Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066291.t1 | XP_003613576.1 | 92.7 | 381 | 27 | 1 | 1 | 380 | 3 | 383 | 5.90E-215 | 756.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066291.t1 | G7K9R3 | 92.7 | 381 | 27 | 1 | 1 | 380 | 3 | 383 | 4.2e-215 | 756.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066291.t1 | MTR_5g038260 | 92.651 | 381 | 27 | 1 | 1 | 380 | 3 | 383 | 0.0 | 735 |
MS.gene066291.t1 | MTR_5g038230 | 85.000 | 380 | 32 | 2 | 1 | 380 | 1 | 355 | 0.0 | 657 |
MS.gene066291.t1 | MTR_1g064570 | 49.380 | 403 | 178 | 8 | 1 | 380 | 1 | 400 | 1.40e-128 | 375 |
MS.gene066291.t1 | MTR_1g108740 | 44.648 | 383 | 165 | 11 | 2 | 378 | 3 | 344 | 7.64e-96 | 290 |
MS.gene066291.t1 | MTR_5g082770 | 50.327 | 306 | 132 | 10 | 1 | 303 | 1 | 289 | 3.66e-84 | 258 |
MS.gene066291.t1 | MTR_7g077620 | 42.935 | 368 | 167 | 13 | 4 | 353 | 5 | 347 | 3.05e-78 | 246 |
MS.gene066291.t1 | MTR_7g077660 | 41.814 | 397 | 178 | 16 | 4 | 380 | 5 | 368 | 8.92e-77 | 241 |
MS.gene066291.t1 | MTR_7g077650 | 40.000 | 405 | 178 | 18 | 4 | 380 | 5 | 372 | 1.65e-72 | 231 |
MS.gene066291.t1 | MTR_5g082780 | 44.048 | 252 | 120 | 7 | 103 | 351 | 1 | 234 | 3.24e-53 | 176 |
MS.gene066291.t1 | MTR_7g076110 | 37.658 | 316 | 162 | 13 | 77 | 380 | 21 | 313 | 1.75e-45 | 159 |
MS.gene066291.t1 | MTR_1g016150 | 45.503 | 189 | 78 | 8 | 2 | 177 | 3 | 179 | 1.22e-42 | 149 |
MS.gene066291.t1 | MTR_1g016150 | 55.072 | 69 | 24 | 1 | 248 | 316 | 175 | 236 | 7.21e-14 | 70.9 |
MS.gene066291.t1 | MTR_7g076100 | 39.526 | 253 | 121 | 10 | 139 | 380 | 69 | 300 | 1.49e-36 | 135 |
MS.gene066291.t1 | MTR_7g076100 | 60.000 | 50 | 19 | 1 | 4 | 53 | 6 | 54 | 7.71e-12 | 65.9 |
MS.gene066291.t1 | MTR_1g108750 | 44.304 | 158 | 53 | 4 | 1 | 157 | 1 | 124 | 1.20e-25 | 100 |
MS.gene066291.t1 | MTR_6g023955 | 50.442 | 113 | 48 | 3 | 112 | 217 | 40 | 151 | 1.44e-25 | 103 |
MS.gene066291.t1 | MTR_6g023955 | 57.377 | 61 | 26 | 0 | 319 | 379 | 149 | 209 | 1.40e-18 | 84.0 |
MS.gene066291.t1 | MTR_3g114970 | 25.831 | 391 | 235 | 15 | 1 | 375 | 1 | 352 | 9.75e-20 | 89.7 |
MS.gene066291.t1 | MTR_3g114990 | 26.442 | 416 | 237 | 17 | 1 | 375 | 20 | 407 | 1.42e-18 | 87.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 81 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATTATATTGCTCCTAAAT+TGG | 0.217987 | 5.3:-26423144 | None:intergenic |
TGGTGAGAAGGTTTATAAAT+AGG | 0.247820 | 5.3:+26423758 | MS.gene066291:CDS |
GGTGATCATGTTGATGATTA+AGG | 0.258043 | 5.3:-26423123 | None:intergenic |
ATACAAGACACTGACCATTT+TGG | 0.281472 | 5.3:+26423538 | MS.gene066291:CDS |
TAAAAGCAGGACAAGAGTTT+TGG | 0.281524 | 5.3:+26423509 | MS.gene066291:CDS |
ATCAACATGATCACCAATTT+AGG | 0.300778 | 5.3:+26423131 | MS.gene066291:CDS |
CTTCTTTGTAACAAAACATT+TGG | 0.301077 | 5.3:-26423673 | None:intergenic |
TAATCACCTGGACTTGTTAT+AGG | 0.301376 | 5.3:-26423442 | None:intergenic |
TTGTTATTCAAGTGACCCTT+GGG | 0.317511 | 5.3:+26423636 | MS.gene066291:CDS |
TTAAGCATTGTCAATTCTAA+TGG | 0.317587 | 5.3:-26423241 | None:intergenic |
ATAGGAGCAACATCCTTAAA+AGG | 0.318392 | 5.3:-26423340 | None:intergenic |
GCCACCCATCGATAATTATA+TGG | 0.334313 | 5.3:+26423369 | MS.gene066291:CDS |
TTGTCGATACTTGAGAGTTT+AGG | 0.343590 | 5.3:+26423862 | MS.gene066291:CDS |
TTGAACCAATTGATCACATT+TGG | 0.344806 | 5.3:+26423062 | MS.gene066291:CDS |
CCAATTGATCACATTTGGTT+TGG | 0.352054 | 5.3:+26423067 | MS.gene066291:CDS |
TTCTTTACATGTATTTAAGT+TGG | 0.365055 | 5.3:+26423807 | MS.gene066291:CDS |
TCGATGGGTGGCAAACTAAT+AGG | 0.371653 | 5.3:-26423358 | None:intergenic |
GCATAGCCATGGAGCGAGAT+TGG | 0.373158 | 5.3:+26422993 | None:intergenic |
AATGGATACACTCTATTTGC+TGG | 0.375390 | 5.3:-26423223 | None:intergenic |
CCCTTGAAGTAAGGTTTGTA+AGG | 0.376047 | 5.3:-26424075 | None:intergenic |
CCCTTACAAACCTTACTTCA+AGG | 0.383312 | 5.3:+26424074 | MS.gene066291:CDS |
CCAAACCAAATGTGATCAAT+TGG | 0.396537 | 5.3:-26423067 | None:intergenic |
GGTGAGAAGGTTTATAAATA+GGG | 0.399787 | 5.3:+26423759 | MS.gene066291:CDS |
TACTTATTTAGTGAAATCAT+TGG | 0.416138 | 5.3:+26423720 | MS.gene066291:CDS |
CATTACATTCTACAATGGTT+TGG | 0.419262 | 5.3:+26423570 | MS.gene066291:CDS |
TAATGTCGATGAAACCAAAA+TGG | 0.420892 | 5.3:-26423552 | None:intergenic |
AACGTAAAACATGGAAGCTT+GGG | 0.422361 | 5.3:+26424042 | MS.gene066291:CDS |
AAAAGGTGGCACAACCCATA+TGG | 0.433261 | 5.3:-26424109 | None:intergenic |
AGGGTATGACACCTCCCATA+TGG | 0.446486 | 5.3:+26424094 | MS.gene066291:CDS |
CATAGCCATGGAGCGAGATT+GGG | 0.453674 | 5.3:+26422994 | None:intergenic |
TCTAATCAATTCCACTGAAA+AGG | 0.457215 | 5.3:-26424126 | None:intergenic |
TAACGTAAAACATGGAAGCT+TGG | 0.463159 | 5.3:+26424041 | MS.gene066291:CDS |
GAGAGTTGTGGATGGTGAGA+AGG | 0.464771 | 5.3:+26423746 | MS.gene066291:CDS |
TTACGACTTCAATGTGCATA+AGG | 0.467976 | 5.3:+26423402 | MS.gene066291:CDS |
GGTGTCATACCCTTGAAGTA+AGG | 0.468768 | 5.3:-26424084 | None:intergenic |
TCAAAAGGACCTCTAGGATA+AGG | 0.471573 | 5.3:-26424006 | None:intergenic |
TTTGTTATTCAAGTGACCCT+TGG | 0.473541 | 5.3:+26423635 | MS.gene066291:CDS |
CCTTACAAACCTTACTTCAA+GGG | 0.500600 | 5.3:+26424075 | MS.gene066291:CDS |
TTATATATTCCCATATCAAA+AGG | 0.509410 | 5.3:-26424021 | None:intergenic |
TTCAAGTGACCCTTGGGGTG+AGG | 0.511989 | 5.3:+26423642 | MS.gene066291:CDS |
TTTCTGGACTCTTCTCTGAA+GGG | 0.527378 | 5.3:-26423180 | None:intergenic |
GGGTATGACACCTCCCATAT+GGG | 0.531392 | 5.3:+26424095 | MS.gene066291:CDS |
CTTAACAACAAGAGATGTTG+TGG | 0.537010 | 5.3:+26423259 | MS.gene066291:CDS |
GATTTCACTAAATAAGTAAG+TGG | 0.538843 | 5.3:-26423715 | None:intergenic |
AAAGGTGGCACAACCCATAT+GGG | 0.541900 | 5.3:-26424108 | None:intergenic |
TGTCTAGCTTTCATAAAAGC+AGG | 0.542520 | 5.3:+26423496 | MS.gene066291:CDS |
ACGTACCATATAATTATCGA+TGG | 0.547777 | 5.3:-26423374 | None:intergenic |
TATTTAGTGAAATCATTGGA+GGG | 0.549492 | 5.3:+26423724 | MS.gene066291:CDS |
AAGTTGGAATTGAATGACAA+AGG | 0.553747 | 5.3:+26423823 | MS.gene066291:CDS |
CCTTGAAGTAAGGTTTGTAA+GGG | 0.554707 | 5.3:-26424074 | None:intergenic |
TATGAAAGCTAGACAGCCAC+GGG | 0.557625 | 5.3:-26423488 | None:intergenic |
CCCATATCAAAAGGACCTCT+AGG | 0.561580 | 5.3:-26424012 | None:intergenic |
GTTGATCCTATAACAAGTCC+AGG | 0.562985 | 5.3:+26423436 | MS.gene066291:CDS |
TTATTTAGTGAAATCATTGG+AGG | 0.564804 | 5.3:+26423723 | MS.gene066291:CDS |
AACAAGTCCAGGTGATTATG+TGG | 0.565290 | 5.3:+26423447 | MS.gene066291:CDS |
GGAATTCTTTCCTCACCCCA+AGG | 0.565481 | 5.3:-26423652 | None:intergenic |
ACGAAGAAGATGTCATCACT+TGG | 0.566470 | 5.3:+26423311 | MS.gene066291:CDS |
TAATTATTATAATGAAGTAC+CGG | 0.574818 | 5.3:+26423981 | MS.gene066291:CDS |
GGACCTCTAGGATAAGGAAC+CGG | 0.579650 | 5.3:-26424000 | None:intergenic |
AATCAATTCCACTGAAAAGG+TGG | 0.581608 | 5.3:-26424123 | None:intergenic |
ATCGACATTACATTCTACAA+TGG | 0.582494 | 5.3:+26423565 | MS.gene066291:CDS |
GAATTCTTTCCTCACCCCAA+GGG | 0.583805 | 5.3:-26423651 | None:intergenic |
GTTTGCCCAATCTCGCTCCA+TGG | 0.583904 | 5.3:-26422999 | None:intergenic |
TTATGAAAGCTAGACAGCCA+CGG | 0.592955 | 5.3:-26423489 | None:intergenic |
GTTGTGGATCAAGTCATGGC+TGG | 0.604230 | 5.3:+26423275 | MS.gene066291:CDS |
TGGTGTATGCCGTAACTCGT+TGG | 0.604557 | 5.3:+26423590 | MS.gene066291:CDS |
AATCATTGGAGGGAGAGTTG+TGG | 0.606251 | 5.3:+26423734 | MS.gene066291:CDS |
GGAATATATAACGTAAAACA+TGG | 0.617818 | 5.3:+26424033 | MS.gene066291:CDS |
TCTGAAGGGATCATTAGCAT+AGG | 0.622050 | 5.3:-26423166 | None:intergenic |
CGAAGAAGATGTCATCACTT+GGG | 0.623448 | 5.3:+26423312 | MS.gene066291:CDS |
ACCATATAATTATCGATGGG+TGG | 0.627867 | 5.3:-26423370 | None:intergenic |
GCTGCAACCACATAATCACC+TGG | 0.630262 | 5.3:-26423454 | None:intergenic |
CGTACCATATAATTATCGAT+GGG | 0.639191 | 5.3:-26423373 | None:intergenic |
GCAGCAATTTACACTACCCG+TGG | 0.645826 | 5.3:+26423472 | MS.gene066291:CDS |
AGATGTTGTGGATCAAGTCA+TGG | 0.649193 | 5.3:+26423271 | MS.gene066291:CDS |
GTACCGGTTCCTTATCCTAG+AGG | 0.650762 | 5.3:+26423997 | MS.gene066291:CDS |
AGGGTCAACAATATCAACAA+AGG | 0.663310 | 5.3:+26423778 | MS.gene066291:CDS |
TGTTATTCAAGTGACCCTTG+GGG | 0.675329 | 5.3:+26423637 | MS.gene066291:CDS |
ATTGGAGGGAGAGTTGTGGA+TGG | 0.690403 | 5.3:+26423738 | MS.gene066291:CDS |
GGTGGCACAACCCATATGGG+AGG | 0.700789 | 5.3:-26424105 | None:intergenic |
TGTTATAGGATCAACTGACA+AGG | 0.708968 | 5.3:-26423428 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTATTATAATGAAGTAC+CGG | + | chr5.3:26423981-26424000 | MS.gene066291:CDS | 15.0% |
!! | TACTTATTTAGTGAAATCAT+TGG | + | chr5.3:26423720-26423739 | MS.gene066291:CDS | 20.0% |
!! | TTATATATTCCCATATCAAA+AGG | - | chr5.3:26424024-26424043 | None:intergenic | 20.0% |
!! | TTCTTTACATGTATTTAAGT+TGG | + | chr5.3:26423807-26423826 | MS.gene066291:CDS | 20.0% |
! | CTTCTTTGTAACAAAACATT+TGG | - | chr5.3:26423676-26423695 | None:intergenic | 25.0% |
! | GATTTCACTAAATAAGTAAG+TGG | - | chr5.3:26423718-26423737 | None:intergenic | 25.0% |
! | GGAATATATAACGTAAAACA+TGG | + | chr5.3:26424033-26424052 | MS.gene066291:CDS | 25.0% |
! | TATTTAGTGAAATCATTGGA+GGG | + | chr5.3:26423724-26423743 | MS.gene066291:CDS | 25.0% |
! | TTATTTAGTGAAATCATTGG+AGG | + | chr5.3:26423723-26423742 | MS.gene066291:CDS | 25.0% |
!! | TTAAGCATTGTCAATTCTAA+TGG | - | chr5.3:26423244-26423263 | None:intergenic | 25.0% |
!!! | AATTTTTTTCCAACGAGTTA+CGG | - | chr5.3:26423602-26423621 | None:intergenic | 25.0% |
AAGTTGGAATTGAATGACAA+AGG | + | chr5.3:26423823-26423842 | MS.gene066291:CDS | 30.0% | |
ACGTACCATATAATTATCGA+TGG | - | chr5.3:26423377-26423396 | None:intergenic | 30.0% | |
ATCAACATGATCACCAATTT+AGG | + | chr5.3:26423131-26423150 | MS.gene066291:CDS | 30.0% | |
ATCGACATTACATTCTACAA+TGG | + | chr5.3:26423565-26423584 | MS.gene066291:CDS | 30.0% | |
CATTACATTCTACAATGGTT+TGG | + | chr5.3:26423570-26423589 | MS.gene066291:CDS | 30.0% | |
CGTACCATATAATTATCGAT+GGG | - | chr5.3:26423376-26423395 | None:intergenic | 30.0% | |
GCATTATATTGCTCCTAAAT+TGG | - | chr5.3:26423147-26423166 | None:intergenic | 30.0% | |
GGTGAGAAGGTTTATAAATA+GGG | + | chr5.3:26423759-26423778 | MS.gene066291:CDS | 30.0% | |
TAATGTCGATGAAACCAAAA+TGG | - | chr5.3:26423555-26423574 | None:intergenic | 30.0% | |
TGGTGAGAAGGTTTATAAAT+AGG | + | chr5.3:26423758-26423777 | MS.gene066291:CDS | 30.0% | |
TTGAACCAATTGATCACATT+TGG | + | chr5.3:26423062-26423081 | MS.gene066291:CDS | 30.0% | |
AACGTAAAACATGGAAGCTT+GGG | + | chr5.3:26424042-26424061 | MS.gene066291:CDS | 35.0% | |
AATGGATACACTCTATTTGC+TGG | - | chr5.3:26423226-26423245 | None:intergenic | 35.0% | |
ACCATATAATTATCGATGGG+TGG | - | chr5.3:26423373-26423392 | None:intergenic | 35.0% | |
AGGGTCAACAATATCAACAA+AGG | + | chr5.3:26423778-26423797 | MS.gene066291:CDS | 35.0% | |
ATAGGAGCAACATCCTTAAA+AGG | - | chr5.3:26423343-26423362 | None:intergenic | 35.0% | |
CCAAACCAAATGTGATCAAT+TGG | - | chr5.3:26423070-26423089 | None:intergenic | 35.0% | |
CCAATTGATCACATTTGGTT+TGG | + | chr5.3:26423067-26423086 | MS.gene066291:CDS | 35.0% | |
CCTTACAAACCTTACTTCAA+GGG | + | chr5.3:26424075-26424094 | MS.gene066291:CDS | 35.0% | |
CCTTGAAGTAAGGTTTGTAA+GGG | - | chr5.3:26424077-26424096 | None:intergenic | 35.0% | |
CTTAACAACAAGAGATGTTG+TGG | + | chr5.3:26423259-26423278 | MS.gene066291:CDS | 35.0% | |
TAACGTAAAACATGGAAGCT+TGG | + | chr5.3:26424041-26424060 | MS.gene066291:CDS | 35.0% | |
TGTTATAGGATCAACTGACA+AGG | - | chr5.3:26423431-26423450 | None:intergenic | 35.0% | |
TTACGACTTCAATGTGCATA+AGG | + | chr5.3:26423402-26423421 | MS.gene066291:CDS | 35.0% | |
TTGGTTTCGTCTGCAAAAAT+TGG | + | chr5.3:26423086-26423105 | MS.gene066291:CDS | 35.0% | |
TTGTCGATACTTGAGAGTTT+AGG | + | chr5.3:26423862-26423881 | MS.gene066291:CDS | 35.0% | |
! | ATACAAGACACTGACCATTT+TGG | + | chr5.3:26423538-26423557 | MS.gene066291:CDS | 35.0% |
! | TAAAAGCAGGACAAGAGTTT+TGG | + | chr5.3:26423509-26423528 | MS.gene066291:CDS | 35.0% |
! | TTGTTATTCAAGTGACCCTT+GGG | + | chr5.3:26423636-26423655 | MS.gene066291:CDS | 35.0% |
!! | CTAAACAAACATCGCTTTTC+TGG | - | chr5.3:26423199-26423218 | None:intergenic | 35.0% |
!! | GGTGATCATGTTGATGATTA+AGG | - | chr5.3:26423126-26423145 | None:intergenic | 35.0% |
!! | TAATCACCTGGACTTGTTAT+AGG | - | chr5.3:26423445-26423464 | None:intergenic | 35.0% |
!! | TGTCTAGCTTTCATAAAAGC+AGG | + | chr5.3:26423496-26423515 | MS.gene066291:CDS | 35.0% |
!! | TTTGTTATTCAAGTGACCCT+TGG | + | chr5.3:26423635-26423654 | MS.gene066291:CDS | 35.0% |
!!! | AATGTTTTGTTTGTGGGTGA+TGG | + | chr5.3:26423889-26423908 | MS.gene066291:CDS | 35.0% |
!!! | AGGAGACAATGTTTTGTTTG+TGG | + | chr5.3:26423882-26423901 | MS.gene066291:CDS | 35.0% |
!!! | GGAGACAATGTTTTGTTTGT+GGG | + | chr5.3:26423883-26423902 | MS.gene066291:CDS | 35.0% |
AACAAGTCCAGGTGATTATG+TGG | + | chr5.3:26423447-26423466 | MS.gene066291:CDS | 40.0% | |
ACGAAGAAGATGTCATCACT+TGG | + | chr5.3:26423311-26423330 | MS.gene066291:CDS | 40.0% | |
AGATGTTGTGGATCAAGTCA+TGG | + | chr5.3:26423271-26423290 | MS.gene066291:CDS | 40.0% | |
CCCTTACAAACCTTACTTCA+AGG | + | chr5.3:26424074-26424093 | MS.gene066291:CDS | 40.0% | |
CCCTTGAAGTAAGGTTTGTA+AGG | - | chr5.3:26424078-26424097 | None:intergenic | 40.0% | |
CGAAGAAGATGTCATCACTT+GGG | + | chr5.3:26423312-26423331 | MS.gene066291:CDS | 40.0% | |
GCCACCCATCGATAATTATA+TGG | + | chr5.3:26423369-26423388 | MS.gene066291:CDS | 40.0% | |
GTTGATCCTATAACAAGTCC+AGG | + | chr5.3:26423436-26423455 | MS.gene066291:CDS | 40.0% | |
TCTGAAGGGATCATTAGCAT+AGG | - | chr5.3:26423169-26423188 | None:intergenic | 40.0% | |
TGTTATTCAAGTGACCCTTG+GGG | + | chr5.3:26423637-26423656 | MS.gene066291:CDS | 40.0% | |
TTATGAAAGCTAGACAGCCA+CGG | - | chr5.3:26423492-26423511 | None:intergenic | 40.0% | |
TTTCTGGACTCTTCTCTGAA+GGG | - | chr5.3:26423183-26423202 | None:intergenic | 40.0% | |
! | CACTTGGGAGAATCCTTTTA+AGG | + | chr5.3:26423327-26423346 | MS.gene066291:CDS | 40.0% |
! | CCTAGAGGTCCTTTTGATAT+GGG | + | chr5.3:26424012-26424031 | MS.gene066291:CDS | 40.0% |
! | TCCTAGAGGTCCTTTTGATA+TGG | + | chr5.3:26424011-26424030 | MS.gene066291:CDS | 40.0% |
! | TTTTCTGGACTCTTCTCTGA+AGG | - | chr5.3:26423184-26423203 | None:intergenic | 40.0% |
!! | TCAAAAGGACCTCTAGGATA+AGG | - | chr5.3:26424009-26424028 | None:intergenic | 40.0% |
AAAAGGTGGCACAACCCATA+TGG | - | chr5.3:26424112-26424131 | None:intergenic | 45.0% | |
AAAGGTGGCACAACCCATAT+GGG | - | chr5.3:26424111-26424130 | None:intergenic | 45.0% | |
AATCATTGGAGGGAGAGTTG+TGG | + | chr5.3:26423734-26423753 | MS.gene066291:CDS | 45.0% | |
CCCATATCAAAAGGACCTCT+AGG | - | chr5.3:26424015-26424034 | None:intergenic | 45.0% | |
GAATTCTTTCCTCACCCCAA+GGG | - | chr5.3:26423654-26423673 | None:intergenic | 45.0% | |
TATGAAAGCTAGACAGCCAC+GGG | - | chr5.3:26423491-26423510 | None:intergenic | 45.0% | |
TCGATGGGTGGCAAACTAAT+AGG | - | chr5.3:26423361-26423380 | None:intergenic | 45.0% | |
! | GGTGTCATACCCTTGAAGTA+AGG | - | chr5.3:26424087-26424106 | None:intergenic | 45.0% |
AGGGTATGACACCTCCCATA+TGG | + | chr5.3:26424094-26424113 | MS.gene066291:CDS | 50.0% | |
ATTGGAGGGAGAGTTGTGGA+TGG | + | chr5.3:26423738-26423757 | MS.gene066291:CDS | 50.0% | |
GAGAGTTGTGGATGGTGAGA+AGG | + | chr5.3:26423746-26423765 | MS.gene066291:CDS | 50.0% | |
GCAGCAATTTACACTACCCG+TGG | + | chr5.3:26423472-26423491 | MS.gene066291:CDS | 50.0% | |
GCTGCAACCACATAATCACC+TGG | - | chr5.3:26423457-26423476 | None:intergenic | 50.0% | |
GGAATTCTTTCCTCACCCCA+AGG | - | chr5.3:26423655-26423674 | None:intergenic | 50.0% | |
GGGTATGACACCTCCCATAT+GGG | + | chr5.3:26424095-26424114 | MS.gene066291:CDS | 50.0% | |
GTTGTGGATCAAGTCATGGC+TGG | + | chr5.3:26423275-26423294 | MS.gene066291:CDS | 50.0% | |
TGGTGTATGCCGTAACTCGT+TGG | + | chr5.3:26423590-26423609 | MS.gene066291:CDS | 50.0% | |
!! | GGACCTCTAGGATAAGGAAC+CGG | - | chr5.3:26424003-26424022 | None:intergenic | 50.0% |
!! | GTACCGGTTCCTTATCCTAG+AGG | + | chr5.3:26423997-26424016 | MS.gene066291:CDS | 50.0% |
TTCAAGTGACCCTTGGGGTG+AGG | + | chr5.3:26423642-26423661 | MS.gene066291:CDS | 55.0% | |
! | GGGTTGTGCCACCTTTTCAG+TGG | + | chr5.3:26424115-26424134 | MS.gene066291:CDS | 55.0% |
GGTGGCACAACCCATATGGG+AGG | - | chr5.3:26424108-26424127 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 26423001 | 26424143 | 26423001 | ID=MS.gene066291 |
chr5.3 | mRNA | 26423001 | 26424143 | 26423001 | ID=MS.gene066291.t1;Parent=MS.gene066291 |
chr5.3 | exon | 26423001 | 26424143 | 26423001 | ID=MS.gene066291.t1.exon1;Parent=MS.gene066291.t1 |
chr5.3 | CDS | 26423001 | 26424143 | 26423001 | ID=cds.MS.gene066291.t1;Parent=MS.gene066291.t1 |
Gene Sequence |
Protein sequence |