Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73726.t1 | RHN46952.1 | 68.7 | 371 | 103 | 3 | 1 | 360 | 1 | 369 | 2.00E-132 | 482.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73726.t1 | G7L4M6 | 68.7 | 371 | 103 | 3 | 1 | 360 | 1 | 369 | 1.5e-132 | 482.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73726.t1 | MTR_7g077620 | 68.548 | 372 | 104 | 3 | 1 | 361 | 1 | 370 | 1.15e-173 | 488 |
MS.gene73726.t1 | MTR_7g077650 | 64.737 | 380 | 109 | 10 | 1 | 363 | 1 | 372 | 6.97e-154 | 437 |
MS.gene73726.t1 | MTR_7g077660 | 62.069 | 377 | 120 | 10 | 1 | 363 | 1 | 368 | 1.93e-145 | 416 |
MS.gene73726.t1 | MTR_1g108740 | 43.935 | 371 | 171 | 15 | 1 | 361 | 1 | 344 | 3.80e-83 | 256 |
MS.gene73726.t1 | MTR_7g076110 | 48.475 | 295 | 131 | 6 | 87 | 363 | 22 | 313 | 6.35e-79 | 244 |
MS.gene73726.t1 | MTR_7g076100 | 56.962 | 237 | 90 | 3 | 138 | 363 | 65 | 300 | 7.13e-79 | 244 |
MS.gene73726.t1 | MTR_7g076100 | 78.182 | 55 | 10 | 2 | 1 | 54 | 1 | 54 | 7.17e-19 | 86.3 |
MS.gene73726.t1 | MTR_5g038260 | 40.100 | 399 | 182 | 15 | 3 | 363 | 4 | 383 | 1.79e-71 | 228 |
MS.gene73726.t1 | MTR_1g064570 | 39.379 | 419 | 176 | 17 | 3 | 363 | 2 | 400 | 1.43e-69 | 223 |
MS.gene73726.t1 | MTR_5g082770 | 45.902 | 305 | 132 | 9 | 5 | 296 | 4 | 288 | 3.96e-68 | 216 |
MS.gene73726.t1 | MTR_5g038230 | 40.052 | 387 | 165 | 15 | 5 | 361 | 4 | 353 | 3.01e-67 | 216 |
MS.gene73726.t1 | MTR_1g016150 | 48.744 | 199 | 95 | 6 | 1 | 196 | 1 | 195 | 4.78e-51 | 170 |
MS.gene73726.t1 | MTR_5g082780 | 42.396 | 217 | 101 | 8 | 115 | 317 | 1 | 207 | 5.07e-34 | 125 |
MS.gene73726.t1 | MTR_7g076130 | 50.000 | 130 | 50 | 5 | 169 | 284 | 25 | 153 | 3.41e-26 | 102 |
MS.gene73726.t1 | MTR_1g108750 | 43.949 | 157 | 51 | 7 | 5 | 160 | 4 | 124 | 5.37e-22 | 90.5 |
MS.gene73726.t1 | MTR_3g114990 | 26.289 | 388 | 202 | 17 | 4 | 340 | 22 | 376 | 1.76e-15 | 77.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 80 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAACTCTACGTTTACAAAT+TGG | 0.205980 | 6.3:-34882726 | MS.gene73726:CDS |
AACTTCCATCCTTCGCATTA+TGG | 0.220578 | 6.3:+34882522 | None:intergenic |
TTTCAACATACTTGAGAGTT+TGG | 0.271304 | 6.3:-34882672 | MS.gene73726:CDS |
CAACCGGATGTCACATCTTT+GGG | 0.283463 | 6.3:-34882471 | MS.gene73726:CDS |
TAATTACTCGGGCTTGTAAT+CGG | 0.293843 | 6.3:+34883064 | None:intergenic |
GTTGAACCCGAAGCTTAAAA+TGG | 0.296182 | 6.3:+34882895 | None:intergenic |
TCAACCGGATGTCACATCTT+TGG | 0.300744 | 6.3:-34882472 | MS.gene73726:CDS |
TTTCCAGAACAATATCATTA+TGG | 0.309110 | 6.3:-34882833 | MS.gene73726:CDS |
GGAGCTACACTATACTTAAA+AGG | 0.314471 | 6.3:+34883139 | None:intergenic |
GACATCCGGTTGAAGGAAAT+TGG | 0.322776 | 6.3:+34882482 | None:intergenic |
CAATGAAATGACGGTGTGTT+TGG | 0.335412 | 6.3:-34883221 | MS.gene73726:CDS |
GAAGGATGGGATAATTGAAT+AGG | 0.335830 | 6.3:+34883247 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 6.3:-34883450 | MS.gene73726:CDS |
AAAAGGATTCGCTAGTGTTA+TGG | 0.360726 | 6.3:+34883156 | None:intergenic |
ACACACCGTCATTTCATTGA+TGG | 0.365745 | 6.3:+34883225 | None:intergenic |
TGGATTCGTGTAAACAGATA+TGG | 0.378525 | 6.3:-34882980 | MS.gene73726:CDS |
AGAAGGTCTACCTCTTAGTT+TGG | 0.383875 | 6.3:-34883488 | MS.gene73726:CDS |
CTACGTTTACAAATTGGAAC+TGG | 0.389715 | 6.3:-34882720 | MS.gene73726:CDS |
CTTTACCAATTTCCTTCAAC+CGG | 0.393860 | 6.3:-34882487 | MS.gene73726:CDS |
CCATGGTTGGCTTGCATTGG+TGG | 0.402911 | 6.3:-34883191 | MS.gene73726:CDS |
TTGGAGAGTTGGCAGACTAA+TGG | 0.403671 | 6.3:+34883117 | None:intergenic |
GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 6.3:-34882451 | MS.gene73726:CDS |
AGGCAATGAGGAAGGTAGAT+TGG | 0.421191 | 6.3:-34883519 | None:intergenic |
CCTCCATAATGATATTGTTC+TGG | 0.422685 | 6.3:+34882830 | None:intergenic |
AATTACTCGGGCTTGTAATC+GGG | 0.426509 | 6.3:+34883065 | None:intergenic |
TGGAGAGTTGGCAGACTAAT+GGG | 0.429349 | 6.3:+34883118 | None:intergenic |
AGTACTAGCCATCTCATAAC+AGG | 0.432398 | 6.3:+34882865 | None:intergenic |
GTAGATTGGGCAAATTTAGA+AGG | 0.435773 | 6.3:-34883505 | MS.gene73726:CDS |
AATGAAATGACGGTGTGTTT+GGG | 0.468609 | 6.3:-34883220 | MS.gene73726:CDS |
GGCAATGAGGAAGGTAGATT+GGG | 0.471328 | 6.3:-34883518 | None:intergenic |
TAGTTTGGTTCTTGAGAAGT+TGG | 0.473111 | 6.3:-34883473 | MS.gene73726:CDS |
AAGGATGGGATAATTGAATA+GGG | 0.479464 | 6.3:+34883248 | None:intergenic |
TTGTTTCCCCAAGTTTGAAA+AGG | 0.479995 | 6.3:-34882597 | MS.gene73726:CDS |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 6.3:-34882450 | MS.gene73726:CDS |
AACTCTCCAATCTGTTTACA+AGG | 0.481694 | 6.3:-34883104 | MS.gene73726:CDS |
TAGCCATGGTTGGCTTGCAT+TGG | 0.484269 | 6.3:-34883194 | MS.gene73726:CDS |
TTCTCAAGAACCAAACTAAG+AGG | 0.491952 | 6.3:+34883478 | None:intergenic |
CTGATATTTGCTGTTGGCAA+CGG | 0.495311 | 6.3:-34882923 | MS.gene73726:CDS |
TCATTTCATTGATGGAAGGA+TGG | 0.502472 | 6.3:+34883233 | None:intergenic |
AAGATGTGACATCCGGTTGA+AGG | 0.515408 | 6.3:+34882475 | None:intergenic |
CAATATCATTATGGAGGGCA+TGG | 0.528364 | 6.3:-34882824 | MS.gene73726:CDS |
GATCAATCCCATTGAAATTG+TGG | 0.531759 | 6.3:+34882443 | None:intergenic |
AATCATTGACCGGAGACCTA+TGG | 0.532480 | 6.3:-34882790 | MS.gene73726:CDS |
CCAGAACAATATCATTATGG+AGG | 0.533728 | 6.3:-34882830 | MS.gene73726:CDS |
AAAGAGCAAGTCAATCATCC+TGG | 0.535979 | 6.3:-34883000 | MS.gene73726:CDS |
GTGTGTTTGGGCGTTAGCCA+TGG | 0.536708 | 6.3:-34883208 | MS.gene73726:CDS |
TTTCACCATCCATAGGTCTC+CGG | 0.537035 | 6.3:+34882781 | None:intergenic |
CAAATCCATAATGCGAAGGA+TGG | 0.537880 | 6.3:-34882527 | MS.gene73726:CDS |
TTGTAAACAGATTGGAGAGT+TGG | 0.542514 | 6.3:+34883106 | None:intergenic |
ATATCTGTTTACACGAATCC+AGG | 0.545308 | 6.3:+34882982 | None:intergenic |
AAAGGTCTGATATTTGCTGT+TGG | 0.547450 | 6.3:-34882929 | MS.gene73726:CDS |
CATTTCATTGATGGAAGGAT+GGG | 0.554300 | 6.3:+34883234 | None:intergenic |
GTTTGGGCGTTAGCCATGGT+TGG | 0.554659 | 6.3:-34883204 | MS.gene73726:CDS |
AGGTAACCTTGTAAACAGAT+TGG | 0.555212 | 6.3:+34883098 | None:intergenic |
TATTTAATTTACGATGGCGA+TGG | 0.560307 | 6.3:-34882566 | MS.gene73726:CDS |
GAACCCAAAGATGTGACATC+CGG | 0.561035 | 6.3:+34882468 | None:intergenic |
TTCGTGTGGTGTGCAAGACT+TGG | 0.561436 | 6.3:-34883426 | MS.gene73726:CDS |
TTCAAACTTGGGGAAACAAG+AGG | 0.563350 | 6.3:+34882601 | None:intergenic |
TCAATTTATTTAATTTACGA+TGG | 0.567180 | 6.3:-34882572 | MS.gene73726:CDS |
CAGAACAATATCATTATGGA+GGG | 0.569165 | 6.3:-34882829 | MS.gene73726:CDS |
CAATTCTGCCTGTTATGAGA+TGG | 0.570742 | 6.3:-34882873 | MS.gene73726:CDS |
GTTGCAGCGATTTACAATTG+TGG | 0.573110 | 6.3:-34883037 | MS.gene73726:CDS |
GCTGCAACCACGTAATTACT+CGG | 0.580071 | 6.3:+34883052 | None:intergenic |
AGAGGATCATCAACATAGGA+TGG | 0.580233 | 6.3:+34883350 | None:intergenic |
TATGAGAATTATTGTATGAG+AGG | 0.586159 | 6.3:+34883332 | None:intergenic |
TCCTTCCATCAATGAAATGA+CGG | 0.587156 | 6.3:-34883230 | MS.gene73726:CDS |
ACCGTCATTTCATTGATGGA+AGG | 0.592100 | 6.3:+34883229 | None:intergenic |
ATTATGATAGGCAATGAGGA+AGG | 0.609073 | 6.3:-34883527 | None:intergenic |
AACTTGGGGAAACAAGAGGC+TGG | 0.613015 | 6.3:+34882605 | None:intergenic |
TTGGAACTGGACGCTATGAG+TGG | 0.614160 | 6.3:-34882707 | MS.gene73726:CDS |
TATGAGAGGATCATCAACAT+AGG | 0.615056 | 6.3:+34883346 | None:intergenic |
GTTACAAATCCATAATGCGA+AGG | 0.615721 | 6.3:-34882531 | MS.gene73726:CDS |
CTGCAACCACGTAATTACTC+GGG | 0.626596 | 6.3:+34883053 | None:intergenic |
AGTTTGCATAAATGCTTGCG+AGG | 0.629904 | 6.3:+34882743 | None:intergenic |
AGATCATGTTAGGTTTCGTG+TGG | 0.631367 | 6.3:-34883440 | MS.gene73726:CDS |
AAATTGGTAAAGATTGACTA+CGG | 0.637052 | 6.3:+34882498 | None:intergenic |
TGTAATCGGGTCATCAGACA+AGG | 0.645501 | 6.3:+34883078 | None:intergenic |
CCACCAATGCAAGCCAACCA+TGG | 0.665097 | 6.3:+34883191 | None:intergenic |
TACAAGCCCGAGTAATTACG+TGG | 0.694443 | 6.3:-34883059 | MS.gene73726:CDS |
ATTGACCGGAGACCTATGGA+TGG | 0.696827 | 6.3:-34882786 | MS.gene73726:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAATTTATTTAATTTACGA+TGG | - | chr6.3:34883387-34883406 | MS.gene73726:CDS | 15.0% |
!! | ACCATAAAAATCATCAATTT+AGG | - | chr6.3:34882578-34882597 | MS.gene73726:CDS | 20.0% |
!!! | AACATTTTATTTGTTGGAAT+CGG | - | chr6.3:34883315-34883334 | MS.gene73726:CDS | 20.0% |
!!! | ACTGATGTTGTATTTTATAA+AGG | - | chr6.3:34883012-34883031 | MS.gene73726:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTGT+TGG | - | chr6.3:34883309-34883328 | MS.gene73726:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | + | chr6.3:34882582-34882601 | None:intergenic | 20.0% |
! | AAATTGGTAAAGATTGACTA+CGG | + | chr6.3:34883464-34883483 | None:intergenic | 25.0% |
! | TATGAGAATTATTGTATGAG+AGG | + | chr6.3:34882630-34882649 | None:intergenic | 25.0% |
! | TTTCCAGAACAATATCATTA+TGG | - | chr6.3:34883126-34883145 | MS.gene73726:CDS | 25.0% |
!! | AATTGAATCCTTTTCAAACT+TGG | + | chr6.3:34883373-34883392 | None:intergenic | 25.0% |
!! | ATTGAATCCTTTTCAAACTT+GGG | + | chr6.3:34883372-34883391 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+CGG | - | chr6.3:34883159-34883178 | MS.gene73726:CDS | 25.0% |
AAGAACACATAGATCATGTT+AGG | - | chr6.3:34882509-34882528 | MS.gene73726:CDS | 30.0% | |
AAGGATGGGATAATTGAATA+GGG | + | chr6.3:34882714-34882733 | None:intergenic | 30.0% | |
CAAACTCTACGTTTACAAAT+TGG | - | chr6.3:34883233-34883252 | MS.gene73726:CDS | 30.0% | |
CAGAACAATATCATTATGGA+GGG | - | chr6.3:34883130-34883149 | MS.gene73726:CDS | 30.0% | |
TTTCAACATACTTGAGAGTT+TGG | - | chr6.3:34883287-34883306 | MS.gene73726:CDS | 30.0% | |
! | TATTTAATTTACGATGGCGA+TGG | - | chr6.3:34883393-34883412 | MS.gene73726:CDS | 30.0% |
! | TTGAATCCTTTTCAAACTTG+GGG | + | chr6.3:34883371-34883390 | None:intergenic | 30.0% |
AAAAGGATTCGCTAGTGTTA+TGG | + | chr6.3:34882806-34882825 | None:intergenic | 35.0% | |
AACTCTCCAATCTGTTTACA+AGG | - | chr6.3:34882855-34882874 | MS.gene73726:CDS | 35.0% | |
AATGAAATGACGGTGTGTTT+GGG | - | chr6.3:34882739-34882758 | MS.gene73726:CDS | 35.0% | |
AGGTAACCTTGTAAACAGAT+TGG | + | chr6.3:34882864-34882883 | None:intergenic | 35.0% | |
ATATCTGTTTACACGAATCC+AGG | + | chr6.3:34882980-34882999 | None:intergenic | 35.0% | |
CATTTCATTGATGGAAGGAT+GGG | + | chr6.3:34882728-34882747 | None:intergenic | 35.0% | |
CCAGAACAATATCATTATGG+AGG | - | chr6.3:34883129-34883148 | MS.gene73726:CDS | 35.0% | |
CCTCCATAATGATATTGTTC+TGG | + | chr6.3:34883132-34883151 | None:intergenic | 35.0% | |
CTACGTTTACAAATTGGAAC+TGG | - | chr6.3:34883239-34883258 | MS.gene73726:CDS | 35.0% | |
CTTTACCAATTTCCTTCAAC+CGG | - | chr6.3:34883472-34883491 | MS.gene73726:CDS | 35.0% | |
GAAGGATGGGATAATTGAAT+AGG | + | chr6.3:34882715-34882734 | None:intergenic | 35.0% | |
GGAGCTACACTATACTTAAA+AGG | + | chr6.3:34882823-34882842 | None:intergenic | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr6.3:34883509-34883528 | MS.gene73726:CDS | 35.0% | |
GTAGATTGGGCAAATTTAGA+AGG | - | chr6.3:34882454-34882473 | MS.gene73726:CDS | 35.0% | |
GTTACAAATCCATAATGCGA+AGG | - | chr6.3:34883428-34883447 | MS.gene73726:CDS | 35.0% | |
TAATTACTCGGGCTTGTAAT+CGG | + | chr6.3:34882898-34882917 | None:intergenic | 35.0% | |
TATGAGAGGATCATCAACAT+AGG | + | chr6.3:34882616-34882635 | None:intergenic | 35.0% | |
TCATTTCATTGATGGAAGGA+TGG | + | chr6.3:34882729-34882748 | None:intergenic | 35.0% | |
TCCTTCCATCAATGAAATGA+CGG | - | chr6.3:34882729-34882748 | MS.gene73726:CDS | 35.0% | |
TGGATTCGTGTAAACAGATA+TGG | - | chr6.3:34882979-34882998 | MS.gene73726:CDS | 35.0% | |
TTCTCAAGAACCAAACTAAG+AGG | + | chr6.3:34882484-34882503 | None:intergenic | 35.0% | |
TTGTAAACAGATTGGAGAGT+TGG | + | chr6.3:34882856-34882875 | None:intergenic | 35.0% | |
TTGTTTCCCCAAGTTTGAAA+AGG | - | chr6.3:34883362-34883381 | MS.gene73726:CDS | 35.0% | |
! | AACATCTTTTCACCATCCAT+AGG | + | chr6.3:34883188-34883207 | None:intergenic | 35.0% |
!! | AAAGGTCTGATATTTGCTGT+TGG | - | chr6.3:34883030-34883049 | MS.gene73726:CDS | 35.0% |
!! | TAGTTTGGTTCTTGAGAAGT+TGG | - | chr6.3:34882486-34882505 | MS.gene73726:CDS | 35.0% |
AAAGAGCAAGTCAATCATCC+TGG | - | chr6.3:34882959-34882978 | MS.gene73726:CDS | 40.0% | |
AACTTCCATCCTTCGCATTA+TGG | + | chr6.3:34883440-34883459 | None:intergenic | 40.0% | |
AATTACTCGGGCTTGTAATC+GGG | + | chr6.3:34882897-34882916 | None:intergenic | 40.0% | |
ACACACCGTCATTTCATTGA+TGG | + | chr6.3:34882737-34882756 | None:intergenic | 40.0% | |
ACCGTCATTTCATTGATGGA+AGG | + | chr6.3:34882733-34882752 | None:intergenic | 40.0% | |
AGAAGGTCTACCTCTTAGTT+TGG | - | chr6.3:34882471-34882490 | MS.gene73726:CDS | 40.0% | |
AGAGGATCATCAACATAGGA+TGG | + | chr6.3:34882612-34882631 | None:intergenic | 40.0% | |
AGATCATGTTAGGTTTCGTG+TGG | - | chr6.3:34882519-34882538 | MS.gene73726:CDS | 40.0% | |
AGTACTAGCCATCTCATAAC+AGG | + | chr6.3:34883097-34883116 | None:intergenic | 40.0% | |
AGTTTGCATAAATGCTTGCG+AGG | + | chr6.3:34883219-34883238 | None:intergenic | 40.0% | |
CAAATCCATAATGCGAAGGA+TGG | - | chr6.3:34883432-34883451 | MS.gene73726:CDS | 40.0% | |
CAATATCATTATGGAGGGCA+TGG | - | chr6.3:34883135-34883154 | MS.gene73726:CDS | 40.0% | |
CAATGAAATGACGGTGTGTT+TGG | - | chr6.3:34882738-34882757 | MS.gene73726:CDS | 40.0% | |
CAATTCTGCCTGTTATGAGA+TGG | - | chr6.3:34883086-34883105 | MS.gene73726:CDS | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr6.3:34883508-34883527 | MS.gene73726:CDS | 40.0% | |
GTTGAACCCGAAGCTTAAAA+TGG | + | chr6.3:34883067-34883086 | None:intergenic | 40.0% | |
GTTGCAGCGATTTACAATTG+TGG | - | chr6.3:34882922-34882941 | MS.gene73726:CDS | 40.0% | |
TTCAAACTTGGGGAAACAAG+AGG | + | chr6.3:34883361-34883380 | None:intergenic | 40.0% | |
! | GAGACACCATTTTAAGCTTC+GGG | - | chr6.3:34883058-34883077 | MS.gene73726:CDS | 40.0% |
! | GGAGACACCATTTTAAGCTT+CGG | - | chr6.3:34883057-34883076 | MS.gene73726:CDS | 40.0% |
!! | CTGATATTTGCTGTTGGCAA+CGG | - | chr6.3:34883036-34883055 | MS.gene73726:CDS | 40.0% |
AAGATGTGACATCCGGTTGA+AGG | + | chr6.3:34883487-34883506 | None:intergenic | 45.0% | |
AATCATTGACCGGAGACCTA+TGG | - | chr6.3:34883169-34883188 | MS.gene73726:CDS | 45.0% | |
CAACCGGATGTCACATCTTT+GGG | - | chr6.3:34883488-34883507 | MS.gene73726:CDS | 45.0% | |
CTGCAACCACGTAATTACTC+GGG | + | chr6.3:34882909-34882928 | None:intergenic | 45.0% | |
GAACCCAAAGATGTGACATC+CGG | + | chr6.3:34883494-34883513 | None:intergenic | 45.0% | |
GACATCCGGTTGAAGGAAAT+TGG | + | chr6.3:34883480-34883499 | None:intergenic | 45.0% | |
GCTGCAACCACGTAATTACT+CGG | + | chr6.3:34882910-34882929 | None:intergenic | 45.0% | |
TACAAGCCCGAGTAATTACG+TGG | - | chr6.3:34882900-34882919 | MS.gene73726:CDS | 45.0% | |
TCAACCGGATGTCACATCTT+TGG | - | chr6.3:34883487-34883506 | MS.gene73726:CDS | 45.0% | |
TGGAGAGTTGGCAGACTAAT+GGG | + | chr6.3:34882844-34882863 | None:intergenic | 45.0% | |
TGTAATCGGGTCATCAGACA+AGG | + | chr6.3:34882884-34882903 | None:intergenic | 45.0% | |
TTGGAGAGTTGGCAGACTAA+TGG | + | chr6.3:34882845-34882864 | None:intergenic | 45.0% | |
TTTCACCATCCATAGGTCTC+CGG | + | chr6.3:34883181-34883200 | None:intergenic | 45.0% | |
AACTTGGGGAAACAAGAGGC+TGG | + | chr6.3:34883357-34883376 | None:intergenic | 50.0% | |
ATTGACCGGAGACCTATGGA+TGG | - | chr6.3:34883173-34883192 | MS.gene73726:CDS | 50.0% | |
TTCGTGTGGTGTGCAAGACT+TGG | - | chr6.3:34882533-34882552 | MS.gene73726:CDS | 50.0% | |
TTGGAACTGGACGCTATGAG+TGG | - | chr6.3:34883252-34883271 | MS.gene73726:CDS | 50.0% | |
!! | TAGCCATGGTTGGCTTGCAT+TGG | - | chr6.3:34882765-34882784 | MS.gene73726:CDS | 50.0% |
CCACCAATGCAAGCCAACCA+TGG | + | chr6.3:34882771-34882790 | None:intergenic | 55.0% | |
GTGTGTTTGGGCGTTAGCCA+TGG | - | chr6.3:34882751-34882770 | MS.gene73726:CDS | 55.0% | |
GTTTGGGCGTTAGCCATGGT+TGG | - | chr6.3:34882755-34882774 | MS.gene73726:CDS | 55.0% | |
!! | CCATGGTTGGCTTGCATTGG+TGG | - | chr6.3:34882768-34882787 | MS.gene73726:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 34882445 | 34883536 | 34882445 | ID=MS.gene73726 |
chr6.3 | mRNA | 34882445 | 34883536 | 34882445 | ID=MS.gene73726.t1;Parent=MS.gene73726 |
chr6.3 | exon | 34882445 | 34883536 | 34882445 | ID=MS.gene73726.t1.exon1;Parent=MS.gene73726.t1 |
chr6.3 | CDS | 34882445 | 34883536 | 34882445 | ID=cds.MS.gene73726.t1;Parent=MS.gene73726.t1 |
Gene Sequence |
Protein sequence |