Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066291.t1 | XP_003613576.1 | 92.7 | 381 | 27 | 1 | 1 | 380 | 3 | 383 | 5.90E-215 | 756.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066291.t1 | G7K9R3 | 92.7 | 381 | 27 | 1 | 1 | 380 | 3 | 383 | 4.2e-215 | 756.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066291.t1 | MTR_5g038260 | 92.651 | 381 | 27 | 1 | 1 | 380 | 3 | 383 | 0.0 | 735 |
| MS.gene066291.t1 | MTR_5g038230 | 85.000 | 380 | 32 | 2 | 1 | 380 | 1 | 355 | 0.0 | 657 |
| MS.gene066291.t1 | MTR_1g064570 | 49.380 | 403 | 178 | 8 | 1 | 380 | 1 | 400 | 1.40e-128 | 375 |
| MS.gene066291.t1 | MTR_1g108740 | 44.648 | 383 | 165 | 11 | 2 | 378 | 3 | 344 | 7.64e-96 | 290 |
| MS.gene066291.t1 | MTR_5g082770 | 50.327 | 306 | 132 | 10 | 1 | 303 | 1 | 289 | 3.66e-84 | 258 |
| MS.gene066291.t1 | MTR_7g077620 | 42.935 | 368 | 167 | 13 | 4 | 353 | 5 | 347 | 3.05e-78 | 246 |
| MS.gene066291.t1 | MTR_7g077660 | 41.814 | 397 | 178 | 16 | 4 | 380 | 5 | 368 | 8.92e-77 | 241 |
| MS.gene066291.t1 | MTR_7g077650 | 40.000 | 405 | 178 | 18 | 4 | 380 | 5 | 372 | 1.65e-72 | 231 |
| MS.gene066291.t1 | MTR_5g082780 | 44.048 | 252 | 120 | 7 | 103 | 351 | 1 | 234 | 3.24e-53 | 176 |
| MS.gene066291.t1 | MTR_7g076110 | 37.658 | 316 | 162 | 13 | 77 | 380 | 21 | 313 | 1.75e-45 | 159 |
| MS.gene066291.t1 | MTR_1g016150 | 45.503 | 189 | 78 | 8 | 2 | 177 | 3 | 179 | 1.22e-42 | 149 |
| MS.gene066291.t1 | MTR_1g016150 | 55.072 | 69 | 24 | 1 | 248 | 316 | 175 | 236 | 7.21e-14 | 70.9 |
| MS.gene066291.t1 | MTR_7g076100 | 39.526 | 253 | 121 | 10 | 139 | 380 | 69 | 300 | 1.49e-36 | 135 |
| MS.gene066291.t1 | MTR_7g076100 | 60.000 | 50 | 19 | 1 | 4 | 53 | 6 | 54 | 7.71e-12 | 65.9 |
| MS.gene066291.t1 | MTR_1g108750 | 44.304 | 158 | 53 | 4 | 1 | 157 | 1 | 124 | 1.20e-25 | 100 |
| MS.gene066291.t1 | MTR_6g023955 | 50.442 | 113 | 48 | 3 | 112 | 217 | 40 | 151 | 1.44e-25 | 103 |
| MS.gene066291.t1 | MTR_6g023955 | 57.377 | 61 | 26 | 0 | 319 | 379 | 149 | 209 | 1.40e-18 | 84.0 |
| MS.gene066291.t1 | MTR_3g114970 | 25.831 | 391 | 235 | 15 | 1 | 375 | 1 | 352 | 9.75e-20 | 89.7 |
| MS.gene066291.t1 | MTR_3g114990 | 26.442 | 416 | 237 | 17 | 1 | 375 | 20 | 407 | 1.42e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 81 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTATATTGCTCCTAAAT+TGG | 0.217987 | 5.3:-26423144 | None:intergenic |
| TGGTGAGAAGGTTTATAAAT+AGG | 0.247820 | 5.3:+26423758 | MS.gene066291:CDS |
| GGTGATCATGTTGATGATTA+AGG | 0.258043 | 5.3:-26423123 | None:intergenic |
| ATACAAGACACTGACCATTT+TGG | 0.281472 | 5.3:+26423538 | MS.gene066291:CDS |
| TAAAAGCAGGACAAGAGTTT+TGG | 0.281524 | 5.3:+26423509 | MS.gene066291:CDS |
| ATCAACATGATCACCAATTT+AGG | 0.300778 | 5.3:+26423131 | MS.gene066291:CDS |
| CTTCTTTGTAACAAAACATT+TGG | 0.301077 | 5.3:-26423673 | None:intergenic |
| TAATCACCTGGACTTGTTAT+AGG | 0.301376 | 5.3:-26423442 | None:intergenic |
| TTGTTATTCAAGTGACCCTT+GGG | 0.317511 | 5.3:+26423636 | MS.gene066291:CDS |
| TTAAGCATTGTCAATTCTAA+TGG | 0.317587 | 5.3:-26423241 | None:intergenic |
| ATAGGAGCAACATCCTTAAA+AGG | 0.318392 | 5.3:-26423340 | None:intergenic |
| GCCACCCATCGATAATTATA+TGG | 0.334313 | 5.3:+26423369 | MS.gene066291:CDS |
| TTGTCGATACTTGAGAGTTT+AGG | 0.343590 | 5.3:+26423862 | MS.gene066291:CDS |
| TTGAACCAATTGATCACATT+TGG | 0.344806 | 5.3:+26423062 | MS.gene066291:CDS |
| CCAATTGATCACATTTGGTT+TGG | 0.352054 | 5.3:+26423067 | MS.gene066291:CDS |
| TTCTTTACATGTATTTAAGT+TGG | 0.365055 | 5.3:+26423807 | MS.gene066291:CDS |
| TCGATGGGTGGCAAACTAAT+AGG | 0.371653 | 5.3:-26423358 | None:intergenic |
| GCATAGCCATGGAGCGAGAT+TGG | 0.373158 | 5.3:+26422993 | None:intergenic |
| AATGGATACACTCTATTTGC+TGG | 0.375390 | 5.3:-26423223 | None:intergenic |
| CCCTTGAAGTAAGGTTTGTA+AGG | 0.376047 | 5.3:-26424075 | None:intergenic |
| CCCTTACAAACCTTACTTCA+AGG | 0.383312 | 5.3:+26424074 | MS.gene066291:CDS |
| CCAAACCAAATGTGATCAAT+TGG | 0.396537 | 5.3:-26423067 | None:intergenic |
| GGTGAGAAGGTTTATAAATA+GGG | 0.399787 | 5.3:+26423759 | MS.gene066291:CDS |
| TACTTATTTAGTGAAATCAT+TGG | 0.416138 | 5.3:+26423720 | MS.gene066291:CDS |
| CATTACATTCTACAATGGTT+TGG | 0.419262 | 5.3:+26423570 | MS.gene066291:CDS |
| TAATGTCGATGAAACCAAAA+TGG | 0.420892 | 5.3:-26423552 | None:intergenic |
| AACGTAAAACATGGAAGCTT+GGG | 0.422361 | 5.3:+26424042 | MS.gene066291:CDS |
| AAAAGGTGGCACAACCCATA+TGG | 0.433261 | 5.3:-26424109 | None:intergenic |
| AGGGTATGACACCTCCCATA+TGG | 0.446486 | 5.3:+26424094 | MS.gene066291:CDS |
| CATAGCCATGGAGCGAGATT+GGG | 0.453674 | 5.3:+26422994 | None:intergenic |
| TCTAATCAATTCCACTGAAA+AGG | 0.457215 | 5.3:-26424126 | None:intergenic |
| TAACGTAAAACATGGAAGCT+TGG | 0.463159 | 5.3:+26424041 | MS.gene066291:CDS |
| GAGAGTTGTGGATGGTGAGA+AGG | 0.464771 | 5.3:+26423746 | MS.gene066291:CDS |
| TTACGACTTCAATGTGCATA+AGG | 0.467976 | 5.3:+26423402 | MS.gene066291:CDS |
| GGTGTCATACCCTTGAAGTA+AGG | 0.468768 | 5.3:-26424084 | None:intergenic |
| TCAAAAGGACCTCTAGGATA+AGG | 0.471573 | 5.3:-26424006 | None:intergenic |
| TTTGTTATTCAAGTGACCCT+TGG | 0.473541 | 5.3:+26423635 | MS.gene066291:CDS |
| CCTTACAAACCTTACTTCAA+GGG | 0.500600 | 5.3:+26424075 | MS.gene066291:CDS |
| TTATATATTCCCATATCAAA+AGG | 0.509410 | 5.3:-26424021 | None:intergenic |
| TTCAAGTGACCCTTGGGGTG+AGG | 0.511989 | 5.3:+26423642 | MS.gene066291:CDS |
| TTTCTGGACTCTTCTCTGAA+GGG | 0.527378 | 5.3:-26423180 | None:intergenic |
| GGGTATGACACCTCCCATAT+GGG | 0.531392 | 5.3:+26424095 | MS.gene066291:CDS |
| CTTAACAACAAGAGATGTTG+TGG | 0.537010 | 5.3:+26423259 | MS.gene066291:CDS |
| GATTTCACTAAATAAGTAAG+TGG | 0.538843 | 5.3:-26423715 | None:intergenic |
| AAAGGTGGCACAACCCATAT+GGG | 0.541900 | 5.3:-26424108 | None:intergenic |
| TGTCTAGCTTTCATAAAAGC+AGG | 0.542520 | 5.3:+26423496 | MS.gene066291:CDS |
| ACGTACCATATAATTATCGA+TGG | 0.547777 | 5.3:-26423374 | None:intergenic |
| TATTTAGTGAAATCATTGGA+GGG | 0.549492 | 5.3:+26423724 | MS.gene066291:CDS |
| AAGTTGGAATTGAATGACAA+AGG | 0.553747 | 5.3:+26423823 | MS.gene066291:CDS |
| CCTTGAAGTAAGGTTTGTAA+GGG | 0.554707 | 5.3:-26424074 | None:intergenic |
| TATGAAAGCTAGACAGCCAC+GGG | 0.557625 | 5.3:-26423488 | None:intergenic |
| CCCATATCAAAAGGACCTCT+AGG | 0.561580 | 5.3:-26424012 | None:intergenic |
| GTTGATCCTATAACAAGTCC+AGG | 0.562985 | 5.3:+26423436 | MS.gene066291:CDS |
| TTATTTAGTGAAATCATTGG+AGG | 0.564804 | 5.3:+26423723 | MS.gene066291:CDS |
| AACAAGTCCAGGTGATTATG+TGG | 0.565290 | 5.3:+26423447 | MS.gene066291:CDS |
| GGAATTCTTTCCTCACCCCA+AGG | 0.565481 | 5.3:-26423652 | None:intergenic |
| ACGAAGAAGATGTCATCACT+TGG | 0.566470 | 5.3:+26423311 | MS.gene066291:CDS |
| TAATTATTATAATGAAGTAC+CGG | 0.574818 | 5.3:+26423981 | MS.gene066291:CDS |
| GGACCTCTAGGATAAGGAAC+CGG | 0.579650 | 5.3:-26424000 | None:intergenic |
| AATCAATTCCACTGAAAAGG+TGG | 0.581608 | 5.3:-26424123 | None:intergenic |
| ATCGACATTACATTCTACAA+TGG | 0.582494 | 5.3:+26423565 | MS.gene066291:CDS |
| GAATTCTTTCCTCACCCCAA+GGG | 0.583805 | 5.3:-26423651 | None:intergenic |
| GTTTGCCCAATCTCGCTCCA+TGG | 0.583904 | 5.3:-26422999 | None:intergenic |
| TTATGAAAGCTAGACAGCCA+CGG | 0.592955 | 5.3:-26423489 | None:intergenic |
| GTTGTGGATCAAGTCATGGC+TGG | 0.604230 | 5.3:+26423275 | MS.gene066291:CDS |
| TGGTGTATGCCGTAACTCGT+TGG | 0.604557 | 5.3:+26423590 | MS.gene066291:CDS |
| AATCATTGGAGGGAGAGTTG+TGG | 0.606251 | 5.3:+26423734 | MS.gene066291:CDS |
| GGAATATATAACGTAAAACA+TGG | 0.617818 | 5.3:+26424033 | MS.gene066291:CDS |
| TCTGAAGGGATCATTAGCAT+AGG | 0.622050 | 5.3:-26423166 | None:intergenic |
| CGAAGAAGATGTCATCACTT+GGG | 0.623448 | 5.3:+26423312 | MS.gene066291:CDS |
| ACCATATAATTATCGATGGG+TGG | 0.627867 | 5.3:-26423370 | None:intergenic |
| GCTGCAACCACATAATCACC+TGG | 0.630262 | 5.3:-26423454 | None:intergenic |
| CGTACCATATAATTATCGAT+GGG | 0.639191 | 5.3:-26423373 | None:intergenic |
| GCAGCAATTTACACTACCCG+TGG | 0.645826 | 5.3:+26423472 | MS.gene066291:CDS |
| AGATGTTGTGGATCAAGTCA+TGG | 0.649193 | 5.3:+26423271 | MS.gene066291:CDS |
| GTACCGGTTCCTTATCCTAG+AGG | 0.650762 | 5.3:+26423997 | MS.gene066291:CDS |
| AGGGTCAACAATATCAACAA+AGG | 0.663310 | 5.3:+26423778 | MS.gene066291:CDS |
| TGTTATTCAAGTGACCCTTG+GGG | 0.675329 | 5.3:+26423637 | MS.gene066291:CDS |
| ATTGGAGGGAGAGTTGTGGA+TGG | 0.690403 | 5.3:+26423738 | MS.gene066291:CDS |
| GGTGGCACAACCCATATGGG+AGG | 0.700789 | 5.3:-26424105 | None:intergenic |
| TGTTATAGGATCAACTGACA+AGG | 0.708968 | 5.3:-26423428 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTATAATGAAGTAC+CGG | + | chr5.3:26423981-26424000 | MS.gene066291:CDS | 15.0% |
| !! | TACTTATTTAGTGAAATCAT+TGG | + | chr5.3:26423720-26423739 | MS.gene066291:CDS | 20.0% |
| !! | TTATATATTCCCATATCAAA+AGG | - | chr5.3:26424024-26424043 | None:intergenic | 20.0% |
| !! | TTCTTTACATGTATTTAAGT+TGG | + | chr5.3:26423807-26423826 | MS.gene066291:CDS | 20.0% |
| ! | CTTCTTTGTAACAAAACATT+TGG | - | chr5.3:26423676-26423695 | None:intergenic | 25.0% |
| ! | GATTTCACTAAATAAGTAAG+TGG | - | chr5.3:26423718-26423737 | None:intergenic | 25.0% |
| ! | GGAATATATAACGTAAAACA+TGG | + | chr5.3:26424033-26424052 | MS.gene066291:CDS | 25.0% |
| ! | TATTTAGTGAAATCATTGGA+GGG | + | chr5.3:26423724-26423743 | MS.gene066291:CDS | 25.0% |
| ! | TTATTTAGTGAAATCATTGG+AGG | + | chr5.3:26423723-26423742 | MS.gene066291:CDS | 25.0% |
| !! | TTAAGCATTGTCAATTCTAA+TGG | - | chr5.3:26423244-26423263 | None:intergenic | 25.0% |
| !!! | AATTTTTTTCCAACGAGTTA+CGG | - | chr5.3:26423602-26423621 | None:intergenic | 25.0% |
| AAGTTGGAATTGAATGACAA+AGG | + | chr5.3:26423823-26423842 | MS.gene066291:CDS | 30.0% | |
| ACGTACCATATAATTATCGA+TGG | - | chr5.3:26423377-26423396 | None:intergenic | 30.0% | |
| ATCAACATGATCACCAATTT+AGG | + | chr5.3:26423131-26423150 | MS.gene066291:CDS | 30.0% | |
| ATCGACATTACATTCTACAA+TGG | + | chr5.3:26423565-26423584 | MS.gene066291:CDS | 30.0% | |
| CATTACATTCTACAATGGTT+TGG | + | chr5.3:26423570-26423589 | MS.gene066291:CDS | 30.0% | |
| CGTACCATATAATTATCGAT+GGG | - | chr5.3:26423376-26423395 | None:intergenic | 30.0% | |
| GCATTATATTGCTCCTAAAT+TGG | - | chr5.3:26423147-26423166 | None:intergenic | 30.0% | |
| GGTGAGAAGGTTTATAAATA+GGG | + | chr5.3:26423759-26423778 | MS.gene066291:CDS | 30.0% | |
| TAATGTCGATGAAACCAAAA+TGG | - | chr5.3:26423555-26423574 | None:intergenic | 30.0% | |
| TGGTGAGAAGGTTTATAAAT+AGG | + | chr5.3:26423758-26423777 | MS.gene066291:CDS | 30.0% | |
| TTGAACCAATTGATCACATT+TGG | + | chr5.3:26423062-26423081 | MS.gene066291:CDS | 30.0% | |
| AACGTAAAACATGGAAGCTT+GGG | + | chr5.3:26424042-26424061 | MS.gene066291:CDS | 35.0% | |
| AATGGATACACTCTATTTGC+TGG | - | chr5.3:26423226-26423245 | None:intergenic | 35.0% | |
| ACCATATAATTATCGATGGG+TGG | - | chr5.3:26423373-26423392 | None:intergenic | 35.0% | |
| AGGGTCAACAATATCAACAA+AGG | + | chr5.3:26423778-26423797 | MS.gene066291:CDS | 35.0% | |
| ATAGGAGCAACATCCTTAAA+AGG | - | chr5.3:26423343-26423362 | None:intergenic | 35.0% | |
| CCAAACCAAATGTGATCAAT+TGG | - | chr5.3:26423070-26423089 | None:intergenic | 35.0% | |
| CCAATTGATCACATTTGGTT+TGG | + | chr5.3:26423067-26423086 | MS.gene066291:CDS | 35.0% | |
| CCTTACAAACCTTACTTCAA+GGG | + | chr5.3:26424075-26424094 | MS.gene066291:CDS | 35.0% | |
| CCTTGAAGTAAGGTTTGTAA+GGG | - | chr5.3:26424077-26424096 | None:intergenic | 35.0% | |
| CTTAACAACAAGAGATGTTG+TGG | + | chr5.3:26423259-26423278 | MS.gene066291:CDS | 35.0% | |
| TAACGTAAAACATGGAAGCT+TGG | + | chr5.3:26424041-26424060 | MS.gene066291:CDS | 35.0% | |
| TGTTATAGGATCAACTGACA+AGG | - | chr5.3:26423431-26423450 | None:intergenic | 35.0% | |
| TTACGACTTCAATGTGCATA+AGG | + | chr5.3:26423402-26423421 | MS.gene066291:CDS | 35.0% | |
| TTGGTTTCGTCTGCAAAAAT+TGG | + | chr5.3:26423086-26423105 | MS.gene066291:CDS | 35.0% | |
| TTGTCGATACTTGAGAGTTT+AGG | + | chr5.3:26423862-26423881 | MS.gene066291:CDS | 35.0% | |
| ! | ATACAAGACACTGACCATTT+TGG | + | chr5.3:26423538-26423557 | MS.gene066291:CDS | 35.0% |
| ! | TAAAAGCAGGACAAGAGTTT+TGG | + | chr5.3:26423509-26423528 | MS.gene066291:CDS | 35.0% |
| ! | TTGTTATTCAAGTGACCCTT+GGG | + | chr5.3:26423636-26423655 | MS.gene066291:CDS | 35.0% |
| !! | CTAAACAAACATCGCTTTTC+TGG | - | chr5.3:26423199-26423218 | None:intergenic | 35.0% |
| !! | GGTGATCATGTTGATGATTA+AGG | - | chr5.3:26423126-26423145 | None:intergenic | 35.0% |
| !! | TAATCACCTGGACTTGTTAT+AGG | - | chr5.3:26423445-26423464 | None:intergenic | 35.0% |
| !! | TGTCTAGCTTTCATAAAAGC+AGG | + | chr5.3:26423496-26423515 | MS.gene066291:CDS | 35.0% |
| !! | TTTGTTATTCAAGTGACCCT+TGG | + | chr5.3:26423635-26423654 | MS.gene066291:CDS | 35.0% |
| !!! | AATGTTTTGTTTGTGGGTGA+TGG | + | chr5.3:26423889-26423908 | MS.gene066291:CDS | 35.0% |
| !!! | AGGAGACAATGTTTTGTTTG+TGG | + | chr5.3:26423882-26423901 | MS.gene066291:CDS | 35.0% |
| !!! | GGAGACAATGTTTTGTTTGT+GGG | + | chr5.3:26423883-26423902 | MS.gene066291:CDS | 35.0% |
| AACAAGTCCAGGTGATTATG+TGG | + | chr5.3:26423447-26423466 | MS.gene066291:CDS | 40.0% | |
| ACGAAGAAGATGTCATCACT+TGG | + | chr5.3:26423311-26423330 | MS.gene066291:CDS | 40.0% | |
| AGATGTTGTGGATCAAGTCA+TGG | + | chr5.3:26423271-26423290 | MS.gene066291:CDS | 40.0% | |
| CCCTTACAAACCTTACTTCA+AGG | + | chr5.3:26424074-26424093 | MS.gene066291:CDS | 40.0% | |
| CCCTTGAAGTAAGGTTTGTA+AGG | - | chr5.3:26424078-26424097 | None:intergenic | 40.0% | |
| CGAAGAAGATGTCATCACTT+GGG | + | chr5.3:26423312-26423331 | MS.gene066291:CDS | 40.0% | |
| GCCACCCATCGATAATTATA+TGG | + | chr5.3:26423369-26423388 | MS.gene066291:CDS | 40.0% | |
| GTTGATCCTATAACAAGTCC+AGG | + | chr5.3:26423436-26423455 | MS.gene066291:CDS | 40.0% | |
| TCTGAAGGGATCATTAGCAT+AGG | - | chr5.3:26423169-26423188 | None:intergenic | 40.0% | |
| TGTTATTCAAGTGACCCTTG+GGG | + | chr5.3:26423637-26423656 | MS.gene066291:CDS | 40.0% | |
| TTATGAAAGCTAGACAGCCA+CGG | - | chr5.3:26423492-26423511 | None:intergenic | 40.0% | |
| TTTCTGGACTCTTCTCTGAA+GGG | - | chr5.3:26423183-26423202 | None:intergenic | 40.0% | |
| ! | CACTTGGGAGAATCCTTTTA+AGG | + | chr5.3:26423327-26423346 | MS.gene066291:CDS | 40.0% |
| ! | CCTAGAGGTCCTTTTGATAT+GGG | + | chr5.3:26424012-26424031 | MS.gene066291:CDS | 40.0% |
| ! | TCCTAGAGGTCCTTTTGATA+TGG | + | chr5.3:26424011-26424030 | MS.gene066291:CDS | 40.0% |
| ! | TTTTCTGGACTCTTCTCTGA+AGG | - | chr5.3:26423184-26423203 | None:intergenic | 40.0% |
| !! | TCAAAAGGACCTCTAGGATA+AGG | - | chr5.3:26424009-26424028 | None:intergenic | 40.0% |
| AAAAGGTGGCACAACCCATA+TGG | - | chr5.3:26424112-26424131 | None:intergenic | 45.0% | |
| AAAGGTGGCACAACCCATAT+GGG | - | chr5.3:26424111-26424130 | None:intergenic | 45.0% | |
| AATCATTGGAGGGAGAGTTG+TGG | + | chr5.3:26423734-26423753 | MS.gene066291:CDS | 45.0% | |
| CCCATATCAAAAGGACCTCT+AGG | - | chr5.3:26424015-26424034 | None:intergenic | 45.0% | |
| GAATTCTTTCCTCACCCCAA+GGG | - | chr5.3:26423654-26423673 | None:intergenic | 45.0% | |
| TATGAAAGCTAGACAGCCAC+GGG | - | chr5.3:26423491-26423510 | None:intergenic | 45.0% | |
| TCGATGGGTGGCAAACTAAT+AGG | - | chr5.3:26423361-26423380 | None:intergenic | 45.0% | |
| ! | GGTGTCATACCCTTGAAGTA+AGG | - | chr5.3:26424087-26424106 | None:intergenic | 45.0% |
| AGGGTATGACACCTCCCATA+TGG | + | chr5.3:26424094-26424113 | MS.gene066291:CDS | 50.0% | |
| ATTGGAGGGAGAGTTGTGGA+TGG | + | chr5.3:26423738-26423757 | MS.gene066291:CDS | 50.0% | |
| GAGAGTTGTGGATGGTGAGA+AGG | + | chr5.3:26423746-26423765 | MS.gene066291:CDS | 50.0% | |
| GCAGCAATTTACACTACCCG+TGG | + | chr5.3:26423472-26423491 | MS.gene066291:CDS | 50.0% | |
| GCTGCAACCACATAATCACC+TGG | - | chr5.3:26423457-26423476 | None:intergenic | 50.0% | |
| GGAATTCTTTCCTCACCCCA+AGG | - | chr5.3:26423655-26423674 | None:intergenic | 50.0% | |
| GGGTATGACACCTCCCATAT+GGG | + | chr5.3:26424095-26424114 | MS.gene066291:CDS | 50.0% | |
| GTTGTGGATCAAGTCATGGC+TGG | + | chr5.3:26423275-26423294 | MS.gene066291:CDS | 50.0% | |
| TGGTGTATGCCGTAACTCGT+TGG | + | chr5.3:26423590-26423609 | MS.gene066291:CDS | 50.0% | |
| !! | GGACCTCTAGGATAAGGAAC+CGG | - | chr5.3:26424003-26424022 | None:intergenic | 50.0% |
| !! | GTACCGGTTCCTTATCCTAG+AGG | + | chr5.3:26423997-26424016 | MS.gene066291:CDS | 50.0% |
| TTCAAGTGACCCTTGGGGTG+AGG | + | chr5.3:26423642-26423661 | MS.gene066291:CDS | 55.0% | |
| ! | GGGTTGTGCCACCTTTTCAG+TGG | + | chr5.3:26424115-26424134 | MS.gene066291:CDS | 55.0% |
| GGTGGCACAACCCATATGGG+AGG | - | chr5.3:26424108-26424127 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 26423001 | 26424143 | 26423001 | ID=MS.gene066291 |
| chr5.3 | mRNA | 26423001 | 26424143 | 26423001 | ID=MS.gene066291.t1;Parent=MS.gene066291 |
| chr5.3 | exon | 26423001 | 26424143 | 26423001 | ID=MS.gene066291.t1.exon1;Parent=MS.gene066291.t1 |
| chr5.3 | CDS | 26423001 | 26424143 | 26423001 | ID=cds.MS.gene066291.t1;Parent=MS.gene066291.t1 |
| Gene Sequence |
| Protein sequence |