Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52263.t1 | AES80177.2 | 93 | 373 | 24 | 2 | 1 | 372 | 1 | 372 | 5.00E-195 | 690.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52263.t1 | G7L4M9 | 93.0 | 373 | 24 | 2 | 1 | 372 | 1 | 372 | 3.6e-195 | 690.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52263.t1 | MTR_7g077650 | 93.029 | 373 | 24 | 2 | 1 | 372 | 1 | 372 | 0.0 | 699 |
MS.gene52263.t1 | MTR_7g077660 | 79.521 | 376 | 65 | 5 | 1 | 372 | 1 | 368 | 0.0 | 584 |
MS.gene52263.t1 | MTR_7g077620 | 67.553 | 376 | 108 | 8 | 1 | 369 | 1 | 369 | 1.53e-164 | 466 |
MS.gene52263.t1 | MTR_7g076110 | 52.159 | 301 | 122 | 8 | 85 | 372 | 22 | 313 | 2.15e-86 | 264 |
MS.gene52263.t1 | MTR_1g108740 | 45.358 | 377 | 166 | 16 | 1 | 370 | 1 | 344 | 6.12e-85 | 261 |
MS.gene52263.t1 | MTR_7g076100 | 57.143 | 245 | 86 | 7 | 137 | 372 | 66 | 300 | 6.90e-82 | 252 |
MS.gene52263.t1 | MTR_7g076100 | 53.425 | 73 | 32 | 2 | 1 | 71 | 1 | 73 | 8.24e-16 | 77.4 |
MS.gene52263.t1 | MTR_5g038260 | 41.363 | 411 | 169 | 19 | 3 | 372 | 4 | 383 | 1.01e-75 | 239 |
MS.gene52263.t1 | MTR_5g038230 | 39.599 | 399 | 159 | 16 | 5 | 370 | 4 | 353 | 4.29e-72 | 229 |
MS.gene52263.t1 | MTR_1g064570 | 39.120 | 432 | 168 | 22 | 3 | 372 | 2 | 400 | 1.02e-67 | 219 |
MS.gene52263.t1 | MTR_5g082770 | 44.654 | 318 | 130 | 11 | 5 | 308 | 4 | 289 | 3.21e-67 | 214 |
MS.gene52263.t1 | MTR_1g016150 | 50.000 | 192 | 90 | 5 | 1 | 187 | 1 | 191 | 2.13e-48 | 164 |
MS.gene52263.t1 | MTR_5g082780 | 40.408 | 245 | 96 | 10 | 113 | 337 | 1 | 215 | 3.59e-38 | 137 |
MS.gene52263.t1 | MTR_7g076130 | 53.125 | 128 | 50 | 3 | 169 | 292 | 27 | 148 | 3.15e-35 | 127 |
MS.gene52263.t1 | MTR_1g108750 | 41.667 | 156 | 54 | 7 | 5 | 158 | 4 | 124 | 8.70e-20 | 84.7 |
MS.gene52263.t1 | MTR_3g114970 | 25.250 | 400 | 215 | 20 | 4 | 368 | 3 | 353 | 2.28e-14 | 73.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 75 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAACTGCATGCAACAATTT+TGG | 0.088169 | 7.4:-28463853 | MS.gene52263:CDS |
TCCTAAATTGATGATATTTA+TGG | 0.119990 | 7.4:+28464794 | None:intergenic |
TCTTATAGGCGTCCTTATTA+TGG | 0.163187 | 7.4:-28464199 | MS.gene52263:CDS |
ACCATAAATATCATCAATTT+AGG | 0.199840 | 7.4:-28464795 | MS.gene52263:CDS |
AAAGACCAAGCCAGTCATTT+TGG | 0.211714 | 7.4:-28464414 | MS.gene52263:CDS |
CTCCAGAACTATATTCTTAT+AGG | 0.226179 | 7.4:-28464213 | MS.gene52263:CDS |
GTTGCAGTGATTTACAATTT+TGG | 0.255525 | 7.4:-28464451 | MS.gene52263:CDS |
CAAATTCAGAACTTCCTCTT+AGG | 0.285333 | 7.4:-28464903 | MS.gene52263:CDS |
CAATACAATGAAATTGTGTT+TGG | 0.287038 | 7.4:-28464635 | MS.gene52263:CDS |
CATGAACAAACTTGAGAGTT+TGG | 0.291578 | 7.4:-28464047 | MS.gene52263:CDS |
ACACAATTTCATTGTATTGA+TGG | 0.309706 | 7.4:+28464639 | None:intergenic |
GGAGCTATACTGCTCTTAAA+AGG | 0.328493 | 7.4:+28464553 | None:intergenic |
ACCTCTCGAATCTCTCAAAA+AGG | 0.330053 | 7.4:-28464518 | MS.gene52263:CDS |
AAATAAGCACGCCCATAATA+AGG | 0.333798 | 7.4:+28464187 | None:intergenic |
TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7.4:+28464478 | None:intergenic |
CTTATAGGCGTCCTTATTAT+GGG | 0.341054 | 7.4:-28464198 | MS.gene52263:CDS |
GCCTCTGCTTTCTCCAAGTT+GGG | 0.342749 | 7.4:-28463974 | MS.gene52263:CDS |
GAAGGATGGGAGAATTGAAT+AGG | 0.350056 | 7.4:+28464661 | None:intergenic |
CGCCTATAAGAATATAGTTC+TGG | 0.352063 | 7.4:+28464211 | None:intergenic |
AATTGAATCCTTTCCCAACT+TGG | 0.373744 | 7.4:+28463961 | None:intergenic |
TTCGAGAGGTGGCAGACTAA+TGG | 0.374836 | 7.4:+28464531 | None:intergenic |
TAGCAATGAGGAAGATTGAT+TGG | 0.387230 | 7.4:-28464927 | None:intergenic |
AGCCTCTGCTTTCTCCAAGT+TGG | 0.394920 | 7.4:-28463975 | MS.gene52263:CDS |
CCATGGTTGGCTTGCATTGG+TGG | 0.397590 | 7.4:-28464605 | MS.gene52263:CDS |
AACTACAAACAGACTATGTT+AGG | 0.407557 | 7.4:-28464861 | MS.gene52263:CDS |
CTGTGCTATCAACAAATATC+AGG | 0.408578 | 7.4:+28464338 | None:intergenic |
AAAAGGATTCACTAGAGTTA+TGG | 0.411464 | 7.4:+28464570 | None:intergenic |
TAGGTTGGTTCTTGAAAAGT+TGG | 0.411477 | 7.4:-28464884 | MS.gene52263:CDS |
TAGGGTACTCTTTCTTACTT+AGG | 0.417568 | 7.4:+28464680 | None:intergenic |
CAGTTCCAATTTGAAAATGC+AGG | 0.419394 | 7.4:+28464096 | None:intergenic |
AAATTGTTGCATGCAGTTGA+AGG | 0.433203 | 7.4:+28463856 | None:intergenic |
TCGAGAGGTGGCAGACTAAT+GGG | 0.438780 | 7.4:+28464532 | None:intergenic |
ACTAGCCATCTTCTCATAGT+AGG | 0.443005 | 7.4:+28464252 | None:intergenic |
GGGTTCTACCACAACTTAAG+TGG | 0.451369 | 7.4:-28463832 | MS.gene52263:CDS |
TCATTGTATTGATGGAAGGA+TGG | 0.459268 | 7.4:+28464647 | None:intergenic |
TAGCCATGGTTGGCTTGCAT+TGG | 0.461010 | 7.4:-28464608 | MS.gene52263:CDS |
AATACAATGAAATTGTGTTT+GGG | 0.461564 | 7.4:-28464634 | MS.gene52263:CDS |
TGCTTTCTCCAAGTTGGGAA+AGG | 0.471767 | 7.4:-28463969 | MS.gene52263:CDS |
ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7.4:+28464477 | None:intergenic |
AAGGATGGGAGAATTGAATA+GGG | 0.477738 | 7.4:+28464662 | None:intergenic |
ATGATGAAAAGATTCTTAAT+CGG | 0.482155 | 7.4:-28464136 | MS.gene52263:CDS |
AGAAGGATTGTTCAACTTGA+AGG | 0.483358 | 7.4:+28464303 | None:intergenic |
AATCATTGACCGGAGACATA+TGG | 0.484616 | 7.4:-28464159 | MS.gene52263:CDS |
CATTGTATTGATGGAAGGAT+GGG | 0.486361 | 7.4:+28464648 | None:intergenic |
TTCAGAACTTCCTCTTAGGT+TGG | 0.489984 | 7.4:-28464899 | MS.gene52263:CDS |
TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7.4:-28464473 | MS.gene52263:CDS |
TCGGTGTTGTGTGTAAGAAT+TGG | 0.510817 | 7.4:-28464837 | MS.gene52263:CDS |
TTTCATCATCCATATGTCTC+CGG | 0.512197 | 7.4:+28464150 | None:intergenic |
AGCAATGAGGAAGATTGATT+GGG | 0.516916 | 7.4:-28464926 | None:intergenic |
AATTTCATTGTATTGATGGA+AGG | 0.521334 | 7.4:+28464643 | None:intergenic |
TTGTGTTTGGGCTGTAGCCA+TGG | 0.523675 | 7.4:-28464622 | MS.gene52263:CDS |
GTTTGGGCTGTAGCCATGGT+TGG | 0.525841 | 7.4:-28464618 | MS.gene52263:CDS |
CGAATCCAAAATGACTGGCT+TGG | 0.533467 | 7.4:+28464409 | None:intergenic |
AGTTCCAATTTGAAAATGCA+GGG | 0.535496 | 7.4:+28464097 | None:intergenic |
AACTTGGAGAAAGCAGAGGC+TGG | 0.538703 | 7.4:+28463977 | None:intergenic |
TATATCTTTAATGTGAAGGA+TGG | 0.540947 | 7.4:-28463908 | MS.gene52263:CDS |
ACTGCAACCACATAATCACT+TGG | 0.547627 | 7.4:+28464466 | None:intergenic |
CAAACAGACTATGTTAGGTT+CGG | 0.551280 | 7.4:-28464856 | MS.gene52263:CDS |
TCAAATGAGTCATCAGAAGA+AGG | 0.554017 | 7.4:+28464286 | None:intergenic |
GGTTCTACCACAACTTAAGT+GGG | 0.555055 | 7.4:-28463831 | MS.gene52263:CDS |
TATCTATATCTTTAATGTGA+AGG | 0.560244 | 7.4:-28463912 | MS.gene52263:CDS |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7.4:+28464492 | None:intergenic |
CAGTTGAAGGAAAGCACTGA+AGG | 0.581076 | 7.4:+28463869 | None:intergenic |
CTATAAGAATATAGTTCTGG+AGG | 0.587258 | 7.4:+28464214 | None:intergenic |
GTTCAACTTGAAGGATACAA+TGG | 0.598885 | 7.4:+28464312 | None:intergenic |
TTTGAGAGGATCATCAGCAT+AGG | 0.603104 | 7.4:+28464760 | None:intergenic |
CTACACGAATCCAAAATGAC+TGG | 0.605238 | 7.4:+28464404 | None:intergenic |
AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7.4:+28464479 | None:intergenic |
TATAAGAATATAGTTCTGGA+GGG | 0.624070 | 7.4:+28464215 | None:intergenic |
TCCCAACTTGGAGAAAGCAG+AGG | 0.625436 | 7.4:+28463973 | None:intergenic |
ATGAAAAGATTCTTAATCGG+CGG | 0.627273 | 7.4:-28464133 | MS.gene52263:CDS |
GATCAATCCCACTTAAGTTG+TGG | 0.631134 | 7.4:+28463824 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.636696 | 7.4:+28464467 | None:intergenic |
CCACCAATGCAAGCCAACCA+TGG | 0.665097 | 7.4:+28464605 | None:intergenic |
TTGGAACTGGATGCCCAGAG+TGG | 0.674354 | 7.4:-28464082 | MS.gene52263:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATTCAATTTATTTTGTTAA+TGG | - | chr7.4:28464801-28464820 | MS.gene52263:CDS | 15.0% |
!! | AATACAATGAAATTGTGTTT+GGG | - | chr7.4:28464114-28464133 | MS.gene52263:CDS | 20.0% |
!! | ACCATAAATATCATCAATTT+AGG | - | chr7.4:28463953-28463972 | MS.gene52263:CDS | 20.0% |
!! | ATGATGAAAAGATTCTTAAT+CGG | - | chr7.4:28464612-28464631 | MS.gene52263:CDS | 20.0% |
!! | TATCTATATCTTTAATGTGA+AGG | - | chr7.4:28464836-28464855 | MS.gene52263:CDS | 20.0% |
!!! | ACTGATGTTGTATTTTATAA+AGG | - | chr7.4:28464387-28464406 | MS.gene52263:CDS | 20.0% |
!!! | TCCTAAATTGATGATATTTA+TGG | + | chr7.4:28463957-28463976 | None:intergenic | 20.0% |
! | ACACAATTTCATTGTATTGA+TGG | + | chr7.4:28464112-28464131 | None:intergenic | 25.0% |
! | CAATACAATGAAATTGTGTT+TGG | - | chr7.4:28464113-28464132 | MS.gene52263:CDS | 25.0% |
! | TATATCTTTAATGTGAAGGA+TGG | - | chr7.4:28464840-28464859 | MS.gene52263:CDS | 25.0% |
! | TTCTCATAGTAGGAAAAATT+AGG | + | chr7.4:28464489-28464508 | None:intergenic | 25.0% |
!! | AATTTCATTGTATTGATGGA+AGG | + | chr7.4:28464108-28464127 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+CGG | - | chr7.4:28464579-28464598 | MS.gene52263:CDS | 25.0% |
!!! | TATAAGAATATAGTTCTGGA+GGG | + | chr7.4:28464536-28464555 | None:intergenic | 25.0% |
AAAAGGATTCACTAGAGTTA+TGG | + | chr7.4:28464181-28464200 | None:intergenic | 30.0% | |
AACTACAAACAGACTATGTT+AGG | - | chr7.4:28463887-28463906 | MS.gene52263:CDS | 30.0% | |
AGTTCCAATTTGAAAATGCA+GGG | + | chr7.4:28464654-28464673 | None:intergenic | 30.0% | |
ATGAAAAGATTCTTAATCGG+CGG | - | chr7.4:28464615-28464634 | MS.gene52263:CDS | 30.0% | |
CTCCAGAACTATATTCTTAT+AGG | - | chr7.4:28464535-28464554 | MS.gene52263:CDS | 30.0% | |
! | GTTGCAGTGATTTACAATTT+TGG | - | chr7.4:28464297-28464316 | MS.gene52263:CDS | 30.0% |
! | TTTTTCCTACTATGAGAAGA+TGG | - | chr7.4:28464491-28464510 | MS.gene52263:CDS | 30.0% |
!! | ATTTTATTTGTCGGAAGTGT+TGG | - | chr7.4:28464732-28464751 | MS.gene52263:CDS | 30.0% |
!! | CTATAAGAATATAGTTCTGG+AGG | + | chr7.4:28464537-28464556 | None:intergenic | 30.0% |
!! | GAAGACAGCATTTTATTTGT+CGG | - | chr7.4:28464723-28464742 | MS.gene52263:CDS | 30.0% |
!!! | TATGCGACAATTTTTTTGAG+AGG | + | chr7.4:28464005-28464024 | None:intergenic | 30.0% |
AAATAAGCACGCCCATAATA+AGG | + | chr7.4:28464564-28464583 | None:intergenic | 35.0% | |
AAATTGTTGCATGCAGTTGA+AGG | + | chr7.4:28464895-28464914 | None:intergenic | 35.0% | |
AAGGATGGGAGAATTGAATA+GGG | + | chr7.4:28464089-28464108 | None:intergenic | 35.0% | |
AATTGAATCCTTTCCCAACT+TGG | + | chr7.4:28464790-28464809 | None:intergenic | 35.0% | |
AGAAGGATTGTTCAACTTGA+AGG | + | chr7.4:28464448-28464467 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+TGG | + | chr7.4:28464274-28464293 | None:intergenic | 35.0% | |
CAAACAGACTATGTTAGGTT+CGG | - | chr7.4:28463892-28463911 | MS.gene52263:CDS | 35.0% | |
CAAATTCAGAACTTCCTCTT+AGG | - | chr7.4:28463845-28463864 | MS.gene52263:CDS | 35.0% | |
CAGTTCCAATTTGAAAATGC+AGG | + | chr7.4:28464655-28464674 | None:intergenic | 35.0% | |
CATGAACAAACTTGAGAGTT+TGG | - | chr7.4:28464701-28464720 | MS.gene52263:CDS | 35.0% | |
CGCCTATAAGAATATAGTTC+TGG | + | chr7.4:28464540-28464559 | None:intergenic | 35.0% | |
CTGTGCTATCAACAAATATC+AGG | + | chr7.4:28464413-28464432 | None:intergenic | 35.0% | |
CTTATAGGCGTCCTTATTAT+GGG | - | chr7.4:28464550-28464569 | MS.gene52263:CDS | 35.0% | |
GTTCAACTTGAAGGATACAA+TGG | + | chr7.4:28464439-28464458 | None:intergenic | 35.0% | |
TAATCACTTGGGCTTGTAAT+GGG | + | chr7.4:28464273-28464292 | None:intergenic | 35.0% | |
TCAAATGAGTCATCAGAAGA+AGG | + | chr7.4:28464465-28464484 | None:intergenic | 35.0% | |
TCTTATAGGCGTCCTTATTA+TGG | - | chr7.4:28464549-28464568 | MS.gene52263:CDS | 35.0% | |
TTTCATCATCCATATGTCTC+CGG | + | chr7.4:28464601-28464620 | None:intergenic | 35.0% | |
! | CAAACCCTGCATTTTCAAAT+TGG | - | chr7.4:28464647-28464666 | MS.gene52263:CDS | 35.0% |
! | CAACTGCATGCAACAATTTT+GGG | - | chr7.4:28464896-28464915 | MS.gene52263:CDS | 35.0% |
! | CATTGTATTGATGGAAGGAT+GGG | + | chr7.4:28464103-28464122 | None:intergenic | 35.0% |
! | CTGCATTTTCAAATTGGAAC+TGG | - | chr7.4:28464653-28464672 | MS.gene52263:CDS | 35.0% |
! | TAGGGTACTCTTTCTTACTT+AGG | + | chr7.4:28464071-28464090 | None:intergenic | 35.0% |
! | TCAACTGCATGCAACAATTT+TGG | - | chr7.4:28464895-28464914 | MS.gene52263:CDS | 35.0% |
! | TCATTGTATTGATGGAAGGA+TGG | + | chr7.4:28464104-28464123 | None:intergenic | 35.0% |
!! | AGTTCTGGAGGGAAAAAATA+TGG | + | chr7.4:28464525-28464544 | None:intergenic | 35.0% |
!! | TAGGTTGGTTCTTGAAAAGT+TGG | - | chr7.4:28463864-28463883 | MS.gene52263:CDS | 35.0% |
!! | TTTTCAAGAACCAACCTAAG+AGG | + | chr7.4:28463862-28463881 | None:intergenic | 35.0% |
AATCACTTGGGCTTGTAATG+GGG | + | chr7.4:28464272-28464291 | None:intergenic | 40.0% | |
AATCATTGACCGGAGACATA+TGG | - | chr7.4:28464589-28464608 | MS.gene52263:CDS | 40.0% | |
ACCTCTCGAATCTCTCAAAA+AGG | - | chr7.4:28464230-28464249 | MS.gene52263:CDS | 40.0% | |
ACTAGCCATCTTCTCATAGT+AGG | + | chr7.4:28464499-28464518 | None:intergenic | 40.0% | |
ACTGCAACCACATAATCACT+TGG | + | chr7.4:28464285-28464304 | None:intergenic | 40.0% | |
CTACACGAATCCAAAATGAC+TGG | + | chr7.4:28464347-28464366 | None:intergenic | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | chr7.4:28464284-28464303 | None:intergenic | 40.0% | |
GAAGGATGGGAGAATTGAAT+AGG | + | chr7.4:28464090-28464109 | None:intergenic | 40.0% | |
GGAGCTATACTGCTCTTAAA+AGG | + | chr7.4:28464198-28464217 | None:intergenic | 40.0% | |
GGTTCTACCACAACTTAAGT+GGG | - | chr7.4:28464917-28464936 | MS.gene52263:CDS | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | chr7.4:28464275-28464294 | MS.gene52263:CDS | 40.0% | |
TTCAGAACTTCCTCTTAGGT+TGG | - | chr7.4:28463849-28463868 | MS.gene52263:CDS | 40.0% | |
TTTGAGAGGATCATCAGCAT+AGG | + | chr7.4:28463991-28464010 | None:intergenic | 40.0% | |
! | AAAGACCAAGCCAGTCATTT+TGG | - | chr7.4:28464334-28464353 | MS.gene52263:CDS | 40.0% |
!! | ACCTTTTTGAGAGATTCGAG+AGG | + | chr7.4:28464234-28464253 | None:intergenic | 40.0% |
!! | TCGGTGTTGTGTGTAAGAAT+TGG | - | chr7.4:28463911-28463930 | MS.gene52263:CDS | 40.0% |
!! | TTTTTGAGAGATTCGAGAGG+TGG | + | chr7.4:28464231-28464250 | None:intergenic | 40.0% |
!!! | GTGTTCTAGTTTTCCACTCT+GGG | + | chr7.4:28464682-28464701 | None:intergenic | 40.0% |
!!! | TGTGTTCTAGTTTTCCACTC+TGG | + | chr7.4:28464683-28464702 | None:intergenic | 40.0% |
GGGTTCTACCACAACTTAAG+TGG | - | chr7.4:28464916-28464935 | MS.gene52263:CDS | 45.0% | |
! | CGAATCCAAAATGACTGGCT+TGG | + | chr7.4:28464342-28464361 | None:intergenic | 45.0% |
! | TGCTTTCTCCAAGTTGGGAA+AGG | - | chr7.4:28464779-28464798 | MS.gene52263:CDS | 45.0% |
!! | CAGTTGAAGGAAAGCACTGA+AGG | + | chr7.4:28464882-28464901 | None:intergenic | 45.0% |
AACTTGGAGAAAGCAGAGGC+TGG | + | chr7.4:28464774-28464793 | None:intergenic | 50.0% | |
AGCCTCTGCTTTCTCCAAGT+TGG | - | chr7.4:28464773-28464792 | MS.gene52263:CDS | 50.0% | |
GCCTCTGCTTTCTCCAAGTT+GGG | - | chr7.4:28464774-28464793 | MS.gene52263:CDS | 50.0% | |
TCCCAACTTGGAGAAAGCAG+AGG | + | chr7.4:28464778-28464797 | None:intergenic | 50.0% | |
TCGAGAGGTGGCAGACTAAT+GGG | + | chr7.4:28464219-28464238 | None:intergenic | 50.0% | |
TTCGAGAGGTGGCAGACTAA+TGG | + | chr7.4:28464220-28464239 | None:intergenic | 50.0% | |
TTGTGTTTGGGCTGTAGCCA+TGG | - | chr7.4:28464126-28464145 | MS.gene52263:CDS | 50.0% | |
! | TGTAATGGGGTCAGCAGACA+AGG | + | chr7.4:28464259-28464278 | None:intergenic | 50.0% |
!! | TAGCCATGGTTGGCTTGCAT+TGG | - | chr7.4:28464140-28464159 | MS.gene52263:CDS | 50.0% |
CCACCAATGCAAGCCAACCA+TGG | + | chr7.4:28464146-28464165 | None:intergenic | 55.0% | |
GTTTGGGCTGTAGCCATGGT+TGG | - | chr7.4:28464130-28464149 | MS.gene52263:CDS | 55.0% | |
TTGGAACTGGATGCCCAGAG+TGG | - | chr7.4:28464666-28464685 | MS.gene52263:CDS | 55.0% | |
!! | CCATGGTTGGCTTGCATTGG+TGG | - | chr7.4:28464143-28464162 | MS.gene52263:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 28463826 | 28464944 | 28463826 | ID=MS.gene52263 |
chr7.4 | mRNA | 28463826 | 28464944 | 28463826 | ID=MS.gene52263.t1;Parent=MS.gene52263 |
chr7.4 | exon | 28463826 | 28464944 | 28463826 | ID=MS.gene52263.t1.exon1;Parent=MS.gene52263.t1 |
chr7.4 | CDS | 28463826 | 28464944 | 28463826 | ID=cds.MS.gene52263.t1;Parent=MS.gene52263.t1 |
Gene Sequence |
Protein sequence |