	25.0%
!!!	ATTTTTGAAGGGATTTAGTA+GGG	-	chr6.2:8813931-8813950	None:intergenic	25.0%
!!!	CGTTCATAAGGTTATTTTAT+CGG	+	chr6.2:8814022-8814041	MS.gene031136:intron	25.0%
	AAGATTCGAAGTGTATAAGT+TGG	+	chr6.2:8814436-8814455	MS.gene031136:CDS	30.0%
	ATATATATCTGGCATGTAGA+TGG	-	chr6.2:8813976-8813995	None:intergenic	30.0%
	TAATGATTCCCACAAAAAGA+AGG	+	chr6.2:8813760-8813779	MS.gene031136:intron	30.0%
	TAGTGATTCTGTATCTATGT+CGG	+	chr6.2:8814538-8814557	MS.gene031136:CDS	30.0%
	TATATATCTGGCATGTAGAT+GGG	-	chr6.2:8813975-8813994	None:intergenic	30.0%
	TCATATCAAATGGTCCATTA+GGG	-	chr6.2:8814643-8814662	None:intergenic	30.0%
	TTCATATCAAATGGTCCATT+AGG	-	chr6.2:8814644-8814663	None:intergenic	30.0%
!	AATCTTTTAGTACCACTACT+AGG	-	chr6.2:8814422-8814441	None:intergenic	30.0%
!	GATGGAAACTAGATTTTTGA+AGG	-	chr6.2:8813943-8813962	None:intergenic	30.0%
!	TAAAAGCTGGACAAAAGTTT+TGG	+	chr6.2:8814117-8814136	MS.gene031136:CDS	30.0%
!	TGGCTTGTAAGGAAATTTAT+TGG	+	chr6.2:8814356-8814375	MS.gene031136:CDS	30.0%
!	TTGGAAGTGGTAAATTTTGT+TGG	-	chr6.2:8813820-8813839	None:intergenic	30.0%
!!	GATTTTTGAAGGGATTTAGT+AGG	-	chr6.2:8813932-8813951	None:intergenic	30.0%
!!!	GGACACAATGTTTTATTTGT+GGG	+	chr6.2:8814512-8814531	MS.gene031136:CDS	30.0%
	AGCATTGCAATTTCGAACAT+TGG	+	chr6.2:8814696-8814715	MS.gene031136:CDS	35.0%
	TGTCTTGCTTTCATAAAAGC+TGG	+	chr6.2:8814104-8814123	MS.gene031136:CDS	35.0%
	TGTTATAAGGGAGTGGTAAT+TGG	-	chr6.2:8813839-8813858	None:intergenic	35.0%
	TTCATCATCAGTGTCATCAT+CGG	-	chr6.2:8814387-8814406	None:intergenic	35.0%
	TTGGAATTGGATCTTCAAAG+TGG	+	chr6.2:8814455-8814474	MS.gene031136:CDS	35.0%
	TTTGTGGGAATCATTAGCAT+AGG	-	chr6.2:8813756-8813775	None:intergenic	35.0%
!	CACAAAGCCTCTTGTTATAA+GGG	-	chr6.2:8813851-8813870	None:intergenic	35.0%
!	CGAAGTGTATAAGTTGGAAT+TGG	+	chr6.2:8814442-8814461	MS.gene031136:CDS	35.0%
!	GTTCTACACCTTCTTTTTGT+GGG	-	chr6.2:8813771-8813790	None:intergenic	35.0%
!	TGATTATTTCGAAGAAGCAC+CGG	+	chr6.2:8814610-8814629	MS.gene031136:CDS	35.0%
!	TGTTCTACACCTTCTTTTTG+TGG	-	chr6.2:8813772-8813791	None:intergenic	35.0%
!!	ATTTCGAACATTGGTTCACA+CGG	+	chr6.2:8814705-8814724	MS.gene031136:CDS	35.0%
!!	TCCTAATGTTGTTTCACCAT+GGG	+	chr6.2:8814280-8814299	MS.gene031136:CDS	35.0%
!!	TTCCTAATGTTGTTTCACCA+TGG	+	chr6.2:8814279-8814298	MS.gene031136:CDS	35.0%
!!!	GGGACACAATGTTTTATTTG+TGG	+	chr6.2:8814511-8814530	MS.gene031136:CDS	35.0%
	CCTTATAACAAGAGGCTTTG+TGG	+	chr6.2:8813849-8813868	MS.gene031136:intron	40.0%
	CGATCACATTTATTTCAGCG+TGG	+	chr6.2:8813662-8813681	MS.gene031136:CDS	40.0%
	GCAACTACAACATAATCGTG+AGG	-	chr6.2:8814065-8814084	None:intergenic	40.0%
	TACCACTCCCTTATAACAAG+AGG	+	chr6.2:8813841-8813860	MS.gene031136:intron	40.0%
	TATCGGCAAATCCTACAATC+AGG	+	chr6.2:8814039-8814058	MS.gene031136:CDS	40.0%
	TCAAATGGTCCATTAGGGTA+AGG	-	chr6.2:8814638-8814657	None:intergenic	40.0%
	TCATCATCAGTGTCATCATC+GGG	-	chr6.2:8814386-8814405	None:intergenic	40.0%
	TTGTGGTTCAAGTCATGGTT+GGG	+	chr6.2:8813866-8813885	MS.gene031136:intron	40.0%
	TTTGTGGTTCAAGTCATGGT+TGG	+	chr6.2:8813865-8813884	MS.gene031136:intron	40.0%
!	CCACAAAGCCTCTTGTTATA+AGG	-	chr6.2:8813852-8813871	None:intergenic	40.0%
!	GATAGTAACTTGCCTAGTAG+TGG	+	chr6.2:8814407-8814426	MS.gene031136:CDS	40.0%
!!	CCTAATGTTGTTTCACCATG+GGG	+	chr6.2:8814281-8814300	MS.gene031136:CDS	40.0%
!!	CTAATGTTGTTTCACCATGG+GGG	+	chr6.2:8814282-8814301	MS.gene031136:CDS	40.0%
!!	TAAAGGGTTAGTCTATGCTG+CGG	+	chr6.2:8814187-8814206	MS.gene031136:CDS	40.0%
!!	TAATGTTGTTTCACCATGGG+GGG	+	chr6.2:8814283-8814302	MS.gene031136:CDS	40.0%
!!!	TCTATGTCGGCTTCGTATTT+TGG	+	chr6.2:8814551-8814570	MS.gene031136:CDS	40.0%
	AAGGGAGTGGTAATTGGAAG+TGG	-	chr6.2:8813833-8813852	None:intergenic	45.0%
	AAGTCATGGTTGGGTAGCAA+AGG	+	chr6.2:8813875-8813894	MS.gene031136:intron	45.0%
	AATCATTGGAGGGAGACTTG+TGG	+	chr6.2:8814336-8814355	MS.gene031136:CDS	45.0%
	ATATCTGGCATGTAGATGGG+TGG	-	chr6.2:8813972-8813991	None:intergenic	45.0%
	CCCCATGGTGAAACAACATT+AGG	-	chr6.2:8814284-8814303	None:intergenic	45.0%
	GCATGTAGATGGGTGGTAAA+GGG	-	chr6.2:8813965-8813984	None:intergenic	45.0%
	GGTTCTTCCACCATTTCAGT+GGG	+	chr6.2:8814745-8814764	MS.gene031136:CDS	45.0%
	TAATCGTGAGGCCTGATTGT+AGG	-	chr6.2:8814053-8814072	None:intergenic	45.0%
	TCAGCGTGGTATGCAAGAAT+TGG	+	chr6.2:8813676-8813695	MS.gene031136:intron	45.0%
!	AGCCTCTTGTTATAAGGGAG+TGG	-	chr6.2:8813846-8813865	None:intergenic	45.0%
!	AGGCTTTGTGGTTCAAGTCA+TGG	+	chr6.2:8813861-8813880	MS.gene031136:intron	45.0%
!!	AAAGGGTTAGTCTATGCTGC+GGG	+	chr6.2:8814188-8814207	MS.gene031136:CDS	45.0%
	GGCATGTAGATGGGTGGTAA+AGG	-	chr6.2:8813966-8813985	None:intergenic	50.0%
	GGGTTCTTCCACCATTTCAG+TGG	+	chr6.2:8814744-8814763	MS.gene031136:CDS	50.0%
	GGTCCATTAGGGTAAGGATC+CGG	-	chr6.2:8814632-8814651	None:intergenic	50.0%
	GTAGATGGGTGGTAAAGGGA+TGG	-	chr6.2:8813961-8813980	None:intergenic	50.0%
	TCATGGTTGGGTAGCAAAGG+TGG	+	chr6.2:8813878-8813897	MS.gene031136:intron	50.0%
	TGAGCAAAATCATCCCCCCA+TGG	-	chr6.2:8814299-8814318	None:intergenic	50.0%
!	AGGGAGACTTGTGGCTTGTA+AGG	+	chr6.2:8814345-8814364	MS.gene031136:CDS	50.0%
	GCACCGGATCCTTACCCTAA+TGG	+	chr6.2:8814626-8814645	MS.gene031136:CDS	55.0%
	GTTCACACGGATGCCACCTT+CGG	+	chr6.2:8814718-8814737	MS.gene031136:CDS	55.0%
	TAGTCTATGCTGCGGGACGA+TGG	+	chr6.2:8814195-8814214	MS.gene031136:CDS	55.0%
	GGAAGAACCCACACCGAAGG+TGG	-	chr6.2:8814734-8814753	None:intergenic	60.0%
	GGTGGAAGAACCCACACCGA+AGG	-	chr6.2:8814737-8814756	None:intergenic	60.0%
!	ACGGATGCCACCTTCGGTGT+GGG	+	chr6.2:8814724-8814743	MS.gene031136:CDS	60.0%
	CACGGATGCCACCTTCGGTG+TGG	+	chr6.2:8814723-8814742	MS.gene031136:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	8813588	8814772	8813588	ID=MS.gene031136
chr6.2	mRNA	8813588	8814772	8813588	ID=MS.gene031136.t1;Parent=MS.gene031136
chr6.2	exon	8813588	8813683	8813588	ID=MS.gene031136.t1.exon1;Parent=MS.gene031136.t1
chr6.2	CDS	8813588	8813683	8813588	ID=cds.MS.gene031136.t1;Parent=MS.gene031136.t1
chr6.2	exon	8814032	8814772	8814032	ID=MS.gene031136.t1.exon2;Parent=MS.gene031136.t1
chr6.2	CDS	8814032	8814772	8814032	ID=cds.MS.gene031136.t1;Parent=MS.gene031136.t1

Gene Sequence

>MS.gene031136

ATGGAGGCAGTAGATTGGGGAAACTTAGAAGCACTTCCTCTTAGTTTGATTTTTAACAAGTTAGTAGAGCGTATCGATCACATTTATTTCAGCGTGGTATGCAAGAATTGGTATTCCATTGCAAAGTTTAGTTATCAAAATCGCCAAATCAAAAACAATGTATTACCTATGCTAATGATTCCCACAAAAAGAAGGTGTAGAACAAAGAGATGTTTATATGGGATTTCATCCAACAAAATTTACCACTTCCAATTACCACTCCCTTATAACAAGAGGCTTTGTGGTTCAAGTCATGGTTGGGTAGCAAAGGTGGATTTTATTTCCAAACTTACAATAATAACCCTACTAAATCCCTTCAAAAATCTAGTTTCCATCCCTTTACCACCCATCTACATGCCAGATATATATAGAAGAGTTAGATATTATGAATGTAACGTTCATAAGGTTATTTTATCGGCAAATCCTACAATCAGGCCTCACGATTATGTTGTAGTTGCAATTTATGGTATGCGTAAATGTCTTGCTTTCATAAAAGCTGGACAAAAGTTTTGGACTTACGTTGATGACGACTATTTTTGCTTCAGCGATGTTATATTTTATAAAGGGTTAGTCTATGCTGCGGGACGATGGAATAACATTGTCTCTTTTGATATTTGTAACTCGAAGGATTCTTTTGATTGTGAGAAGATCATTCCTAATGTTGTTTCACCATGGGGGGATGATTTTGCTCATCGAGCATATTTTGTGAAATCATTGGAGGGAGACTTGTGGCTTGTAAGGAAATTTATTGGTTTTCCCGATGATGACACTGATGATGAAGATAGTAACTTGCCTAGTAGTGGTACTAAAAGATTCGAAGTGTATAAGTTGGAATTGGATCTTCAAAGTGGTAAGCTTATACAAATGTTAAAGCTTGATAGTTTGGGACACAATGTTTTATTTGTGGGTGATAGTGATTCTGTATCTATGTCGGCTTCGTATTTTGGTAATTATCTACAAAAGGATTCAATTTATTACACTGATGATTATTTCGAAGAAGCACCGGATCCTTACCCTAATGGACCATTTGATATGAAAATCTATAATGTAAAAGATGGAAGCTTTAGTAAGCATTGCAATTTCGAACATTGGTTCACACGGATGCCACCTTCGGTGTGGGTTCTTCCACCATTTCAGTGGGAATAA

Protein sequence

>MS.gene031136.t1

MEAVDWGNLEALPLSLIFNKLVERIDHIYFSVVILSANPTIRPHDYVVVAIYGMRKCLAFIKAGQKFWTYVDDDYFCFSDVIFYKGLVYAAGRWNNIVSFDICNSKDSFDCEKIIPNVVSPWGDDFAHRAYFVKSLEGDLWLVRKFIGFPDDDTDDEDSNLPSSGTKRFEVYKLELDLQSGKLIQMLKLDSLGHNVLFVGDSDSVSMSASYFGNYLQKDSIYYTDDYFEEAPDPYPNGPFDMKIYNVKDGSFSKHCNFEHWFTRMPPSVWVLPPFQWE