Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066289.t1 | XP_003613576.1 | 92.1 | 381 | 29 | 1 | 1 | 380 | 3 | 383 | 1.00E-214 | 755.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066289.t1 | Q3EBZ2 | 21.3 | 408 | 256 | 17 | 4 | 370 | 3 | 386 | 4.4e-09 | 63.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066289.t1 | G7K9R3 | 92.1 | 381 | 29 | 1 | 1 | 380 | 3 | 383 | 7.2e-215 | 755.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066289.t1 | MTR_5g038260 | 92.126 | 381 | 29 | 1 | 1 | 380 | 3 | 383 | 0.0 | 733 |
| MS.gene066289.t1 | MTR_5g038230 | 84.211 | 380 | 35 | 2 | 1 | 380 | 1 | 355 | 0.0 | 655 |
| MS.gene066289.t1 | MTR_1g064570 | 49.132 | 403 | 179 | 8 | 1 | 380 | 1 | 400 | 6.14e-127 | 371 |
| MS.gene066289.t1 | MTR_1g108740 | 45.431 | 383 | 162 | 11 | 2 | 378 | 3 | 344 | 8.47e-98 | 295 |
| MS.gene066289.t1 | MTR_5g082770 | 50.980 | 306 | 130 | 10 | 1 | 303 | 1 | 289 | 3.76e-87 | 265 |
| MS.gene066289.t1 | MTR_7g077620 | 42.000 | 400 | 171 | 16 | 4 | 377 | 5 | 369 | 7.45e-78 | 245 |
| MS.gene066289.t1 | MTR_7g077660 | 41.310 | 397 | 180 | 17 | 4 | 380 | 5 | 368 | 1.87e-76 | 241 |
| MS.gene066289.t1 | MTR_7g077650 | 39.259 | 405 | 181 | 18 | 4 | 380 | 5 | 372 | 6.44e-71 | 226 |
| MS.gene066289.t1 | MTR_5g082780 | 44.882 | 254 | 115 | 9 | 103 | 351 | 1 | 234 | 1.07e-54 | 180 |
| MS.gene066289.t1 | MTR_1g016150 | 45.503 | 189 | 78 | 7 | 2 | 177 | 3 | 179 | 1.01e-44 | 154 |
| MS.gene066289.t1 | MTR_1g016150 | 44.792 | 96 | 35 | 2 | 232 | 316 | 148 | 236 | 2.35e-13 | 69.7 |
| MS.gene066289.t1 | MTR_7g076110 | 37.658 | 316 | 162 | 13 | 77 | 380 | 21 | 313 | 1.12e-44 | 156 |
| MS.gene066289.t1 | MTR_7g076100 | 40.873 | 252 | 119 | 11 | 139 | 380 | 69 | 300 | 1.61e-38 | 140 |
| MS.gene066289.t1 | MTR_7g076100 | 58.000 | 50 | 20 | 1 | 4 | 53 | 6 | 54 | 2.49e-11 | 64.3 |
| MS.gene066289.t1 | MTR_1g108750 | 45.625 | 160 | 48 | 5 | 1 | 157 | 1 | 124 | 8.53e-27 | 103 |
| MS.gene066289.t1 | MTR_6g023955 | 48.673 | 113 | 50 | 2 | 112 | 217 | 40 | 151 | 2.96e-24 | 99.4 |
| MS.gene066289.t1 | MTR_6g023955 | 55.738 | 61 | 27 | 0 | 319 | 379 | 149 | 209 | 1.41e-18 | 84.0 |
| MS.gene066289.t1 | MTR_3g114990 | 26.683 | 416 | 236 | 16 | 1 | 375 | 20 | 407 | 9.65e-22 | 96.3 |
| MS.gene066289.t1 | MTR_3g114970 | 26.087 | 391 | 234 | 16 | 1 | 375 | 1 | 352 | 1.03e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 77 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTATATTGCTCCTAAAT+TGG | 0.217987 | 5.3:-26365440 | None:intergenic |
| CACTTGGGAGAATCCATTTA+AGG | 0.221530 | 5.3:+26365623 | MS.gene066289:CDS |
| ATACAAGACACTGACGATTT+TGG | 0.236582 | 5.3:+26365834 | MS.gene066289:CDS |
| TAATCATTTGGACTTGTTAT+AGG | 0.239358 | 5.3:-26365738 | None:intergenic |
| TGGTGAGAAGGTTTATAAAT+AGG | 0.247820 | 5.3:+26366054 | MS.gene066289:CDS |
| TAAAAGCAGGACAAGAGTTT+TGG | 0.281524 | 5.3:+26365805 | MS.gene066289:CDS |
| CTTCTTTGTAACAAAACATT+TGG | 0.292647 | 5.3:-26365969 | None:intergenic |
| TTAAGCATTGTCAATTCTAA+TGG | 0.317587 | 5.3:-26365537 | None:intergenic |
| ATAGGAGCAACATCCTTAAA+TGG | 0.322131 | 5.3:-26365636 | None:intergenic |
| GCCACCCATCGATAATTATA+TGG | 0.327281 | 5.3:+26365665 | MS.gene066289:CDS |
| TTGTCGAGACTTGAGAGTTT+AGG | 0.327611 | 5.3:+26366158 | MS.gene066289:CDS |
| AATGGATACACTCTATTTGC+AGG | 0.334507 | 5.3:-26365519 | None:intergenic |
| ATCAACACGATCACCAATTT+AGG | 0.336169 | 5.3:+26365427 | MS.gene066289:CDS |
| TTGAACCAATTGATCACATT+TGG | 0.344806 | 5.3:+26365358 | MS.gene066289:CDS |
| CCAATTGATCACATTTGGTT+TGG | 0.352054 | 5.3:+26365363 | MS.gene066289:CDS |
| TTCTTTACATGTATTTAAGT+TGG | 0.365055 | 5.3:+26366103 | MS.gene066289:CDS |
| CCCTTACAAATCTTACTTCA+AGG | 0.369173 | 5.3:+26366370 | MS.gene066289:CDS |
| TCGATGGGTGGCAAACTAAT+AGG | 0.371653 | 5.3:-26365654 | None:intergenic |
| GCATAACCATGGAGCGAGAT+TGG | 0.373158 | 5.3:+26365289 | None:intergenic |
| CCAAACCAAATGTGATCAAT+TGG | 0.396537 | 5.3:-26365363 | None:intergenic |
| GGTGAGAAGGTTTATAAATA+GGG | 0.399787 | 5.3:+26366055 | MS.gene066289:CDS |
| AACATAAAGCATGGAAGCTT+GGG | 0.400176 | 5.3:+26366338 | MS.gene066289:CDS |
| TACTTATTTAGTGAAATCAT+TGG | 0.416138 | 5.3:+26366016 | MS.gene066289:CDS |
| CATTACATTCTACAATGGTT+TGG | 0.419262 | 5.3:+26365866 | MS.gene066289:CDS |
| TTGTTGTTCAAGTGACCCTT+GGG | 0.420344 | 5.3:+26365932 | MS.gene066289:CDS |
| GCTGCAACCACATAATCATT+TGG | 0.420868 | 5.3:-26365750 | None:intergenic |
| TTTGTTGTTCAAGTGACCCT+TGG | 0.424584 | 5.3:+26365931 | MS.gene066289:CDS |
| AAAAGGTGGCACAACCCATA+TGG | 0.432547 | 5.3:-26366405 | None:intergenic |
| AGGGTATGACACCTCCCATA+TGG | 0.446486 | 5.3:+26366390 | MS.gene066289:CDS |
| CATAACCATGGAGCGAGATT+GGG | 0.451858 | 5.3:+26365290 | None:intergenic |
| TAACATAAAGCATGGAAGCT+TGG | 0.452049 | 5.3:+26366337 | MS.gene066289:CDS |
| TCTAATCAATTCCATTGAAA+AGG | 0.463896 | 5.3:-26366422 | None:intergenic |
| GAGAGTTGTGGATGGTGAGA+AGG | 0.464771 | 5.3:+26366042 | MS.gene066289:CDS |
| TCAAAAGGACCTCTAGGATA+AGG | 0.471573 | 5.3:-26366302 | None:intergenic |
| TTTCTCGAGTTATCTACAAA+AGG | 0.478188 | 5.3:+26366235 | MS.gene066289:CDS |
| CCCTTGAAGTAAGATTTGTA+AGG | 0.492529 | 5.3:-26366371 | None:intergenic |
| TTATATATTCCCATATCAAA+AGG | 0.502379 | 5.3:-26366317 | None:intergenic |
| TTCAAGTGACCCTTGGGGTG+AGG | 0.507251 | 5.3:+26365938 | MS.gene066289:CDS |
| CCTTACAAATCTTACTTCAA+GGG | 0.508856 | 5.3:+26366371 | MS.gene066289:CDS |
| AACAAGTCCAAATGATTATG+TGG | 0.518480 | 5.3:+26365743 | MS.gene066289:CDS |
| GGGTATGACACCTCCCATAT+GGG | 0.531392 | 5.3:+26366391 | MS.gene066289:CDS |
| TCTGAAGGGATCATTAACAT+AGG | 0.534709 | 5.3:-26365462 | None:intergenic |
| GCTGTGGCTCAAGTCATGGC+TGG | 0.535182 | 5.3:+26365571 | MS.gene066289:CDS |
| GATTTCACTAAATAAGTAAG+TGG | 0.538843 | 5.3:-26366011 | None:intergenic |
| AAAGGTGGCACAACCCATAT+GGG | 0.541900 | 5.3:-26366404 | None:intergenic |
| TGTCTAGCTTTCATAAAAGC+AGG | 0.542520 | 5.3:+26365792 | MS.gene066289:CDS |
| GCATACCATATAATTATCGA+TGG | 0.543157 | 5.3:-26365670 | None:intergenic |
| TTACGACTACAATGTGCATA+AGG | 0.543562 | 5.3:+26365698 | MS.gene066289:CDS |
| GGAATATATAACATAAAGCA+TGG | 0.549074 | 5.3:+26366329 | MS.gene066289:CDS |
| TATTTAGTGAAATCATTGGA+GGG | 0.549492 | 5.3:+26366020 | MS.gene066289:CDS |
| AAGTTGGAATTGAATGACAA+AGG | 0.553747 | 5.3:+26366119 | MS.gene066289:CDS |
| AATCAATTCCATTGAAAAGG+TGG | 0.555145 | 5.3:-26366419 | None:intergenic |
| GTTTGCCCAATCTCGCTCCA+TGG | 0.556567 | 5.3:-26365295 | None:intergenic |
| CGATAATTATATGGTATGCA+AGG | 0.558559 | 5.3:+26365674 | MS.gene066289:CDS |
| CCCATATCAAAAGGACCTCT+AGG | 0.561580 | 5.3:-26366308 | None:intergenic |
| TTATTTAGTGAAATCATTGG+AGG | 0.564804 | 5.3:+26366019 | MS.gene066289:CDS |
| GGAATTCTTTCCTCACCCCA+AGG | 0.565481 | 5.3:-26365948 | None:intergenic |
| ACGAAGAAGATGTCATCACT+TGG | 0.566470 | 5.3:+26365607 | MS.gene066289:CDS |
| CCTTGAAGTAAGATTTGTAA+GGG | 0.568583 | 5.3:-26366370 | None:intergenic |
| GGACCTCTAGGATAAGGAAC+CGG | 0.579650 | 5.3:-26366296 | None:intergenic |
| TAATTATTATAACGAAGTAC+CGG | 0.581850 | 5.3:+26366277 | MS.gene066289:CDS |
| ATCGACATTACATTCTACAA+TGG | 0.582494 | 5.3:+26365861 | MS.gene066289:CDS |
| GAATTCTTTCCTCACCCCAA+GGG | 0.583805 | 5.3:-26365947 | None:intergenic |
| TGGTGTATGCCGTAACTCGT+TGG | 0.604557 | 5.3:+26365886 | MS.gene066289:CDS |
| AATCATTGGAGGGAGAGTTG+TGG | 0.606251 | 5.3:+26366030 | MS.gene066289:CDS |
| AGATGCTGTGGCTCAAGTCA+TGG | 0.616921 | 5.3:+26365567 | MS.gene066289:CDS |
| ACCATATAATTATCGATGGG+TGG | 0.621050 | 5.3:-26365666 | None:intergenic |
| CTTAACAACAAGAGATGCTG+TGG | 0.621999 | 5.3:+26365555 | MS.gene066289:CDS |
| CGAAGAAGATGTCATCACTT+GGG | 0.623448 | 5.3:+26365608 | MS.gene066289:CDS |
| TTATGAAAGCTAGACAGCCA+CGG | 0.638641 | 5.3:-26365785 | None:intergenic |
| CATACCATATAATTATCGAT+GGG | 0.639231 | 5.3:-26365669 | None:intergenic |
| GTACCGGTTCCTTATCCTAG+AGG | 0.650762 | 5.3:+26366293 | MS.gene066289:CDS |
| AGGGTCAACAATATCAACAA+AGG | 0.663310 | 5.3:+26366074 | MS.gene066289:CDS |
| GCAGCAATTTACACTGACCG+TGG | 0.685734 | 5.3:+26365768 | MS.gene066289:CDS |
| ATTGGAGGGAGAGTTGTGGA+TGG | 0.690403 | 5.3:+26366034 | MS.gene066289:CDS |
| GGTGGCACAACCCATATGGG+AGG | 0.700789 | 5.3:-26366401 | None:intergenic |
| TGTTGTTCAAGTGACCCTTG+GGG | 0.723751 | 5.3:+26365933 | MS.gene066289:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTATAACGAAGTAC+CGG | + | chr5.3:26366277-26366296 | MS.gene066289:CDS | 20.0% |
| !! | TACTTATTTAGTGAAATCAT+TGG | + | chr5.3:26366016-26366035 | MS.gene066289:CDS | 20.0% |
| !! | TTATATATTCCCATATCAAA+AGG | - | chr5.3:26366320-26366339 | None:intergenic | 20.0% |
| !! | TTCTTTACATGTATTTAAGT+TGG | + | chr5.3:26366103-26366122 | MS.gene066289:CDS | 20.0% |
| ! | CATACCATATAATTATCGAT+GGG | - | chr5.3:26365672-26365691 | None:intergenic | 25.0% |
| ! | CTTCTTTGTAACAAAACATT+TGG | - | chr5.3:26365972-26365991 | None:intergenic | 25.0% |
| ! | GATTTCACTAAATAAGTAAG+TGG | - | chr5.3:26366014-26366033 | None:intergenic | 25.0% |
| ! | GGAATATATAACATAAAGCA+TGG | + | chr5.3:26366329-26366348 | MS.gene066289:CDS | 25.0% |
| ! | TATTTAGTGAAATCATTGGA+GGG | + | chr5.3:26366020-26366039 | MS.gene066289:CDS | 25.0% |
| ! | TTATTTAGTGAAATCATTGG+AGG | + | chr5.3:26366019-26366038 | MS.gene066289:CDS | 25.0% |
| !! | TTAAGCATTGTCAATTCTAA+TGG | - | chr5.3:26365540-26365559 | None:intergenic | 25.0% |
| !!! | AATATTTTATTTGTGGGTGA+TGG | + | chr5.3:26366185-26366204 | MS.gene066289:CDS | 25.0% |
| !!! | AATTTTTTTCCAACGAGTTA+CGG | - | chr5.3:26365898-26365917 | None:intergenic | 25.0% |
| !!! | AGGAGACAATATTTTATTTG+TGG | + | chr5.3:26366178-26366197 | MS.gene066289:CDS | 25.0% |
| !!! | GGAGACAATATTTTATTTGT+GGG | + | chr5.3:26366179-26366198 | MS.gene066289:CDS | 25.0% |
| !!! | TAATCATTTGGACTTGTTAT+AGG | - | chr5.3:26365741-26365760 | None:intergenic | 25.0% |
| AACAAGTCCAAATGATTATG+TGG | + | chr5.3:26365743-26365762 | MS.gene066289:CDS | 30.0% | |
| AAGTTGGAATTGAATGACAA+AGG | + | chr5.3:26366119-26366138 | MS.gene066289:CDS | 30.0% | |
| ATCGACATTACATTCTACAA+TGG | + | chr5.3:26365861-26365880 | MS.gene066289:CDS | 30.0% | |
| CATTACATTCTACAATGGTT+TGG | + | chr5.3:26365866-26365885 | MS.gene066289:CDS | 30.0% | |
| CCTTACAAATCTTACTTCAA+GGG | + | chr5.3:26366371-26366390 | MS.gene066289:CDS | 30.0% | |
| CCTTGAAGTAAGATTTGTAA+GGG | - | chr5.3:26366373-26366392 | None:intergenic | 30.0% | |
| CGATAATTATATGGTATGCA+AGG | + | chr5.3:26365674-26365693 | MS.gene066289:CDS | 30.0% | |
| GCATACCATATAATTATCGA+TGG | - | chr5.3:26365673-26365692 | None:intergenic | 30.0% | |
| GCATTATATTGCTCCTAAAT+TGG | - | chr5.3:26365443-26365462 | None:intergenic | 30.0% | |
| GGTGAGAAGGTTTATAAATA+GGG | + | chr5.3:26366055-26366074 | MS.gene066289:CDS | 30.0% | |
| TGGTGAGAAGGTTTATAAAT+AGG | + | chr5.3:26366054-26366073 | MS.gene066289:CDS | 30.0% | |
| TTGAACCAATTGATCACATT+TGG | + | chr5.3:26365358-26365377 | MS.gene066289:CDS | 30.0% | |
| TTTCTCGAGTTATCTACAAA+AGG | + | chr5.3:26366235-26366254 | MS.gene066289:CDS | 30.0% | |
| AACATAAAGCATGGAAGCTT+GGG | + | chr5.3:26366338-26366357 | MS.gene066289:CDS | 35.0% | |
| AATGGATACACTCTATTTGC+AGG | - | chr5.3:26365522-26365541 | None:intergenic | 35.0% | |
| ACCATATAATTATCGATGGG+TGG | - | chr5.3:26365669-26365688 | None:intergenic | 35.0% | |
| AGGGTCAACAATATCAACAA+AGG | + | chr5.3:26366074-26366093 | MS.gene066289:CDS | 35.0% | |
| ATAGGAGCAACATCCTTAAA+TGG | - | chr5.3:26365639-26365658 | None:intergenic | 35.0% | |
| ATCAACACGATCACCAATTT+AGG | + | chr5.3:26365427-26365446 | MS.gene066289:CDS | 35.0% | |
| CCAAACCAAATGTGATCAAT+TGG | - | chr5.3:26365366-26365385 | None:intergenic | 35.0% | |
| CCAATTGATCACATTTGGTT+TGG | + | chr5.3:26365363-26365382 | MS.gene066289:CDS | 35.0% | |
| CCCTTACAAATCTTACTTCA+AGG | + | chr5.3:26366370-26366389 | MS.gene066289:CDS | 35.0% | |
| CCCTTGAAGTAAGATTTGTA+AGG | - | chr5.3:26366374-26366393 | None:intergenic | 35.0% | |
| TAACATAAAGCATGGAAGCT+TGG | + | chr5.3:26366337-26366356 | MS.gene066289:CDS | 35.0% | |
| TCTGAAGGGATCATTAACAT+AGG | - | chr5.3:26365465-26365484 | None:intergenic | 35.0% | |
| TTACGACTACAATGTGCATA+AGG | + | chr5.3:26365698-26365717 | MS.gene066289:CDS | 35.0% | |
| ! | ATACAAGACACTGACGATTT+TGG | + | chr5.3:26365834-26365853 | MS.gene066289:CDS | 35.0% |
| ! | TAAAAGCAGGACAAGAGTTT+TGG | + | chr5.3:26365805-26365824 | MS.gene066289:CDS | 35.0% |
| ! | TTTCTGGACTGTTTTCTGAA+GGG | - | chr5.3:26365479-26365498 | None:intergenic | 35.0% |
| ! | TTTTCTGGACTGTTTTCTGA+AGG | - | chr5.3:26365480-26365499 | None:intergenic | 35.0% |
| !! | CTATACAAACATCGCTTTTC+TGG | - | chr5.3:26365495-26365514 | None:intergenic | 35.0% |
| !! | TGTCTAGCTTTCATAAAAGC+AGG | + | chr5.3:26365792-26365811 | MS.gene066289:CDS | 35.0% |
| !! | TTGGTTCTGTCTGCAAAAAT+TGG | + | chr5.3:26365382-26365401 | MS.gene066289:CDS | 35.0% |
| ACGAAGAAGATGTCATCACT+TGG | + | chr5.3:26365607-26365626 | MS.gene066289:CDS | 40.0% | |
| CACTTGGGAGAATCCATTTA+AGG | + | chr5.3:26365623-26365642 | MS.gene066289:CDS | 40.0% | |
| CGAAGAAGATGTCATCACTT+GGG | + | chr5.3:26365608-26365627 | MS.gene066289:CDS | 40.0% | |
| CTTAACAACAAGAGATGCTG+TGG | + | chr5.3:26365555-26365574 | MS.gene066289:CDS | 40.0% | |
| GCCACCCATCGATAATTATA+TGG | + | chr5.3:26365665-26365684 | MS.gene066289:CDS | 40.0% | |
| GCTGCAACCACATAATCATT+TGG | - | chr5.3:26365753-26365772 | None:intergenic | 40.0% | |
| TTATGAAAGCTAGACAGCCA+CGG | - | chr5.3:26365788-26365807 | None:intergenic | 40.0% | |
| TTGTCGAGACTTGAGAGTTT+AGG | + | chr5.3:26366158-26366177 | MS.gene066289:CDS | 40.0% | |
| ! | CCTAGAGGTCCTTTTGATAT+GGG | + | chr5.3:26366308-26366327 | MS.gene066289:CDS | 40.0% |
| ! | TCCTAGAGGTCCTTTTGATA+TGG | + | chr5.3:26366307-26366326 | MS.gene066289:CDS | 40.0% |
| ! | TTGTTGTTCAAGTGACCCTT+GGG | + | chr5.3:26365932-26365951 | MS.gene066289:CDS | 40.0% |
| !! | TCAAAAGGACCTCTAGGATA+AGG | - | chr5.3:26366305-26366324 | None:intergenic | 40.0% |
| !! | TTTGTTGTTCAAGTGACCCT+TGG | + | chr5.3:26365931-26365950 | MS.gene066289:CDS | 40.0% |
| AAAAGGTGGCACAACCCATA+TGG | - | chr5.3:26366408-26366427 | None:intergenic | 45.0% | |
| AAAGGTGGCACAACCCATAT+GGG | - | chr5.3:26366407-26366426 | None:intergenic | 45.0% | |
| AATCATTGGAGGGAGAGTTG+TGG | + | chr5.3:26366030-26366049 | MS.gene066289:CDS | 45.0% | |
| CCCATATCAAAAGGACCTCT+AGG | - | chr5.3:26366311-26366330 | None:intergenic | 45.0% | |
| GAATTCTTTCCTCACCCCAA+GGG | - | chr5.3:26365950-26365969 | None:intergenic | 45.0% | |
| TCGATGGGTGGCAAACTAAT+AGG | - | chr5.3:26365657-26365676 | None:intergenic | 45.0% | |
| TGTTGTTCAAGTGACCCTTG+GGG | + | chr5.3:26365933-26365952 | MS.gene066289:CDS | 45.0% | |
| AGATGCTGTGGCTCAAGTCA+TGG | + | chr5.3:26365567-26365586 | MS.gene066289:CDS | 50.0% | |
| AGGGTATGACACCTCCCATA+TGG | + | chr5.3:26366390-26366409 | MS.gene066289:CDS | 50.0% | |
| ATTGGAGGGAGAGTTGTGGA+TGG | + | chr5.3:26366034-26366053 | MS.gene066289:CDS | 50.0% | |
| GAGAGTTGTGGATGGTGAGA+AGG | + | chr5.3:26366042-26366061 | MS.gene066289:CDS | 50.0% | |
| GCAGCAATTTACACTGACCG+TGG | + | chr5.3:26365768-26365787 | MS.gene066289:CDS | 50.0% | |
| GGAATTCTTTCCTCACCCCA+AGG | - | chr5.3:26365951-26365970 | None:intergenic | 50.0% | |
| GGGTATGACACCTCCCATAT+GGG | + | chr5.3:26366391-26366410 | MS.gene066289:CDS | 50.0% | |
| TGGTGTATGCCGTAACTCGT+TGG | + | chr5.3:26365886-26365905 | MS.gene066289:CDS | 50.0% | |
| ! | GGGTTGTGCCACCTTTTCAA+TGG | + | chr5.3:26366411-26366430 | MS.gene066289:CDS | 50.0% |
| !! | GGACCTCTAGGATAAGGAAC+CGG | - | chr5.3:26366299-26366318 | None:intergenic | 50.0% |
| !! | GTACCGGTTCCTTATCCTAG+AGG | + | chr5.3:26366293-26366312 | MS.gene066289:CDS | 50.0% |
| TTCAAGTGACCCTTGGGGTG+AGG | + | chr5.3:26365938-26365957 | MS.gene066289:CDS | 55.0% | |
| GCTGTGGCTCAAGTCATGGC+TGG | + | chr5.3:26365571-26365590 | MS.gene066289:CDS | 60.0% | |
| GGTGGCACAACCCATATGGG+AGG | - | chr5.3:26366404-26366423 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 26365297 | 26366439 | 26365297 | ID=MS.gene066289 |
| chr5.3 | mRNA | 26365297 | 26366439 | 26365297 | ID=MS.gene066289.t1;Parent=MS.gene066289 |
| chr5.3 | exon | 26365297 | 26366439 | 26365297 | ID=MS.gene066289.t1.exon1;Parent=MS.gene066289.t1 |
| chr5.3 | CDS | 26365297 | 26366439 | 26365297 | ID=cds.MS.gene066289.t1;Parent=MS.gene066289.t1 |
| Gene Sequence |
| Protein sequence |
