Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52163.t1 | ABN08821.1 | 91.7 | 315 | 26 | 0 | 56 | 370 | 6 | 320 | 6.00E-164 | 587 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52163.t1 | A2Q5C1 | 91.7 | 315 | 26 | 0 | 56 | 370 | 6 | 320 | 4.3e-164 | 587.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52163.t1 | MTR_7g076110 | 93.930 | 313 | 19 | 0 | 58 | 370 | 1 | 313 | 0.0 | 582 |
| MS.gene52163.t1 | MTR_7g077620 | 55.673 | 379 | 148 | 8 | 1 | 368 | 1 | 370 | 8.87e-132 | 382 |
| MS.gene52163.t1 | MTR_7g077650 | 53.109 | 386 | 151 | 12 | 1 | 370 | 1 | 372 | 1.62e-120 | 353 |
| MS.gene52163.t1 | MTR_7g077660 | 52.660 | 376 | 157 | 9 | 5 | 370 | 4 | 368 | 2.78e-117 | 345 |
| MS.gene52163.t1 | MTR_7g076100 | 60.084 | 238 | 91 | 4 | 134 | 370 | 66 | 300 | 3.35e-91 | 276 |
| MS.gene52163.t1 | MTR_7g076100 | 83.333 | 54 | 9 | 0 | 1 | 54 | 1 | 54 | 2.07e-24 | 102 |
| MS.gene52163.t1 | MTR_5g038260 | 38.660 | 388 | 205 | 14 | 6 | 370 | 6 | 383 | 1.69e-72 | 231 |
| MS.gene52163.t1 | MTR_1g108740 | 42.359 | 373 | 178 | 14 | 3 | 368 | 2 | 344 | 2.34e-72 | 229 |
| MS.gene52163.t1 | MTR_5g082770 | 44.408 | 304 | 143 | 9 | 6 | 302 | 4 | 288 | 5.35e-72 | 226 |
| MS.gene52163.t1 | MTR_5g038230 | 36.176 | 387 | 186 | 13 | 6 | 368 | 4 | 353 | 2.17e-65 | 211 |
| MS.gene52163.t1 | MTR_1g064570 | 38.350 | 412 | 194 | 16 | 5 | 370 | 3 | 400 | 3.41e-65 | 212 |
| MS.gene52163.t1 | MTR_1g016150 | 45.550 | 191 | 74 | 7 | 3 | 175 | 2 | 180 | 4.81e-42 | 147 |
| MS.gene52163.t1 | MTR_7g076130 | 56.349 | 126 | 53 | 2 | 163 | 287 | 24 | 148 | 9.23e-39 | 136 |
| MS.gene52163.t1 | MTR_5g082780 | 37.778 | 225 | 110 | 8 | 109 | 325 | 6 | 208 | 3.47e-32 | 121 |
| MS.gene52163.t1 | MTR_1g108750 | 44.000 | 150 | 53 | 4 | 6 | 154 | 4 | 123 | 5.10e-25 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 83 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCAAACCAACCATTT+TGG | 0.209572 | 7.4:-29374891 | MS.gene52163:CDS |
| GACAGTGTTCCAGAAGATTT+AGG | 0.219883 | 7.4:-29374409 | MS.gene52163:CDS |
| TTCTCATAGTAGGTAAAATT+AGG | 0.225887 | 7.4:+29374733 | None:intergenic |
| ACCATCAAAACCATCAATTT+AGG | 0.249142 | 7.4:-29375257 | MS.gene52163:CDS |
| AGTACTCTTTGTGGCTTAAA+AGG | 0.260035 | 7.4:+29375169 | None:intergenic |
| ACCTGTCATGGCTCTTCATT+TGG | 0.288626 | 7.4:-29375117 | MS.gene52163:CDS |
| ATCCCAAACCCTAAATCTTC+TGG | 0.300792 | 7.4:+29374400 | None:intergenic |
| GGAATAATACCATACTTAAA+AGG | 0.315387 | 7.4:+29375048 | None:intergenic |
| CGACGTTTACAAATTGAAAC+TGG | 0.332871 | 7.4:-29374578 | MS.gene52163:CDS |
| GTTCCAGAAGATTTAGGGTT+TGG | 0.341176 | 7.4:-29374403 | MS.gene52163:CDS |
| AATGAACAGACTTAAGAGTT+TGG | 0.348149 | 7.4:-29374530 | MS.gene52163:CDS |
| AGAAGAACTTCCTCTTAGTT+TGG | 0.350191 | 7.4:-29375361 | MS.gene52163:CDS |
| TTCCAGAAGATTTAGGGTTT+GGG | 0.356926 | 7.4:-29374402 | MS.gene52163:CDS |
| GTCATGGCTCTTCATTTGGT+TGG | 0.362670 | 7.4:-29375113 | MS.gene52163:CDS |
| GTAACTATAGGAATCCAAAA+TGG | 0.366794 | 7.4:+29374877 | None:intergenic |
| TGTAATAAATTTGTAACTAT+AGG | 0.375568 | 7.4:+29374865 | None:intergenic |
| ACAGTGTTCCAGAAGATTTA+GGG | 0.377757 | 7.4:-29374408 | MS.gene52163:CDS |
| ACACTCCGGAGATATCTTAA+AGG | 0.378694 | 7.4:+29374994 | None:intergenic |
| AAGTTTGTCCAGCATAATCT+TGG | 0.388756 | 7.4:+29374680 | None:intergenic |
| AAAAGGATTGAGTAGAGTTA+TGG | 0.390478 | 7.4:+29375065 | None:intergenic |
| GGGCTCTACCTCAATTTCAA+TGG | 0.397463 | 7.4:-29374306 | MS.gene52163:CDS |
| CACATAGATCATCTTAGATT+CGG | 0.408172 | 7.4:-29375318 | MS.gene52163:CDS |
| ATGAACAGACTTAAGAGTTT+GGG | 0.410853 | 7.4:-29374529 | MS.gene52163:CDS |
| GGCTCTACCTCAATTTCAAT+GGG | 0.416041 | 7.4:-29374305 | MS.gene52163:CDS |
| GCTGTCGTCATTTACAACTA+TGG | 0.418694 | 7.4:-29374928 | MS.gene52163:CDS |
| TCTCATAGTAGGTAAAATTA+GGG | 0.423599 | 7.4:+29374734 | None:intergenic |
| GCTAGTTATCTTCTCATAGT+AGG | 0.423741 | 7.4:+29374723 | None:intergenic |
| TACTGCTCTTGGATTCGATT+GGG | 0.430675 | 7.4:+29375205 | None:intergenic |
| ATTGAATGGAGTACTCTTTG+TGG | 0.430687 | 7.4:+29375160 | None:intergenic |
| ACGACAGCAACATAATCATC+TGG | 0.430984 | 7.4:+29374943 | None:intergenic |
| TTAGGGTCATTTGAGCGATC+AGG | 0.435005 | 7.4:+29374751 | None:intergenic |
| GACATCGAAAAGCTTTCATA+TGG | 0.441021 | 7.4:-29374604 | MS.gene52163:CDS |
| TTCGAGAGGTGGCAGACAAA+TGG | 0.442248 | 7.4:+29375023 | None:intergenic |
| GTATAGTATTCCTAAATTGA+TGG | 0.447518 | 7.4:+29375247 | None:intergenic |
| CGATGAGGAAGGTGGTAGAC+TGG | 0.455468 | 7.4:-29375392 | MS.gene52163:CDS |
| TATCTTGTGAAATCATTGAA+TGG | 0.459383 | 7.4:-29374658 | MS.gene52163:CDS |
| GATTGGGACGCTCATGATCA+TGG | 0.463327 | 7.4:+29375221 | None:intergenic |
| AATCAATCCCATTGAAATTG+AGG | 0.474667 | 7.4:+29374298 | None:intergenic |
| TAATCATCTGGGCTTATGAT+GGG | 0.479866 | 7.4:+29374955 | None:intergenic |
| TCGAGAGGTGGCAGACAAAT+GGG | 0.480481 | 7.4:+29375024 | None:intergenic |
| ATACAAGGATCTACTGCTCT+TGG | 0.483271 | 7.4:+29375194 | None:intergenic |
| ATAATCATCTGGGCTTATGA+TGG | 0.483695 | 7.4:+29374954 | None:intergenic |
| CTACTGCTCTTGGATTCGAT+TGG | 0.489995 | 7.4:+29375204 | None:intergenic |
| TAGGGTCATTTGAGCGATCA+GGG | 0.500420 | 7.4:+29374752 | None:intergenic |
| AATCATTGAATGGAGACATA+TGG | 0.507395 | 7.4:-29374648 | MS.gene52163:CDS |
| AGTTTGTCCAGCATAATCTT+GGG | 0.508944 | 7.4:+29374681 | None:intergenic |
| TTGTCAAGAACCAAACTAAG+AGG | 0.509205 | 7.4:+29375351 | None:intergenic |
| TCGGTTTCGTGTGCAAGACT+TGG | 0.511651 | 7.4:-29375299 | MS.gene52163:CDS |
| AGGAGGAGTGTTGAACTTGA+AGG | 0.513586 | 7.4:+29374777 | None:intergenic |
| ACAAGAGGCAGACACAGAAA+AGG | 0.515918 | 7.4:+29374471 | None:intergenic |
| TGTGATGGATGAAAATTGAA+TGG | 0.520449 | 7.4:+29375146 | None:intergenic |
| GTGGCTTAAAAGGCTATACA+AGG | 0.542292 | 7.4:+29375179 | None:intergenic |
| CTATAGGAATCCAAAATGGT+TGG | 0.542954 | 7.4:+29374881 | None:intergenic |
| CACCACCTTTAAGATATCTC+CGG | 0.544228 | 7.4:-29374999 | MS.gene52163:CDS |
| GGGATCTATAATGTGAAGGA+TGG | 0.545871 | 7.4:-29374382 | MS.gene52163:CDS |
| ATTGGGACGCTCATGATCAT+GGG | 0.549814 | 7.4:+29375222 | None:intergenic |
| ACCAAATGAAGAGCCATGAC+AGG | 0.552193 | 7.4:+29375116 | None:intergenic |
| GCTAGAGCCCAAGATTATGC+TGG | 0.553236 | 7.4:-29374688 | MS.gene52163:CDS |
| TGCGTCTGCTCGAAGGAAAG+TGG | 0.572553 | 7.4:+29374337 | None:intergenic |
| ATCACATTTATAACCTGTCA+TGG | 0.576549 | 7.4:-29375129 | MS.gene52163:CDS |
| ATCTGGGCTTATGATGGGGT+CGG | 0.585200 | 7.4:+29374960 | None:intergenic |
| GATGAGGAAGGTGGTAGACT+GGG | 0.589322 | 7.4:-29375391 | MS.gene52163:CDS |
| CTTTCATTAGTCCACAGTAA+CGG | 0.591490 | 7.4:-29375090 | MS.gene52163:CDS |
| CGACAGCAACATAATCATCT+GGG | 0.592571 | 7.4:+29374944 | None:intergenic |
| ATGACAGGTTATAAATGTGA+TGG | 0.594341 | 7.4:+29375131 | None:intergenic |
| GGGTCATTTGAGCGATCAGG+GGG | 0.608939 | 7.4:+29374754 | None:intergenic |
| AAGTTTCTTAACGATGAGGA+AGG | 0.609754 | 7.4:-29375403 | None:intergenic |
| AAAGGTGGTGATTCGAGAGG+TGG | 0.610801 | 7.4:+29375012 | None:intergenic |
| TTTGAACTTGGAGTAACAAG+AGG | 0.615336 | 7.4:+29374456 | None:intergenic |
| GTTTGGGATCTATAATGTGA+AGG | 0.626362 | 7.4:-29374386 | MS.gene52163:CDS |
| TTTCTTAACGATGAGGAAGG+TGG | 0.631528 | 7.4:-29375400 | None:intergenic |
| AATCATCTGGGCTTATGATG+GGG | 0.632274 | 7.4:+29374956 | None:intergenic |
| AGGGTCATTTGAGCGATCAG+GGG | 0.648257 | 7.4:+29374753 | None:intergenic |
| CTCCGGAGATATCTTAAAGG+TGG | 0.652726 | 7.4:+29374997 | None:intergenic |
| CGGCAGACAATGTAACACTC+CGG | 0.665324 | 7.4:+29374980 | None:intergenic |
| GAGTTATGGAACCGTTACTG+TGG | 0.666466 | 7.4:+29375079 | None:intergenic |
| GGGACGCTCATGATCATGGG+TGG | 0.671811 | 7.4:+29375225 | None:intergenic |
| CTTAAAGGTGGTGATTCGAG+AGG | 0.674686 | 7.4:+29375009 | None:intergenic |
| ATTGAATGGAGACATATGGA+TGG | 0.693585 | 7.4:-29374644 | MS.gene52163:CDS |
| TTGAAACTGGACACCCAGAG+TGG | 0.696035 | 7.4:-29374565 | MS.gene52163:CDS |
| GGATTGAATAGTGTCTGAGT+GGG | 0.704793 | 7.4:+29374798 | None:intergenic |
| AGAGGTGGCAGACAAATGGG+AGG | 0.713505 | 7.4:+29375027 | None:intergenic |
| AGGATTGAATAGTGTCTGAG+TGG | 0.717909 | 7.4:+29374797 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAATAAATTTGTAACTAT+AGG | + | chr7.4:29374828-29374847 | None:intergenic | 15.0% |
| !!! | AATGATGTTGTATTTTATAA+AGG | - | chr7.4:29374852-29374871 | MS.gene52163:CDS | 15.0% |
| !!! | ATTTTATTTATCGGATATTG+TGG | - | chr7.4:29375191-29375210 | MS.gene52163:CDS | 20.0% |
| ! | GGAATAATACCATACTTAAA+AGG | + | chr7.4:29374645-29374664 | None:intergenic | 25.0% |
| ! | GTATAGTATTCCTAAATTGA+TGG | + | chr7.4:29374446-29374465 | None:intergenic | 25.0% |
| ! | TATCTTGTGAAATCATTGAA+TGG | - | chr7.4:29375032-29375051 | MS.gene52163:CDS | 25.0% |
| ! | TCTCATAGTAGGTAAAATTA+GGG | + | chr7.4:29374959-29374978 | None:intergenic | 25.0% |
| ! | TTCTCATAGTAGGTAAAATT+AGG | + | chr7.4:29374960-29374979 | None:intergenic | 25.0% |
| !!! | AACTGAATCTTTTTTGAACT+TGG | + | chr7.4:29375249-29375268 | None:intergenic | 25.0% |
| !!! | GGAGACAACATTTTATTTAT+CGG | - | chr7.4:29375182-29375201 | MS.gene52163:CDS | 25.0% |
| AAAAGGATTGAGTAGAGTTA+TGG | + | chr7.4:29374628-29374647 | None:intergenic | 30.0% | |
| AATCATTGAATGGAGACATA+TGG | - | chr7.4:29375042-29375061 | MS.gene52163:CDS | 30.0% | |
| AATGAACAGACTTAAGAGTT+TGG | - | chr7.4:29375160-29375179 | MS.gene52163:CDS | 30.0% | |
| ACCATCAAAACCATCAATTT+AGG | - | chr7.4:29374433-29374452 | MS.gene52163:CDS | 30.0% | |
| ATCACATTTATAACCTGTCA+TGG | - | chr7.4:29374561-29374580 | MS.gene52163:CDS | 30.0% | |
| ATGAACAGACTTAAGAGTTT+GGG | - | chr7.4:29375161-29375180 | MS.gene52163:CDS | 30.0% | |
| ATGACAGGTTATAAATGTGA+TGG | + | chr7.4:29374562-29374581 | None:intergenic | 30.0% | |
| CACATAGATCATCTTAGATT+CGG | - | chr7.4:29374372-29374391 | MS.gene52163:CDS | 30.0% | |
| GTAACTATAGGAATCCAAAA+TGG | + | chr7.4:29374816-29374835 | None:intergenic | 30.0% | |
| ! | TTGCTCTTTTGAATGCAATA+CGG | + | chr7.4:29374788-29374807 | None:intergenic | 30.0% |
| !! | CTACTCAATCCTTTTAAGTA+TGG | - | chr7.4:29374633-29374652 | MS.gene52163:CDS | 30.0% |
| !! | TGTGATGGATGAAAATTGAA+TGG | + | chr7.4:29374547-29374566 | None:intergenic | 30.0% |
| !!! | TCCTAAATTGATGGTTTTGA+TGG | + | chr7.4:29374437-29374456 | None:intergenic | 30.0% |
| AAGTTTGTCCAGCATAATCT+TGG | + | chr7.4:29375013-29375032 | None:intergenic | 35.0% | |
| ACAGTGTTCCAGAAGATTTA+GGG | - | chr7.4:29375282-29375301 | MS.gene52163:CDS | 35.0% | |
| AGAAGAACTTCCTCTTAGTT+TGG | - | chr7.4:29374329-29374348 | MS.gene52163:CDS | 35.0% | |
| AGTACTCTTTGTGGCTTAAA+AGG | + | chr7.4:29374524-29374543 | None:intergenic | 35.0% | |
| AGTTTGTCCAGCATAATCTT+GGG | + | chr7.4:29375012-29375031 | None:intergenic | 35.0% | |
| ATAATCATCTGGGCTTATGA+TGG | + | chr7.4:29374739-29374758 | None:intergenic | 35.0% | |
| ATTGAATGGAGACATATGGA+TGG | - | chr7.4:29375046-29375065 | MS.gene52163:CDS | 35.0% | |
| CGACGTTTACAAATTGAAAC+TGG | - | chr7.4:29375112-29375131 | MS.gene52163:CDS | 35.0% | |
| CTATAGGAATCCAAAATGGT+TGG | + | chr7.4:29374812-29374831 | None:intergenic | 35.0% | |
| CTTTCATTAGTCCACAGTAA+CGG | - | chr7.4:29374600-29374619 | MS.gene52163:CDS | 35.0% | |
| GACATCGAAAAGCTTTCATA+TGG | - | chr7.4:29375086-29375105 | MS.gene52163:CDS | 35.0% | |
| GCTAGTTATCTTCTCATAGT+AGG | + | chr7.4:29374970-29374989 | None:intergenic | 35.0% | |
| TAATCATCTGGGCTTATGAT+GGG | + | chr7.4:29374738-29374757 | None:intergenic | 35.0% | |
| TTGTCAAGAACCAAACTAAG+AGG | + | chr7.4:29374342-29374361 | None:intergenic | 35.0% | |
| TTTGAACTTGGAGTAACAAG+AGG | + | chr7.4:29375237-29375256 | None:intergenic | 35.0% | |
| ! | AAAGAGCAAACCAACCATTT+TGG | - | chr7.4:29374799-29374818 | MS.gene52163:CDS | 35.0% |
| ! | ATTGAATGGAGTACTCTTTG+TGG | + | chr7.4:29374533-29374552 | None:intergenic | 35.0% |
| ! | GTTTGGGATCTATAATGTGA+AGG | - | chr7.4:29375304-29375323 | MS.gene52163:CDS | 35.0% |
| ! | TTCCAGAAGATTTAGGGTTT+GGG | - | chr7.4:29375288-29375307 | MS.gene52163:CDS | 35.0% |
| ! | TTGTACAAGTTTTCCACTCT+GGG | + | chr7.4:29375141-29375160 | None:intergenic | 35.0% |
| ! | TTTGTACAAGTTTTCCACTC+TGG | + | chr7.4:29375142-29375161 | None:intergenic | 35.0% |
| AAAAAATTGCGTCTGCTCGA+AGG | + | chr7.4:29375363-29375382 | None:intergenic | 40.0% | |
| AATCATCTGGGCTTATGATG+GGG | + | chr7.4:29374737-29374756 | None:intergenic | 40.0% | |
| ACACTCCGGAGATATCTTAA+AGG | + | chr7.4:29374699-29374718 | None:intergenic | 40.0% | |
| ACGACAGCAACATAATCATC+TGG | + | chr7.4:29374750-29374769 | None:intergenic | 40.0% | |
| AGGATTGAATAGTGTCTGAG+TGG | + | chr7.4:29374896-29374915 | None:intergenic | 40.0% | |
| ATACAAGGATCTACTGCTCT+TGG | + | chr7.4:29374499-29374518 | None:intergenic | 40.0% | |
| ATCCCAAACCCTAAATCTTC+TGG | + | chr7.4:29375293-29375312 | None:intergenic | 40.0% | |
| CGACAGCAACATAATCATCT+GGG | + | chr7.4:29374749-29374768 | None:intergenic | 40.0% | |
| GACAGTGTTCCAGAAGATTT+AGG | - | chr7.4:29375281-29375300 | MS.gene52163:CDS | 40.0% | |
| GCTGTCGTCATTTACAACTA+TGG | - | chr7.4:29374762-29374781 | MS.gene52163:CDS | 40.0% | |
| GGATTGAATAGTGTCTGAGT+GGG | + | chr7.4:29374895-29374914 | None:intergenic | 40.0% | |
| GGCTCTACCTCAATTTCAAT+GGG | - | chr7.4:29375385-29375404 | MS.gene52163:CDS | 40.0% | |
| GGGATCTATAATGTGAAGGA+TGG | - | chr7.4:29375308-29375327 | MS.gene52163:CDS | 40.0% | |
| GTGGCTTAAAAGGCTATACA+AGG | + | chr7.4:29374514-29374533 | None:intergenic | 40.0% | |
| TACTGCTCTTGGATTCGATT+GGG | + | chr7.4:29374488-29374507 | None:intergenic | 40.0% | |
| ! | GTTCCAGAAGATTTAGGGTT+TGG | - | chr7.4:29375287-29375306 | MS.gene52163:CDS | 40.0% |
| !! | CACCACCTTTAAGATATCTC+CGG | - | chr7.4:29374691-29374710 | MS.gene52163:CDS | 40.0% |
| !!! | CGAGCAGACGCAATTTTTTT+GGG | - | chr7.4:29375364-29375383 | MS.gene52163:CDS | 40.0% |
| !!! | TCGAGCAGACGCAATTTTTT+TGG | - | chr7.4:29375363-29375382 | MS.gene52163:CDS | 40.0% |
| ACAAGAGGCAGACACAGAAA+AGG | + | chr7.4:29375222-29375241 | None:intergenic | 45.0% | |
| ACCAAATGAAGAGCCATGAC+AGG | + | chr7.4:29374577-29374596 | None:intergenic | 45.0% | |
| ACCTGTCATGGCTCTTCATT+TGG | - | chr7.4:29374573-29374592 | MS.gene52163:CDS | 45.0% | |
| ATTGGGACGCTCATGATCAT+GGG | + | chr7.4:29374471-29374490 | None:intergenic | 45.0% | |
| CTACTGCTCTTGGATTCGAT+TGG | + | chr7.4:29374489-29374508 | None:intergenic | 45.0% | |
| CTCCGGAGATATCTTAAAGG+TGG | + | chr7.4:29374696-29374715 | None:intergenic | 45.0% | |
| CTTAAAGGTGGTGATTCGAG+AGG | + | chr7.4:29374684-29374703 | None:intergenic | 45.0% | |
| GAGTTATGGAACCGTTACTG+TGG | + | chr7.4:29374614-29374633 | None:intergenic | 45.0% | |
| GGGCTCTACCTCAATTTCAA+TGG | - | chr7.4:29375384-29375403 | MS.gene52163:CDS | 45.0% | |
| GTCATGGCTCTTCATTTGGT+TGG | - | chr7.4:29374577-29374596 | MS.gene52163:CDS | 45.0% | |
| TAGGGTCATTTGAGCGATCA+GGG | + | chr7.4:29374941-29374960 | None:intergenic | 45.0% | |
| TTAGGGTCATTTGAGCGATC+AGG | + | chr7.4:29374942-29374961 | None:intergenic | 45.0% | |
| !! | AGGAGGAGTGTTGAACTTGA+AGG | + | chr7.4:29374916-29374935 | None:intergenic | 45.0% |
| AAAGGTGGTGATTCGAGAGG+TGG | + | chr7.4:29374681-29374700 | None:intergenic | 50.0% | |
| AGGGTCATTTGAGCGATCAG+GGG | + | chr7.4:29374940-29374959 | None:intergenic | 50.0% | |
| CGGCAGACAATGTAACACTC+CGG | + | chr7.4:29374713-29374732 | None:intergenic | 50.0% | |
| GATTGGGACGCTCATGATCA+TGG | + | chr7.4:29374472-29374491 | None:intergenic | 50.0% | |
| GCTAGAGCCCAAGATTATGC+TGG | - | chr7.4:29375002-29375021 | MS.gene52163:CDS | 50.0% | |
| TCGAGAGGTGGCAGACAAAT+GGG | + | chr7.4:29374669-29374688 | None:intergenic | 50.0% | |
| TCGGTTTCGTGTGCAAGACT+TGG | - | chr7.4:29374391-29374410 | MS.gene52163:CDS | 50.0% | |
| TTCGAGAGGTGGCAGACAAA+TGG | + | chr7.4:29374670-29374689 | None:intergenic | 50.0% | |
| TTGAAACTGGACACCCAGAG+TGG | - | chr7.4:29375125-29375144 | MS.gene52163:CDS | 50.0% | |
| ! | ATCTGGGCTTATGATGGGGT+CGG | + | chr7.4:29374733-29374752 | None:intergenic | 50.0% |
| AGAGGTGGCAGACAAATGGG+AGG | + | chr7.4:29374666-29374685 | None:intergenic | 55.0% | |
| GGGTCATTTGAGCGATCAGG+GGG | + | chr7.4:29374939-29374958 | None:intergenic | 55.0% | |
| TCATTTGAGCGATCAGGGGG+AGG | + | chr7.4:29374936-29374955 | None:intergenic | 55.0% | |
| TGCGTCTGCTCGAAGGAAAG+TGG | + | chr7.4:29375356-29375375 | None:intergenic | 55.0% | |
| GGGACGCTCATGATCATGGG+TGG | + | chr7.4:29374468-29374487 | None:intergenic | 60.0% | |
| TTTGAGCGATCAGGGGGAGG+AGG | + | chr7.4:29374933-29374952 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 29374300 | 29375412 | 29374300 | ID=MS.gene52163 |
| chr7.4 | mRNA | 29374300 | 29375412 | 29374300 | ID=MS.gene52163.t1;Parent=MS.gene52163 |
| chr7.4 | exon | 29374300 | 29375412 | 29374300 | ID=MS.gene52163.t1.exon1;Parent=MS.gene52163.t1 |
| chr7.4 | CDS | 29374300 | 29375412 | 29374300 | ID=cds.MS.gene52163.t1;Parent=MS.gene52163.t1 |
| Gene Sequence |
| Protein sequence |