AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76059

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76059.t1 MTR_5g082780 80.519 231 44 1 107 337 1 230 1.36e-131 376
MS.gene76059.t1 MTR_5g082770 58.703 293 91 5 27 293 1 289 4.29e-106 313
MS.gene76059.t1 MTR_5g038260 44.271 384 168 12 27 369 3 381 3.19e-92 281
MS.gene76059.t1 MTR_1g064570 42.439 410 157 13 27 369 1 398 1.48e-91 280
MS.gene76059.t1 MTR_5g038230 44.947 376 151 12 27 369 1 353 5.58e-91 277
MS.gene76059.t1 MTR_1g108740 40.483 373 156 10 30 369 5 344 1.44e-76 240
MS.gene76059.t1 MTR_7g077620 40.863 394 155 16 28 369 3 370 1.13e-68 221
MS.gene76059.t1 MTR_7g077660 40.306 392 154 19 29 369 4 366 4.69e-68 219
MS.gene76059.t1 MTR_7g077650 38.539 397 160 17 28 369 3 370 9.89e-66 213
MS.gene76059.t1 MTR_7g076100 35.246 366 146 15 26 369 2 298 4.51e-43 152
MS.gene76059.t1 MTR_7g076110 36.552 290 142 13 102 369 42 311 5.04e-37 136
MS.gene76059.t1 MTR_1g016150 36.101 277 128 10 30 304 5 234 3.61e-35 129
MS.gene76059.t1 MTR_1g108750 45.926 135 60 4 27 159 1 124 2.16e-25 99.8
MS.gene76059.t1 MTR_3g114990 25.061 411 218 20 26 367 19 408 1.19e-15 78.2
MS.gene76059.t1 MTR_3g030380 22.487 378 234 14 28 367 3 359 2.89e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 72 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTAATCTCATTGGAAATT+TGG 0.118149 5.2:+70741404 None:intergenic
GGGCTGGCGTCATTCCTTTA+TGG 0.157856 5.2:-70741942 MS.gene76059:CDS
TAGCATTTGTTTAAACTTTC+CGG 0.160572 5.2:+70741685 None:intergenic
GCAAGTCACACTAACATTTA+TGG 0.168006 5.2:-70742019 MS.gene76059:CDS
GGAACTAGATTGGGCAAATT+TGG 0.170985 5.2:-70742470 MS.gene76059:CDS
AGCAGCAGCCACCACCTTTC+TGG 0.178652 5.2:-70741433 MS.gene76059:CDS
TACAAACATCTTTGTGTTCT+TGG 0.184549 5.2:+70742295 None:intergenic
TAATCATTTGGTCTTGTTAT+AGG 0.208163 5.2:+70742052 None:intergenic
CAAATAGATCACATTTGTTT+TGG 0.284203 5.2:-70742406 MS.gene76059:CDS
TCGAGGGTTGGAAGACTAAT+AGG 0.288442 5.2:+70742130 None:intergenic
ATAGGAGCAACATTCTTAAA+AGG 0.302714 5.2:+70742148 None:intergenic
AACAAGACCAAATGATTATA+TGG 0.314220 5.2:-70742047 MS.gene76059:CDS
GCTATGTCCTCAATTGGATT+TGG 0.328276 5.2:+70741830 None:intergenic
CCGCACAAACAGCAGCTAAT+TGG 0.338226 5.2:-70743015 MS.gene76059:CDS
ACTTGTGGTCCATTTCATAT+AGG 0.341950 5.2:-70741518 MS.gene76059:CDS
AGCTGCTGTTTGTGCGGGTT+GGG 0.361864 5.2:+70743021 None:intergenic
AAAAGGATGCAATATTGTTA+TGG 0.365851 5.2:+70742165 None:intergenic
TTGGAATTATGTATGGTTCT+CGG 0.371456 5.2:-70741963 MS.gene76059:CDS
ACAAACATCTTTGTGTTCTT+GGG 0.378979 5.2:+70742296 None:intergenic
CTTGTGGTCCATTTCATATA+GGG 0.384722 5.2:-70741517 MS.gene76059:CDS
GCAGCAGCCACCACCTTTCT+GGG 0.385265 5.2:-70741432 MS.gene76059:CDS
TGAAAAGCTATGTCCTCAAT+TGG 0.404609 5.2:+70741824 None:intergenic
GCAACAACCATATAATCATT+TGG 0.406285 5.2:+70742040 None:intergenic
GTATCAGCTTCATACTTCTT+CGG 0.410510 5.2:-70741605 MS.gene76059:CDS
TGGTTAGAATGGAACTAGAT+TGG 0.415806 5.2:-70742480 MS.gene76059:intron
TGATTTAATTCTTGATAAGT+TGG 0.416195 5.2:-70742434 MS.gene76059:CDS
GGTTAGAATGGAACTAGATT+GGG 0.421888 5.2:-70742479 MS.gene76059:intron
TTATATATCCCTATATGAAA+TGG 0.424795 5.2:+70741509 None:intergenic
ATATAGGGATATATAATGTA+AGG 0.433344 5.2:-70741502 MS.gene76059:CDS
TTATCTTGTGAAGTCATTAG+AGG 0.436221 5.2:-70741786 MS.gene76059:CDS
AATCATGTTGGAATTATGTA+TGG 0.447627 5.2:-70741970 MS.gene76059:CDS
CAATTAGCTGCTGTTTGTGC+GGG 0.462568 5.2:+70743016 None:intergenic
ATAGAACATAAAATCCATAA+AGG 0.464338 5.2:+70741928 None:intergenic
TGTTCTTGGGATCATTAGCA+TGG 0.464942 5.2:+70742309 None:intergenic
ATGCTAAAGCTTGAGAGTCT+TGG 0.465110 5.2:-70741668 MS.gene76059:CDS
CCGACCTCAGATAAACTATA+TGG 0.472507 5.2:+70742100 None:intergenic
TTGGTGCCGTGTGCAAGAAT+TGG 0.477626 5.2:-70742387 MS.gene76059:CDS
ACGAGAGTTGCAGCCACCAT+TGG 0.479084 5.2:+70743045 None:intergenic
TAGCTGCTGTTTGTGCGGGT+TGG 0.487081 5.2:+70743020 None:intergenic
TGGAATTATGTATGGTTCTC+GGG 0.489094 5.2:-70741962 MS.gene76059:CDS
TTTAAATGGATACATTTGCT+TGG 0.506455 5.2:+70742261 None:intergenic
ATTATGTATGGTTCTCGGGC+TGG 0.506785 5.2:-70741958 MS.gene76059:CDS
TTGGAATTCGCTGCTGAGAC+CGG 0.508030 5.2:-70741704 MS.gene76059:CDS
CATATAGTTTATCTGAGGTC+GGG 0.519022 5.2:-70742099 MS.gene76059:CDS
TTTATCTGAGGTCGGGTACA+AGG 0.523012 5.2:-70742092 MS.gene76059:CDS
GTTGTGGATTTAGCCATGGT+TGG 0.523421 5.2:-70742213 MS.gene76059:intron
TAAAAGCGGGACAATCATGT+TGG 0.528983 5.2:-70741982 MS.gene76059:CDS
GATTCAATTTATTACACAGA+AGG 0.532428 5.2:-70741569 MS.gene76059:CDS
CCAATTAGCTGCTGTTTGTG+CGG 0.545725 5.2:+70743015 None:intergenic
CTGAAGATTATGACGAGCAA+AGG 0.546970 5.2:+70741472 None:intergenic
AAATTTGGTAAAACCCAGAA+AGG 0.548520 5.2:+70741419 None:intergenic
CCATATAGTTTATCTGAGGT+CGG 0.548904 5.2:-70742100 MS.gene76059:CDS
GGGATATATAATGTAAGGGA+TGG 0.549423 5.2:-70741497 MS.gene76059:CDS
GATAACTCCAAATCCAATTG+AGG 0.557628 5.2:-70741837 MS.gene76059:CDS
TATCTTGTGAAGTCATTAGA+GGG 0.571586 5.2:-70741785 MS.gene76059:CDS
TTAATCCTGGTCGTTATCAG+AGG 0.574420 5.2:-70741859 MS.gene76059:CDS
ATTTACATATACCTCTGTGT+TGG 0.574511 5.2:+70742976 None:intergenic
AAGTTAGATTGTGCAACTTG+TGG 0.579278 5.2:-70741533 MS.gene76059:CDS
GTTCTTGGGATCATTAGCAT+GGG 0.586772 5.2:+70742310 None:intergenic
GGTAAAACCCAGAAAGGTGG+TGG 0.590899 5.2:+70741425 None:intergenic
TATAGGGATATATAATGTAA+GGG 0.600514 5.2:-70741501 MS.gene76059:CDS
CAATCGCCAATTCTTGCACA+CGG 0.624096 5.2:+70742381 None:intergenic
TGTGAGTAAAGATCACGGTA+TGG 0.626338 5.2:-70741888 MS.gene76059:CDS
TTATTGTTGCAAGCCAACCA+TGG 0.632018 5.2:+70742200 None:intergenic
AGTCATTAGAGGGAGACTTG+TGG 0.642483 5.2:-70741775 MS.gene76059:CDS
TTTGGTAAAACCCAGAAAGG+TGG 0.643098 5.2:+70741422 None:intergenic
AGCTTAACCATCAAAATCAG+CGG 0.648160 5.2:-70742351 MS.gene76059:CDS
GTTATCCTCTGATAACGACC+AGG 0.657562 5.2:+70741854 None:intergenic
TCGACCATATAGTTTATCTG+AGG 0.671910 5.2:-70742104 MS.gene76059:CDS
TATGCTGTGAGTAAAGATCA+CGG 0.687201 5.2:-70741893 MS.gene76059:CDS
ATTAGAGGGAGACTTGTGGA+TGG 0.690554 5.2:-70741771 MS.gene76059:CDS
TTAGCAGCACACCAACACAG+AGG 0.804344 5.2:-70742987 MS.gene76059:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTTTTTTTAAAT+TGG - chr5.2:70741555-70741574 MS.gene76059:CDS 0.0%
!!! AAAAGATTTTTTACTTTTAA+GGG - chr5.2:70742708-70742727 MS.gene76059:intron 10.0%
!! ATTCATAAATTCAACATAAA+GGG - chr5.2:70741864-70741883 MS.gene76059:CDS 15.0%
!!! GAAAAGATTTTTTACTTTTA+AGG - chr5.2:70742707-70742726 MS.gene76059:intron 15.0%
!!! TTTCATTTTTTTTTTACTGA+GGG - chr5.2:70741838-70741857 MS.gene76059:CDS 15.0%
!!! TTTTCATTTTTTTTTTACTG+AGG - chr5.2:70741837-70741856 MS.gene76059:CDS 15.0%
!! AAATCATGATCAAAATTAAG+AGG - chr5.2:70741763-70741782 MS.gene76059:CDS 20.0%
!! ATAGAACATAAAATCCATAA+AGG + chr5.2:70742529-70742548 None:intergenic 20.0%
!! ATATAGGGATATATAATGTA+AGG - chr5.2:70742952-70742971 MS.gene76059:intron 20.0%
!! CAAATATGGTAATAAGAATT+TGG + chr5.2:70742222-70742241 None:intergenic 20.0%
!! GATTCATAAATTCAACATAA+AGG - chr5.2:70741863-70741882 MS.gene76059:CDS 20.0%
!! TAAGAATTTGGCAATTTAAA+TGG + chr5.2:70742210-70742229 None:intergenic 20.0%
!! TATACGAGATCATATATTTA+GGG - chr5.2:70741804-70741823 MS.gene76059:CDS 20.0%
!! TATAGGGATATATAATGTAA+GGG - chr5.2:70742953-70742972 MS.gene76059:intron 20.0%
!! TGATTTAATTCTTGATAAGT+TGG - chr5.2:70742020-70742039 MS.gene76059:CDS 20.0%
!! TTATACGAGATCATATATTT+AGG - chr5.2:70741803-70741822 MS.gene76059:CDS 20.0%
!! TTATATATCCCTATATGAAA+TGG + chr5.2:70742948-70742967 None:intergenic 20.0%
!!! CTCGTATAATTTGTAATTTA+TGG + chr5.2:70741792-70741811 None:intergenic 20.0%
!!! TTTATGGATTTTATGTTCTA+TGG - chr5.2:70742528-70742547 MS.gene76059:intron 20.0%
! AAAAATAAAACTGTCCATAG+TGG + chr5.2:70741542-70741561 None:intergenic 25.0%
! AAAAGGATGCAATATTGTTA+TGG + chr5.2:70742292-70742311 None:intergenic 25.0%
! AACAAGACCAAATGATTATA+TGG - chr5.2:70742407-70742426 MS.gene76059:CDS 25.0%
! AATCATGTTGGAATTATGTA+TGG - chr5.2:70742484-70742503 MS.gene76059:intron 25.0%
! CTATTGTATACATAGAAGAT+TGG + chr5.2:70741908-70741927 None:intergenic 25.0%
! GATTCAATTTATTACACAGA+AGG - chr5.2:70742885-70742904 MS.gene76059:intron 25.0%
! TAGCATTTGTTTAAACTTTC+CGG + chr5.2:70742772-70742791 None:intergenic 25.0%
! TTTAAATGGATACATTTGCT+TGG + chr5.2:70742196-70742215 None:intergenic 25.0%
!! ATAGTTCGTTCTTGTTATAT+TGG - chr5.2:70741954-70741973 MS.gene76059:CDS 25.0%
!! CAAATAGATCACATTTGTTT+TGG - chr5.2:70742048-70742067 MS.gene76059:CDS 25.0%
!! CTAAAAACTTTTCTCTCATT+CGG + chr5.2:70741627-70741646 None:intergenic 25.0%
!! TAAAAACTTTTCTCTCATTC+GGG + chr5.2:70741626-70741645 None:intergenic 25.0%
!! TCTTATTACCATATTTGTTG+TGG - chr5.2:70742225-70742244 MS.gene76059:intron 25.0%
!! TCTTGTTATATTGGTTAGAA+TGG - chr5.2:70741963-70741982 MS.gene76059:CDS 25.0%
!!! TAATCATTTGGTCTTGTTAT+AGG + chr5.2:70742405-70742424 None:intergenic 25.0%
!!! TCTTTTTTTTTTGTCCGTAA+TGG - chr5.2:70741506-70741525 MS.gene76059:CDS 25.0%
AAATTTGGTAAAACCCAGAA+AGG + chr5.2:70743038-70743057 None:intergenic 30.0%
ACAAACATCTTTGTGTTCTT+GGG + chr5.2:70742161-70742180 None:intergenic 30.0%
ATAGGAGCAACATTCTTAAA+AGG + chr5.2:70742309-70742328 None:intergenic 30.0%
ATTTACATATACCTCTGTGT+TGG + chr5.2:70741481-70741500 None:intergenic 30.0%
GCAACAACCATATAATCATT+TGG + chr5.2:70742417-70742436 None:intergenic 30.0%
TACAAACATCTTTGTGTTCT+TGG + chr5.2:70742162-70742181 None:intergenic 30.0%
TATCTTGTGAAGTCATTAGA+GGG - chr5.2:70742669-70742688 MS.gene76059:intron 30.0%
TTATCTTGTGAAGTCATTAG+AGG - chr5.2:70742668-70742687 MS.gene76059:intron 30.0%
TTGGAATTATGTATGGTTCT+CGG - chr5.2:70742491-70742510 MS.gene76059:intron 30.0%
! ATGGATTTTATGTTCTATGG+AGG - chr5.2:70742531-70742550 MS.gene76059:intron 30.0%
! TAAAGATTTTCACTCAACCA+AGG + chr5.2:70741684-70741703 None:intergenic 30.0%
!! AACTTGTGTTGTTTGAATGT+CGG - chr5.2:70741715-70741734 MS.gene76059:CDS 30.0%
!! ACGTTTCGCTTTTATAAAAG+CGG - chr5.2:70742458-70742477 MS.gene76059:CDS 30.0%
!!! CATTTTTTTTTTACTGAGGG+AGG - chr5.2:70741841-70741860 MS.gene76059:CDS 30.0%
!!! GATTGGCTTAATTGTAGTTT+TGG + chr5.2:70741891-70741910 None:intergenic 30.0%
!!! TGATTTTCAAGTGTACAAGT+TGG - chr5.2:70742731-70742750 MS.gene76059:intron 30.0%
AAGTTAGATTGTGCAACTTG+TGG - chr5.2:70742921-70742940 MS.gene76059:intron 35.0%
ACTTGTGGTCCATTTCATAT+AGG - chr5.2:70742936-70742955 MS.gene76059:intron 35.0%
AGCTTAACCATCAAAATCAG+CGG - chr5.2:70742103-70742122 MS.gene76059:CDS 35.0%
ATGGATGAATAGTTCCACTA+TGG - chr5.2:70741525-70741544 MS.gene76059:CDS 35.0%
ATTTGAATCCACGTTTAGAC+AGG + chr5.2:70741656-70741675 None:intergenic 35.0%
CTTGTGGTCCATTTCATATA+GGG - chr5.2:70742937-70742956 MS.gene76059:intron 35.0%
GATAACTCCAAATCCAATTG+AGG - chr5.2:70742617-70742636 MS.gene76059:intron 35.0%
GCAAGTCACACTAACATTTA+TGG - chr5.2:70742435-70742454 MS.gene76059:CDS 35.0%
GGCTAAATCCACAACAAATA+TGG + chr5.2:70742236-70742255 None:intergenic 35.0%
GGGATATATAATGTAAGGGA+TGG - chr5.2:70742957-70742976 MS.gene76059:intron 35.0%
GGTTAGAATGGAACTAGATT+GGG - chr5.2:70741975-70741994 MS.gene76059:CDS 35.0%
GTATCAGCTTCATACTTCTT+CGG - chr5.2:70742849-70742868 MS.gene76059:intron 35.0%
GTGGAACTATTCATCCATTA+CGG + chr5.2:70741523-70741542 None:intergenic 35.0%
GTGGATTCAAATAAGAACCT+TGG - chr5.2:70741664-70741683 MS.gene76059:CDS 35.0%
TATGCTGTGAGTAAAGATCA+CGG - chr5.2:70742561-70742580 MS.gene76059:intron 35.0%
TCGACCATATAGTTTATCTG+AGG - chr5.2:70742350-70742369 MS.gene76059:CDS 35.0%
TGAAAAGCTATGTCCTCAAT+TGG + chr5.2:70742633-70742652 None:intergenic 35.0%
TGGAATTATGTATGGTTCTC+GGG - chr5.2:70742492-70742511 MS.gene76059:intron 35.0%
TGGTTAGAATGGAACTAGAT+TGG - chr5.2:70741974-70741993 MS.gene76059:CDS 35.0%
! ATTGAGGACATAGCTTTTCA+TGG - chr5.2:70742633-70742652 MS.gene76059:intron 35.0%
! CATATAGTTTATCTGAGGTC+GGG - chr5.2:70742355-70742374 MS.gene76059:CDS 35.0%
! CCATATAGTTTATCTGAGGT+CGG - chr5.2:70742354-70742373 MS.gene76059:CDS 35.0%
! GGTATGGTATCTTTTAATCC+TGG - chr5.2:70742582-70742601 MS.gene76059:intron 35.0%
!! AACTATATGGTCGATTTTCG+AGG + chr5.2:70742344-70742363 None:intergenic 35.0%
!! ACTATATGGTCGATTTTCGA+GGG + chr5.2:70742343-70742362 None:intergenic 35.0%
!! ATTTGTTGTGGATTTAGCCA+TGG - chr5.2:70742237-70742256 MS.gene76059:intron 35.0%
!! CGTTTCGCTTTTATAAAAGC+GGG - chr5.2:70742459-70742478 MS.gene76059:CDS 35.0%
!! GCTTTTCATGGAAGCTTTAA+AGG - chr5.2:70742645-70742664 MS.gene76059:intron 35.0%
!! GGAGACAATGTTTTGTTCTT+GGG - chr5.2:70742807-70742826 MS.gene76059:intron 35.0%
!! TGGAGACAATGTTTTGTTCT+TGG - chr5.2:70742806-70742825 MS.gene76059:intron 35.0%
ATGCTAAAGCTTGAGAGTCT+TGG - chr5.2:70742786-70742805 MS.gene76059:intron 40.0%
CCGACCTCAGATAAACTATA+TGG + chr5.2:70742357-70742376 None:intergenic 40.0%
CTGAAGATTATGACGAGCAA+AGG + chr5.2:70742985-70743004 None:intergenic 40.0%
GCTATGTCCTCAATTGGATT+TGG + chr5.2:70742627-70742646 None:intergenic 40.0%
GGAACTAGATTGGGCAAATT+TGG - chr5.2:70741984-70742003 MS.gene76059:CDS 40.0%
GGATTTATCGCAGTTGAGTA+TGG + chr5.2:70741588-70741607 None:intergenic 40.0%
GTTCTTGGGATCATTAGCAT+GGG + chr5.2:70742147-70742166 None:intergenic 40.0%
TAAAAGCGGGACAATCATGT+TGG - chr5.2:70742472-70742491 MS.gene76059:CDS 40.0%
TGTGAGTAAAGATCACGGTA+TGG - chr5.2:70742566-70742585 MS.gene76059:intron 40.0%
TGTTCTTGGGATCATTAGCA+TGG + chr5.2:70742148-70742167 None:intergenic 40.0%
TTAATCCTGGTCGTTATCAG+AGG - chr5.2:70742595-70742614 MS.gene76059:intron 40.0%
TTATTGTTGCAAGCCAACCA+TGG + chr5.2:70742257-70742276 None:intergenic 40.0%
TTTGGTAAAACCCAGAAAGG+TGG + chr5.2:70743035-70743054 None:intergenic 40.0%
!!! TTCTGAACCGCTGATTTTGA+TGG + chr5.2:70742113-70742132 None:intergenic 40.0%
AGTCATTAGAGGGAGACTTG+TGG - chr5.2:70742679-70742698 MS.gene76059:intron 45.0%
ATTAGAGGGAGACTTGTGGA+TGG - chr5.2:70742683-70742702 MS.gene76059:intron 45.0%
ATTATGTATGGTTCTCGGGC+TGG - chr5.2:70742496-70742515 MS.gene76059:intron 45.0%
CAATCGCCAATTCTTGCACA+CGG + chr5.2:70742076-70742095 None:intergenic 45.0%
GTTGTGGATTTAGCCATGGT+TGG - chr5.2:70742241-70742260 MS.gene76059:intron 45.0%
TCGAGGGTTGGAAGACTAAT+AGG + chr5.2:70742327-70742346 None:intergenic 45.0%
! CAATTAGCTGCTGTTTGTGC+GGG + chr5.2:70741441-70741460 None:intergenic 45.0%
! CCAATTAGCTGCTGTTTGTG+CGG + chr5.2:70741442-70741461 None:intergenic 45.0%
! GTTATCCTCTGATAACGACC+AGG + chr5.2:70742603-70742622 None:intergenic 45.0%
! TCTCTCATTCGGGTTTCAAG+AGG + chr5.2:70741616-70741635 None:intergenic 45.0%
! TTTATCTGAGGTCGGGTACA+AGG - chr5.2:70742362-70742381 MS.gene76059:CDS 45.0%
!! TATGGTCGATTTTCGAGGGT+TGG + chr5.2:70742339-70742358 None:intergenic 45.0%
!! TAAAAAAAAAATGAAAAATA+TGG + chr5.2:70741834-70741853 None:intergenic 5.0%
AGTTGCTGCCTGTCTAAACG+TGG - chr5.2:70741645-70741664 MS.gene76059:CDS 50.0%
CCGCACAAACAGCAGCTAAT+TGG - chr5.2:70741439-70741458 MS.gene76059:CDS 50.0%
GGTAAAACCCAGAAAGGTGG+TGG + chr5.2:70743032-70743051 None:intergenic 50.0%
TTAGCAGCACACCAACACAG+AGG - chr5.2:70741467-70741486 MS.gene76059:CDS 50.0%
TTGGAATTCGCTGCTGAGAC+CGG - chr5.2:70742750-70742769 MS.gene76059:intron 50.0%
! TTCGGGTTTCAAGAGGCTCA+AGG + chr5.2:70741609-70741628 None:intergenic 50.0%
!! TTGGTGCCGTGTGCAAGAAT+TGG - chr5.2:70742067-70742086 MS.gene76059:CDS 50.0%
! AGCTGCTGTTTGTGCGGGTT+GGG + chr5.2:70741436-70741455 None:intergenic 55.0%
! GGGCTGGCGTCATTCCTTTA+TGG - chr5.2:70742512-70742531 MS.gene76059:intron 55.0%
! TAGCTGCTGTTTGTGCGGGT+TGG + chr5.2:70741437-70741456 None:intergenic 55.0%
AGCAGCAGCCACCACCTTTC+TGG - chr5.2:70743021-70743040 MS.gene76059:CDS 60.0%
GCAGCAGCCACCACCTTTCT+GGG - chr5.2:70743022-70743041 MS.gene76059:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 70741412 70743064 70741412 ID=MS.gene76059
chr5.2 mRNA 70741412 70743064 70741412 ID=MS.gene76059.t1;Parent=MS.gene76059
chr5.2 exon 70742988 70743064 70742988 ID=MS.gene76059.t1.exon1;Parent=MS.gene76059.t1
chr5.2 CDS 70742988 70743064 70742988 ID=cds.MS.gene76059.t1;Parent=MS.gene76059.t1
chr5.2 exon 70742274 70742495 70742274 ID=MS.gene76059.t1.exon2;Parent=MS.gene76059.t1
chr5.2 CDS 70742274 70742495 70742274 ID=cds.MS.gene76059.t1;Parent=MS.gene76059.t1
chr5.2 exon 70741412 70742222 70741412 ID=MS.gene76059.t1.exon3;Parent=MS.gene76059.t1
chr5.2 CDS 70741412 70742222 70741412 ID=cds.MS.gene76059.t1;Parent=MS.gene76059.t1
Gene Sequence

>MS.gene76059

ATGGTGGCTGCAACTCTCGTTCCCAACCCGCACAAACAGCAGCTAATTGGTGCACTTAGCAGCACACCAACACAGAGGTATATGTAAATCTTTTTCTTTTTTTTTTGTCCGTAATGGATGAATAGTTCCACTATGGACAGTTTTATTTTTTTTTTTTTTAAATTGGAAGTTCTCCATACTCAACTGCGATAAATCCTTGAGCCTCTTGAAACCCGAATGAGAGAAAAGTTTTTAGTTGCTGCCTGTCTAAACGTGGATTCAAATAAGAACCTTGGTTGAGTGAAAATCTTTATCTAAGCTAGAAACTTGTGTTGTTTGAATGTCGGTGTAAATTCAGATATTTTTAAAACAAAATCATGATCAAAATTAAGAGGATTCCATAAATTACAAATTATACGAGATCATATATTTAGGGTCGTCCATATTTTTCATTTTTTTTTTACTGAGGGAGGATTCATAAATTCAACATAAAGGGACCAAAACTACAATTAAGCCAATCTTCTATGTATACAATAGCAATAGATATGCTTATATTATCTTATATAGTTCGTTCTTGTTATATTGGTTAGAATGGAACTAGATTGGGCAAATTTGGAAGCACTTGCACTTGATTTAATTCTTGATAAGTTGGAAGAACAAATAGATCACATTTGTTTTGGTGCCGTGTGCAAGAATTGGCGATTGATTGCAAAGCTTAACCATCAAAATCAGCGGTTCAGAAGTCATGTACTACCCATGCTAATGATCCCAAGAACACAAAGATGTTTGTATAGCATTTCAGCCAAGCAAATGTATCCATTTAAATTGCCAAATTCTTATTACCATATTTGTTGTGGATTTAGCCATGGTTGGCTTGCAACAATAAATAAAAGTCACGCCATAACAATATTGCATCCTTTTAAGAATGTTGCTCCTATTAGTCTTCCAACCCTCGAAAATCGACCATATAGTTTATCTGAGGTCGGGTACAAGGTCATTCTTTCTGCTGATCCTATAACAAGACCAAATGATTATATGGTTGTTGCAAGTCACACTAACATTTATGGACGTTTCGCTTTTATAAAAGCGGGACAATCATGTTGGAATTATGTATGGTTCTCGGGCTGGCGTCATTCCTTTATGGATTTTATGTTCTATGGAGGTTTAGTTTATGCTGTGAGTAAAGATCACGGTATGGTATCTTTTAATCCTGGTCGTTATCAGAGGATAACTCCAAATCCAATTGAGGACATAGCTTTTCATGGAAGCTTTAAAGGTTATCTTGTGAAGTCATTAGAGGGAGACTTGTGGATGGTGAAAAGATTTTTTACTTTTAAGGGTGATTTTCAAGTGTACAAGTTGGAATTCGCTGCTGAGACCGGAAAGTTTAAACAAATGCTAAAGCTTGAGAGTCTTGGAGACAATGTTTTGTTCTTGGGAGACACTGATTCAATTTCTGTATCAGCTTCATACTTCTTCGGTTGTCTGAAAAAAGATTCAATTTATTACACAGAAGGAATTAATGCAAACAAGTTAGATTGTGCAACTTGTGGTCCATTTCATATAGGGATATATAATGTAAGGGATGGAACCTTTGCTCGTCATAATCTTCAGAATCATTTCTTCAATAAGCAGCAGCCACCACCTTTCTGGGTTTTACCAAATTTCCAATGA
Protein sequence

>MS.gene76059.t1

MVAATLVPNPHKQQLIGALSSTPTQRMELDWANLEALALDLILDKLEEQIDHICFGAVCKNWRLIAKLNHQNQRFRSHVLPMLMIPRTQRCLYSISAKQIHGWLATINKSHAITILHPFKNVAPISLPTLENRPYSLSEVGYKVILSADPITRPNDYMVVASHTNIYGRFAFIKAGQSCWNYVWFSGWRHSFMDFMFYGGLVYAVSKDHGMVSFNPGRYQRITPNPIEDIAFHGSFKGYLVKSLEGDLWMVKRFFTFKGDFQVYKLEFAAETGKFKQMLKLESLGDNVLFLGDTDSISVSASYFFGCLKKDSIYYTEGINANKLDCATCGPFHIGIYNVRDGTFARHNLQNHFFNKQQPPPFWVLPNFQ