Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73726.t1 | RHN46952.1 | 68.7 | 371 | 103 | 3 | 1 | 360 | 1 | 369 | 2.00E-132 | 482.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73726.t1 | G7L4M6 | 68.7 | 371 | 103 | 3 | 1 | 360 | 1 | 369 | 1.5e-132 | 482.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73726.t1 | MTR_7g077620 | 68.548 | 372 | 104 | 3 | 1 | 361 | 1 | 370 | 1.15e-173 | 488 |
| MS.gene73726.t1 | MTR_7g077650 | 64.737 | 380 | 109 | 10 | 1 | 363 | 1 | 372 | 6.97e-154 | 437 |
| MS.gene73726.t1 | MTR_7g077660 | 62.069 | 377 | 120 | 10 | 1 | 363 | 1 | 368 | 1.93e-145 | 416 |
| MS.gene73726.t1 | MTR_1g108740 | 43.935 | 371 | 171 | 15 | 1 | 361 | 1 | 344 | 3.80e-83 | 256 |
| MS.gene73726.t1 | MTR_7g076110 | 48.475 | 295 | 131 | 6 | 87 | 363 | 22 | 313 | 6.35e-79 | 244 |
| MS.gene73726.t1 | MTR_7g076100 | 56.962 | 237 | 90 | 3 | 138 | 363 | 65 | 300 | 7.13e-79 | 244 |
| MS.gene73726.t1 | MTR_7g076100 | 78.182 | 55 | 10 | 2 | 1 | 54 | 1 | 54 | 7.17e-19 | 86.3 |
| MS.gene73726.t1 | MTR_5g038260 | 40.100 | 399 | 182 | 15 | 3 | 363 | 4 | 383 | 1.79e-71 | 228 |
| MS.gene73726.t1 | MTR_1g064570 | 39.379 | 419 | 176 | 17 | 3 | 363 | 2 | 400 | 1.43e-69 | 223 |
| MS.gene73726.t1 | MTR_5g082770 | 45.902 | 305 | 132 | 9 | 5 | 296 | 4 | 288 | 3.96e-68 | 216 |
| MS.gene73726.t1 | MTR_5g038230 | 40.052 | 387 | 165 | 15 | 5 | 361 | 4 | 353 | 3.01e-67 | 216 |
| MS.gene73726.t1 | MTR_1g016150 | 48.744 | 199 | 95 | 6 | 1 | 196 | 1 | 195 | 4.78e-51 | 170 |
| MS.gene73726.t1 | MTR_5g082780 | 42.396 | 217 | 101 | 8 | 115 | 317 | 1 | 207 | 5.07e-34 | 125 |
| MS.gene73726.t1 | MTR_7g076130 | 50.000 | 130 | 50 | 5 | 169 | 284 | 25 | 153 | 3.41e-26 | 102 |
| MS.gene73726.t1 | MTR_1g108750 | 43.949 | 157 | 51 | 7 | 5 | 160 | 4 | 124 | 5.37e-22 | 90.5 |
| MS.gene73726.t1 | MTR_3g114990 | 26.289 | 388 | 202 | 17 | 4 | 340 | 22 | 376 | 1.76e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 80 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACTCTACGTTTACAAAT+TGG | 0.205980 | 6.3:-34882726 | MS.gene73726:CDS |
| AACTTCCATCCTTCGCATTA+TGG | 0.220578 | 6.3:+34882522 | None:intergenic |
| TTTCAACATACTTGAGAGTT+TGG | 0.271304 | 6.3:-34882672 | MS.gene73726:CDS |
| CAACCGGATGTCACATCTTT+GGG | 0.283463 | 6.3:-34882471 | MS.gene73726:CDS |
| TAATTACTCGGGCTTGTAAT+CGG | 0.293843 | 6.3:+34883064 | None:intergenic |
| GTTGAACCCGAAGCTTAAAA+TGG | 0.296182 | 6.3:+34882895 | None:intergenic |
| TCAACCGGATGTCACATCTT+TGG | 0.300744 | 6.3:-34882472 | MS.gene73726:CDS |
| TTTCCAGAACAATATCATTA+TGG | 0.309110 | 6.3:-34882833 | MS.gene73726:CDS |
| GGAGCTACACTATACTTAAA+AGG | 0.314471 | 6.3:+34883139 | None:intergenic |
| GACATCCGGTTGAAGGAAAT+TGG | 0.322776 | 6.3:+34882482 | None:intergenic |
| CAATGAAATGACGGTGTGTT+TGG | 0.335412 | 6.3:-34883221 | MS.gene73726:CDS |
| GAAGGATGGGATAATTGAAT+AGG | 0.335830 | 6.3:+34883247 | None:intergenic |
| AAGAACACATAGATCATGTT+AGG | 0.348741 | 6.3:-34883450 | MS.gene73726:CDS |
| AAAAGGATTCGCTAGTGTTA+TGG | 0.360726 | 6.3:+34883156 | None:intergenic |
| ACACACCGTCATTTCATTGA+TGG | 0.365745 | 6.3:+34883225 | None:intergenic |
| TGGATTCGTGTAAACAGATA+TGG | 0.378525 | 6.3:-34882980 | MS.gene73726:CDS |
| AGAAGGTCTACCTCTTAGTT+TGG | 0.383875 | 6.3:-34883488 | MS.gene73726:CDS |
| CTACGTTTACAAATTGGAAC+TGG | 0.389715 | 6.3:-34882720 | MS.gene73726:CDS |
| CTTTACCAATTTCCTTCAAC+CGG | 0.393860 | 6.3:-34882487 | MS.gene73726:CDS |
| CCATGGTTGGCTTGCATTGG+TGG | 0.402911 | 6.3:-34883191 | MS.gene73726:CDS |
| TTGGAGAGTTGGCAGACTAA+TGG | 0.403671 | 6.3:+34883117 | None:intergenic |
| GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 6.3:-34882451 | MS.gene73726:CDS |
| AGGCAATGAGGAAGGTAGAT+TGG | 0.421191 | 6.3:-34883519 | None:intergenic |
| CCTCCATAATGATATTGTTC+TGG | 0.422685 | 6.3:+34882830 | None:intergenic |
| AATTACTCGGGCTTGTAATC+GGG | 0.426509 | 6.3:+34883065 | None:intergenic |
| TGGAGAGTTGGCAGACTAAT+GGG | 0.429349 | 6.3:+34883118 | None:intergenic |
| AGTACTAGCCATCTCATAAC+AGG | 0.432398 | 6.3:+34882865 | None:intergenic |
| GTAGATTGGGCAAATTTAGA+AGG | 0.435773 | 6.3:-34883505 | MS.gene73726:CDS |
| AATGAAATGACGGTGTGTTT+GGG | 0.468609 | 6.3:-34883220 | MS.gene73726:CDS |
| GGCAATGAGGAAGGTAGATT+GGG | 0.471328 | 6.3:-34883518 | None:intergenic |
| TAGTTTGGTTCTTGAGAAGT+TGG | 0.473111 | 6.3:-34883473 | MS.gene73726:CDS |
| AAGGATGGGATAATTGAATA+GGG | 0.479464 | 6.3:+34883248 | None:intergenic |
| TTGTTTCCCCAAGTTTGAAA+AGG | 0.479995 | 6.3:-34882597 | MS.gene73726:CDS |
| GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 6.3:-34882450 | MS.gene73726:CDS |
| AACTCTCCAATCTGTTTACA+AGG | 0.481694 | 6.3:-34883104 | MS.gene73726:CDS |
| TAGCCATGGTTGGCTTGCAT+TGG | 0.484269 | 6.3:-34883194 | MS.gene73726:CDS |
| TTCTCAAGAACCAAACTAAG+AGG | 0.491952 | 6.3:+34883478 | None:intergenic |
| CTGATATTTGCTGTTGGCAA+CGG | 0.495311 | 6.3:-34882923 | MS.gene73726:CDS |
| TCATTTCATTGATGGAAGGA+TGG | 0.502472 | 6.3:+34883233 | None:intergenic |
| AAGATGTGACATCCGGTTGA+AGG | 0.515408 | 6.3:+34882475 | None:intergenic |
| CAATATCATTATGGAGGGCA+TGG | 0.528364 | 6.3:-34882824 | MS.gene73726:CDS |
| GATCAATCCCATTGAAATTG+TGG | 0.531759 | 6.3:+34882443 | None:intergenic |
| AATCATTGACCGGAGACCTA+TGG | 0.532480 | 6.3:-34882790 | MS.gene73726:CDS |
| CCAGAACAATATCATTATGG+AGG | 0.533728 | 6.3:-34882830 | MS.gene73726:CDS |
| AAAGAGCAAGTCAATCATCC+TGG | 0.535979 | 6.3:-34883000 | MS.gene73726:CDS |
| GTGTGTTTGGGCGTTAGCCA+TGG | 0.536708 | 6.3:-34883208 | MS.gene73726:CDS |
| TTTCACCATCCATAGGTCTC+CGG | 0.537035 | 6.3:+34882781 | None:intergenic |
| CAAATCCATAATGCGAAGGA+TGG | 0.537880 | 6.3:-34882527 | MS.gene73726:CDS |
| TTGTAAACAGATTGGAGAGT+TGG | 0.542514 | 6.3:+34883106 | None:intergenic |
| ATATCTGTTTACACGAATCC+AGG | 0.545308 | 6.3:+34882982 | None:intergenic |
| AAAGGTCTGATATTTGCTGT+TGG | 0.547450 | 6.3:-34882929 | MS.gene73726:CDS |
| CATTTCATTGATGGAAGGAT+GGG | 0.554300 | 6.3:+34883234 | None:intergenic |
| GTTTGGGCGTTAGCCATGGT+TGG | 0.554659 | 6.3:-34883204 | MS.gene73726:CDS |
| AGGTAACCTTGTAAACAGAT+TGG | 0.555212 | 6.3:+34883098 | None:intergenic |
| TATTTAATTTACGATGGCGA+TGG | 0.560307 | 6.3:-34882566 | MS.gene73726:CDS |
| GAACCCAAAGATGTGACATC+CGG | 0.561035 | 6.3:+34882468 | None:intergenic |
| TTCGTGTGGTGTGCAAGACT+TGG | 0.561436 | 6.3:-34883426 | MS.gene73726:CDS |
| TTCAAACTTGGGGAAACAAG+AGG | 0.563350 | 6.3:+34882601 | None:intergenic |
| TCAATTTATTTAATTTACGA+TGG | 0.567180 | 6.3:-34882572 | MS.gene73726:CDS |
| CAGAACAATATCATTATGGA+GGG | 0.569165 | 6.3:-34882829 | MS.gene73726:CDS |
| CAATTCTGCCTGTTATGAGA+TGG | 0.570742 | 6.3:-34882873 | MS.gene73726:CDS |
| GTTGCAGCGATTTACAATTG+TGG | 0.573110 | 6.3:-34883037 | MS.gene73726:CDS |
| GCTGCAACCACGTAATTACT+CGG | 0.580071 | 6.3:+34883052 | None:intergenic |
| AGAGGATCATCAACATAGGA+TGG | 0.580233 | 6.3:+34883350 | None:intergenic |
| TATGAGAATTATTGTATGAG+AGG | 0.586159 | 6.3:+34883332 | None:intergenic |
| TCCTTCCATCAATGAAATGA+CGG | 0.587156 | 6.3:-34883230 | MS.gene73726:CDS |
| ACCGTCATTTCATTGATGGA+AGG | 0.592100 | 6.3:+34883229 | None:intergenic |
| ATTATGATAGGCAATGAGGA+AGG | 0.609073 | 6.3:-34883527 | None:intergenic |
| AACTTGGGGAAACAAGAGGC+TGG | 0.613015 | 6.3:+34882605 | None:intergenic |
| TTGGAACTGGACGCTATGAG+TGG | 0.614160 | 6.3:-34882707 | MS.gene73726:CDS |
| TATGAGAGGATCATCAACAT+AGG | 0.615056 | 6.3:+34883346 | None:intergenic |
| GTTACAAATCCATAATGCGA+AGG | 0.615721 | 6.3:-34882531 | MS.gene73726:CDS |
| CTGCAACCACGTAATTACTC+GGG | 0.626596 | 6.3:+34883053 | None:intergenic |
| AGTTTGCATAAATGCTTGCG+AGG | 0.629904 | 6.3:+34882743 | None:intergenic |
| AGATCATGTTAGGTTTCGTG+TGG | 0.631367 | 6.3:-34883440 | MS.gene73726:CDS |
| AAATTGGTAAAGATTGACTA+CGG | 0.637052 | 6.3:+34882498 | None:intergenic |
| TGTAATCGGGTCATCAGACA+AGG | 0.645501 | 6.3:+34883078 | None:intergenic |
| CCACCAATGCAAGCCAACCA+TGG | 0.665097 | 6.3:+34883191 | None:intergenic |
| TACAAGCCCGAGTAATTACG+TGG | 0.694443 | 6.3:-34883059 | MS.gene73726:CDS |
| ATTGACCGGAGACCTATGGA+TGG | 0.696827 | 6.3:-34882786 | MS.gene73726:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTTATTTAATTTACGA+TGG | - | chr6.3:34883387-34883406 | MS.gene73726:CDS | 15.0% |
| !! | ACCATAAAAATCATCAATTT+AGG | - | chr6.3:34882578-34882597 | MS.gene73726:CDS | 20.0% |
| !!! | AACATTTTATTTGTTGGAAT+CGG | - | chr6.3:34883315-34883334 | MS.gene73726:CDS | 20.0% |
| !!! | ACTGATGTTGTATTTTATAA+AGG | - | chr6.3:34883012-34883031 | MS.gene73726:CDS | 20.0% |
| !!! | GAAAACAACATTTTATTTGT+TGG | - | chr6.3:34883309-34883328 | MS.gene73726:CDS | 20.0% |
| !!! | TCCTAAATTGATGATTTTTA+TGG | + | chr6.3:34882582-34882601 | None:intergenic | 20.0% |
| ! | AAATTGGTAAAGATTGACTA+CGG | + | chr6.3:34883464-34883483 | None:intergenic | 25.0% |
| ! | TATGAGAATTATTGTATGAG+AGG | + | chr6.3:34882630-34882649 | None:intergenic | 25.0% |
| ! | TTTCCAGAACAATATCATTA+TGG | - | chr6.3:34883126-34883145 | MS.gene73726:CDS | 25.0% |
| !! | AATTGAATCCTTTTCAAACT+TGG | + | chr6.3:34883373-34883392 | None:intergenic | 25.0% |
| !! | ATTGAATCCTTTTCAAACTT+GGG | + | chr6.3:34883372-34883391 | None:intergenic | 25.0% |
| !! | TATTTTGTGAAATCATTGAC+CGG | - | chr6.3:34883159-34883178 | MS.gene73726:CDS | 25.0% |
| AAGAACACATAGATCATGTT+AGG | - | chr6.3:34882509-34882528 | MS.gene73726:CDS | 30.0% | |
| AAGGATGGGATAATTGAATA+GGG | + | chr6.3:34882714-34882733 | None:intergenic | 30.0% | |
| CAAACTCTACGTTTACAAAT+TGG | - | chr6.3:34883233-34883252 | MS.gene73726:CDS | 30.0% | |
| CAGAACAATATCATTATGGA+GGG | - | chr6.3:34883130-34883149 | MS.gene73726:CDS | 30.0% | |
| TTTCAACATACTTGAGAGTT+TGG | - | chr6.3:34883287-34883306 | MS.gene73726:CDS | 30.0% | |
| ! | TATTTAATTTACGATGGCGA+TGG | - | chr6.3:34883393-34883412 | MS.gene73726:CDS | 30.0% |
| ! | TTGAATCCTTTTCAAACTTG+GGG | + | chr6.3:34883371-34883390 | None:intergenic | 30.0% |
| AAAAGGATTCGCTAGTGTTA+TGG | + | chr6.3:34882806-34882825 | None:intergenic | 35.0% | |
| AACTCTCCAATCTGTTTACA+AGG | - | chr6.3:34882855-34882874 | MS.gene73726:CDS | 35.0% | |
| AATGAAATGACGGTGTGTTT+GGG | - | chr6.3:34882739-34882758 | MS.gene73726:CDS | 35.0% | |
| AGGTAACCTTGTAAACAGAT+TGG | + | chr6.3:34882864-34882883 | None:intergenic | 35.0% | |
| ATATCTGTTTACACGAATCC+AGG | + | chr6.3:34882980-34882999 | None:intergenic | 35.0% | |
| CATTTCATTGATGGAAGGAT+GGG | + | chr6.3:34882728-34882747 | None:intergenic | 35.0% | |
| CCAGAACAATATCATTATGG+AGG | - | chr6.3:34883129-34883148 | MS.gene73726:CDS | 35.0% | |
| CCTCCATAATGATATTGTTC+TGG | + | chr6.3:34883132-34883151 | None:intergenic | 35.0% | |
| CTACGTTTACAAATTGGAAC+TGG | - | chr6.3:34883239-34883258 | MS.gene73726:CDS | 35.0% | |
| CTTTACCAATTTCCTTCAAC+CGG | - | chr6.3:34883472-34883491 | MS.gene73726:CDS | 35.0% | |
| GAAGGATGGGATAATTGAAT+AGG | + | chr6.3:34882715-34882734 | None:intergenic | 35.0% | |
| GGAGCTACACTATACTTAAA+AGG | + | chr6.3:34882823-34882842 | None:intergenic | 35.0% | |
| GGTTCTACCACAATTTCAAT+GGG | - | chr6.3:34883509-34883528 | MS.gene73726:CDS | 35.0% | |
| GTAGATTGGGCAAATTTAGA+AGG | - | chr6.3:34882454-34882473 | MS.gene73726:CDS | 35.0% | |
| GTTACAAATCCATAATGCGA+AGG | - | chr6.3:34883428-34883447 | MS.gene73726:CDS | 35.0% | |
| TAATTACTCGGGCTTGTAAT+CGG | + | chr6.3:34882898-34882917 | None:intergenic | 35.0% | |
| TATGAGAGGATCATCAACAT+AGG | + | chr6.3:34882616-34882635 | None:intergenic | 35.0% | |
| TCATTTCATTGATGGAAGGA+TGG | + | chr6.3:34882729-34882748 | None:intergenic | 35.0% | |
| TCCTTCCATCAATGAAATGA+CGG | - | chr6.3:34882729-34882748 | MS.gene73726:CDS | 35.0% | |
| TGGATTCGTGTAAACAGATA+TGG | - | chr6.3:34882979-34882998 | MS.gene73726:CDS | 35.0% | |
| TTCTCAAGAACCAAACTAAG+AGG | + | chr6.3:34882484-34882503 | None:intergenic | 35.0% | |
| TTGTAAACAGATTGGAGAGT+TGG | + | chr6.3:34882856-34882875 | None:intergenic | 35.0% | |
| TTGTTTCCCCAAGTTTGAAA+AGG | - | chr6.3:34883362-34883381 | MS.gene73726:CDS | 35.0% | |
| ! | AACATCTTTTCACCATCCAT+AGG | + | chr6.3:34883188-34883207 | None:intergenic | 35.0% |
| !! | AAAGGTCTGATATTTGCTGT+TGG | - | chr6.3:34883030-34883049 | MS.gene73726:CDS | 35.0% |
| !! | TAGTTTGGTTCTTGAGAAGT+TGG | - | chr6.3:34882486-34882505 | MS.gene73726:CDS | 35.0% |
| AAAGAGCAAGTCAATCATCC+TGG | - | chr6.3:34882959-34882978 | MS.gene73726:CDS | 40.0% | |
| AACTTCCATCCTTCGCATTA+TGG | + | chr6.3:34883440-34883459 | None:intergenic | 40.0% | |
| AATTACTCGGGCTTGTAATC+GGG | + | chr6.3:34882897-34882916 | None:intergenic | 40.0% | |
| ACACACCGTCATTTCATTGA+TGG | + | chr6.3:34882737-34882756 | None:intergenic | 40.0% | |
| ACCGTCATTTCATTGATGGA+AGG | + | chr6.3:34882733-34882752 | None:intergenic | 40.0% | |
| AGAAGGTCTACCTCTTAGTT+TGG | - | chr6.3:34882471-34882490 | MS.gene73726:CDS | 40.0% | |
| AGAGGATCATCAACATAGGA+TGG | + | chr6.3:34882612-34882631 | None:intergenic | 40.0% | |
| AGATCATGTTAGGTTTCGTG+TGG | - | chr6.3:34882519-34882538 | MS.gene73726:CDS | 40.0% | |
| AGTACTAGCCATCTCATAAC+AGG | + | chr6.3:34883097-34883116 | None:intergenic | 40.0% | |
| AGTTTGCATAAATGCTTGCG+AGG | + | chr6.3:34883219-34883238 | None:intergenic | 40.0% | |
| CAAATCCATAATGCGAAGGA+TGG | - | chr6.3:34883432-34883451 | MS.gene73726:CDS | 40.0% | |
| CAATATCATTATGGAGGGCA+TGG | - | chr6.3:34883135-34883154 | MS.gene73726:CDS | 40.0% | |
| CAATGAAATGACGGTGTGTT+TGG | - | chr6.3:34882738-34882757 | MS.gene73726:CDS | 40.0% | |
| CAATTCTGCCTGTTATGAGA+TGG | - | chr6.3:34883086-34883105 | MS.gene73726:CDS | 40.0% | |
| GGGTTCTACCACAATTTCAA+TGG | - | chr6.3:34883508-34883527 | MS.gene73726:CDS | 40.0% | |
| GTTGAACCCGAAGCTTAAAA+TGG | + | chr6.3:34883067-34883086 | None:intergenic | 40.0% | |
| GTTGCAGCGATTTACAATTG+TGG | - | chr6.3:34882922-34882941 | MS.gene73726:CDS | 40.0% | |
| TTCAAACTTGGGGAAACAAG+AGG | + | chr6.3:34883361-34883380 | None:intergenic | 40.0% | |
| ! | GAGACACCATTTTAAGCTTC+GGG | - | chr6.3:34883058-34883077 | MS.gene73726:CDS | 40.0% |
| ! | GGAGACACCATTTTAAGCTT+CGG | - | chr6.3:34883057-34883076 | MS.gene73726:CDS | 40.0% |
| !! | CTGATATTTGCTGTTGGCAA+CGG | - | chr6.3:34883036-34883055 | MS.gene73726:CDS | 40.0% |
| AAGATGTGACATCCGGTTGA+AGG | + | chr6.3:34883487-34883506 | None:intergenic | 45.0% | |
| AATCATTGACCGGAGACCTA+TGG | - | chr6.3:34883169-34883188 | MS.gene73726:CDS | 45.0% | |
| CAACCGGATGTCACATCTTT+GGG | - | chr6.3:34883488-34883507 | MS.gene73726:CDS | 45.0% | |
| CTGCAACCACGTAATTACTC+GGG | + | chr6.3:34882909-34882928 | None:intergenic | 45.0% | |
| GAACCCAAAGATGTGACATC+CGG | + | chr6.3:34883494-34883513 | None:intergenic | 45.0% | |
| GACATCCGGTTGAAGGAAAT+TGG | + | chr6.3:34883480-34883499 | None:intergenic | 45.0% | |
| GCTGCAACCACGTAATTACT+CGG | + | chr6.3:34882910-34882929 | None:intergenic | 45.0% | |
| TACAAGCCCGAGTAATTACG+TGG | - | chr6.3:34882900-34882919 | MS.gene73726:CDS | 45.0% | |
| TCAACCGGATGTCACATCTT+TGG | - | chr6.3:34883487-34883506 | MS.gene73726:CDS | 45.0% | |
| TGGAGAGTTGGCAGACTAAT+GGG | + | chr6.3:34882844-34882863 | None:intergenic | 45.0% | |
| TGTAATCGGGTCATCAGACA+AGG | + | chr6.3:34882884-34882903 | None:intergenic | 45.0% | |
| TTGGAGAGTTGGCAGACTAA+TGG | + | chr6.3:34882845-34882864 | None:intergenic | 45.0% | |
| TTTCACCATCCATAGGTCTC+CGG | + | chr6.3:34883181-34883200 | None:intergenic | 45.0% | |
| AACTTGGGGAAACAAGAGGC+TGG | + | chr6.3:34883357-34883376 | None:intergenic | 50.0% | |
| ATTGACCGGAGACCTATGGA+TGG | - | chr6.3:34883173-34883192 | MS.gene73726:CDS | 50.0% | |
| TTCGTGTGGTGTGCAAGACT+TGG | - | chr6.3:34882533-34882552 | MS.gene73726:CDS | 50.0% | |
| TTGGAACTGGACGCTATGAG+TGG | - | chr6.3:34883252-34883271 | MS.gene73726:CDS | 50.0% | |
| !! | TAGCCATGGTTGGCTTGCAT+TGG | - | chr6.3:34882765-34882784 | MS.gene73726:CDS | 50.0% |
| CCACCAATGCAAGCCAACCA+TGG | + | chr6.3:34882771-34882790 | None:intergenic | 55.0% | |
| GTGTGTTTGGGCGTTAGCCA+TGG | - | chr6.3:34882751-34882770 | MS.gene73726:CDS | 55.0% | |
| GTTTGGGCGTTAGCCATGGT+TGG | - | chr6.3:34882755-34882774 | MS.gene73726:CDS | 55.0% | |
| !! | CCATGGTTGGCTTGCATTGG+TGG | - | chr6.3:34882768-34882787 | MS.gene73726:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 34882445 | 34883536 | 34882445 | ID=MS.gene73726 |
| chr6.3 | mRNA | 34882445 | 34883536 | 34882445 | ID=MS.gene73726.t1;Parent=MS.gene73726 |
| chr6.3 | exon | 34882445 | 34883536 | 34882445 | ID=MS.gene73726.t1.exon1;Parent=MS.gene73726.t1 |
| chr6.3 | CDS | 34882445 | 34883536 | 34882445 | ID=cds.MS.gene73726.t1;Parent=MS.gene73726.t1 |
| Gene Sequence |
| Protein sequence |